Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199860 | XP_013446278.1 | 88.140 | 430 | 20 | 4 | 1 | 422 | 1 | 407 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199860 | sp|Q8IUF1|CBWD2_HUMAN | 33.506 | 385 | 194 | 9 | 50 | 417 | 34 | 373 | 6.65e-63 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0713070 | Msa1199860 | 0.843019 | 1.812113e-58 | -8.615850e-47 |
| Msa1199860 | Msa1252800 | 0.829234 | 5.769019e-55 | -8.615850e-47 |
| Msa1199860 | Msa1279110 | 0.831400 | 1.705901e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199860 | MtrunA17_Chr8g0369371 | 92.511 | 227 | 10 | 2 | 1 | 220 | 1 | 227 | 1.90e-149 | 423 |
| Msa1199860 | MtrunA17_Chr1g0212851 | 54.639 | 388 | 132 | 3 | 55 | 422 | 86 | 449 | 3.19e-136 | 398 |
| Msa1199860 | MtrunA17_Chr8g0369381 | 97.484 | 159 | 3 | 1 | 265 | 422 | 1 | 159 | 1.91e-110 | 321 |
| Msa1199860 | MtrunA17_Chr5g0418911 | 36.870 | 377 | 195 | 7 | 50 | 419 | 22 | 362 | 2.80e-69 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199860 | AT1G80480.1 | 52.381 | 441 | 165 | 4 | 3 | 422 | 28 | 444 | 1.34e-141 | 412 |
| Msa1199860 | AT1G15730.1 | 49.431 | 439 | 164 | 5 | 18 | 422 | 34 | 448 | 2.38e-134 | 393 |
| Msa1199860 | AT1G26520.1 | 34.974 | 386 | 203 | 8 | 42 | 420 | 28 | 372 | 1.20e-69 | 225 |
Find 99 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTTCTTATTATGGAAAT+TGG | 0.158974 | 8_1:-52171415 | None:intergenic |
| CAAATTAAGCAAGCTAAATT+TGG | 0.169496 | 8_1:+52174394 | Msa1199860:CDS |
| CATAATAAGAACTTCTATTA+TGG | 0.204148 | 8_1:+52171423 | Msa1199860:CDS |
| ACTTCTATTATGGAAGTTTC+AGG | 0.219627 | 8_1:+52171433 | Msa1199860:CDS |
| CGAACAACGATATGTGTTTC+AGG | 0.224645 | 8_1:+52177607 | Msa1199860:CDS |
| CATAATAGAAGTTCTTATTA+TGG | 0.232184 | 8_1:-52171422 | None:intergenic |
| AAAATAAAGTAGCACCTTTC+CGG | 0.251113 | 8_1:-52171541 | None:intergenic |
| GTATAATAGTTCTGTTGTTT+TGG | 0.291165 | 8_1:+52174067 | Msa1199860:CDS |
| GTTGACATAGACTTTGTTCT+TGG | 0.292756 | 8_1:+52174421 | Msa1199860:CDS |
| ATAAATAAGTTTGTGTTCAT+TGG | 0.307055 | 8_1:+52177798 | Msa1199860:CDS |
| TGTGTTCATTGGAAGGAATT+TGG | 0.339926 | 8_1:+52177809 | Msa1199860:CDS |
| GCCTCATTGACCACAAATCT+TGG | 0.344694 | 8_1:-52173220 | None:intergenic |
| GACATTATCATGGTCAATAA+TGG | 0.345998 | 8_1:+52172493 | Msa1199860:CDS |
| TTTGGTGAGGTTGATATTGA+TGG | 0.359152 | 8_1:+52172433 | Msa1199860:CDS |
| TTGCCTTGTTCAAAATAATT+CGG | 0.361312 | 8_1:-52173267 | None:intergenic |
| AGTTTCTGAGTATGTTAAAC+TGG | 0.363084 | 8_1:+52173138 | Msa1199860:CDS |
| ATGATTGAACAGTTTGGAAA+AGG | 0.370303 | 8_1:-52171374 | None:intergenic |
| TGAGAGATTGGTTGAAGAAA+AGG | 0.371870 | 8_1:+52177538 | Msa1199860:CDS |
| AGCTATCCGCTTGCCATGTT+GGG | 0.375881 | 8_1:-52172014 | None:intergenic |
| TCGGGCGGTGACTGTGGGTG+TGG | 0.376839 | 8_1:-52177903 | None:intergenic |
| CAGAACTATTATACTCATAT+TGG | 0.376886 | 8_1:-52174058 | None:intergenic |
| TGAAGATTGGCTTGAGAGAT+TGG | 0.396748 | 8_1:+52177526 | Msa1199860:CDS |
| GTACCATGTCCACAGTCATC+TGG | 0.405192 | 8_1:-52174648 | None:intergenic |
| AAATGCTGTTGGAGTTGGTT+AGG | 0.413967 | 8_1:+52172551 | Msa1199860:CDS |
| GATATTGACCAAGAAAATAA+AGG | 0.416680 | 8_1:+52173435 | Msa1199860:CDS |
| GTTCCAGCTACAATCATTAC+CGG | 0.419776 | 8_1:+52171507 | Msa1199860:CDS |
| GATGAAACTGCCCTCAGAAA+AGG | 0.437172 | 8_1:+52177831 | Msa1199860:CDS |
| CTGAGTATGTTAAACTGGAT+GGG | 0.443361 | 8_1:+52173143 | Msa1199860:CDS |
| TGATTGAACAGTTTGGAAAA+GGG | 0.447164 | 8_1:-52171373 | None:intergenic |
| AGAATCGAAGCTGAGGTAGA+AGG | 0.449213 | 8_1:+52174600 | Msa1199860:intron |
