Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233430 | XP_003627159.1 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233430 | sp|Q9CAI5|CKL2_ARATH | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233430 | G7LI85 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1233430 | Msa1275740 | 0.845334 | 4.334096e-59 | -8.615850e-47 |
| Msa1195260 | Msa1233430 | 0.997545 | 1.749888e-244 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233430 | MtrunA17_Chr8g0342821 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| Msa1233430 | MtrunA17_Chr2g0329981 | 83.438 | 477 | 74 | 5 | 1 | 474 | 1 | 475 | 0.0 | 809 |
| Msa1233430 | MtrunA17_Chr4g0071031 | 75.314 | 478 | 90 | 7 | 1 | 474 | 1 | 454 | 0.0 | 690 |
| Msa1233430 | MtrunA17_Chr2g0299661 | 68.723 | 470 | 142 | 4 | 1 | 469 | 1 | 466 | 0.0 | 653 |
| Msa1233430 | MtrunA17_Chr1g0183631 | 60.000 | 475 | 155 | 8 | 1 | 465 | 1 | 450 | 0.0 | 547 |
| Msa1233430 | MtrunA17_Chr7g0261501 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 540 |
| Msa1233430 | MtrunA17_Chr1g0166821 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
| Msa1233430 | MtrunA17_Chr1g0187571 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 519 |
| Msa1233430 | MtrunA17_Chr6g0486611 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.04e-178 | 507 |
| Msa1233430 | MtrunA17_Chr8g0390211 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.41e-174 | 496 |
| Msa1233430 | MtrunA17_Chr3g0140071 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 3.41e-162 | 465 |
| Msa1233430 | MtrunA17_Chr1g0167261 | 71.000 | 300 | 84 | 2 | 1 | 297 | 2 | 301 | 1.81e-161 | 460 |
| Msa1233430 | MtrunA17_Chr1g0146151 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 3.62e-160 | 460 |
| Msa1233430 | MtrunA17_Chr7g0214531 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 5.25e-57 | 199 |
| Msa1233430 | MtrunA17_Chr3g0140431 | 38.951 | 267 | 151 | 6 | 9 | 266 | 38 | 301 | 8.03e-57 | 198 |
| Msa1233430 | MtrunA17_Chr1g0146301 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 2.65e-56 | 198 |
| Msa1233430 | MtrunA17_Chr1g0213321 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 8.86e-56 | 197 |
| Msa1233430 | MtrunA17_Chr7g0253211 | 38.542 | 288 | 158 | 7 | 4 | 275 | 317 | 601 | 2.73e-55 | 198 |
| Msa1233430 | MtrunA17_Chr8g0340491 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.24e-50 | 182 |
| Msa1233430 | MtrunA17_Chr5g0405421 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.08e-13 | 73.2 |
| Msa1233430 | MtrunA17_Chr3g0107011 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 1.06e-11 | 66.6 |
| Msa1233430 | MtrunA17_Chr3g0123141 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 5.80e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233430 | AT1G72710.1 | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| Msa1233430 | AT4G26100.1 | 69.979 | 473 | 112 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
| Msa1233430 | AT5G57015.1 | 69.538 | 476 | 101 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
| Msa1233430 | AT2G19470.1 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 573 |
| Msa1233430 | AT1G03930.1 | 60.970 | 474 | 173 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
| Msa1233430 | AT5G44100.1 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1233430 | AT5G44100.2 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| Msa1233430 | AT3G23340.1 | 64.096 | 415 | 135 | 6 | 1 | 414 | 1 | 402 | 0.0 | 531 |
| Msa1233430 | AT4G28540.1 | 73.620 | 326 | 78 | 2 | 1 | 318 | 5 | 330 | 0.0 | 520 |
| Msa1233430 | AT4G14340.1 | 63.260 | 411 | 137 | 5 | 1 | 410 | 7 | 404 | 0.0 | 519 |
| Msa1233430 | AT5G43320.1 | 56.495 | 485 | 186 | 9 | 1 | 469 | 1 | 476 | 0.0 | 517 |
| Msa1233430 | AT4G14340.2 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
| Msa1233430 | AT1G04440.1 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 3.31e-179 | 510 |
| Msa1233430 | AT5G43320.2 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.97e-177 | 501 |
| Msa1233430 | AT5G43320.3 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.97e-177 | 501 |
| Msa1233430 | AT4G28880.3 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1233430 | AT4G28880.2 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1233430 | AT4G28880.1 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1233430 | AT4G28880.4 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.78e-176 | 499 |
| Msa1233430 | AT3G23340.2 | 63.291 | 395 | 131 | 6 | 21 | 414 | 7 | 388 | 7.36e-175 | 498 |
| Msa1233430 | AT4G28860.2 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 3.19e-172 | 489 |
| Msa1233430 | AT4G28860.1 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 1.42e-171 | 489 |
| Msa1233430 | AT4G08800.1 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.26e-153 | 437 |
| Msa1233430 | AT2G25760.2 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 4.36e-61 | 211 |
| Msa1233430 | AT2G25760.1 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.71e-58 | 203 |
| Msa1233430 | AT3G03940.1 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.44e-56 | 198 |
| Msa1233430 | AT5G18190.2 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.07e-56 | 198 |
| Msa1233430 | AT5G18190.1 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 5.07e-56 | 198 |
| Msa1233430 | AT3G13670.1 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.30e-54 | 194 |
| Msa1233430 | AT2G17890.1 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 7.89e-13 | 71.2 |
| Msa1233430 | AT3G50530.1 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 6.96e-12 | 68.2 |
| Msa1233430 | AT5G39440.1 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.70e-11 | 66.2 |
| Msa1233430 | AT3G06030.1 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.62e-11 | 65.1 |
| Msa1233430 | AT3G29160.3 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.83e-11 | 64.3 |
| Msa1233430 | AT4G36070.1 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.50e-11 | 64.3 |
| Msa1233430 | AT4G36070.2 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.61e-11 | 64.3 |
Find 148 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCAAACATAAATAATT+TGG | 0.143188 | 8_2:-10202598 | Msa1233430:CDS |
| TTTCTTTATTGTATACTTAT+AGG | 0.154065 | 8_2:+10202379 | None:intergenic |
| GAAGAAGAAAAGGGTATATC+TGG | 0.226962 | 8_2:+10206889 | None:intergenic |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8_2:-10205473 | Msa1233430:CDS |
