Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197490 | XP_003628728.3 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197490 | sp|Q9ZPQ3|GEK1_ARATH | 74.051 | 316 | 78 | 1 | 48 | 359 | 1 | 316 | 1.90e-173 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197490 | A0A396GML3 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1197490 | Msa1250990 | 0.953098 | 5.784343e-111 | -8.615850e-47 |
| Msa1197490 | Msa1291580 | 0.843274 | 1.549349e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197490 | MtrunA17_Chr8g0366111 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1197490 | AT2G03800.2 | 68.678 | 348 | 101 | 2 | 20 | 359 | 13 | 360 | 1.37e-174 | 489 |
| Msa1197490 | AT2G03800.1 | 74.051 | 316 | 78 | 1 | 48 | 359 | 1 | 316 | 1.93e-174 | 488 |
Find 115 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATTTGTTTCTCCTTT+TGG | 0.133900 | 8_1:+47774337 | None:intergenic |
| TATAGTGGTGGAAGATTATT+TGG | 0.167588 | 8_1:-47778126 | Msa1197490:CDS |
| GACACTCAAAAGAAGTTATT+TGG | 0.171593 | 8_1:+47773914 | None:intergenic |
| TGGGTTGGTCACCTACTTTC+TGG | 0.174476 | 8_1:-47774382 | Msa1197490:CDS |
| CATACATTTATTATCAATCT+AGG | 0.231253 | 8_1:+47773613 | None:intergenic |
| TATGTTCCTATGTATTTATT+TGG | 0.233322 | 8_1:-47773646 | Msa1197490:three_prime_UTR |
| GCGGAGCAGAATATTAAAAT+TGG | 0.268594 | 8_1:-47773941 | Msa1197490:CDS |
| TTGGATTCGTTCAGTTAGTC+TGG | 0.301378 | 8_1:-47775525 | Msa1197490:intron |
| CAGTCTGATCCCTGAGTTTG+AGG | 0.317256 | 8_1:-47777248 | Msa1197490:intron |
| TCACCTACTTTCTGGATATT+CGG | 0.318220 | 8_1:-47774374 | Msa1197490:CDS |
| AAATAAGCCAACTATGTTTC+TGG | 0.319387 | 8_1:-47776767 | Msa1197490:CDS |
| ATCTAAGGCTGCTGCGGTTT+AGG | 0.321809 | 8_1:+47778464 | None:intergenic |
| AATATAGGAAAGATGGTGTT+TGG | 0.321846 | 8_1:-47774402 | Msa1197490:intron |
| GCAACCCGGACCCCATTTCC+AGG | 0.353692 | 8_1:-47778308 | Msa1197490:intron |
| CCCTCTTAGCCATGCCTGGC+TGG | 0.355358 | 8_1:-47778330 | Msa1197490:CDS |
| GATAAGAAGAAAGTCCTTCT+TGG | 0.358937 | 8_1:-47774818 | Msa1197490:CDS |
| CCAACTATGTTTCTGGAGAT+TGG | 0.370534 | 8_1:-47776760 | Msa1197490:intron |
| GAGGGACTGATGTCGGAAAC+TGG | 0.381603 | 8_1:-47775483 | Msa1197490:CDS |
| CAGTTAGTCTGGGAAGGACT+TGG | 0.381874 | 8_1:-47775514 | Msa1197490:CDS |
| GAGTAAGGCACCTCAAACTC+AGG | 0.385327 | 8_1:+47777238 | None:intergenic |
| ACATTATGTGCCTCGGCATA+TGG | 0.385428 | 8_1:-47774783 | Msa1197490:CDS |
| GCTCTCACTGTTCACCCTAT+TGG | 0.390767 | 8_1:-47778020 | Msa1197490:intron |
| TAATATGAATTTATTTGCCT+TGG | 0.392261 | 8_1:-47773584 | Msa1197490:three_prime_UTR |
| TTGAACCTGGAAATGGGGTC+CGG | 0.403605 | 8_1:+47778303 | None:intergenic |
| ACAAGGTGGGAAGAGGTTAC+TGG | 0.414639 | 8_1:-47778101 | Msa1197490:CDS |
| GGGTTGAGAGTGTTACTTCA+TGG | 0.417052 | 8_1:-47778155 | Msa1197490:CDS |
| AATTTACTGCAGGAGTTTCA+AGG | 0.417491 | 8_1:-47773996 | Msa1197490:intron |
| GTCTGGGAAGGACTTGGACT+TGG | 0.418424 | 8_1:-47775508 | Msa1197490:CDS |
| AATGCCCTCTTAGCCATGCC+TGG | 0.423510 | 8_1:-47778334 | Msa1197490:CDS |
| ATAGTTGGCTTATTTGTCAA+TGG | 0.432303 | 8_1:+47776775 | None:intergenic |
| GTCTATAAAAGCTGCATATG+AGG | 0.434564 | 8_1:-47774293 | Msa1197490:CDS |
| CCACCTCAAGGTGGGAAACC+TGG | 0.443476 | 8_1:-47777340 | Msa1197490:CDS |
| GGAGAAACAAATGTGGAGAT+TGG | 0.443599 | 8_1:-47774331 | Msa1197490:CDS |
| AGAAGATGAAATTACCAATA+GGG | 0.451407 | 8_1:+47778006 | None:intergenic |
| ATAAGAAGAAAGTCCTTCTT+GGG | 0.451631 | 8_1:-47774817 | Msa1197490:CDS |
| TGGGAAGGACTTGGACTTGG+AGG | 0.457377 | 8_1:-47775505 | Msa1197490:CDS |
| TTCCTCAATTTAGATTACTC+TGG | 0.461039 | 8_1:-47776815 | Msa1197490:intron |
| GTTGTACATGACATGTTACT+TGG | 0.462919 | 8_1:-47778541 | Msa1197490:exon |
| ACAAGATGCTGCTCAAGTTA+TGG | 0.465443 | 8_1:-47775698 | Msa1197490:CDS |
| CGTATCCAAGGTCCAATCCT+AGG | 0.470362 | 8_1:+47777298 | None:intergenic |
| ATGGCTAAGAGGGCATTGGC+AGG | 0.471091 | 8_1:+47778340 | None:intergenic |
| CAAGGTCCAATCCTAGGATT+CGG | 0.473623 | 8_1:+47777304 | None:intergenic |
| GAAGGACTTGGACTTGGAGG+AGG | 0.478522 | 8_1:-47775502 | Msa1197490:CDS |
| GGGCAGCATTGCCGAATCCT+AGG | 0.481352 | 8_1:-47777315 | Msa1197490:CDS |
| TGGAAGATTATTTGGATACA+AGG | 0.483917 | 8_1:-47778118 | Msa1197490:CDS |
| CCAGCCAGGCATGGCTAAGA+GGG | 0.491015 | 8_1:+47778330 | None:intergenic |
| AGGAAAGATGGTGTTTGGGT+TGG | 0.495625 | 8_1:-47774397 | Msa1197490:CDS |
| TTCTGGATATTCGGTGCCAA+TGG | 0.497093 | 8_1:-47774365 | Msa1197490:CDS |
| TTCGGCAATGCTGCCCATCC+AGG | 0.498257 | 8_1:+47777322 | None:intergenic |
| TGAACCTGGAAATGGGGTCC+GGG | 0.500138 | 8_1:+47778304 | None:intergenic |
| ATATAGGAAAGATGGTGTTT+GGG | 0.501627 | 8_1:-47774401 | Msa1197490:intron |
| TTGGCAGGGTTGATTGAAGC+AGG | 0.506215 | 8_1:+47778355 | None:intergenic |
| GTCCTTCTTGGGATAGGTGG+TGG | 0.506343 | 8_1:-47774806 | Msa1197490:CDS |
| TGCTGCTCAAGTTATGGCTC+AGG | 0.509122 | 8_1:-47775692 | Msa1197490:intron |
| ATTTACTGCAGGAGTTTCAA+GGG | 0.511764 | 8_1:-47773995 | Msa1197490:intron |
| TTTGGATACAAGGTGGGAAG+AGG | 0.512434 | 8_1:-47778108 | Msa1197490:CDS |
| TAGGTAGTACTGAAGACTAC+TGG | 0.514107 | 8_1:-47775726 | Msa1197490:CDS |