| TATACTTCGGGCGGTGACTG+TGG | 0.452949 | 8_1:-52177909 | None:intergenic |
| CAGCTATCCGCTTGCCATGT+TGG | 0.454491 | 8_1:-52172015 | None:intergenic |
| AGACACCTTTCATTCTGTAT+AGG | 0.455560 | 8_1:-52177568 | None:intergenic |
| GGGATGATGATTGAACAGTT+TGG | 0.457942 | 8_1:-52171380 | None:intergenic |
| ATCTGGGTGGCTTGCTGTAG+AGG | 0.460046 | 8_1:-52174631 | None:intergenic |
| GGAAATTGGAACGGAGTTGA+AGG | 0.461297 | 8_1:-52171401 | None:intergenic |
| ATTATCAACAGAAGCTTCTT+CGG | 0.462032 | 8_1:-52171481 | None:intergenic |
| TAGTCTAGTATTTAAAATGC+AGG | 0.465423 | 8_1:+52177868 | Msa1199860:exon |
| GCTAGTCATTCTTCTGTGAA+TGG | 0.465790 | 8_1:+52172466 | Msa1199860:CDS |
| TCTGAGTATGTTAAACTGGA+TGG | 0.474114 | 8_1:+52173142 | Msa1199860:CDS |
| CACATTGTTATTGAAACGAC+AGG | 0.475915 | 8_1:+52172595 | Msa1199860:CDS |
| AAAGTTTCAATAACAGGGGC+TGG | 0.476071 | 8_1:-52173100 | None:intergenic |
| CTGAAACACATATCGTTGTT+CGG | 0.476772 | 8_1:-52177606 | None:intergenic |
| AGTTAAAATGCTGTTGGAGT+TGG | 0.477006 | 8_1:+52172546 | Msa1199860:CDS |
| TGGTGGTTAAGGTTGAAGAT+TGG | 0.477272 | 8_1:+52177513 | Msa1199860:intron |
| ATAAGTTTGTGTTCATTGGA+AGG | 0.482316 | 8_1:+52177802 | Msa1199860:CDS |
| GACTTTGTTCTTGGTGTGGG+AGG | 0.487525 | 8_1:+52174430 | Msa1199860:CDS |
| CTTTCCGGAGCCGAGAAAAC+CGG | 0.492702 | 8_1:-52171526 | None:intergenic |
| CACCTCATTCAAATGTTGCA+TGG | 0.496351 | 8_1:-52173194 | None:intergenic |
| ATAGACTTTGTTCTTGGTGT+GGG | 0.501973 | 8_1:+52174427 | Msa1199860:CDS |
| AAACCGGTAATGATTGTAGC+TGG | 0.501976 | 8_1:-52171510 | None:intergenic |
| CGGGCGGTGACTGTGGGTGT+GGG | 0.502952 | 8_1:-52177902 | None:intergenic |
| AATTGTTGTCAGCATATCAA+TGG | 0.505862 | 8_1:+52174364 | Msa1199860:intron |
| GCCCTCAGAAAAGGCTTCAA+AGG | 0.510234 | 8_1:+52177840 | Msa1199860:CDS |
| AACAGAAGCTTCTTCGGCGT+GGG | 0.511430 | 8_1:-52171475 | None:intergenic |
| GAAGCTTCTTCGGCGTGGGT+TGG | 0.514826 | 8_1:-52171471 | None:intergenic |
| ATACAGAATGAAAGGTGTCT+TGG | 0.515270 | 8_1:+52177571 | Msa1199860:CDS |
| TTCGGCGTGGGTTGGAGCAG+AGG | 0.523249 | 8_1:-52171463 | None:intergenic |
| ATTGGTTGAAGAAAAGGAAG+AGG | 0.524498 | 8_1:+52177544 | Msa1199860:CDS |
| TACCATGTCCACAGTCATCT+GGG | 0.525702 | 8_1:-52174647 | None:intergenic |
| AGATCTAGTTAAAATGCTGT+TGG | 0.540723 | 8_1:+52172540 | Msa1199860:CDS |
| CATAGACTTTGTTCTTGGTG+TGG | 0.540782 | 8_1:+52174426 | Msa1199860:CDS |
| TCCTGGGCTGTCATCCAACA+TGG | 0.541582 | 8_1:-52177748 | None:intergenic |
| GGTTGATATTGATGGATCAC+TGG | 0.543342 | 8_1:+52172441 | Msa1199860:CDS |
| GATAGCTGTCATTGAAAATG+AGG | 0.545290 | 8_1:+52172030 | Msa1199860:CDS |
| TCTGGGTGGCTTGCTGTAGA+GGG | 0.549262 | 8_1:-52174630 | None:intergenic |
| TGAGTATGTTAAACTGGATG+GGG | 0.549852 | 8_1:+52173144 | Msa1199860:CDS |
| CAACAGAAGCTTCTTCGGCG+TGG | 0.550753 | 8_1:-52171476 | None:intergenic |
| CTCCTCGCACAGTGCAGCAT+AGG | 0.551587 | 8_1:-52172519 | None:intergenic |
| AGTCTAGTATTTAAAATGCA+GGG | 0.552617 | 8_1:+52177869 | Msa1199860:exon |
| ATACTTCGGGCGGTGACTGT+GGG | 0.555241 | 8_1:-52177908 | None:intergenic |
| TCTTATTATGGAAATTGGAA+CGG | 0.556311 | 8_1:-52171410 | None:intergenic |
| CACCCAGATGACTGTGGACA+TGG | 0.556680 | 8_1:+52174645 | Msa1199860:CDS |
| TGCCTATGCTGCACTGTGCG+AGG | 0.562778 | 8_1:+52172517 | Msa1199860:CDS |
| CTCTAGTGTCAGCATTGTTG+CGG | 0.564690 | 8_1:+52176376 | Msa1199860:CDS |
| AATGAAAGGTGTCTTGGCAG+TGG | 0.569935 | 8_1:+52177577 | Msa1199860:CDS |
| ATGTATCTACAGAACACAAA+GGG | 0.575635 | 8_1:+52176321 | Msa1199860:intron |
| GAAATTGGAACGGAGTTGAA+GGG | 0.576416 | 8_1:-52171400 | None:intergenic |