| TAACACATGCATACAATTAA+TGG | 0.233781 | 8_2:+10201869 | None:intergenic |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8_2:-10205676 | Msa1233430:CDS |
| ATTTGATTATTAATTAATTA+AGG | 0.249420 | 8_2:+10207052 | None:intergenic |
| TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8_2:+10206639 | None:intergenic |
| GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8_2:-10203126 | Msa1233430:CDS |
| CATATCATTGTGAACTATAT+CGG | 0.303394 | 8_2:-10202215 | Msa1233430:three_prime_UTR |
| AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8_2:-10206765 | Msa1233430:CDS |
| CTCACGCTGGATTCAAGTTT+AGG | 0.327718 | 8_2:-10202702 | Msa1233430:CDS |
| TATCTGGGAAATGCTGAAAA+AGG | 0.327889 | 8_2:+10206905 | None:intergenic |
| CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8_2:-10203373 | Msa1233430:CDS |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8_2:-10205472 | Msa1233430:CDS |
| TCACATGTAAGCTTGATCTT+TGG | 0.350873 | 8_2:+10202053 | None:intergenic |
| AACAAAACTAGCCTCGTAAA+AGG | 0.358968 | 8_2:-10202336 | Msa1233430:three_prime_UTR |
| GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8_2:-10203125 | Msa1233430:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8_2:-10204300 | Msa1233430:intron |
| ACAATAAAGAAAATATGTTT+TGG | 0.374535 | 8_2:-10202368 | Msa1233430:three_prime_UTR |
| ATTAAACCCTAATTGAAAAT+CGG | 0.386169 | 8_2:+10206825 | None:intergenic |
| ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8_2:+10203823 | None:intergenic |
| TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8_2:-10204055 | Msa1233430:intron |
| TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8_2:-10202809 | Msa1233430:CDS |
| CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8_2:-10203385 | Msa1233430:intron |
| CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8_2:-10203833 | Msa1233430:CDS |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8_2:+10203550 | None:intergenic |
| CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8_2:+10203754 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8_2:-10206810 | Msa1233430:exon |
| ATATCATTGTGAACTATATC+GGG | 0.417397 | 8_2:-10202214 | Msa1233430:three_prime_UTR |
| ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8_2:+10205276 | None:intergenic |
| TCAGAATTTACAAGGAAGAA+AGG | 0.421192 | 8_2:+10202496 | None:intergenic |
| ACTGGAATGGAGCGAGTAAC+GGG | 0.428025 | 8_2:-10202029 | Msa1233430:three_prime_UTR |
| AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8_2:-10202582 | Msa1233430:CDS |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8_2:-10204306 | Msa1233430:CDS |
| AAGATTCCATCATTAGCAAT+AGG | 0.437123 | 8_2:+10203063 | None:intergenic |
| TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8_2:-10206791 | Msa1233430:CDS |
| CGTCATCGTAGAAGAAGAAA+AGG | 0.445616 | 8_2:+10206879 | None:intergenic |
| GACAAAATATCTTGTGTAAG+TGG | 0.446487 | 8_2:-10201894 | Msa1233430:three_prime_UTR |
| ACACCGGACCATTTCACATT+CGG | 0.447768 | 8_2:+10205752 | None:intergenic |
| CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8_2:+10203005 | None:intergenic |
| ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8_2:+10205928 | None:intergenic |
| TCTTATGCTTGCCGATCAAA+TGG | 0.457248 | 8_2:-10205633 | Msa1233430:intron |
| AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8_2:-10203548 | Msa1233430:CDS |
| TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8_2:+10205920 | None:intergenic |
| TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8_2:-10203069 | Msa1233430:CDS |
| TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8_2:+10205921 | None:intergenic |
| ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8_2:-10205713 | Msa1233430:CDS |
| CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8_2:-10203024 | Msa1233430:CDS |
| GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8_2:-10203983 | Msa1233430:intron |
| CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8_2:-10205760 | Msa1233430:CDS |
| GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8_2:-10203334 | Msa1233430:intron |
| GTGTTTGTAATTTGTTGTAA+TGG | 0.486115 | 8_2:-10201945 | Msa1233430:three_prime_UTR |
| CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8_2:-10203087 | Msa1233430:CDS |
| CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8_2:+10203024 | None:intergenic |
| ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8_2:-10206792 | Msa1233430:CDS |
| GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8_2:-10202627 | Msa1233430:CDS |
| CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8_2:+10203025 | None:intergenic |
| CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8_2:-10203343 | Msa1233430:CDS |
| AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8_2:-10204180 | Msa1233430:CDS |
| GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8_2:-10204059 | Msa1233430:intron |
| TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8_2:-10202801 | Msa1233430:CDS |
| CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8_2:-10205290 | Msa1233430:intron |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8_2:-10205699 | Msa1233430:CDS |
| CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8_2:+10206798 | None:intergenic |
| ATCAAGCTTACATGTGAGAC+TGG | 0.504186 | 8_2:-10202047 | Msa1233430:three_prime_UTR |
| TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8_2:+10202619 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8_2:-10205479 | Msa1233430:CDS |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8_2:-10205339 | Msa1233430:CDS |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8_2:+10205689 | None:intergenic |
| CTCCTCTCGTCCTCTCACGC+TGG | 0.525433 | 8_2:-10202715 | Msa1233430:CDS |
| AAGAAGAAAAGGGTATATCT+GGG | 0.527099 | 8_2:+10206890 | None:intergenic |
| GACTGGAATGGAGCGAGTAA+CGG | 0.528568 | 8_2:-10202030 | Msa1233430:three_prime_UTR |
| GTTTCTCTCTACTGTAATTG+TGG | 0.528903 | 8_2:-10202093 | Msa1233430:three_prime_UTR |
| AAGAAAACAAATGATAGTAA+AGG | 0.529240 | 8_2:+10202269 | None:intergenic |
| TCTTCCTTGTAAATTCTGAA+AGG | 0.531260 | 8_2:-10202492 | Msa1233430:three_prime_UTR |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8_2:+10205476 | None:intergenic |
| GGAGCAGTCCGTAAAAGCTC+TGG | 0.533818 | 8_2:-10202681 | Msa1233430:CDS |
| AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8_2:-10203007 | Msa1233430:intron |