| ATACATTTATTATCAATCTA+GGG | 0.514210 | 8_1:+47773614 | None:intergenic |
| ACTCTGGAGGCCACTCATCA+TGG | 0.517171 | 8_1:-47776799 | Msa1197490:CDS |
| ATGTGGAGATTGGAGGAACT+TGG | 0.519523 | 8_1:-47774321 | Msa1197490:CDS |
| TGGCAGAAGAATGCCATCAC+AGG | 0.525499 | 8_1:-47773971 | Msa1197490:CDS |
| TGGCGGGAGTGGTTTAGTAT+TGG | 0.525717 | 8_1:+47778499 | None:intergenic |
| AGGCATGGCTAAGAGGGCAT+TGG | 0.527431 | 8_1:+47778336 | None:intergenic |
| CTCAAGGTGGGAAACCTGGA+TGG | 0.530408 | 8_1:-47777336 | Msa1197490:CDS |
| GGAGTGGTTTAGTATTGGAC+AGG | 0.530767 | 8_1:+47778504 | None:intergenic |
| AAGAAAGTCCTTCTTGGGAT+AGG | 0.531260 | 8_1:-47774812 | Msa1197490:CDS |
| GGTTGAGAGTGTTACTTCAT+GGG | 0.531477 | 8_1:-47778154 | Msa1197490:CDS |
| CTCAATTTAGATTACTCTGG+AGG | 0.532249 | 8_1:-47776812 | Msa1197490:intron |
| AGATTATTTGGATACAAGGT+GGG | 0.534032 | 8_1:-47778114 | Msa1197490:CDS |
| CCAATCTCCAGAAACATAGT+TGG | 0.538972 | 8_1:+47776760 | None:intergenic |
| TTTGGTTGAACCTGGAAATG+GGG | 0.542428 | 8_1:+47778298 | None:intergenic |
| CATCCAGGTTTCCCACCTTG+AGG | 0.543026 | 8_1:+47777337 | None:intergenic |
| TGGATTCGTTCAGTTAGTCT+GGG | 0.543480 | 8_1:-47775524 | Msa1197490:intron |
| ACTGCAGGAGTTTCAAGGGC+TGG | 0.545446 | 8_1:-47773991 | Msa1197490:intron |
| TTCGTTCAGTTAGTCTGGGA+AGG | 0.551066 | 8_1:-47775520 | Msa1197490:intron |
| GCATTGCCGAATCCTAGGAT+TGG | 0.555307 | 8_1:-47777310 | Msa1197490:CDS |
| ACTTCATGGGAAGAGTATAG+TGG | 0.562543 | 8_1:-47778141 | Msa1197490:CDS |
| AATTCGCCAAATAAATACAT+AGG | 0.564283 | 8_1:+47773640 | None:intergenic |
| TTGGATGATGATGATGAAGA+TGG | 0.565747 | 8_1:+47778410 | None:intergenic |
| CTCCGCGAGGAATCCTGTGA+TGG | 0.566946 | 8_1:+47773958 | None:intergenic |
| CTTGGAGGAGGGACTGATGT+CGG | 0.567295 | 8_1:-47775490 | Msa1197490:CDS |
| TGTGCAATAATTTCGCCACC+AGG | 0.572204 | 8_1:+47774253 | None:intergenic |
| AGGGTTGATTGAAGCAGGAT+CGG | 0.574754 | 8_1:+47778360 | None:intergenic |
| CCAGGTTTCCCACCTTGAGG+TGG | 0.575933 | 8_1:+47777340 | None:intergenic |
| AAGGACTTGGACTTGGAGGA+GGG | 0.577258 | 8_1:-47775501 | Msa1197490:CDS |
| GCAACAATTGTCTTTCATCA+CGG | 0.578990 | 8_1:+47778566 | None:intergenic |
| GCACCGAATATCCAGAAAGT+AGG | 0.580008 | 8_1:+47774371 | None:intergenic |
| CTTTCACTCAAATATTGCCA+AGG | 0.581283 | 8_1:+47773567 | None:intergenic |
| GGAGTTCCACATTTGCGTGA+AGG | 0.582715 | 8_1:-47777370 | Msa1197490:CDS |
| GAAACAAATGTGGAGATTGG+AGG | 0.582932 | 8_1:-47774328 | Msa1197490:CDS |
| GTGCCAATGGAAGATCCAAA+AGG | 0.584393 | 8_1:-47774352 | Msa1197490:CDS |
| ATGATGATGAAGATGGTTTG+AGG | 0.584796 | 8_1:+47778417 | None:intergenic |
| AAAGTCCTTCTTGGGATAGG+TGG | 0.587842 | 8_1:-47774809 | Msa1197490:CDS |
| AAGATTATTTGGATACAAGG+TGG | 0.591901 | 8_1:-47778115 | Msa1197490:CDS |
| ACATCACCTTCACGCAAATG+TGG | 0.592124 | 8_1:+47777364 | None:intergenic |
| TGGCTAAGAGGGCATTGGCA+GGG | 0.593618 | 8_1:+47778341 | None:intergenic |
| GTGGTGGACATTATGTGCCT+CGG | 0.594821 | 8_1:-47774790 | Msa1197490:CDS |
| CTGATGTCGGAAACTGGAGC+AGG | 0.596002 | 8_1:-47775477 | Msa1197490:intron |
| AATGTGCAGATTGCAGACAT+AGG | 0.599856 | 8_1:-47773862 | Msa1197490:three_prime_UTR |
| CGAATCCTAGGATTGGACCT+TGG | 0.608468 | 8_1:-47777303 | Msa1197490:CDS |
| GAAGGTGATGTTCCACCTCA+AGG | 0.608473 | 8_1:-47777352 | Msa1197490:CDS |
| ATAGGGTGAACAGTGAGAGC+AGG | 0.610959 | 8_1:+47778023 | None:intergenic |
| TCTTCATCATCATCATCCAA+TGG | 0.620969 | 8_1:-47778407 | Msa1197490:CDS |
| GTGATGTTCCACCTCAAGGT+GGG | 0.625555 | 8_1:-47777348 | Msa1197490:CDS |
| TCAAGGTGGGAAACCTGGAT+GGG | 0.628133 | 8_1:-47777335 | Msa1197490:CDS |
| GTCCACCACCTATCCCAAGA+AGG | 0.636477 | 8_1:+47774804 | None:intergenic |
| TTGATGATCTAAGGCTGCTG+CGG | 0.636578 | 8_1:+47778458 | None:intergenic |
| TCCAAAAGGAGAAACAAATG+TGG | 0.637066 | 8_1:-47774338 | Msa1197490:CDS |
| AGTAAGGCACCTCAAACTCA+GGG | 0.641613 | 8_1:+47777239 | None:intergenic |
| GCAACGAGAAGAGACACCAT+TGG | 0.644130 | 8_1:+47778391 | None:intergenic |
| TCATGGGAAGAGTATAGTGG+TGG | 0.644528 | 8_1:-47778138 | Msa1197490:CDS |
| AACACTATATCCATATGCCG+AGG | 0.673664 | 8_1:+47774773 | None:intergenic |
| GGTGATGTTCCACCTCAAGG+TGG | 0.677793 | 8_1:-47777349 | Msa1197490:CDS |
| TGTCAATGGTCCATGATGAG+TGG | 0.698185 | 8_1:+47776789 | None:intergenic |
| TGCCATCACAGGATTCCTCG+CGG | 0.720531 | 8_1:-47773960 | Msa1197490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGTAAAAAATATG+TGG | + | chr8_1:47776263-47776282 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTTTTTTATTCA+AGG | + | chr8_1:47777670-47777689 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAGGAAAAA+GGG | + | chr8_1:47773841-47773860 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGAAAGGAAAA+AGG | + | chr8_1:47773842-47773861 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTGTTTTTTGT+TGG | - | chr8_1:47773885-47773904 | Msa1197490:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGTTGTTTTTTGTT+GGG | - | chr8_1:47773886-47773905 | Msa1197490:three_prime_UTR | 15.0% |
| !! | AAAAAGTAAGTAAAGTTTAT+AGG | - | chr8_1:47774458-47774477 | Msa1197490:intron | 15.0% |