| GAGGACCTATACAGAATGAA+AGG | 0.576494 | 8_1:+52177563 | Msa1199860:CDS |
| TAGTGTCAGCATTGTTGCGG+AGG | 0.580263 | 8_1:+52176379 | Msa1199860:CDS |
| TTGTCAGCATATCAATGGAA+TGG | 0.580500 | 8_1:+52174369 | Msa1199860:intron |
| TCCATGTTGGATGACAGCCC+AGG | 0.585563 | 8_1:+52177747 | Msa1199860:CDS |
| CTGTTGTATGTAGTTTGGTG+AGG | 0.586467 | 8_1:+52172420 | Msa1199860:intron |
| CATATTCTCACATCCCAACA+TGG | 0.594416 | 8_1:+52172001 | Msa1199860:CDS |
| TGGGAGGATATGATATTCAG+AGG | 0.595050 | 8_1:+52174446 | Msa1199860:CDS |
| ACCAAGATTTGTGGTCAATG+AGG | 0.603516 | 8_1:+52173219 | Msa1199860:CDS |
| TGAGGTGAAACCAAGATTTG+TGG | 0.618768 | 8_1:+52173210 | Msa1199860:CDS |
| AAAGGTGTCTTGGCAGTGGA+TGG | 0.621292 | 8_1:+52177581 | Msa1199860:CDS |
| AGTGTCAGCATTGTTGCGGA+GGG | 0.630144 | 8_1:+52176380 | Msa1199860:CDS |
| GAATGGTGAAGACATTATCA+TGG | 0.630318 | 8_1:+52172483 | Msa1199860:CDS |
| TCACATCCCAACATGGCAAG+CGG | 0.641762 | 8_1:+52172008 | Msa1199860:CDS |
| TGCCATGCAACATTTGAATG+AGG | 0.646050 | 8_1:+52173192 | Msa1199860:CDS |
| CTTCTGAAGTATACTTCGGG+CGG | 0.647830 | 8_1:-52177918 | None:intergenic |
| GAGAATATGATTCAGAAGAG+TGG | 0.653863 | 8_1:-52171987 | None:intergenic |
| AATGTATCTACAGAACACAA+AGG | 0.658242 | 8_1:+52176320 | Msa1199860:intron |
| GGGAACTCTTGATCGTGATG+AGG | 0.670033 | 8_1:+52176400 | Msa1199860:CDS |
| ATATTGCAGAATCGAAGCTG+AGG | 0.670166 | 8_1:+52174593 | Msa1199860:intron |
| GCAAGCCACCCAGATGACTG+TGG | 0.685211 | 8_1:+52174639 | Msa1199860:CDS |
| CATGTCCACAGTCATCTGGG+TGG | 0.712242 | 8_1:-52174644 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATTATTCAATGAAA+AGG | + | chr8_1:52172796-52172815 | Msa1199860:intron | 10.0% |
| !! | AAAAAATTATTCAATGAAAA+GGG | + | chr8_1:52172797-52172816 | Msa1199860:intron | 10.0% |
| !! | AACAAATCAAAATAATAATA+AGG | + | chr8_1:52175107-52175126 | Msa1199860:intron | 10.0% |
| !! | ACAAATCAAAATAATAATAA+GGG | + | chr8_1:52175108-52175127 | Msa1199860:intron | 10.0% |
| !!! | TATTCTGATATTTTTTTAAA+TGG | - | chr8_1:52175236-52175255 | None:intergenic | 10.0% |
| !! | AATCAAATAAAATAAAACAT+AGG | - | chr8_1:52176155-52176174 | None:intergenic | 10.0% |
| !!! | TTTATTTTATTTGATTTCTT+TGG | + | chr8_1:52176159-52176178 | Msa1199860:intron | 10.0% |
| !!! | TGTTATTATTTCAAAATTTT+AGG | - | chr8_1:52176203-52176222 | None:intergenic | 10.0% |
| !! | AAAATATAAAAAAAATACTC+TGG | - | chr8_1:52176270-52176289 | None:intergenic | 10.0% |
| !! | TCAATATATAAATCAAAATA+GGG | - | chr8_1:52176616-52176635 | None:intergenic | 10.0% |
| !!! | ATCCAATGTTATATTTTTAT+TGG | + | chr8_1:52171871-52171890 | Msa1199860:intron | 15.0% |
| !! | ATCCAATAAAAATATAACAT+TGG | - | chr8_1:52171876-52171895 | None:intergenic | 15.0% |
| !!! | TATTCGATTGTTTTAAATAT+CGG | - | chr8_1:52173029-52173048 | None:intergenic | 15.0% |
| !!! | TTATTTTTCTTAATCTAACT+AGG | + | chr8_1:52173489-52173508 | Msa1199860:intron | 15.0% |
| !! | TGATATAATAAACAATATAC+AGG | - | chr8_1:52174274-52174293 | None:intergenic | 15.0% |
| !!! | AGATATTTCTTTTTAATTCA+TGG | + | chr8_1:52174341-52174360 | Msa1199860:intron | 15.0% |
| !!! | AAATAGAAATTTGTTGTTAA+CGG | + | chr8_1:52174759-52174778 | Msa1199860:intron | 15.0% |
| !! | AAGTAGTTATGATTATTAAA+CGG | - | chr8_1:52174941-52174960 | None:intergenic | 15.0% |
| !!! | TTTTGATTTGTTCTTAATTT+AGG | - | chr8_1:52175099-52175118 | None:intergenic | 15.0% |
| !! | CTCAATATATAAATCAAAAT+AGG | - | chr8_1:52176617-52176636 | None:intergenic | 15.0% |
| !!! | ATATTTTATATCATTAACCT+TGG | + | chr8_1:52177096-52177115 | Msa1199860:intron | 15.0% |
| !! | CATAATAGAAGTTCTTATTA+TGG | - | chr8_1:52171425-52171444 | None:intergenic | 20.0% |