| TAAACCTTTCAGAATTTACA+AGG | 0.541737 | 8_2:+10202488 | None:intergenic |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8_2:-10205480 | Msa1233430:CDS |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8_2:+10205690 | None:intergenic |
| TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8_2:-10204054 | Msa1233430:intron |
| AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8_2:+10203745 | None:intergenic |
| CAGCGTGAGAGGACGAGAGG+AGG | 0.553851 | 8_2:+10202716 | None:intergenic |
| CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8_2:-10203759 | Msa1233430:intron |
| CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8_2:-10204343 | Msa1233430:CDS |
| AGCGTGAGAGGACGAGAGGA+GGG | 0.556937 | 8_2:+10202717 | None:intergenic |
| GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8_2:+10203845 | None:intergenic |
| TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8_2:-10203138 | Msa1233430:intron |
| GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8_2:-10205746 | Msa1233430:CDS |
| AAACTTGAATCCAGCGTGAG+AGG | 0.575553 | 8_2:+10202705 | None:intergenic |
| TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8_2:+10203086 | None:intergenic |
| AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8_2:-10202649 | Msa1233430:CDS |
| AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8_2:-10205723 | Msa1233430:CDS |
| AGCAGCCGTGATGCAGCTGT+TGG | 0.579930 | 8_2:-10202753 | Msa1233430:CDS |
| ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8_2:+10203071 | None:intergenic |
| AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8_2:+10205622 | None:intergenic |
| CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8_2:-10204042 | Msa1233430:CDS |
| AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8_2:-10204342 | Msa1233430:CDS |
| CTTTGCTAGTCTCTCTGCCG+TGG | 0.586144 | 8_2:-10203873 | Msa1233430:intron |
| CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8_2:-10204200 | Msa1233430:intron |
| TTGATCGGCAAGCATAAGAA+CGG | 0.592423 | 8_2:+10205637 | None:intergenic |
| ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8_2:-10205755 | Msa1233430:CDS |
| GCTTACATGTGAGACTGGAA+TGG | 0.595249 | 8_2:-10202042 | Msa1233430:three_prime_UTR |
| ACCATCACTTACAATACCAC+GGG | 0.602147 | 8_2:+10203482 | None:intergenic |
| TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8_2:-10204199 | Msa1233430:intron |
| CACCATCACTTACAATACCA+CGG | 0.605886 | 8_2:+10203481 | None:intergenic |
| GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8_2:+10203026 | None:intergenic |
| GTCTGCATTTAAACGATGAG+AGG | 0.609688 | 8_2:-10202551 | Msa1233430:CDS |
| CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8_2:-10203098 | Msa1233430:CDS |
| AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8_2:-10205899 | Msa1233430:CDS |
| ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8_2:-10203498 | Msa1233430:CDS |
| TCACAAAGTGCGGAGTGGAG+TGG | 0.616198 | 8_2:-10202456 | Msa1233430:three_prime_UTR |
| CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8_2:+10204042 | None:intergenic |
| CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8_2:+10203087 | None:intergenic |
| ATCCAGCGTGAGAGGACGAG+AGG | 0.620493 | 8_2:+10202713 | None:intergenic |
| TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8_2:-10203824 | Msa1233430:CDS |
| TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8_2:-10202791 | Msa1233430:CDS |
| TGCAGCTGTTGGCAGTGAGA+CGG | 0.627439 | 8_2:-10202742 | Msa1233430:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8_2:-10205469 | Msa1233430:CDS |
| CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8_2:+10203489 | None:intergenic |
| AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8_2:+10203494 | None:intergenic |
| TCTGCATTTAAACGATGAGA+GGG | 0.635819 | 8_2:-10202550 | Msa1233430:CDS |
| AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8_2:+10203846 | None:intergenic |
| GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8_2:+10204184 | None:intergenic |
| TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8_2:-10202786 | Msa1233430:CDS |
| TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8_2:+10203346 | None:intergenic |
| TACAGTAGAGAGAAACGCGG+TGG | 0.641361 | 8_2:+10202100 | None:intergenic |
| GTCATCGTAGAAGAAGAAAA+GGG | 0.644208 | 8_2:+10206880 | None:intergenic |
| TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8_2:-10203134 | Msa1233430:CDS |
| ACAGTAGAGAGAAACGCGGT+GGG | 0.646446 | 8_2:+10202101 | None:intergenic |
| GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8_2:+10203361 | None:intergenic |
| GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8_2:+10205736 | None:intergenic |
| CACTGCCAACAGCTGCATCA+CGG | 0.650486 | 8_2:+10202748 | None:intergenic |
| TATCATTGTGAACTATATCG+GGG | 0.650629 | 8_2:-10202213 | Msa1233430:three_prime_UTR |
| ATCATTGTGAACTATATCGG+GGG | 0.657737 | 8_2:-10202212 | Msa1233430:three_prime_UTR |
| CTGGAATGGAGCGAGTAACG+GGG | 0.663375 | 8_2:-10202028 | Msa1233430:three_prime_UTR |
| GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8_2:+10205711 | None:intergenic |
| TCACTTACAATACCACGGGA+AGG | 0.675431 | 8_2:+10203486 | None:intergenic |
| CAAATTCTGAGGGATAGCCA+CGG | 0.686783 | 8_2:+10203856 | None:intergenic |
| ACAACAAATTACAAACACAA+CGG | 0.687735 | 8_2:+10201950 | None:intergenic |
| GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8_2:-10205750 | Msa1233430:CDS |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8_2:+10205465 | None:intergenic |
| AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8_2:-10203122 | Msa1233430:CDS |
| CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8_2:-10205896 | Msa1233430:CDS |
| TATGCTTTATATCATCCCTG+AGG | 0.757607 | 8_2:+10202234 | None:intergenic |
| AATTACAGTAGAGAGAAACG+CGG | 0.835990 | 8_2:+10202097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCTTTTGAATTTT+TGG | - | chr8_2:10202333-10202352 | Msa1233430:three_prime_UTR | 10.0% |
| !!! | TCCTATTTATATTTTATTTT+TGG | - | chr8_2:10205167-10205186 | Msa1233430:intron | 10.0% |
| !! | TCCAAAAATAAAATATAAAT+AGG | + | chr8_2:10205171-10205190 | None:intergenic | 10.0% |
| !!! | TTAAGTTATTTAATTTTTAG+TGG | - | chr8_2:10205467-10205486 | Msa1233430:CDS | 10.0% |
| !!! | AATATTTTTCATTTTCTTAA+CGG | + | chr8_2:10207053-10207072 | None:intergenic | 10.0% |
| !!! | TCATTTTCTTTTTCAAAATT+CGG | + | chr8_2:10202299-10202318 | None:intergenic | 15.0% |
| !! | AAATAAAGTAATGATTGATT+AGG | - | chr8_2:10202662-10202681 | Msa1233430:CDS | 15.0% |