| !! | AAAAGTAAGTAAAGTTTATA+GGG | - | chr8_1:47774459-47774478 | Msa1197490:intron | 15.0% |
| !!! | AAACATATATAACATTTTTC+CGG | - | chr8_1:47774487-47774506 | Msa1197490:intron | 15.0% |
| !! | TAATTTAATTCCAATTTGAA+CGG | - | chr8_1:47774915-47774934 | Msa1197490:intron | 15.0% |
| !!! | AAATATTATTTAAAAGCGTA+TGG | + | chr8_1:47776853-47776872 | None:intergenic | 15.0% |
| !!! | TTTGATTTTATTTTATCTTC+AGG | - | chr8_1:47777085-47777104 | Msa1197490:intron | 15.0% |
| !!! | AAATTTTCATCAATTTTAGA+AGG | + | chr8_1:47777229-47777248 | None:intergenic | 15.0% |
| !!! | ATTGATGAAAATTTTCTAAA+CGG | - | chr8_1:47777235-47777254 | Msa1197490:intron | 15.0% |
| !!! | TTTTAGAGATTTTTAATAGA+AGG | - | chr8_1:47778346-47778365 | Msa1197490:CDS | 15.0% |
| !! | ATACATTTATTATCAATCTA+GGG | + | chr8_1:47778499-47778518 | None:intergenic | 15.0% |
| !! | AAAAAAAAGAAAGGAAAAAG+GGG | + | chr8_1:47773840-47773859 | None:intergenic | 20.0% |
| !! | ATGAAGGAAAAAAAAAAGAA+AGG | + | chr8_1:47773849-47773868 | None:intergenic | 20.0% |
| !! | CAATAAATTGAGAAAAATGA+AGG | + | chr8_1:47773865-47773884 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTGTTTTTTGTTG+GGG | - | chr8_1:47773887-47773906 | Msa1197490:three_prime_UTR | 20.0% |
| !!! | TTAAAATCTTGTGTTTTTGT+AGG | - | chr8_1:47774719-47774738 | Msa1197490:intron | 20.0% |
| !! | AATTTAATTCCAATTTGAAC+GGG | - | chr8_1:47774916-47774935 | Msa1197490:intron | 20.0% |
| !! | GCTTAATATATTATGTTACA+TGG | - | chr8_1:47775103-47775122 | Msa1197490:intron | 20.0% |
| !!! | TATCAATCTAAAATACATCT+AGG | + | chr8_1:47775395-47775414 | None:intergenic | 20.0% |
| !! | ATCTGAAAACAAAATAATGA+AGG | + | chr8_1:47775508-47775527 | None:intergenic | 20.0% |
| !! | AAGATGAATATGAATTGAAA+AGG | + | chr8_1:47775561-47775580 | None:intergenic | 20.0% |
| !! | TATTGAAAACCAACAAAATA+TGG | + | chr8_1:47775622-47775641 | None:intergenic | 20.0% |
| !! | TTTACTGAAATGATATTGTT+TGG | - | chr8_1:47776566-47776585 | Msa1197490:intron | 20.0% |
| !!! | GAAAATATTTTGTTGTTAGT+TGG | - | chr8_1:47776673-47776692 | Msa1197490:intron | 20.0% |
| !! | ATGAACTAATTTGAGAAAAT+AGG | - | chr8_1:47776892-47776911 | Msa1197490:intron | 20.0% |
| !! | TGAACTAATTTGAGAAAATA+GGG | - | chr8_1:47776893-47776912 | Msa1197490:intron | 20.0% |
| !!! | TCATAATTGAATTTTCTGAT+TGG | - | chr8_1:47777382-47777401 | Msa1197490:intron | 20.0% |
| !! | TATGTTCCTATGTATTTATT+TGG | - | chr8_1:47778464-47778483 | Msa1197490:CDS | 20.0% |
| !! | CATACATTTATTATCAATCT+AGG | + | chr8_1:47778500-47778519 | None:intergenic | 20.0% |
| !! | TAATATGAATTTATTTGCCT+TGG | - | chr8_1:47778526-47778545 | Msa1197490:CDS | 20.0% |
| !!! | AAAGTGATTTTGATGATCTA+AGG | + | chr8_1:47773664-47773683 | None:intergenic | 25.0% |
| !!! | ATGAAAAGTTTTGTGAATGA+AGG | - | chr8_1:47773934-47773953 | Msa1197490:CDS | 25.0% |
| !!! | TGAAAAGTTTTGTGAATGAA+GGG | - | chr8_1:47773935-47773954 | Msa1197490:CDS | 25.0% |
| ! | AGAAGATGAAATTACCAATA+GGG | + | chr8_1:47774107-47774126 | None:intergenic | 25.0% |
| ! | ATATCTAATTGTCTACATGT+CGG | + | chr8_1:47774227-47774246 | None:intergenic | 25.0% |
| !! | TAGTTTCTGTCCAAATTTTT+CGG | - | chr8_1:47774371-47774390 | Msa1197490:CDS | 25.0% |
| !!! | AATACTAAAAAGTTGGTACA+AGG | - | chr8_1:47774421-47774440 | Msa1197490:intron | 25.0% |
| ! | AAATCATTAAACAACCCAAA+TGG | - | chr8_1:47774679-47774698 | Msa1197490:intron | 25.0% |
| ! | AGAAACATAAGAAAAGAGTA+AGG | + | chr8_1:47774890-47774909 | None:intergenic | 25.0% |
| ! | AGATAAAACTAGAACACAAA+AGG | + | chr8_1:47775014-47775033 | None:intergenic | 25.0% |
| !! | TGAATATTTCTGCAAATACA+TGG | - | chr8_1:47775056-47775075 | Msa1197490:intron | 25.0% |
| ! | ATGCAATATGCTTATAATAG+AGG | + | chr8_1:47775430-47775449 | None:intergenic | 25.0% |
| ! | TCAATACGAAATGAGATATT+AGG | - | chr8_1:47775636-47775655 | Msa1197490:intron | 25.0% |
| !! | TGTTAGTGCTCAATTTTTAT+TGG | - | chr8_1:47775806-47775825 | Msa1197490:intron | 25.0% |
| ! | TTGTCAAATAGTGACTATAA+CGG | - | chr8_1:47775899-47775918 | Msa1197490:intron | 25.0% |
| ! | TTATACTAAATACCATATCG+TGG | + | chr8_1:47775964-47775983 | None:intergenic | 25.0% |
| !! | TATAAAGTGTTACCAAATAC+CGG | - | chr8_1:47775979-47775998 | Msa1197490:intron | 25.0% |
| ! | TTATACTAAATACCATATCG+TGG | + | chr8_1:47775964-47775983 | None:intergenic | 25.0% |
| !! | TATAAAGTGTTACCAAATAC+CGG | - | chr8_1:47775979-47775998 | Msa1197490:intron | 25.0% |
| !! | TCAAACAAAAGTGATAATGT+TGG | + | chr8_1:47776154-47776173 | None:intergenic | 25.0% |
| !!! | ATTTCATCTTTTGAAACAGA+TGG | + | chr8_1:47776771-47776790 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTTTGACCTTGA+TGG | - | chr8_1:47776812-47776831 | Msa1197490:intron | 25.0% |
| !! | ATTATTTAAAAGCGTATGGA+AGG | + | chr8_1:47776849-47776868 | None:intergenic | 25.0% |
| ! | AAGTACTTATGTCAATAGAT+GGG | + | chr8_1:47776964-47776983 | None:intergenic | 25.0% |
| ! | CAATTATGAAGTCACTAAAA+TGG | + | chr8_1:47777371-47777390 | None:intergenic | 25.0% |
| ! | AATTACATTGATGAACAACA+TGG | - | chr8_1:47777447-47777466 | Msa1197490:intron | 25.0% |