| !! | CATAATAAGAACTTCTATTA+TGG | + | chr8_1:52171423-52171442 | Msa1199860:CDS | 20.0% |
| !! | AAAATAACTTCTACATAAGT+AGG | + | chr8_1:52171580-52171599 | Msa1199860:intron | 20.0% |
| !! | CCTTAAGTTATAAACTATTA+GGG | - | chr8_1:52171654-52171673 | None:intergenic | 20.0% |
| !! | ACCTTAAGTTATAAACTATT+AGG | - | chr8_1:52171655-52171674 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAATATTCAAGAC+CGG | + | chr8_1:52171824-52171843 | Msa1199860:intron | 20.0% |
| !!! | TAGAACTTATAGAATTTTTC+CGG | - | chr8_1:52171846-52171865 | None:intergenic | 20.0% |
| !! | ATATTAGTAACTTCACAATT+TGG | - | chr8_1:52172721-52172740 | None:intergenic | 20.0% |
| !! | TGAAAAAAGTTTCAATAACA+GGG | - | chr8_1:52173108-52173127 | None:intergenic | 20.0% |
| !!! | TTTACATTGGTAGTAAAATT+CGG | - | chr8_1:52173904-52173923 | None:intergenic | 20.0% |
| !!! | ATCAAGGATTAATAGTTTTA+TGG | + | chr8_1:52173969-52173988 | Msa1199860:intron | 20.0% |
| !!! | GCATTATAATTCTTGTTTTT+TGG | + | chr8_1:52174093-52174112 | Msa1199860:CDS | 20.0% |
| !! | TCTTCTTAAAATACTAAAGT+AGG | + | chr8_1:52174855-52174874 | Msa1199860:intron | 20.0% |
| !! | GATATTAATCCCTATTTATA+GGG | + | chr8_1:52175058-52175077 | Msa1199860:intron | 20.0% |
| !! | AATCAAAATAATAATAAGGG+AGG | + | chr8_1:52175111-52175130 | Msa1199860:intron | 20.0% |
| !! | TTAAGTCAGTTGTAATAAAA+GGG | + | chr8_1:52175901-52175920 | Msa1199860:intron | 20.0% |
| !! | GTATTATTGATGGAAAATAA+GGG | - | chr8_1:52176049-52176068 | None:intergenic | 20.0% |
| !! | AGTATTATTGATGGAAAATA+AGG | - | chr8_1:52176050-52176069 | None:intergenic | 20.0% |
| !!! | GCAATAATTTGTTTTTTTAG+AGG | + | chr8_1:52176428-52176447 | Msa1199860:intron | 20.0% |
| !!! | GTAAGACAATATTTTGTAAA+TGG | - | chr8_1:52176478-52176497 | None:intergenic | 20.0% |
| !!! | TTTCTAAATGGTTTTGTTAA+TGG | + | chr8_1:52176704-52176723 | Msa1199860:intron | 20.0% |
| !! | ACAATGTGTAGTATAAATTA+TGG | + | chr8_1:52176729-52176748 | Msa1199860:intron | 20.0% |
| !!! | AAAGGTTTGAAATTACAAAT+AGG | - | chr8_1:52177670-52177689 | None:intergenic | 20.0% |
| !!! | TTATTTATCTTCTTTTCGTT+GGG | - | chr8_1:52177786-52177805 | None:intergenic | 20.0% |
| !! | ATAAATAAGTTTGTGTTCAT+TGG | + | chr8_1:52177798-52177817 | Msa1199860:CDS | 20.0% |
| ! | TCTTATTATGGAAATTGGAA+CGG | - | chr8_1:52171413-52171432 | None:intergenic | 25.0% |
| ! | GAAGTTCTTATTATGGAAAT+TGG | - | chr8_1:52171418-52171437 | None:intergenic | 25.0% |
| ! | TTAAATTGTGTTTCCAAACA+AGG | + | chr8_1:52171628-52171647 | Msa1199860:intron | 25.0% |
| ! | CCCTAATAGTTTATAACTTA+AGG | + | chr8_1:52171651-52171670 | Msa1199860:intron | 25.0% |
| ! | TTGTTAGTTGCTGAAATAAA+AGG | - | chr8_1:52172110-52172129 | None:intergenic | 25.0% |
| !! | GCAACTAACAAATTTTGAAT+TGG | + | chr8_1:52172119-52172138 | Msa1199860:intron | 25.0% |
| !! | ATTTAGAGCAATTGTAAACA+AGG | + | chr8_1:52172317-52172336 | Msa1199860:intron | 25.0% |
| !! | TTTAGAGCAATTGTAAACAA+GGG | + | chr8_1:52172318-52172337 | Msa1199860:intron | 25.0% |
| ! | AGGATGTGTTCTTAATAATA+TGG | + | chr8_1:52172369-52172388 | Msa1199860:intron | 25.0% |
| ! | GGATGTGTTCTTAATAATAT+GGG | + | chr8_1:52172370-52172389 | Msa1199860:intron | 25.0% |
| ! | CAGTAATTCATGAAATTATC+TGG | + | chr8_1:52172397-52172416 | Msa1199860:intron | 25.0% |
| !! | TTAAGTTTTTGCAAAACACT+TGG | + | chr8_1:52172832-52172851 | Msa1199860:intron | 25.0% |
| ! | TGACCTTATCTAATTCTAAA+TGG | + | chr8_1:52172865-52172884 | Msa1199860:intron | 25.0% |
| !! | GAACCATTTAGAATTAGATA+AGG | - | chr8_1:52172871-52172890 | None:intergenic | 25.0% |