| !! | TAAATTTACAAACTGATATT+TGG | - | chr8_2:10202742-10202761 | Msa1233430:CDS | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | - | chr8_2:10203213-10203232 | Msa1233430:intron | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | - | chr8_2:10203723-10203742 | Msa1233430:intron | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | - | chr8_2:10204102-10204121 | Msa1233430:intron | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | + | chr8_2:10204110-10204129 | None:intergenic | 15.0% |
| !! | AAAAACTAATTGATACTTAA+TGG | + | chr8_2:10204231-10204250 | None:intergenic | 15.0% |
| !! | GTGAATAAAAAGTTATTAAA+AGG | - | chr8_2:10204325-10204344 | Msa1233430:CDS | 15.0% |
| !!! | AATGATTTTAAAAGACATAA+TGG | + | chr8_2:10204978-10204997 | None:intergenic | 15.0% |
| !! | AAAATATAAATAGGAAAACA+AGG | + | chr8_2:10205162-10205181 | None:intergenic | 15.0% |
| !! | TTTCTTTATTGTATACTTAT+AGG | + | chr8_2:10206513-10206532 | None:intergenic | 15.0% |
| !!! | ACAATAAAGAAAATATGTTT+TGG | - | chr8_2:10206521-10206540 | Msa1233430:intron | 15.0% |
| !! | GTTAAGAAAATGAAAAATAT+TGG | - | chr8_2:10207052-10207071 | Msa1233430:five_prime_UTR | 15.0% |
| !! | ATTAAACCCTAATTGAAAAT+CGG | + | chr8_2:10202067-10202086 | None:intergenic | 20.0% |
| !!! | TTTTTGTTGTTGTGAATTTT+AGG | - | chr8_2:10202198-10202217 | Msa1233430:three_prime_UTR | 20.0% |
| !!! | TTTTGTTGTTGTGAATTTTA+GGG | - | chr8_2:10202199-10202218 | Msa1233430:three_prime_UTR | 20.0% |
| !!! | CATTTTCTTTTTCAAAATTC+GGG | + | chr8_2:10202298-10202317 | None:intergenic | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | + | chr8_2:10202371-10202390 | None:intergenic | 20.0% |
| !! | AAACAAAGAGTTGTATATAT+GGG | - | chr8_2:10202465-10202484 | Msa1233430:three_prime_UTR | 20.0% |
| !!! | ATTTTTGTTTTGTTTGATTC+AGG | - | chr8_2:10202926-10202945 | Msa1233430:intron | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | + | chr8_2:10204067-10204086 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | + | chr8_2:10204163-10204182 | None:intergenic | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | - | chr8_2:10204349-10204368 | Msa1233430:intron | 20.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | + | chr8_2:10204428-10204447 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | - | chr8_2:10204736-10204755 | Msa1233430:intron | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | - | chr8_2:10204740-10204759 | Msa1233430:intron | 20.0% |
| !! | TGTCAAATGCTAAATAATAA+AGG | + | chr8_2:10204780-10204799 | None:intergenic | 20.0% |
| !!! | CATTTGACATATCTTTTAAT+TGG | - | chr8_2:10204791-10204810 | Msa1233430:intron | 20.0% |
| !!! | TTTAAAATCATTGTTGATTG+TGG | - | chr8_2:10204986-10205005 | Msa1233430:intron | 20.0% |
| !!! | TTAAAATCATTGTTGATTGT+GGG | - | chr8_2:10204987-10205006 | Msa1233430:intron | 20.0% |
| !!! | TTTTTTCTTTGTCATAGTTT+AGG | - | chr8_2:10205254-10205273 | Msa1233430:intron | 20.0% |
| !! | TAACAAATGAAAATCATTCA+AGG | + | chr8_2:10205704-10205723 | None:intergenic | 20.0% |
| !! | CACATCAAACATAAATAATT+TGG | - | chr8_2:10206291-10206310 | Msa1233430:intron | 20.0% |
| !!! | ATAAAGAAAATATGTTTTGG+TGG | - | chr8_2:10206524-10206543 | Msa1233430:intron | 20.0% |
| !! | AAGAAAACAAATGATAGTAA+AGG | + | chr8_2:10206623-10206642 | None:intergenic | 20.0% |
| !! | TTCAATTCCGATTTTCAATT+AGG | - | chr8_2:10202057-10202076 | Msa1233430:three_prime_UTR | 25.0% |
| !! | TCAATTCCGATTTTCAATTA+GGG | - | chr8_2:10202058-10202077 | Msa1233430:three_prime_UTR | 25.0% |
| !! | GATTTTCAATTAGGGTTTAA+TGG | - | chr8_2:10202066-10202085 | Msa1233430:three_prime_UTR | 25.0% |
| ! | ATCACAAAAATGCAAGAAAT+TGG | + | chr8_2:10202177-10202196 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | - | chr8_2:10202225-10202244 | Msa1233430:three_prime_UTR | 25.0% |
| ! | TTCTTCATTTGTCTGAATAT+TGG | + | chr8_2:10202253-10202272 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | - | chr8_2:10202384-10202403 | Msa1233430:three_prime_UTR | 25.0% |
| ! | GAAACAAAGAGTTGTATATA+TGG | - | chr8_2:10202464-10202483 | Msa1233430:three_prime_UTR | 25.0% |
| ! | TATGGGATATTGAATTTCAT+TGG | - | chr8_2:10202482-10202501 | Msa1233430:three_prime_UTR | 25.0% |
| ! | TCAGTTAAGTTAATGATTAC+TGG | - | chr8_2:10202635-10202654 | Msa1233430:CDS | 25.0% |
| ! | TATAACTTCAAATACCAAAC+CGG | + | chr8_2:10202700-10202719 | None:intergenic | 25.0% |
| ! | ATACACAAATTCACTAAGTT+GGG | + | chr8_2:10203028-10203047 | None:intergenic | 25.0% |
| ! | AATACACAAATTCACTAAGT+TGG | + | chr8_2:10203029-10203048 | None:intergenic | 25.0% |
| !! | CTTAGTGAATTTGTGTATTT+TGG | - | chr8_2:10203030-10203049 | Msa1233430:CDS | 25.0% |
| !!! | TTGGCTTAAATGTTTTTTGT+TGG | - | chr8_2:10203088-10203107 | Msa1233430:CDS | 25.0% |
| !!! | TGGCTTAAATGTTTTTTGTT+GGG | - | chr8_2:10203089-10203108 | Msa1233430:CDS | 25.0% |
| ! | TTGAGACATTATAAGAAAAC+TGG | + | chr8_2:10203322-10203341 | None:intergenic | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | - | chr8_2:10203381-10203400 | Msa1233430:intron | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | - | chr8_2:10203642-10203661 | Msa1233430:intron | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | + | chr8_2:10203708-10203727 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | + | chr8_2:10203709-10203728 | None:intergenic | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | - | chr8_2:10204149-10204168 | Msa1233430:intron | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | + | chr8_2:10204361-10204380 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | - | chr8_2:10204358-10204377 | Msa1233430:intron | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | + | chr8_2:10204644-10204663 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | + | chr8_2:10204645-10204664 | None:intergenic | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | + | chr8_2:10204658-10204677 | None:intergenic | 25.0% |
| ! | ATTGGATACTCTTTCTTATT+TGG | - | chr8_2:10204809-10204828 | Msa1233430:intron | 25.0% |
| ! | AAAGAGAAGTTAAAACAACA+AGG | + | chr8_2:10205584-10205603 | None:intergenic | 25.0% |
| ! | TCCAACATCATATATGATTA+AGG | - | chr8_2:10206029-10206048 | Msa1233430:intron | 25.0% |
| ! | TCCTTAATCATATATGATGT+TGG | + | chr8_2:10206033-10206052 | None:intergenic | 25.0% |
| ! | TAAACCTTTCAGAATTTACA+AGG | + | chr8_2:10206404-10206423 | None:intergenic | 25.0% |
| ! | AGGTTACGAAAAATATTCAT+CGG | + | chr8_2:10206603-10206622 | None:intergenic | 25.0% |