| ! | ATTACATTGATGAACAACAT+GGG | - | chr8_1:47777448-47777467 | Msa1197490:intron | 25.0% |
| ! | TAGAACTCAAGACTAAAAAA+AGG | + | chr8_1:47777587-47777606 | None:intergenic | 25.0% |
| !! | TTTTTGCAATATAGGAAAGA+TGG | - | chr8_1:47777701-47777720 | Msa1197490:intron | 25.0% |
| !! | CTCTATTAGAGATAATTTTC+AGG | - | chr8_1:47778416-47778435 | Msa1197490:CDS | 25.0% |
| ! | AATTCGCCAAATAAATACAT+AGG | + | chr8_1:47778473-47778492 | None:intergenic | 25.0% |
| ! | GGGGTGTTTATAATGAATTT+AGG | - | chr8_1:47773906-47773925 | Msa1197490:exon | 30.0% |
| ! | TATAGTGGTGGAAGATTATT+TGG | - | chr8_1:47773984-47774003 | Msa1197490:CDS | 30.0% |
| TGGAAGATTATTTGGATACA+AGG | - | chr8_1:47773992-47774011 | Msa1197490:intron | 30.0% | |
| AAGATTATTTGGATACAAGG+TGG | - | chr8_1:47773995-47774014 | Msa1197490:intron | 30.0% | |
| AGATTATTTGGATACAAGGT+GGG | - | chr8_1:47773996-47774015 | Msa1197490:intron | 30.0% | |
| GAGAAGATGAAATTACCAAT+AGG | + | chr8_1:47774108-47774127 | None:intergenic | 30.0% | |
| ! | TCGCAATTTTTGAATTCGAA+TGG | + | chr8_1:47774398-47774417 | None:intergenic | 30.0% |
| GCGACTAAATACTAAAAAGT+TGG | - | chr8_1:47774414-47774433 | Msa1197490:intron | 30.0% | |
| !! | GTGTTTGGTAATGATATGTT+AGG | - | chr8_1:47774546-47774565 | Msa1197490:intron | 30.0% |
| TGTGTGAATGTTGTAAACTT+TGG | - | chr8_1:47774648-47774667 | Msa1197490:intron | 30.0% | |
| GTGTGAATGTTGTAAACTTT+GGG | - | chr8_1:47774649-47774668 | Msa1197490:intron | 30.0% | |
| TGTGAATGTTGTAAACTTTG+GGG | - | chr8_1:47774650-47774669 | Msa1197490:intron | 30.0% | |
| ! | ACTTCTGAAAAATATTGCTC+AGG | - | chr8_1:47774835-47774854 | Msa1197490:intron | 30.0% |
| AAAAGAAAACCCGTTCAAAT+TGG | + | chr8_1:47774928-47774947 | None:intergenic | 30.0% | |
| ! | CATAAAAAGTATGCAACAAG+TGG | + | chr8_1:47775272-47775291 | None:intergenic | 30.0% |
| TTCCTCAATTTAGATTACTC+TGG | - | chr8_1:47775295-47775314 | Msa1197490:intron | 30.0% | |
| ! | ATAGTTGGCTTATTTGTCAA+TGG | + | chr8_1:47775338-47775357 | None:intergenic | 30.0% |
| AAATAAGCCAACTATGTTTC+TGG | - | chr8_1:47775343-47775362 | Msa1197490:intron | 30.0% | |
| ! | CAATCTAAAATACATCTAGG+AGG | + | chr8_1:47775392-47775411 | None:intergenic | 30.0% |
| AAGAACTTAAACCATGTTCA+CGG | + | chr8_1:47775480-47775499 | None:intergenic | 30.0% | |
| AAATTACTGGAACTTTCATC+AGG | + | chr8_1:47775587-47775606 | None:intergenic | 30.0% | |
| ! | AAGAAGGTTCCATATTTTGT+TGG | - | chr8_1:47775610-47775629 | Msa1197490:intron | 30.0% |
| ! | GCTTCATTTTATTGCTCTTT+TGG | + | chr8_1:47775664-47775683 | None:intergenic | 30.0% |
| !! | GTGTTGTTTAAAATCCTGAA+TGG | + | chr8_1:47775762-47775781 | None:intergenic | 30.0% |
| ! | TATTTGACAACACTGGTTAA+GGG | + | chr8_1:47775889-47775908 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTACCAAATACC+GGG | - | chr8_1:47775980-47775999 | Msa1197490:intron | 30.0% |
| ! | ATAAAGTGTTACCAAATACC+GGG | - | chr8_1:47775980-47775999 | Msa1197490:intron | 30.0% |
| CTAGAAAAACTCTACAAATG+TGG | + | chr8_1:47776210-47776229 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTGAAGTAGTCTG+TGG | - | chr8_1:47776274-47776293 | Msa1197490:intron | 30.0% |
| ATTTCAGCTAGTATAACAAC+TGG | - | chr8_1:47776349-47776368 | Msa1197490:intron | 30.0% | |
| CAACTGGATAATTCTGATAT+AGG | - | chr8_1:47776365-47776384 | Msa1197490:intron | 30.0% | |
| TTCAAAATCAGAGGATCATA+TGG | + | chr8_1:47776799-47776818 | None:intergenic | 30.0% | |
| GGTCAAAATTTCAAAATCAG+AGG | + | chr8_1:47776808-47776827 | None:intergenic | 30.0% | |
| CAAGTACTTATGTCAATAGA+TGG | + | chr8_1:47776965-47776984 | None:intergenic | 30.0% | |
| TCAATGCAGAGACAATATTT+AGG | - | chr8_1:47777176-47777195 | Msa1197490:intron | 30.0% | |
| ATAAGAAGAAAGTCCTTCTT+GGG | - | chr8_1:47777293-47777312 | Msa1197490:CDS | 30.0% | |
| CTGCACACTTAAATAGATTA+TGG | - | chr8_1:47777419-47777438 | Msa1197490:intron | 30.0% | |
| !!! | TGCTTTGCTTTTTGCAATAT+AGG | - | chr8_1:47777693-47777712 | Msa1197490:intron | 30.0% |
| AATATAGGAAAGATGGTGTT+TGG | - | chr8_1:47777708-47777727 | Msa1197490:intron | 30.0% | |
| ATATAGGAAAGATGGTGTTT+GGG | - | chr8_1:47777709-47777728 | Msa1197490:intron | 30.0% | |
| TGCAAACAATTGATTACAGA+AGG | + | chr8_1:47777915-47777934 | None:intergenic | 30.0% | |
| ! | TACGATTTGAAACAGATAAC+AGG | - | chr8_1:47778048-47778067 | Msa1197490:CDS | 30.0% |
| TTTACCCTAAAATTTACTGC+AGG | - | chr8_1:47778104-47778123 | Msa1197490:CDS | 30.0% | |
| ! | AACTCCTGCAGTAAATTTTA+GGG | + | chr8_1:47778111-47778130 | None:intergenic | 30.0% |
| ! | AAACTCCTGCAGTAAATTTT+AGG | + | chr8_1:47778112-47778131 | None:intergenic | 30.0% |
| GACACTCAAAAGAAGTTATT+TGG | + | chr8_1:47778199-47778218 | None:intergenic | 30.0% | |
| !! | AATCACTTTTAGTGCAAATC+TGG | + | chr8_1:47778298-47778317 | None:intergenic | 30.0% |
| !! | TAATTTTCAGGCACTTTAGA+AGG | - | chr8_1:47778428-47778447 | Msa1197490:CDS | 30.0% |
| GCAACAATTGTCTTTCATCA+CGG | + | chr8_1:47773547-47773566 | None:intergenic | 35.0% | |
| GTTGTACATGACATGTTACT+TGG | - | chr8_1:47773569-47773588 | Msa1197490:three_prime_UTR | 35.0% | |
| ! | ATGATGATGAAGATGGTTTG+AGG | + | chr8_1:47773696-47773715 | None:intergenic | 35.0% |