| !!! | TGTGTTGCTTAAAAATCTTT+AGG | + | chr8_1:52172908-52172927 | Msa1199860:intron | 25.0% |
| !!! | GTGTTGCTTAAAAATCTTTA+GGG | + | chr8_1:52172909-52172928 | Msa1199860:intron | 25.0% |
| !! | TCTCATGCATTTTTAAATGA+TGG | + | chr8_1:52172978-52172997 | Msa1199860:intron | 25.0% |
| ! | GAAAAAAGTTTCAATAACAG+GGG | - | chr8_1:52173107-52173126 | None:intergenic | 25.0% |
| ! | CTGAAAAAAGTTTCAATAAC+AGG | - | chr8_1:52173109-52173128 | None:intergenic | 25.0% |
| !! | TTGCCTTGTTCAAAATAATT+CGG | - | chr8_1:52173270-52173289 | None:intergenic | 25.0% |
| ! | GATATTGACCAAGAAAATAA+AGG | + | chr8_1:52173435-52173454 | Msa1199860:CDS | 25.0% |
| !! | TTTTCTTAATCTAACTAGGA+AGG | + | chr8_1:52173493-52173512 | Msa1199860:intron | 25.0% |
| ! | GAAATGTACAAATATGAAAC+CGG | + | chr8_1:52173544-52173563 | Msa1199860:intron | 25.0% |
| ! | AAATGTACAAATATGAAACC+GGG | + | chr8_1:52173545-52173564 | Msa1199860:intron | 25.0% |
| !! | TAACTGATATGGAGTTATTT+TGG | - | chr8_1:52173652-52173671 | None:intergenic | 25.0% |
| ! | GTAAAATTTAATGATGCGAT+TGG | - | chr8_1:52173869-52173888 | None:intergenic | 25.0% |
| !!! | ATTCCAAAACTTTGTTTTCA+CGG | + | chr8_1:52174004-52174023 | Msa1199860:intron | 25.0% |
| ! | CAGAACTATTATACTCATAT+TGG | - | chr8_1:52174061-52174080 | None:intergenic | 25.0% |
| !!! | GTATAATAGTTCTGTTGTTT+TGG | + | chr8_1:52174067-52174086 | Msa1199860:CDS | 25.0% |
| ! | TGTATGTACATGTGTATATT+GGG | + | chr8_1:52174196-52174215 | Msa1199860:intron | 25.0% |
| ! | ATCTTTAAGCATGATTTCTA+GGG | - | chr8_1:52174325-52174344 | None:intergenic | 25.0% |
| ! | TATCTTTAAGCATGATTTCT+AGG | - | chr8_1:52174326-52174345 | None:intergenic | 25.0% |
| ! | CAAATTAAGCAAGCTAAATT+TGG | + | chr8_1:52174394-52174413 | Msa1199860:CDS | 25.0% |
| ! | TAATTAAGAAAGTGACAACA+AGG | - | chr8_1:52174684-52174703 | None:intergenic | 25.0% |
| ! | TACAAGACTAGATTTCTATA+TGG | - | chr8_1:52174908-52174927 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGTGAGATTTA+AGG | + | chr8_1:52174960-52174979 | Msa1199860:intron | 25.0% |
| !! | TTTGTGAGATTTAAGGTAAA+AGG | + | chr8_1:52174967-52174986 | Msa1199860:intron | 25.0% |
| ! | CGATATTAATCCCTATTTAT+AGG | + | chr8_1:52175057-52175076 | Msa1199860:intron | 25.0% |
| ! | AAAATAATAATAAGGGAGGA+CGG | + | chr8_1:52175115-52175134 | Msa1199860:intron | 25.0% |
| ! | ACCAAAAACCAAAATGATAT+TGG | + | chr8_1:52175661-52175680 | Msa1199860:intron | 25.0% |
| ! | CCAAAAACCAAAATGATATT+GGG | + | chr8_1:52175662-52175681 | Msa1199860:intron | 25.0% |
| ! | GTTAAGTCAGTTGTAATAAA+AGG | + | chr8_1:52175900-52175919 | Msa1199860:intron | 25.0% |
| ! | TCTCTATTCTAACAAACTTA+GGG | - | chr8_1:52175962-52175981 | None:intergenic | 25.0% |
| ! | TATAGTTGTGTTTGAATCTT+TGG | + | chr8_1:52176103-52176122 | Msa1199860:intron | 25.0% |
| !! | TATTTTGTAAATGGTCAGAA+GGG | - | chr8_1:52176469-52176488 | None:intergenic | 25.0% |
| !! | ATATTTTGTAAATGGTCAGA+AGG | - | chr8_1:52176470-52176489 | None:intergenic | 25.0% |
| !! | AAATCAAAATAGGGTTGATT+AGG | - | chr8_1:52176607-52176626 | None:intergenic | 25.0% |
| ! | TATATTGAGAAACTAATCCT+TGG | + | chr8_1:52176628-52176647 | Msa1199860:intron | 25.0% |
| ! | ACTCTTATTGGATTTCTAAA+TGG | + | chr8_1:52176692-52176711 | Msa1199860:intron | 25.0% |
| ! | TCAAACAAGATGACTTTATT+GGG | - | chr8_1:52176940-52176959 | None:intergenic | 25.0% |
| ! | AATATGTATGTTGTATGAGT+AGG | + | chr8_1:52177061-52177080 | Msa1199860:intron | 25.0% |
| !!! | GTTAATCAGTGATTTTTTTC+TGG | + | chr8_1:52177310-52177329 | Msa1199860:intron | 25.0% |
| ! | ACCATTTAATGTGAAAGTAA+GGG | - | chr8_1:52177497-52177516 | None:intergenic | 25.0% |