| ! | CATATCATTGTGAACTATAT+CGG | - | chr8_2:10206674-10206693 | Msa1233430:intron | 25.0% |
| ! | ATATCATTGTGAACTATATC+GGG | - | chr8_2:10206675-10206694 | Msa1233430:intron | 25.0% |
| ! | ACAACAAATTACAAACACAA+CGG | + | chr8_2:10206942-10206961 | None:intergenic | 25.0% |
| !!! | GTGTTTGTAATTTGTTGTAA+TGG | - | chr8_2:10206944-10206963 | Msa1233430:five_prime_UTR | 25.0% |
| ! | TAACACATGCATACAATTAA+TGG | + | chr8_2:10207023-10207042 | None:intergenic | 25.0% |
| !! | ATTTTTCATTTTCTTAACGG+TGG | + | chr8_2:10207050-10207069 | None:intergenic | 25.0% |
| AAATTCCAAAAAACAGCGTT+AGG | - | chr8_2:10201856-10201875 | Msa1233430:three_prime_UTR | 30.0% | |
| GAAAAAGGAAAGGACAAAAT+AGG | + | chr8_2:10201972-10201991 | None:intergenic | 30.0% | |
| ! | AAGAAGAAAAGGGTATATCT+GGG | + | chr8_2:10202002-10202021 | None:intergenic | 30.0% |
| !! | TCTTTTGGAGAGATCTATTT+AGG | - | chr8_2:10202139-10202158 | Msa1233430:three_prime_UTR | 30.0% |
| GTTATTGAAGTTTGATGAGA+AGG | - | chr8_2:10202383-10202402 | Msa1233430:three_prime_UTR | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | - | chr8_2:10202385-10202404 | Msa1233430:three_prime_UTR | 30.0% | |
| TAATCGATACTTCGATTACA+AGG | + | chr8_2:10202550-10202569 | None:intergenic | 30.0% | |
| AGGTAATTAGATGATTGATC+AGG | - | chr8_2:10202577-10202596 | Msa1233430:CDS | 30.0% | |
| TGATTAACCAAGTCTGATTA+TGG | + | chr8_2:10202618-10202637 | None:intergenic | 30.0% | |
| TTGCTTCATACAACAATTGA+GGG | + | chr8_2:10202971-10202990 | None:intergenic | 30.0% | |
| TTTGCTTCATACAACAATTG+AGG | + | chr8_2:10202972-10202991 | None:intergenic | 30.0% | |
| AAGCTGTATAAAATACTGCA+AGG | - | chr8_2:10202990-10203009 | Msa1233430:intron | 30.0% | |
| TAGACTTCATATTACTCACT+TGG | - | chr8_2:10203069-10203088 | Msa1233430:CDS | 30.0% | |
| ! | TTTGTTGGGTTTCTTTTCTT+TGG | - | chr8_2:10203103-10203122 | Msa1233430:CDS | 30.0% |
| TGAATAAATCCTCAAGACTA+GGG | + | chr8_2:10203202-10203221 | None:intergenic | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | + | chr8_2:10203203-10203222 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | + | chr8_2:10203289-10203308 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | + | chr8_2:10203290-10203309 | None:intergenic | 30.0% | |
| !!! | TACCAAGTCATTTTTACATC+GGG | - | chr8_2:10203382-10203401 | Msa1233430:intron | 30.0% |
| TTCATATTTGCCTCTTATGT+AGG | - | chr8_2:10203531-10203550 | Msa1233430:CDS | 30.0% | |
| ! | ATTCCCTATAGGTACTTTTA+TGG | - | chr8_2:10203610-10203629 | Msa1233430:intron | 30.0% |
| !! | ATGCCATAAAAGTACCTATA+GGG | + | chr8_2:10203616-10203635 | None:intergenic | 30.0% |
| ATGATAGGGAATATATCGAT+GGG | + | chr8_2:10203694-10203713 | None:intergenic | 30.0% | |
| ATCATGGAAAATCCTATATC+TGG | - | chr8_2:10203739-10203758 | Msa1233430:intron | 30.0% | |
| ! | AAAATCCTATATCTGGAATC+TGG | - | chr8_2:10203746-10203765 | Msa1233430:intron | 30.0% |
| GCTGATTACTACTATTTAGT+AGG | - | chr8_2:10203802-10203821 | Msa1233430:CDS | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | - | chr8_2:10203805-10203824 | Msa1233430:CDS | 30.0% | |
| AAGAAAATAGAATCAATGCC+AGG | + | chr8_2:10203930-10203949 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | + | chr8_2:10204040-10204059 | None:intergenic | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | - | chr8_2:10204466-10204485 | Msa1233430:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | - | chr8_2:10204589-10204608 | Msa1233430:intron | 30.0% | |
| ! | AGCAAAAAACTCACATTTTC+AGG | + | chr8_2:10204671-10204690 | None:intergenic | 30.0% |
| GAAAGTTTCTACATCTATTG+AGG | - | chr8_2:10204906-10204925 | Msa1233430:intron | 30.0% | |
| TACATCTATTGAGGTATGAT+TGG | - | chr8_2:10204915-10204934 | Msa1233430:intron | 30.0% | |
| AAGTATGAAGCAAATTCTGA+GGG | + | chr8_2:10205046-10205065 | None:intergenic | 30.0% | |
| CTTCATACTTCCATTATTGT+CGG | - | chr8_2:10205056-10205075 | Msa1233430:intron | 30.0% | |
| ! | CTTTTCAGATAAGCATAATC+TGG | + | chr8_2:10205103-10205122 | None:intergenic | 30.0% |
| ! | AACCTAAACTATGGTTTTCA+AGG | + | chr8_2:10205209-10205228 | None:intergenic | 30.0% |
| !! | TCATAGTTTAGGTTCTAGAT+GGG | - | chr8_2:10205265-10205284 | Msa1233430:intron | 30.0% |
| AATCGAAGACATAATCAAAC+TGG | + | chr8_2:10205342-10205361 | None:intergenic | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | - | chr8_2:10205341-10205360 | Msa1233430:intron | 30.0% | |
| !!! | TACCAGTGCATTTTTTAATG+TGG | - | chr8_2:10205722-10205741 | Msa1233430:CDS | 30.0% |
| GAAAAGATGGTAGGAATATT+GGG | - | chr8_2:10205764-10205783 | Msa1233430:intron | 30.0% | |
| AAGATTCCATCATTAGCAAT+AGG | + | chr8_2:10205829-10205848 | None:intergenic | 30.0% | |
| ! | TATGGTGCGTGTTTTATATA+TGG | - | chr8_2:10205900-10205919 | Msa1233430:CDS | 30.0% |
| ! | ATGGTGCGTGTTTTATATAT+GGG | - | chr8_2:10205901-10205920 | Msa1233430:CDS | 30.0% |
| TATCGAGTTCGAATTTCTTT+CGG | - | chr8_2:10206080-10206099 | Msa1233430:intron | 30.0% | |
| AAGTTCACATATCATGTCAT+CGG | - | chr8_2:10206240-10206259 | Msa1233430:intron | 30.0% | |
| TCAGAATTTACAAGGAAGAA+AGG | + | chr8_2:10206396-10206415 | None:intergenic | 30.0% | |
| TCTTCCTTGTAAATTCTGAA+AGG | - | chr8_2:10206397-10206416 | Msa1233430:intron | 30.0% | |
| ! | ATACTCATTTTCACAAAGTG+CGG | - | chr8_2:10206423-10206442 | Msa1233430:intron | 30.0% |
| !!! | TCTTTGATATTTTTAGCCTC+AGG | - | chr8_2:10206639-10206658 | Msa1233430:CDS | 30.0% |
| !!! | CTTTGATATTTTTAGCCTCA+GGG | - | chr8_2:10206640-10206659 | Msa1233430:CDS | 30.0% |
| TATCATTGTGAACTATATCG+GGG | - | chr8_2:10206676-10206695 | Msa1233430:intron | 30.0% | |
| ! | TTTTTGACAGAAGCTATTTG+TGG | + | chr8_2:10206901-10206920 | None:intergenic | 30.0% |
| GACAAAATATCTTGTGTAAG+TGG | - | chr8_2:10206995-10207014 | Msa1233430:five_prime_UTR | 30.0% | |
| TATCTGGGAAATGCTGAAAA+AGG | + | chr8_2:10201987-10202006 | None:intergenic | 35.0% | |
| ! | GAAGAAGAAAAGGGTATATC+TGG | + | chr8_2:10202003-10202022 | None:intergenic | 35.0% |
| GTCATCGTAGAAGAAGAAAA+GGG | + | chr8_2:10202012-10202031 | None:intergenic | 35.0% | |
| ATTGGAAATAAGTTCCGTCT+TGG | - | chr8_2:10202097-10202116 | Msa1233430:three_prime_UTR | 35.0% | |
| TTGGAAATAAGTTCCGTCTT+GGG | - | chr8_2:10202098-10202117 | Msa1233430:three_prime_UTR | 35.0% | |
| ! | TACCAATTTTTCTCCCAAGA+CGG | + | chr8_2:10202114-10202133 | None:intergenic | 35.0% |
| !!! | AAAATTGGTAGCGGATCTTT+TGG | - | chr8_2:10202124-10202143 | Msa1233430:three_prime_UTR | 35.0% |
| GTAATCACCATAATCAGACT+TGG | - | chr8_2:10202608-10202627 | Msa1233430:CDS | 35.0% | |