| ! | TTGGATGATGATGATGAAGA+TGG | + | chr8_1:47773703-47773722 | None:intergenic | 35.0% |
| TCTTCATCATCATCATCCAA+TGG | - | chr8_1:47773703-47773722 | Msa1197490:three_prime_UTR | 35.0% | |
| !! | TTTTGGTTGAACCTGGAAAT+GGG | + | chr8_1:47773816-47773835 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTGAACCTGGAAA+TGG | + | chr8_1:47773817-47773836 | None:intergenic | 35.0% |
| ! | AGAAAGGAAAAAGGGGTTTT+TGG | + | chr8_1:47773833-47773852 | None:intergenic | 35.0% |
| AACCTACGAATTACGAAACA+TGG | - | chr8_1:47774176-47774195 | Msa1197490:intron | 35.0% | |
| TTGAACGTAGCTACATATGT+TGG | - | chr8_1:47774275-47774294 | Msa1197490:CDS | 35.0% | |
| TTCGAATGGACCGAAAAATT+TGG | + | chr8_1:47774384-47774403 | None:intergenic | 35.0% | |
| ! | TGAAGTGAAAAGAGTGTGTT+TGG | - | chr8_1:47774531-47774550 | Msa1197490:intron | 35.0% |
| TCATTAAACAACCCAAATGG+TGG | - | chr8_1:47774682-47774701 | Msa1197490:intron | 35.0% | |
| !! | TTTTTCAGAAGTCGTATCCA+AGG | + | chr8_1:47774827-47774846 | None:intergenic | 35.0% |
| TAACAATCAACAGGAAACTG+AGG | + | chr8_1:47774955-47774974 | None:intergenic | 35.0% | |
| CAACACAAGTAACAATCAAC+AGG | + | chr8_1:47774964-47774983 | None:intergenic | 35.0% | |
| ! | TTGTTACTTGTGTTGTGTGA+TGG | - | chr8_1:47774969-47774988 | Msa1197490:intron | 35.0% |
| TTAAGCCATCTTCCTCAAAT+GGG | + | chr8_1:47775089-47775108 | None:intergenic | 35.0% | |
| ATTAAGCCATCTTCCTCAAA+TGG | + | chr8_1:47775090-47775109 | None:intergenic | 35.0% | |
| CTCCAGAGTAATCTAAATTG+AGG | + | chr8_1:47775300-47775319 | None:intergenic | 35.0% | |
| CTCAATTTAGATTACTCTGG+AGG | - | chr8_1:47775298-47775317 | Msa1197490:intron | 35.0% | |
| CATACTTCATTTGTGCGTAA+CGG | - | chr8_1:47775711-47775730 | Msa1197490:CDS | 35.0% | |
| ATACTTCATTTGTGCGTAAC+GGG | - | chr8_1:47775712-47775731 | Msa1197490:CDS | 35.0% | |
| GAAATAGCCAACTCATCATT+TGG | - | chr8_1:47775846-47775865 | Msa1197490:intron | 35.0% | |
| ! | ATTTGACAACACTGGTTAAG+GGG | + | chr8_1:47775888-47775907 | None:intergenic | 35.0% |
| ! | CTATTTGACAACACTGGTTA+AGG | + | chr8_1:47775890-47775909 | None:intergenic | 35.0% |
| TAGTCACTATTTGACAACAC+TGG | + | chr8_1:47775896-47775915 | None:intergenic | 35.0% | |
| ! | TAAAGTGTTACCAAATACCG+GGG | - | chr8_1:47775981-47776000 | Msa1197490:intron | 35.0% |
| ! | TAAAGTGTTACCAAATACCG+GGG | - | chr8_1:47775981-47776000 | Msa1197490:intron | 35.0% |
| AGAAAGAGATATCAGGTTTG+GGG | + | chr8_1:47776125-47776144 | None:intergenic | 35.0% | |
| CAGAAAGAGATATCAGGTTT+GGG | + | chr8_1:47776126-47776145 | None:intergenic | 35.0% | |
| ACAGAAAGAGATATCAGGTT+TGG | + | chr8_1:47776127-47776146 | None:intergenic | 35.0% | |
| !! | TATCACTTTTGTTTGATGCC+TGG | - | chr8_1:47776158-47776177 | Msa1197490:intron | 35.0% |
| AAACTCTACAAATGTGGACA+TGG | + | chr8_1:47776204-47776223 | None:intergenic | 35.0% | |
| TGTTAGTTGGCATTCTTGTT+TGG | - | chr8_1:47776686-47776705 | Msa1197490:intron | 35.0% | |
| AGGAATAGTATAGTCCATCA+AGG | + | chr8_1:47776829-47776848 | None:intergenic | 35.0% | |
| TATTGACATAAGTACTTGCG+AGG | - | chr8_1:47776967-47776986 | Msa1197490:intron | 35.0% | |
| GATAAGAAGAAAGTCCTTCT+TGG | - | chr8_1:47777292-47777311 | Msa1197490:CDS | 35.0% | |
| ! | TGAATTTTCTGATTGGCGAA+AGG | - | chr8_1:47777389-47777408 | Msa1197490:intron | 35.0% |
| ! | GAATTTTCTGATTGGCGAAA+GGG | - | chr8_1:47777390-47777409 | Msa1197490:intron | 35.0% |
| AGGCTAAAGTAGTCTAACTA+AGG | + | chr8_1:47777513-47777532 | None:intergenic | 35.0% | |
| GATGTGTTGCATATGAAATG+AGG | + | chr8_1:47777533-47777552 | None:intergenic | 35.0% | |
| TCACCTACTTTCTGGATATT+CGG | - | chr8_1:47777736-47777755 | Msa1197490:intron | 35.0% | |
| TCCAAAAGGAGAAACAAATG+TGG | - | chr8_1:47777772-47777791 | Msa1197490:intron | 35.0% | |
| !! | TCCACATTTGTTTCTCCTTT+TGG | + | chr8_1:47777776-47777795 | None:intergenic | 35.0% |
| GTCTATAAAAGCTGCATATG+AGG | - | chr8_1:47777817-47777836 | Msa1197490:intron | 35.0% | |
| ! | ATGCTCGTTAAGCTTACTTT+TGG | + | chr8_1:47777889-47777908 | None:intergenic | 35.0% |
| AATTTACTGCAGGAGTTTCA+AGG | - | chr8_1:47778114-47778133 | Msa1197490:CDS | 35.0% | |
| ATTTACTGCAGGAGTTTCAA+GGG | - | chr8_1:47778115-47778134 | Msa1197490:CDS | 35.0% | |
| GCGGAGCAGAATATTAAAAT+TGG | - | chr8_1:47778169-47778188 | Msa1197490:CDS | 35.0% | |
| !!! | CTTTTGAGTGTCGATTTAAG+AGG | - | chr8_1:47778207-47778226 | Msa1197490:intron | 35.0% |
| CTTTCACTCAAATATTGCCA+AGG | + | chr8_1:47778546-47778565 | None:intergenic | 35.0% | |
| TGCGGTTTAGGTGAAAAAAG+GGG | + | chr8_1:47773637-47773656 | None:intergenic | 40.0% | |
| CTGCGGTTTAGGTGAAAAAA+GGG | + | chr8_1:47773638-47773657 | None:intergenic | 40.0% | |
| TTTGGTTGAACCTGGAAATG+GGG | + | chr8_1:47773815-47773834 | None:intergenic | 40.0% | |
| !! | GGTTGAGAGTGTTACTTCAT+GGG | - | chr8_1:47773956-47773975 | Msa1197490:CDS | 40.0% |
| ! | ACTTCATGGGAAGAGTATAG+TGG | - | chr8_1:47773969-47773988 | Msa1197490:CDS | 40.0% |
| TGCCATGTTTCGTAATTCGT+AGG | + | chr8_1:47774181-47774200 | None:intergenic | 40.0% | |
| TACGAAACATGGCATGTCAT+TGG | - | chr8_1:47774187-47774206 | Msa1197490:intron | 40.0% | |