| ! | ATTACAAATAGGCAATAGAA+TGG | - | chr8_1:52177659-52177678 | None:intergenic | 25.0% |
| ! | CCTGAAAGTAGTAATAAATA+GGG | - | chr8_1:52177719-52177738 | None:intergenic | 25.0% |
| ! | CCTATTTATTACTACTTTCA+GGG | + | chr8_1:52177717-52177736 | Msa1199860:intron | 25.0% |
| ! | CTATTTATTACTACTTTCAG+GGG | + | chr8_1:52177718-52177737 | Msa1199860:intron | 25.0% |
| ! | TATTTATTACTACTTTCAGG+GGG | + | chr8_1:52177719-52177738 | Msa1199860:intron | 25.0% |
| !! | CTTATTTATCTTCTTTTCGT+TGG | - | chr8_1:52177787-52177806 | None:intergenic | 25.0% |
| !! | TAGTCTAGTATTTAAAATGC+AGG | + | chr8_1:52177868-52177887 | Msa1199860:exon | 25.0% |
| !! | AGTCTAGTATTTAAAATGCA+GGG | + | chr8_1:52177869-52177888 | Msa1199860:exon | 25.0% |
| TGATTGAACAGTTTGGAAAA+GGG | - | chr8_1:52171376-52171395 | None:intergenic | 30.0% | |
| ATGATTGAACAGTTTGGAAA+AGG | - | chr8_1:52171377-52171396 | None:intergenic | 30.0% | |
| ACTTCTATTATGGAAGTTTC+AGG | + | chr8_1:52171433-52171452 | Msa1199860:CDS | 30.0% | |
| ATTATCAACAGAAGCTTCTT+CGG | - | chr8_1:52171484-52171503 | None:intergenic | 30.0% | |
| AAAATAAAGTAGCACCTTTC+CGG | - | chr8_1:52171544-52171563 | None:intergenic | 30.0% | |
| AACACAACTTCTATGATTGA+TGG | + | chr8_1:52171701-52171720 | Msa1199860:intron | 30.0% | |
| AACCTATGAAAACAAACCAT+CGG | + | chr8_1:52172188-52172207 | Msa1199860:intron | 30.0% | |
| GACATTATCATGGTCAATAA+TGG | + | chr8_1:52172493-52172512 | Msa1199860:CDS | 30.0% | |
| AGATCTAGTTAAAATGCTGT+TGG | + | chr8_1:52172540-52172559 | Msa1199860:CDS | 30.0% | |
| CTAAAGCTTCCAAAAAAAGT+TGG | - | chr8_1:52172954-52172973 | None:intergenic | 30.0% | |
| ! | TACATTCTTAACTGTTTTGC+AGG | + | chr8_1:52173067-52173086 | Msa1199860:intron | 30.0% |
| AGTTTCTGAGTATGTTAAAC+TGG | + | chr8_1:52173138-52173157 | Msa1199860:CDS | 30.0% | |
| !!! | TGACCGAATTATTTTGAACA+AGG | + | chr8_1:52173264-52173283 | Msa1199860:CDS | 30.0% |
| ! | CTTTAACTTTGTTTCTCTTG+TGG | + | chr8_1:52173328-52173347 | Msa1199860:intron | 30.0% |
| !!! | GAAACACACCTTTATTTTCT+TGG | - | chr8_1:52173446-52173465 | None:intergenic | 30.0% |
| !!! | ATATGGAGTTATTTTGGTCA+TGG | - | chr8_1:52173646-52173665 | None:intergenic | 30.0% |
| TACTCAGGAAATAACTGATA+TGG | - | chr8_1:52173663-52173682 | None:intergenic | 30.0% | |
| TTAAACAATGCTGCATACTT+GGG | - | chr8_1:52173792-52173811 | None:intergenic | 30.0% | |
| TTTAAACAATGCTGCATACT+TGG | - | chr8_1:52173793-52173812 | None:intergenic | 30.0% | |
| AGTATGCAGCATTGTTTAAA+TGG | + | chr8_1:52173793-52173812 | Msa1199860:intron | 30.0% | |
| !!! | GGAAGGGTTTTTTTTTACAT+TGG | - | chr8_1:52173917-52173936 | None:intergenic | 30.0% |
| TTGATCATTGACCAATTGAA+AGG | - | chr8_1:52173954-52173973 | None:intergenic | 30.0% | |
| TTTCAATTGGTCAATGATCA+AGG | + | chr8_1:52173953-52173972 | Msa1199860:intron | 30.0% | |
| !!! | AATTCTTGTTTTTTGGCAGA+AGG | + | chr8_1:52174100-52174119 | Msa1199860:CDS | 30.0% |
| CTGTATGTACATGTGTATAT+TGG | + | chr8_1:52174195-52174214 | Msa1199860:intron | 30.0% | |
| GTATGTACATGTGTATATTG+GGG | + | chr8_1:52174197-52174216 | Msa1199860:intron | 30.0% | |
| AATTGTTGTCAGCATATCAA+TGG | + | chr8_1:52174364-52174383 | Msa1199860:intron | 30.0% | |
| ATATGATATTCAGAGGTAAG+AGG | + | chr8_1:52174453-52174472 | Msa1199860:intron | 30.0% | |
| ! | TAATTTGCAGCAAATACAGA+CGG | - | chr8_1:52174547-52174566 | None:intergenic | 30.0% |
| !!! | ATTTTAAGAAGAGAAGCATC+TGG | - | chr8_1:52174847-52174866 | None:intergenic | 30.0% |
| TCTGTGTATCCCTATAAATA+GGG | - | chr8_1:52175070-52175089 | None:intergenic | 30.0% | |