| ! | GATTAGGTGATGTTGATTAC+CGG | - | chr8_2:10202678-10202697 | Msa1233430:CDS | 35.0% |
| CTGTATAAAATACTGCAAGG+AGG | - | chr8_2:10202993-10203012 | Msa1233430:intron | 35.0% | |
| !! | ATCCTTGTGATGGATTTACT+TGG | - | chr8_2:10203176-10203195 | Msa1233430:intron | 35.0% |
| ACAATTTCCTCATGGGTTTA+GGG | - | chr8_2:10203417-10203436 | Msa1233430:intron | 35.0% | |
| AACTGATACATAACAAGCGT+TGG | + | chr8_2:10203512-10203531 | None:intergenic | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | + | chr8_2:10203544-10203563 | None:intergenic | 35.0% | |
| !! | TAGGTGTACATCATTGACTT+TGG | - | chr8_2:10203550-10203569 | Msa1233430:CDS | 35.0% |
| !! | GATGCCATAAAAGTACCTAT+AGG | + | chr8_2:10203617-10203636 | None:intergenic | 35.0% |
| TGATAGGGAATATATCGATG+GGG | + | chr8_2:10203693-10203712 | None:intergenic | 35.0% | |
| CATGATAGGGAATATATCGA+TGG | + | chr8_2:10203695-10203714 | None:intergenic | 35.0% | |
| AACATCCAGATTCCAGATAT+AGG | + | chr8_2:10203754-10203773 | None:intergenic | 35.0% | |
| ! | AACTAATTTTGAGCTTTGCG+CGG | - | chr8_2:10203882-10203901 | Msa1233430:intron | 35.0% |
| GGCTAACAAAACTATCATCA+AGG | + | chr8_2:10204019-10204038 | None:intergenic | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | + | chr8_2:10204058-10204077 | None:intergenic | 35.0% | |
| GATTCTTATTCTCTCTGCAA+GGG | + | chr8_2:10204543-10204562 | None:intergenic | 35.0% | |
| AGATTCTTATTCTCTCTGCA+AGG | + | chr8_2:10204544-10204563 | None:intergenic | 35.0% | |
| CAGAGAGAATAAGAATCTGA+CGG | - | chr8_2:10204546-10204565 | Msa1233430:intron | 35.0% | |
| AGAGAGAATAAGAATCTGAC+GGG | - | chr8_2:10204547-10204566 | Msa1233430:intron | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | - | chr8_2:10204583-10204602 | Msa1233430:intron | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | - | chr8_2:10204690-10204709 | Msa1233430:intron | 35.0% | |
| GAAGTATGAAGCAAATTCTG+AGG | + | chr8_2:10205047-10205066 | None:intergenic | 35.0% | |
| GTCCTTGAAAACCATAGTTT+AGG | - | chr8_2:10205204-10205223 | Msa1233430:intron | 35.0% | |
| !! | ACCATAGTTTAGGTTCTAGA+TGG | - | chr8_2:10205214-10205233 | Msa1233430:intron | 35.0% |
| !! | CCATAGTTTAGGTTCTAGAT+GGG | - | chr8_2:10205215-10205234 | Msa1233430:intron | 35.0% |
| !! | GTCATAGTTTAGGTTCTAGA+TGG | - | chr8_2:10205264-10205283 | Msa1233430:intron | 35.0% |
| ACATAATCAAACTGGAATCC+TGG | + | chr8_2:10205334-10205353 | None:intergenic | 35.0% | |
| CACCACATTAAAAAATGCAC+TGG | + | chr8_2:10205727-10205746 | None:intergenic | 35.0% | |
| GGAAAAGATGGTAGGAATAT+TGG | - | chr8_2:10205763-10205782 | Msa1233430:CDS | 35.0% | |
| GGTTAAGTCATTTGTAAGTG+GGG | + | chr8_2:10205866-10205885 | None:intergenic | 35.0% | |
| CGGTTAAGTCATTTGTAAGT+GGG | + | chr8_2:10205867-10205886 | None:intergenic | 35.0% | |
| CCACTTACAAATGACTTAAC+CGG | - | chr8_2:10205865-10205884 | Msa1233430:intron | 35.0% | |
| TGTTTCTTCCAGATGATACT+CGG | + | chr8_2:10206273-10206292 | None:intergenic | 35.0% | |
| AATTTGGATTCAACGCTTAG+AGG | - | chr8_2:10206307-10206326 | Msa1233430:intron | 35.0% | |
| TCTGCATTTAAACGATGAGA+GGG | - | chr8_2:10206339-10206358 | Msa1233430:intron | 35.0% | |
| AGAAAAAGCTGCAAGCAAAT+TGG | - | chr8_2:10206479-10206498 | Msa1233430:intron | 35.0% | |
| GAAAAAGCTGCAAGCAAATT+GGG | - | chr8_2:10206480-10206499 | Msa1233430:intron | 35.0% | |
| !!! | TTTACGAGGCTAGTTTTGTT+AGG | + | chr8_2:10206553-10206572 | None:intergenic | 35.0% |
| ! | AACAAAACTAGCCTCGTAAA+AGG | - | chr8_2:10206553-10206572 | Msa1233430:intron | 35.0% |
| TATGCTTTATATCATCCCTG+AGG | + | chr8_2:10206658-10206677 | None:intergenic | 35.0% | |
| ATCATTGTGAACTATATCGG+GGG | - | chr8_2:10206677-10206696 | Msa1233430:intron | 35.0% | |
| AATTACAGTAGAGAGAAACG+CGG | + | chr8_2:10206795-10206814 | None:intergenic | 35.0% | |
| GTTTCTCTCTACTGTAATTG+TGG | - | chr8_2:10206796-10206815 | Msa1233430:CDS | 35.0% | |
| TCACATGTAAGCTTGATCTT+TGG | + | chr8_2:10206839-10206858 | None:intergenic | 35.0% | |
| TTCCAAAAAACAGCGTTAGG+TGG | - | chr8_2:10201859-10201878 | Msa1233430:three_prime_UTR | 40.0% | |
| !!! | TACCACCTAACGCTGTTTTT+TGG | + | chr8_2:10201864-10201883 | None:intergenic | 40.0% |
| GGGAAATGCTGAAAAAGGAA+AGG | + | chr8_2:10201982-10202001 | None:intergenic | 40.0% | |
| CGTCATCGTAGAAGAAGAAA+AGG | + | chr8_2:10202013-10202032 | None:intergenic | 40.0% | |
| GGTTTAATGGAACCTCGAAT+TGG | - | chr8_2:10202079-10202098 | Msa1233430:three_prime_UTR | 40.0% | |
| CGGAACTTATTTCCAATTCG+AGG | + | chr8_2:10202094-10202113 | None:intergenic | 40.0% | |
| TTCCGTCTTGGGAGAAAAAT+TGG | - | chr8_2:10202109-10202128 | Msa1233430:three_prime_UTR | 40.0% | |
| CTTGGGAGAAAAATTGGTAG+CGG | - | chr8_2:10202115-10202134 | Msa1233430:three_prime_UTR | 40.0% | |
| !! | GAAGTATCGATTACAGACGT+AGG | - | chr8_2:10202557-10202576 | Msa1233430:CDS | 40.0% |
| ! | GATGATTGATCAGGTTAGTC+AGG | - | chr8_2:10202586-10202605 | Msa1233430:CDS | 40.0% |
| !! | ATACAACAATTGAGGGTGCT+TGG | + | chr8_2:10202964-10202983 | None:intergenic | 40.0% |
| !! | GGTTTCTTTTCTTTGGAAGC+TGG | - | chr8_2:10203110-10203129 | Msa1233430:CDS | 40.0% |
| CTGGAATACCGAATGTGAAA+TGG | - | chr8_2:10203129-10203148 | Msa1233430:CDS | 40.0% | |
| ATACCGAATGTGAAATGGTC+CGG | - | chr8_2:10203134-10203153 | Msa1233430:CDS | 40.0% | |
| AGAGTACAACATCCTTGTGA+TGG | - | chr8_2:10203166-10203185 | Msa1233430:intron | 40.0% | |
| TTGATCGGCAAGCATAAGAA+CGG | + | chr8_2:10203255-10203274 | None:intergenic | 40.0% | |
| TCTTATGCTTGCCGATCAAA+TGG | - | chr8_2:10203256-10203275 | Msa1233430:intron | 40.0% | |
| GTCCCGATGTAAAAATGACT+TGG | + | chr8_2:10203387-10203406 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | - | chr8_2:10203409-10203428 | Msa1233430:intron | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | - | chr8_2:10203410-10203429 | Msa1233430:intron | 40.0% | |
| AAACCCATGAGGAAATTGTC+TGG | + | chr8_2:10203416-10203435 | None:intergenic | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | - | chr8_2:10203416-10203435 | Msa1233430:intron | 40.0% | |
| CACATCAGCATATTCCCTAT+AGG | - | chr8_2:10203599-10203618 | Msa1233430:intron | 40.0% | |
| ! | ACTAATTTTGAGCTTTGCGC+GGG | - | chr8_2:10203883-10203902 | Msa1233430:intron | 40.0% |
| ACTGGTGTAACAATCATGCA+AGG | + | chr8_2:10203981-10204000 | None:intergenic | 40.0% | |
| AGGCAAATAGCTTAACGAAC+TGG | + | chr8_2:10203999-10204018 | None:intergenic | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | - | chr8_2:10204472-10204491 | Msa1233430:intron | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | - | chr8_2:10204689-10204708 | Msa1233430:intron | 40.0% | |