| TCCACACTTCAAATTGAAGC+CGG | + | chr8_1:47774320-47774339 | None:intergenic | 40.0% | |
| ATTTGATGTCACCACCCAAA+TGG | - | chr8_1:47774589-47774608 | Msa1197490:intron | 40.0% | |
| CAAATCGACTGTGACCATTT+GGG | + | chr8_1:47774606-47774625 | None:intergenic | 40.0% | |
| TCAAATCGACTGTGACCATT+TGG | + | chr8_1:47774607-47774626 | None:intergenic | 40.0% | |
| ATTGTCTGTGACCACCATTT+GGG | + | chr8_1:47774696-47774715 | None:intergenic | 40.0% | |
| AATTGTCTGTGACCACCATT+TGG | + | chr8_1:47774697-47774716 | None:intergenic | 40.0% | |
| ! | CATGGATTGTTTCCCATTTG+AGG | - | chr8_1:47775074-47775093 | Msa1197490:intron | 40.0% |
| TGTTTCCCATTTGAGGAAGA+TGG | - | chr8_1:47775081-47775100 | Msa1197490:intron | 40.0% | |
| CCAATCTCCAGAAACATAGT+TGG | + | chr8_1:47775353-47775372 | None:intergenic | 40.0% | |
| !! | CCAACTATGTTTCTGGAGAT+TGG | - | chr8_1:47775350-47775369 | Msa1197490:intron | 40.0% |
| ! | GTTCCAGTAATTTGCGAAGA+AGG | - | chr8_1:47775594-47775613 | Msa1197490:intron | 40.0% |
| GAACCTTCTTCGCAAATTAC+TGG | + | chr8_1:47775600-47775619 | None:intergenic | 40.0% | |
| ! | TTTGACAACACTGGTTAAGG+GGG | + | chr8_1:47775887-47775906 | None:intergenic | 40.0% |
| ATCTCTGTTGTTCCACGATA+TGG | - | chr8_1:47775949-47775968 | Msa1197490:intron | 40.0% | |
| GCAACACAGAAAGAGATATC+AGG | + | chr8_1:47776132-47776151 | None:intergenic | 40.0% | |
| ! | TAGGTAGTACTGAAGACTAC+TGG | - | chr8_1:47776384-47776403 | Msa1197490:intron | 40.0% |
| ACAAGATGCTGCTCAAGTTA+TGG | - | chr8_1:47776412-47776431 | Msa1197490:intron | 40.0% | |
| GTAACAGAATGTATGCACAC+AGG | + | chr8_1:47776497-47776516 | None:intergenic | 40.0% | |
| TTGGATTCGTTCAGTTAGTC+TGG | - | chr8_1:47776585-47776604 | Msa1197490:intron | 40.0% | |
| ! | TGGATTCGTTCAGTTAGTCT+GGG | - | chr8_1:47776586-47776605 | Msa1197490:intron | 40.0% |
| !! | TGGCATTCTTGTTTGGTGTT+TGG | - | chr8_1:47776693-47776712 | Msa1197490:intron | 40.0% |
| GACACATGCGAAAGATGTTA+AGG | + | chr8_1:47776730-47776749 | None:intergenic | 40.0% | |
| AAGAAAGTCCTTCTTGGGAT+AGG | - | chr8_1:47777298-47777317 | Msa1197490:CDS | 40.0% | |
| AACACTATATCCATATGCCG+AGG | + | chr8_1:47777340-47777359 | None:intergenic | 40.0% | |
| ! | TCTCCTTTTGGATCTTCCAT+TGG | + | chr8_1:47777764-47777783 | None:intergenic | 40.0% |
| GGAGAAACAAATGTGGAGAT+TGG | - | chr8_1:47777779-47777798 | Msa1197490:intron | 40.0% | |
| GAAACAAATGTGGAGATTGG+AGG | - | chr8_1:47777782-47777801 | Msa1197490:intron | 40.0% | |
| !! | GCAACTAAATCTGCTTTTCC+TGG | - | chr8_1:47777839-47777858 | Msa1197490:intron | 40.0% |
| !! | ACTAAATCTGCTTTTCCTGG+TGG | - | chr8_1:47777842-47777861 | Msa1197490:intron | 40.0% |
| ! | TTTTAATATTCTGCTCCGCG+AGG | + | chr8_1:47778168-47778187 | None:intergenic | 40.0% |
| AATGTGCAGATTGCAGACAT+AGG | - | chr8_1:47778248-47778267 | Msa1197490:intron | 40.0% | |
| ! | GGAGTGGTTTAGTATTGGAC+AGG | + | chr8_1:47773609-47773628 | None:intergenic | 45.0% |
| TTAGGTGAAAAAAGGGGTGG+CGG | + | chr8_1:47773631-47773650 | None:intergenic | 45.0% | |
| GGTTTAGGTGAAAAAAGGGG+TGG | + | chr8_1:47773634-47773653 | None:intergenic | 45.0% | |
| GCTGCGGTTTAGGTGAAAAA+AGG | + | chr8_1:47773639-47773658 | None:intergenic | 45.0% | |
| ! | TTGATGATCTAAGGCTGCTG+CGG | + | chr8_1:47773655-47773674 | None:intergenic | 45.0% |
| ! | AGGGTTGATTGAAGCAGGAT+CGG | + | chr8_1:47773753-47773772 | None:intergenic | 45.0% |
| !!! | AAGGGGTTTTTGGTTGAACC+TGG | + | chr8_1:47773823-47773842 | None:intergenic | 45.0% |
| !! | GGGTTGAGAGTGTTACTTCA+TGG | - | chr8_1:47773955-47773974 | Msa1197490:CDS | 45.0% |
| ! | TCATGGGAAGAGTATAGTGG+TGG | - | chr8_1:47773972-47773991 | Msa1197490:CDS | 45.0% |
| TTTGGATACAAGGTGGGAAG+AGG | - | chr8_1:47774002-47774021 | Msa1197490:intron | 45.0% | |
| ACTTCAAATTGAAGCCGGTC+TGG | + | chr8_1:47774315-47774334 | None:intergenic | 45.0% | |
| ! | ACCGGCTTCAATTTGAAGTG+TGG | - | chr8_1:47774316-47774335 | Msa1197490:CDS | 45.0% |
| ACATCACCTTCACGCAAATG+TGG | + | chr8_1:47774749-47774768 | None:intergenic | 45.0% | |
| CAAGGTCCAATCCTAGGATT+CGG | + | chr8_1:47774809-47774828 | None:intergenic | 45.0% | |
| ! | AGTAAGGCACCTCAAACTCA+GGG | + | chr8_1:47774874-47774893 | None:intergenic | 45.0% |
| TGTCAATGGTCCATGATGAG+TGG | + | chr8_1:47775324-47775343 | None:intergenic | 45.0% | |
| TCAAGTTCGTACCGTGAACA+TGG | - | chr8_1:47775466-47775485 | Msa1197490:intron | 45.0% | |
| !!! | TGCGTAACGGGTATTTTTGC+TGG | - | chr8_1:47775724-47775743 | Msa1197490:CDS | 45.0% |
| GGAAGGACCAAATGATGAGT+TGG | + | chr8_1:47775856-47775875 | None:intergenic | 45.0% | |
| GCTTTAGCAGTTCCACGATA+TGG | - | chr8_1:47776003-47776022 | Msa1197490:intron | 45.0% | |
| !! | TGGGGATGAGTTGATCAGTT+GGG | + | chr8_1:47776107-47776126 | None:intergenic | 45.0% |
| !! | TTGGGGATGAGTTGATCAGT+TGG | + | chr8_1:47776108-47776127 | None:intergenic | 45.0% |
| GGACATGGATGAAAGCAGAA+AGG | + | chr8_1:47776189-47776208 | None:intergenic | 45.0% | |
| ! | TTCGTTCAGTTAGTCTGGGA+AGG | - | chr8_1:47776590-47776609 | Msa1197490:intron | 45.0% |
| GAGCGTACAGAAACAACTTG+TGG | - | chr8_1:47777000-47777019 | Msa1197490:intron | 45.0% | |