| !! | AGCTTGTTATAAATATACCC+TGG | + | chr8_1:52175351-52175370 | Msa1199860:intron | 30.0% |
| ! | GTTACGTTTTATCTTTTCCA+GGG | - | chr8_1:52175371-52175390 | None:intergenic | 30.0% |
| ! | TGTTACGTTTTATCTTTTCC+AGG | - | chr8_1:52175372-52175391 | None:intergenic | 30.0% |
| AAGCTTAATCACTTAACAGA+AGG | + | chr8_1:52175541-52175560 | Msa1199860:intron | 30.0% | |
| AACCAAACTGCAATGATATT+AGG | + | chr8_1:52175586-52175605 | Msa1199860:intron | 30.0% | |
| AAAATGAGGCCTTAATTGAA+AGG | + | chr8_1:52175625-52175644 | Msa1199860:intron | 30.0% | |
| !!! | TTTTGGTTTTTGGTTTGATG+TGG | - | chr8_1:52175655-52175674 | None:intergenic | 30.0% |
| !!! | CCCAATATCATTTTGGTTTT+TGG | - | chr8_1:52175665-52175684 | None:intergenic | 30.0% |
| ACTTCAAACAAACAGAGAAA+AGG | + | chr8_1:52175720-52175739 | Msa1199860:intron | 30.0% | |
| TTAGTCTCATGATGCATTAA+CGG | - | chr8_1:52175773-52175792 | None:intergenic | 30.0% | |
| TTAATGCATCATGAGACTAA+GGG | + | chr8_1:52175773-52175792 | Msa1199860:intron | 30.0% | |
| TATAAACCCTCCATATCTTT+GGG | - | chr8_1:52175799-52175818 | None:intergenic | 30.0% | |
| CTCTCTATTCTAACAAACTT+AGG | - | chr8_1:52175963-52175982 | None:intergenic | 30.0% | |
| AATGTATCTACAGAACACAA+AGG | + | chr8_1:52176320-52176339 | Msa1199860:intron | 30.0% | |
| ATGTATCTACAGAACACAAA+GGG | + | chr8_1:52176321-52176340 | Msa1199860:intron | 30.0% | |
| !!! | TTTTTGTTGATGGCTTTGTT+TGG | + | chr8_1:52176554-52176573 | Msa1199860:intron | 30.0% |
| TTAGAAATCCAATAAGAGTG+TGG | - | chr8_1:52176691-52176710 | None:intergenic | 30.0% | |
| TGCATTGTATGTAACTTATG+TGG | - | chr8_1:52176831-52176850 | None:intergenic | 30.0% | |
| GTCAAACAAGATGACTTTAT+TGG | - | chr8_1:52176941-52176960 | None:intergenic | 30.0% | |
| CATACATATTTGTGACTTCA+TGG | - | chr8_1:52177051-52177070 | None:intergenic | 30.0% | |
| !!! | GTTAATCGGTGATTTTTTTC+TGG | + | chr8_1:52177451-52177470 | Msa1199860:intron | 30.0% |
| TCCCTTACTTTCACATTAAA+TGG | + | chr8_1:52177493-52177512 | Msa1199860:intron | 30.0% | |
| CACCATTTAATGTGAAAGTA+AGG | - | chr8_1:52177498-52177517 | None:intergenic | 30.0% | |
| CTTACTTTCACATTAAATGG+TGG | + | chr8_1:52177496-52177515 | Msa1199860:intron | 30.0% | |
| TTCACATTAAATGGTGGTTA+AGG | + | chr8_1:52177502-52177521 | Msa1199860:intron | 30.0% | |
| TGAGCAAATTCGAATTCAAA+AGG | - | chr8_1:52177688-52177707 | None:intergenic | 30.0% | |
| CCCTATTTATTACTACTTTC+AGG | + | chr8_1:52177716-52177735 | Msa1199860:intron | 30.0% | |
| CCCTGAAAGTAGTAATAAAT+AGG | - | chr8_1:52177720-52177739 | None:intergenic | 30.0% | |
| ATAAGTTTGTGTTCATTGGA+AGG | + | chr8_1:52177802-52177821 | Msa1199860:CDS | 30.0% | |
| !! | AGTTTGGAAAAGGGTTTTGA+CGG | - | chr8_1:52171367-52171386 | None:intergenic | 35.0% |
| !!! | ACAATCATTACCGGTTTTCT+CGG | + | chr8_1:52171516-52171535 | Msa1199860:CDS | 35.0% |
| !! | TAAACTATTAGGGCCTTGTT+TGG | - | chr8_1:52171644-52171663 | None:intergenic | 35.0% |
| !! | GTGTTGCTTATATTCGAGAT+TGG | - | chr8_1:52171686-52171705 | None:intergenic | 35.0% |
| !! | TATTAGAGTACTGCTTAGCT+AGG | + | chr8_1:52171924-52171943 | Msa1199860:intron | 35.0% |
| GAGAATATGATTCAGAAGAG+TGG | - | chr8_1:52171990-52172009 | None:intergenic | 35.0% | |
| GATAGCTGTCATTGAAAATG+AGG | + | chr8_1:52172030-52172049 | Msa1199860:CDS | 35.0% | |
| TGTTCTACACTCAATAACTG+TGG | + | chr8_1:52172062-52172081 | Msa1199860:intron | 35.0% | |
| GTTCTACACTCAATAACTGT+GGG | + | chr8_1:52172063-52172082 | Msa1199860:intron | 35.0% | |
| TTGCTGAAATAAAAGGCTGT+CGG | - | chr8_1:52172103-52172122 | None:intergenic | 35.0% | |