| CTATTCATCCGTGAAGGTTT+GGG | - | chr8_2:10205136-10205155 | Msa1233430:intron | 40.0% | |
| ! | CCCATCTAGAACCTAAACTA+TGG | + | chr8_2:10205218-10205237 | None:intergenic | 40.0% |
| ACCATCACTTACAATACCAC+GGG | + | chr8_2:10205410-10205429 | None:intergenic | 40.0% | |
| CACCATCACTTACAATACCA+CGG | + | chr8_2:10205411-10205430 | None:intergenic | 40.0% | |
| AGTGACAATGTGACACTTAC+AGG | - | chr8_2:10205491-10205510 | Msa1233430:CDS | 40.0% | |
| GTGACAATGTGACACTTACA+GGG | - | chr8_2:10205492-10205511 | Msa1233430:CDS | 40.0% | |
| GGATGAGTCAGATGACAAAA+AGG | + | chr8_2:10205683-10205702 | None:intergenic | 40.0% | |
| AAGATGGTAGGAATATTGGG+TGG | - | chr8_2:10205767-10205786 | Msa1233430:intron | 40.0% | |
| ATCATTAGCAATAGGTCCAG+AGG | + | chr8_2:10205821-10205840 | None:intergenic | 40.0% | |
| TCTGGACCTATTGCTAATGA+TGG | - | chr8_2:10205820-10205839 | Msa1233430:intron | 40.0% | |
| CCGGTTAAGTCATTTGTAAG+TGG | + | chr8_2:10205868-10205887 | None:intergenic | 40.0% | |
| AACCGGATCTAAAGATGCTA+TGG | - | chr8_2:10205882-10205901 | Msa1233430:intron | 40.0% | |
| CACCATAGCATCTTTAGATC+CGG | + | chr8_2:10205887-10205906 | None:intergenic | 40.0% | |
| CTTGCAGAAGTCAAAGATGA+TGG | - | chr8_2:10205954-10205973 | Msa1233430:intron | 40.0% | |
| TCGAATTTCTTTCGGTCAAG+TGG | - | chr8_2:10206088-10206107 | Msa1233430:intron | 40.0% | |
| ! | TATGAGCACCAGAGCTTTTA+CGG | + | chr8_2:10206219-10206238 | None:intergenic | 40.0% |
| GTCTGCATTTAAACGATGAG+AGG | - | chr8_2:10206338-10206357 | Msa1233430:intron | 40.0% | |
| ! | ATGAACAGAAGCCTTTTACG+AGG | + | chr8_2:10206567-10206586 | None:intergenic | 40.0% |
| ATCAAGCTTACATGTGAGAC+TGG | - | chr8_2:10206842-10206861 | Msa1233430:five_prime_UTR | 40.0% | |
| ! | GGTGATGTTGATTACCGGTT+TGG | - | chr8_2:10202683-10202702 | Msa1233430:CDS | 45.0% |
| ACACCGGACCATTTCACATT+CGG | + | chr8_2:10203140-10203159 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACA+AGG | + | chr8_2:10203181-10203200 | None:intergenic | 45.0% | |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | - | chr8_2:10203190-10203209 | Msa1233430:intron | 45.0% |
| TATGCTTGCCGATCAAATGG+TGG | - | chr8_2:10203259-10203278 | Msa1233430:intron | 45.0% | |
| ATGCTTGCCGATCAAATGGT+GGG | - | chr8_2:10203260-10203279 | Msa1233430:intron | 45.0% | |
| AGGGAAACCCACCATTTGAT+CGG | + | chr8_2:10203270-10203289 | None:intergenic | 45.0% | |
| ATTTCCTCATGGGTTTAGGG+AGG | - | chr8_2:10203420-10203439 | Msa1233430:intron | 45.0% | |
| ! | CTAATTTTGAGCTTTGCGCG+GGG | - | chr8_2:10203884-10203903 | Msa1233430:intron | 45.0% |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | - | chr8_2:10203909-10203928 | Msa1233430:intron | 45.0% |
| AATGCCAGGAATGCAAAACC+AGG | + | chr8_2:10203916-10203935 | None:intergenic | 45.0% | |
| TATTACACACCCCAGAGAGA+GGG | + | chr8_2:10204397-10204416 | None:intergenic | 45.0% | |
| ATATTACACACCCCAGAGAG+AGG | + | chr8_2:10204398-10204417 | None:intergenic | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | + | chr8_2:10204708-10204727 | None:intergenic | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+TGG | - | chr8_2:10204709-10204728 | Msa1233430:intron | 45.0% |
| ! | GGTATTTCTGCAGTCTACCT+TGG | - | chr8_2:10204830-10204849 | Msa1233430:intron | 45.0% |
| ! | CAAATTCTGAGGGATAGCCA+CGG | + | chr8_2:10205036-10205055 | None:intergenic | 45.0% |
| TCCATTATTGTCGGTCACTG+AGG | - | chr8_2:10205065-10205084 | Msa1233430:intron | 45.0% | |
| ACCTCAGTGACCGACAATAA+TGG | + | chr8_2:10205069-10205088 | None:intergenic | 45.0% | |
| CCAAACCTTCACGGATGAAT+AGG | + | chr8_2:10205138-10205157 | None:intergenic | 45.0% | |
| CCTATTCATCCGTGAAGGTT+TGG | - | chr8_2:10205135-10205154 | Msa1233430:intron | 45.0% | |
| AAACAAGGCCCAAACCTTCA+CGG | + | chr8_2:10205147-10205166 | None:intergenic | 45.0% | |
| TCACTTACAATACCACGGGA+AGG | + | chr8_2:10205406-10205425 | None:intergenic | 45.0% | |
| TCCCGTGGTATTGTAAGTGA+TGG | - | chr8_2:10205406-10205425 | Msa1233430:intron | 45.0% | |
| TGCTGTCTCATTACGTTAGC+TGG | - | chr8_2:10205431-10205450 | Msa1233430:intron | 45.0% | |
| TCAGCATTTGCAGAAGCTAG+CGG | + | chr8_2:10205546-10205565 | None:intergenic | 45.0% | |
| CTAGCTTCTGCAAATGCTGA+TGG | - | chr8_2:10205546-10205565 | Msa1233430:intron | 45.0% | |
| TTAATGTGGTGCCTCTGTGT+AGG | - | chr8_2:10205736-10205755 | Msa1233430:CDS | 45.0% | |
| !! | TGTGTAGGTGGTGGAAAAGA+TGG | - | chr8_2:10205751-10205770 | Msa1233430:CDS | 45.0% |
| !! | TAGGTGGTGGAAAAGATGGT+AGG | - | chr8_2:10205755-10205774 | Msa1233430:CDS | 45.0% |
| AAACTTGAATCCAGCGTGAG+AGG | + | chr8_2:10206187-10206206 | None:intergenic | 45.0% | |
| ! | CTCACGCTGGATTCAAGTTT+AGG | - | chr8_2:10206187-10206206 | Msa1233430:intron | 45.0% |
| ! | CATTTTCACAAAGTGCGGAG+TGG | - | chr8_2:10206428-10206447 | Msa1233430:intron | 45.0% |
| GCTTACATGTGAGACTGGAA+TGG | - | chr8_2:10206847-10206866 | Msa1233430:five_prime_UTR | 45.0% | |
| !! | ATTTGATTATTAATTAATTA+AGG | + | chr8_2:10201840-10201859 | None:intergenic | 5.0% |
| !!! | TATAATTTTTTTAGATAATT+TGG | - | chr8_2:10204133-10204152 | Msa1233430:intron | 5.0% |
| GAATGTGAAATGGTCCGGTG+TGG | - | chr8_2:10203139-10203158 | Msa1233430:intron | 50.0% | |
| GTTGTACTCTCCTTCCACAC+CGG | + | chr8_2:10203156-10203175 | None:intergenic | 50.0% | |
| TTTCTGCAGTCTACCTTGGC+AGG | - | chr8_2:10204834-10204853 | Msa1233430:intron | 50.0% | |
| TTCTGCAGTCTACCTTGGCA+GGG | - | chr8_2:10204835-10204854 | Msa1233430:intron | 50.0% | |
| CGTGACCTATTCATCCGTGA+AGG | - | chr8_2:10205130-10205149 | Msa1233430:intron | 50.0% | |
| ! | TGTTCTTGCCTTGTTGCTCC+AGG | - | chr8_2:10205313-10205332 | Msa1233430:CDS | 50.0% |
| ACTGGAATCCTGGAGCAACA+AGG | + | chr8_2:10205324-10205343 | None:intergenic | 50.0% | |
| CTTACAATACCACGGGAAGG+AGG | + | chr8_2:10205403-10205422 | None:intergenic | 50.0% | |
| ! | GCAAATGCTGATGGACAGTC+AGG | - | chr8_2:10205555-10205574 | Msa1233430:intron | 50.0% |
| ! | CTTTTCCACCACCTACACAG+AGG | + | chr8_2:10205750-10205769 | None:intergenic | 50.0% |
| TTCGGTCAAGTGGATCTGCA+AGG | - | chr8_2:10206098-10206117 | Msa1233430:intron | 50.0% | |
| GAGCACAACCGAGTATCATC+TGG | - | chr8_2:10206262-10206281 | Msa1233430:intron | 50.0% | |
| ACAGTAGAGAGAAACGCGGT+GGG | + | chr8_2:10206791-10206810 | None:intergenic | 50.0% | |
| TACAGTAGAGAGAAACGCGG+TGG | + | chr8_2:10206792-10206811 | None:intergenic | 50.0% | |
| GACTGGAATGGAGCGAGTAA+CGG | - | chr8_2:10206859-10206878 | Msa1233430:five_prime_UTR | 50.0% | |