| AATTCTCACACTCTTCCTGC+AGG | - | chr8_1:47777263-47777282 | Msa1197490:CDS | 45.0% | |
| ATTCTCACACTCTTCCTGCA+GGG | - | chr8_1:47777264-47777283 | Msa1197490:CDS | 45.0% | |
| CTTCTTATCATTCTCCCTGC+AGG | + | chr8_1:47777281-47777300 | None:intergenic | 45.0% | |
| AAAGTCCTTCTTGGGATAGG+TGG | - | chr8_1:47777301-47777320 | Msa1197490:CDS | 45.0% | |
| ACATTATGTGCCTCGGCATA+TGG | - | chr8_1:47777327-47777346 | Msa1197490:CDS | 45.0% | |
| CATGGGAGTTAAAACTCCAC+TGG | - | chr8_1:47777465-47777484 | Msa1197490:intron | 45.0% | |
| CTCCACTGGAATGAAGACAA+AGG | - | chr8_1:47777479-47777498 | Msa1197490:intron | 45.0% | |
| CACCTTTGTCTTCATTCCAG+TGG | + | chr8_1:47777484-47777503 | None:intergenic | 45.0% | |
| CACTGGAATGAAGACAAAGG+TGG | - | chr8_1:47777482-47777501 | Msa1197490:intron | 45.0% | |
| AGGAAAGATGGTGTTTGGGT+TGG | - | chr8_1:47777713-47777732 | Msa1197490:intron | 45.0% | |
| GCACCGAATATCCAGAAAGT+AGG | + | chr8_1:47777742-47777761 | None:intergenic | 45.0% | |
| !! | TTCTGGATATTCGGTGCCAA+TGG | - | chr8_1:47777745-47777764 | Msa1197490:intron | 45.0% |
| GTGCCAATGGAAGATCCAAA+AGG | - | chr8_1:47777758-47777777 | Msa1197490:intron | 45.0% | |
| ATGTGGAGATTGGAGGAACT+TGG | - | chr8_1:47777789-47777808 | Msa1197490:intron | 45.0% | |
| TGTGCAATAATTTCGCCACC+AGG | + | chr8_1:47777860-47777879 | None:intergenic | 45.0% | |
| !! | TAATTCTTATAAAAAAAAAA+TGG | + | chr8_1:47774136-47774155 | None:intergenic | 5.0% |
| TGGCGGGAGTGGTTTAGTAT+TGG | + | chr8_1:47773614-47773633 | None:intergenic | 50.0% | |
| TAGGTGAAAAAAGGGGTGGC+GGG | + | chr8_1:47773630-47773649 | None:intergenic | 50.0% | |
| ! | ATCTAAGGCTGCTGCGGTTT+AGG | + | chr8_1:47773649-47773668 | None:intergenic | 50.0% |
| GCAACGAGAAGAGACACCAT+TGG | + | chr8_1:47773722-47773741 | None:intergenic | 50.0% | |
| ! | TTGGCAGGGTTGATTGAAGC+AGG | + | chr8_1:47773758-47773777 | None:intergenic | 50.0% |
| TTGAACCTGGAAATGGGGTC+CGG | + | chr8_1:47773810-47773829 | None:intergenic | 50.0% | |
| ACAAGGTGGGAAGAGGTTAC+TGG | - | chr8_1:47774009-47774028 | Msa1197490:intron | 50.0% | |
| ATAGGGTGAACAGTGAGAGC+AGG | + | chr8_1:47774090-47774109 | None:intergenic | 50.0% | |
| GCTCTCACTGTTCACCCTAT+TGG | - | chr8_1:47774090-47774109 | Msa1197490:intron | 50.0% | |
| ATCGACTGTGACCATTTGGG+TGG | + | chr8_1:47774603-47774622 | None:intergenic | 50.0% | |
| GGAGTTCCACATTTGCGTGA+AGG | - | chr8_1:47774740-47774759 | Msa1197490:intron | 50.0% | |
| GAAGGTGATGTTCCACCTCA+AGG | - | chr8_1:47774758-47774777 | Msa1197490:intron | 50.0% | |
| GTGATGTTCCACCTCAAGGT+GGG | - | chr8_1:47774762-47774781 | Msa1197490:intron | 50.0% | |
| TCAAGGTGGGAAACCTGGAT+GGG | - | chr8_1:47774775-47774794 | Msa1197490:CDS | 50.0% | |
| GCATTGCCGAATCCTAGGAT+TGG | - | chr8_1:47774800-47774819 | Msa1197490:CDS | 50.0% | |
| CGAATCCTAGGATTGGACCT+TGG | - | chr8_1:47774807-47774826 | Msa1197490:CDS | 50.0% | |
| CGTATCCAAGGTCCAATCCT+AGG | + | chr8_1:47774815-47774834 | None:intergenic | 50.0% | |
| CAGTCTGATCCCTGAGTTTG+AGG | - | chr8_1:47774862-47774881 | Msa1197490:intron | 50.0% | |
| ! | GAGTAAGGCACCTCAAACTC+AGG | + | chr8_1:47774875-47774894 | None:intergenic | 50.0% |
| GGTATCGCGAAAGTCCATTC+AGG | - | chr8_1:47775745-47775764 | Msa1197490:intron | 50.0% | |
| TTAAGGGGGTAGAGTGAGGA+AGG | + | chr8_1:47775873-47775892 | None:intergenic | 50.0% | |
| ACTGCTAAAGCCCCGGTATT+TGG | + | chr8_1:47775994-47776013 | None:intergenic | 50.0% | |
| TGTGCTAAAGCCCCGGTATT+TGG | + | chr8_1:47776048-47776067 | None:intergenic | 50.0% | |
| ! | GAGTTGATCAGTTGGGATCG+TGG | + | chr8_1:47776100-47776119 | None:intergenic | 50.0% |
| GAAAGCAGAAAGGAGTGACC+AGG | + | chr8_1:47776179-47776198 | None:intergenic | 50.0% | |
| TGCTGCTCAAGTTATGGCTC+AGG | - | chr8_1:47776418-47776437 | Msa1197490:intron | 50.0% | |
| ! | CAGTTAGTCTGGGAAGGACT+TGG | - | chr8_1:47776596-47776615 | Msa1197490:intron | 50.0% |
| AAGGACTTGGACTTGGAGGA+GGG | - | chr8_1:47776609-47776628 | Msa1197490:intron | 50.0% | |
| !! | GTGGTGGACATTATGTGCCT+CGG | - | chr8_1:47777320-47777339 | Msa1197490:CDS | 50.0% |
| !! | TGGGTTGGTCACCTACTTTC+TGG | - | chr8_1:47777728-47777747 | Msa1197490:intron | 50.0% |
| TGGCAGAAGAATGCCATCAC+AGG | - | chr8_1:47778139-47778158 | Msa1197490:CDS | 50.0% | |
| !! | TGGCTAAGAGGGCATTGGCA+GGG | + | chr8_1:47773772-47773791 | None:intergenic | 55.0% |
| !! | ATGGCTAAGAGGGCATTGGC+AGG | + | chr8_1:47773773-47773792 | None:intergenic | 55.0% |
| ! | AGGCATGGCTAAGAGGGCAT+TGG | + | chr8_1:47773777-47773796 | None:intergenic | 55.0% |
| AATGCCCTCTTAGCCATGCC+TGG | - | chr8_1:47773776-47773795 | Msa1197490:three_prime_UTR | 55.0% | |
| TGAACCTGGAAATGGGGTCC+GGG | + | chr8_1:47773809-47773828 | None:intergenic | 55.0% | |
| ATTGAAGCCGGTCTGGTGTC+TGG | + | chr8_1:47774308-47774327 | None:intergenic | 55.0% | |
| AGAGCACACTGCACACACAC+CGG | + | chr8_1:47774509-47774528 | None:intergenic | 55.0% | |
| GGTGATGTTCCACCTCAAGG+TGG | - | chr8_1:47774761-47774780 | Msa1197490:intron | 55.0% | |
| CATCCAGGTTTCCCACCTTG+AGG | + | chr8_1:47774776-47774795 | None:intergenic | 55.0% | |
| CTCAAGGTGGGAAACCTGGA+TGG | - | chr8_1:47774774-47774793 | Msa1197490:CDS | 55.0% | |
| ! | ACTCTGGAGGCCACTCATCA+TGG | - | chr8_1:47775311-47775330 | Msa1197490:intron | 55.0% |
| CTGGTTAAGGGGGTAGAGTG+AGG | + | chr8_1:47775877-47775896 | None:intergenic | 55.0% | |
| TCGTGGAACTGCTAAAGCCC+CGG | + | chr8_1:47776001-47776020 | None:intergenic | 55.0% | |
| CCACTACTGTGCTAAAGCCC+CGG | + | chr8_1:47776055-47776074 | None:intergenic | 55.0% | |
| GTCTGGGAAGGACTTGGACT+TGG | - | chr8_1:47776602-47776621 | Msa1197490:intron | 55.0% | |
| TGGGAAGGACTTGGACTTGG+AGG | - | chr8_1:47776605-47776624 | Msa1197490:intron | 55.0% | |
| GAAGGACTTGGACTTGGAGG+AGG | - | chr8_1:47776608-47776627 | Msa1197490:intron | 55.0% | |
| CTTGGAGGAGGGACTGATGT+CGG | - | chr8_1:47776620-47776639 | Msa1197490:intron | 55.0% | |
| GAGGGACTGATGTCGGAAAC+TGG | - | chr8_1:47776627-47776646 | Msa1197490:intron | 55.0% | |
| CTGATGTCGGAAACTGGAGC+AGG | - | chr8_1:47776633-47776652 | Msa1197490:intron | 55.0% | |
| GTCCTTCTTGGGATAGGTGG+TGG | - | chr8_1:47777304-47777323 | Msa1197490:CDS | 55.0% | |
| GTCCACCACCTATCCCAAGA+AGG | + | chr8_1:47777309-47777328 | None:intergenic | 55.0% | |
| ACTGCAGGAGTTTCAAGGGC+TGG | - | chr8_1:47778119-47778138 | Msa1197490:CDS | 55.0% | |
| TGCCATCACAGGATTCCTCG+CGG | - | chr8_1:47778150-47778169 | Msa1197490:CDS | 55.0% | |
| !! | GAAAAAAGGGGTGGCGGGAG+TGG | + | chr8_1:47773625-47773644 | None:intergenic | 60.0% |
| CCAGCCAGGCATGGCTAAGA+GGG | + | chr8_1:47773783-47773802 | None:intergenic | 60.0% | |
| TGTCGTGCCAGACACCAGAC+CGG | - | chr8_1:47774298-47774317 | Msa1197490:CDS | 60.0% | |
| CCAGGTTTCCCACCTTGAGG+TGG | + | chr8_1:47774773-47774792 | None:intergenic | 60.0% | |
| CCACCTCAAGGTGGGAAACC+TGG | - | chr8_1:47774770-47774789 | Msa1197490:intron | 60.0% | |
| TTCGGCAATGCTGCCCATCC+AGG | + | chr8_1:47774791-47774810 | None:intergenic | 60.0% | |
| GGGCAGCATTGCCGAATCCT+AGG | - | chr8_1:47774795-47774814 | Msa1197490:CDS | 60.0% | |
| ! | CCGGGGCTTTAGCACAGTAG+TGG | - | chr8_1:47776052-47776071 | Msa1197490:intron | 60.0% |
| CTCCGCGAGGAATCCTGTGA+TGG | + | chr8_1:47778155-47778174 | None:intergenic | 60.0% | |
| CCCTCTTAGCCATGCCTGGC+TGG | - | chr8_1:47773780-47773799 | Msa1197490:three_prime_UTR | 65.0% | |
| GCCAGCCAGGCATGGCTAAG+AGG | + | chr8_1:47773784-47773803 | None:intergenic | 65.0% | |
| GCAACCCGGACCCCATTTCC+AGG | - | chr8_1:47773802-47773821 | Msa1197490:three_prime_UTR | 65.0% | |
| GCCATGCCTGGCTGGCAACC+CGG | - | chr8_1:47773788-47773807 | Msa1197490:three_prime_UTR | 70.0% | |
| TCCGGGTTGCCAGCCAGGCA+TGG | + | chr8_1:47773792-47773811 | None:intergenic | 70.0% | |
| TGGGGTCCGGGTTGCCAGCC+AGG | + | chr8_1:47773797-47773816 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 47773539 | 47778593 | 47773539 | ID=Msa1197490;Name=Msa1197490 |
| chr8_1 | mRNA | 47773539 | 47778593 | 47773539 | ID=Msa1197490-mRNA-1;Parent=Msa1197490;Name=Msa1197490-mRNA-1;_AED=0.10;_eAED=0.10;_QI=42|1|1|1|1|1|9|380|360 |
| chr8_1 | exon | 47773539 | 47774006 | 47773539 | ID=Msa1197490-mRNA-1:exon:15164;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47774241 | 47774417 | 47774241 | ID=Msa1197490-mRNA-1:exon:15163;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47774773 | 47774847 | 47774773 | ID=Msa1197490-mRNA-1:exon:15162;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47775478 | 47775533 | 47775478 | ID=Msa1197490-mRNA-1:exon:15161;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47775693 | 47775745 | 47775693 | ID=Msa1197490-mRNA-1:exon:15160;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47776761 | 47776824 | 47776761 | ID=Msa1197490-mRNA-1:exon:15159;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47777249 | 47777391 | 47777249 | ID=Msa1197490-mRNA-1:exon:15158;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47778021 | 47778204 | 47778021 | ID=Msa1197490-mRNA-1:exon:15157;Parent=Msa1197490-mRNA-1 |
| chr8_1 | exon | 47778309 | 47778593 | 47778309 | ID=Msa1197490-mRNA-1:exon:15156;Parent=Msa1197490-mRNA-1 |
| chr8_1 | five_prime_UTR | 47778552 | 47778593 | 47778552 | ID=Msa1197490-mRNA-1:five_prime_utr;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47778309 | 47778551 | 47778309 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47778021 | 47778204 | 47778021 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47777249 | 47777391 | 47777249 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47776761 | 47776824 | 47776761 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47775693 | 47775745 | 47775693 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47775478 | 47775533 | 47775478 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47774773 | 47774847 | 47774773 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47774241 | 47774417 | 47774241 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | CDS | 47773919 | 47774006 | 47773919 | ID=Msa1197490-mRNA-1:cds;Parent=Msa1197490-mRNA-1 |
| chr8_1 | three_prime_UTR | 47773539 | 47773918 | 47773539 | ID=Msa1197490-mRNA-1:three_prime_utr;Parent=Msa1197490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