| ACTGGAATGGAGCGAGTAAC+GGG | - | chr8_2:10206860-10206879 | Msa1233430:five_prime_UTR | 50.0% | |
| GTGAAATGGTCCGGTGTGGA+AGG | - | chr8_2:10203143-10203162 | Msa1233430:intron | 55.0% | |
| CCTGCTTTCAATCCCTGCCA+AGG | + | chr8_2:10204850-10204869 | None:intergenic | 55.0% | |
| CCTTGGCAGGGATTGAAAGC+AGG | - | chr8_2:10204847-10204866 | Msa1233430:intron | 55.0% | |
| ! | CTTTGCTAGTCTCTCTGCCG+TGG | - | chr8_2:10205016-10205035 | Msa1233430:intron | 55.0% |
| AATACCACGGGAAGGAGGAG+TGG | + | chr8_2:10205398-10205417 | None:intergenic | 55.0% | |
| CACTTACAGGGTCTTGCTGC+TGG | - | chr8_2:10205504-10205523 | Msa1233430:CDS | 55.0% | |
| ATGTGGTGCCTCTGTGTAGG+TGG | - | chr8_2:10205739-10205758 | Msa1233430:CDS | 55.0% | |
| CTTCGTCTGATCCCACTCGA+AGG | - | chr8_2:10205791-10205810 | Msa1233430:intron | 55.0% | |
| CCAGAGGTTCTCCTTCGAGT+GGG | + | chr8_2:10205805-10205824 | None:intergenic | 55.0% | |
| TCCAGAGGTTCTCCTTCGAG+TGG | + | chr8_2:10205806-10205825 | None:intergenic | 55.0% | |
| TCAAGTGGATCTGCAAGGCG+AGG | - | chr8_2:10206103-10206122 | Msa1233430:intron | 55.0% | |
| CACTGCCAACAGCTGCATCA+CGG | + | chr8_2:10206144-10206163 | None:intergenic | 55.0% | |
| TGCAGCTGTTGGCAGTGAGA+CGG | - | chr8_2:10206147-10206166 | Msa1233430:intron | 55.0% | |
| GGAGCAGTCCGTAAAAGCTC+TGG | - | chr8_2:10206208-10206227 | Msa1233430:intron | 55.0% | |
| TCACAAAGTGCGGAGTGGAG+TGG | - | chr8_2:10206433-10206452 | Msa1233430:intron | 55.0% | |
| CTGGAATGGAGCGAGTAACG+GGG | - | chr8_2:10206861-10206880 | Msa1233430:five_prime_UTR | 55.0% | |
| CACGCCTCCCTAAACCCATG+AGG | + | chr8_2:10203427-10203446 | None:intergenic | 60.0% | |
| CTTTGCGCGGGGAACTTTCC+TGG | - | chr8_2:10203895-10203914 | Msa1233430:intron | 60.0% | |
| CCAGAGAGAGGGAGAGAGTC+GGG | + | chr8_2:10204386-10204405 | None:intergenic | 60.0% | |
| CCCAGAGAGAGGGAGAGAGT+CGG | + | chr8_2:10204387-10204406 | None:intergenic | 60.0% | |
| CCGACTCTCTCCCTCTCTCT+GGG | - | chr8_2:10204384-10204403 | Msa1233430:intron | 60.0% | |
| CGACTCTCTCCCTCTCTCTG+GGG | - | chr8_2:10204385-10204404 | Msa1233430:intron | 60.0% | |
| CTTGCTGCTGGACCGAGTTC+TGG | - | chr8_2:10205516-10205535 | Msa1233430:CDS | 60.0% | |
| GCTAGCGGCAGACCAGAACT+CGG | + | chr8_2:10205531-10205550 | None:intergenic | 60.0% | |
| TGGTGCCTCTGTGTAGGTGG+TGG | - | chr8_2:10205742-10205761 | Msa1233430:CDS | 60.0% | |
| CCCACTCGAAGGAGAACCTC+TGG | - | chr8_2:10205802-10205821 | Msa1233430:intron | 60.0% | |
| AGCAGCCGTGATGCAGCTGT+TGG | - | chr8_2:10206136-10206155 | Msa1233430:intron | 60.0% | |
| AGCGTGAGAGGACGAGAGGA+GGG | + | chr8_2:10206175-10206194 | None:intergenic | 60.0% | |
| ATCCAGCGTGAGAGGACGAG+AGG | + | chr8_2:10206179-10206198 | None:intergenic | 60.0% | |
| CCCGACTCTCTCCCTCTCTC+TGG | - | chr8_2:10204383-10204402 | Msa1233430:intron | 65.0% | |
| ATCGCCACTCCTCCTTCCCG+TGG | - | chr8_2:10205391-10205410 | Msa1233430:intron | 65.0% | |
| CAGCGTGAGAGGACGAGAGG+AGG | + | chr8_2:10206176-10206195 | None:intergenic | 65.0% | |
| CTCCTCTCGTCCTCTCACGC+TGG | - | chr8_2:10206174-10206193 | Msa1233430:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 10201799 | 10207112 | 10201799 | ID=Msa1233430;Name=Msa1233430 |
| chr8_2 | mRNA | 10201799 | 10207112 | 10201799 | ID=Msa1233430-mRNA-1;Parent=Msa1233430;Name=Msa1233430-mRNA-1;_AED=0.18;_eAED=0.18;_QI=286|1|1|1|1|1|14|740|474 |
| chr8_2 | exon | 10201799 | 10202832 | 10201799 | ID=Msa1233430-mRNA-1:exon:4032;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10203008 | 10203153 | 10203008 | ID=Msa1233430-mRNA-1:exon:4031;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10203335 | 10203398 | 10203335 | ID=Msa1233430-mRNA-1:exon:4030;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10203494 | 10203576 | 10203494 | ID=Msa1233430-mRNA-1:exon:4029;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10203760 | 10203886 | 10203760 | ID=Msa1233430-mRNA-1:exon:4028;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10203984 | 10204068 | 10203984 | ID=Msa1233430-mRNA-1:exon:4027;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10204150 | 10204213 | 10204150 | ID=Msa1233430-mRNA-1:exon:4026;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10204301 | 10204362 | 10204301 | ID=Msa1233430-mRNA-1:exon:4025;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10205291 | 10205358 | 10205291 | ID=Msa1233430-mRNA-1:exon:4024;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10205457 | 10205552 | 10205457 | ID=Msa1233430-mRNA-1:exon:4023;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10205634 | 10205782 | 10205634 | ID=Msa1233430-mRNA-1:exon:4022;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10205894 | 10205963 | 10205894 | ID=Msa1233430-mRNA-1:exon:4021;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10206624 | 10206664 | 10206624 | ID=Msa1233430-mRNA-1:exon:4020;Parent=Msa1233430-mRNA-1 |
| chr8_2 | exon | 10206751 | 10207112 | 10206751 | ID=Msa1233430-mRNA-1:exon:4019;Parent=Msa1233430-mRNA-1 |
| chr8_2 | five_prime_UTR | 10206827 | 10207112 | 10206827 | ID=Msa1233430-mRNA-1:five_prime_utr;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10206751 | 10206826 | 10206751 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10206624 | 10206664 | 10206624 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10205894 | 10205963 | 10205894 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10205634 | 10205782 | 10205634 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10205457 | 10205552 | 10205457 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10205291 | 10205358 | 10205291 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10204301 | 10204362 | 10204301 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10204150 | 10204213 | 10204150 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10203984 | 10204068 | 10203984 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10203760 | 10203886 | 10203760 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10203494 | 10203576 | 10203494 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10203335 | 10203398 | 10203335 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10203008 | 10203153 | 10203008 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | CDS | 10202539 | 10202832 | 10202539 | ID=Msa1233430-mRNA-1:cds;Parent=Msa1233430-mRNA-1 |
| chr8_2 | three_prime_UTR | 10201799 | 10202538 | 10201799 | ID=Msa1233430-mRNA-1:three_prime_utr;Parent=Msa1233430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