| !!! | TACCGATGGTTTGTTTTCAT+AGG | - | chr8_1:52172193-52172212 | None:intergenic | 35.0% |
| TAACAGGAAAAAGATACCGA+TGG | - | chr8_1:52172207-52172226 | None:intergenic | 35.0% | |
| !! | TTTGGTGAGGTTGATATTGA+TGG | + | chr8_1:52172433-52172452 | Msa1199860:CDS | 35.0% |
| GAATGGTGAAGACATTATCA+TGG | + | chr8_1:52172483-52172502 | Msa1199860:CDS | 35.0% | |
| AGTTAAAATGCTGTTGGAGT+TGG | + | chr8_1:52172546-52172565 | Msa1199860:CDS | 35.0% | |
| ! | CACATTGTTATTGAAACGAC+AGG | + | chr8_1:52172595-52172614 | Msa1199860:CDS | 35.0% |
| ! | AGATTTTGTGCTTTGTGTAC+TGG | + | chr8_1:52172643-52172662 | Msa1199860:intron | 35.0% |
| ! | GATTTTGTGCTTTGTGTACT+GGG | + | chr8_1:52172644-52172663 | Msa1199860:intron | 35.0% |
| ! | ATTTTGTGCTTTGTGTACTG+GGG | + | chr8_1:52172645-52172664 | Msa1199860:intron | 35.0% |
| TGCCTGAAATTCACTTTGTT+TGG | + | chr8_1:52172743-52172762 | Msa1199860:intron | 35.0% | |
| ! | GCCTGAAATTCACTTTGTTT+GGG | + | chr8_1:52172744-52172763 | Msa1199860:intron | 35.0% |
| TCCCAAACAAAGTGAATTTC+AGG | - | chr8_1:52172748-52172767 | None:intergenic | 35.0% | |
| AAAAGTTGGAGAACCATGAA+GGG | - | chr8_1:52172940-52172959 | None:intergenic | 35.0% | |
| AAAAAGTTGGAGAACCATGA+AGG | - | chr8_1:52172941-52172960 | None:intergenic | 35.0% | |
| !!! | CATGGTTCTCCAACTTTTTT+TGG | + | chr8_1:52172942-52172961 | Msa1199860:intron | 35.0% |
| TCTGAGTATGTTAAACTGGA+TGG | + | chr8_1:52173142-52173161 | Msa1199860:CDS | 35.0% | |
| CTGAGTATGTTAAACTGGAT+GGG | + | chr8_1:52173143-52173162 | Msa1199860:CDS | 35.0% | |
| TGAGTATGTTAAACTGGATG+GGG | + | chr8_1:52173144-52173163 | Msa1199860:CDS | 35.0% | |
| !! | CTTGCTTTTGCAGATAGATT+TGG | + | chr8_1:52173393-52173412 | Msa1199860:intron | 35.0% |
| ACATGTTCATTTCATGAACC+CGG | - | chr8_1:52173566-52173585 | None:intergenic | 35.0% | |
| ! | TGTTCTGAATTACACTACTC+AGG | - | chr8_1:52173678-52173697 | None:intergenic | 35.0% |
| ATTGCAAAAATTCACCTCCA+TGG | + | chr8_1:52173719-52173738 | Msa1199860:intron | 35.0% | |
| !! | ATGCTATCTTGACTTGCTAA+AGG | + | chr8_1:52173754-52173773 | Msa1199860:intron | 35.0% |
| !! | TGCTATCTTGACTTGCTAAA+GGG | + | chr8_1:52173755-52173774 | Msa1199860:intron | 35.0% |
| ATGCAGCATTGTTTAAATGG+TGG | + | chr8_1:52173796-52173815 | Msa1199860:intron | 35.0% | |
| ! | GCATTGTTTAAATGGTGGAA+TGG | + | chr8_1:52173801-52173820 | Msa1199860:intron | 35.0% |
| TGAAAGGCAGTCTTAGAATA+CGG | - | chr8_1:52173938-52173957 | None:intergenic | 35.0% | |
| !! | TTCTAAGACTGCCTTTCAAT+TGG | + | chr8_1:52173940-52173959 | Msa1199860:intron | 35.0% |
| ! | TCACCGTGAAAACAAAGTTT+TGG | - | chr8_1:52174010-52174029 | None:intergenic | 35.0% |
| ACTCATATTGGAAGATCTAC+AGG | - | chr8_1:52174049-52174068 | None:intergenic | 35.0% | |
| TTGTCAGCATATCAATGGAA+TGG | + | chr8_1:52174369-52174388 | Msa1199860:intron | 35.0% | |
| GTTGACATAGACTTTGTTCT+TGG | + | chr8_1:52174421-52174440 | Msa1199860:CDS | 35.0% | |
| ! | ATAGACTTTGTTCTTGGTGT+GGG | + | chr8_1:52174427-52174446 | Msa1199860:CDS | 35.0% |
| ! | AAGTGACAACAAGGTTCTAA+GGG | - | chr8_1:52174675-52174694 | None:intergenic | 35.0% |
| AAAGTGACAACAAGGTTCTA+AGG | - | chr8_1:52174676-52174695 | None:intergenic | 35.0% | |
| GCAGTCAACTATAACAAGAA+AGG | - | chr8_1:52174718-52174737 | None:intergenic | 35.0% | |
| TTATAGTTGACTGCAGTATG+AGG | + | chr8_1:52174724-52174743 | Msa1199860:intron | 35.0% | |
| !! | TTTGTTGTTAACGGATCATG+TGG | + | chr8_1:52174768-52174787 | Msa1199860:intron | 35.0% |
| GTCTGTGTATCCCTATAAAT+AGG | - | chr8_1:52175071-52175090 | None:intergenic | 35.0% | |
| AAACGTAACAACTGTGACAA+TGG | + | chr8_1:52175382-52175401 | Msa1199860:intron | 35.0% | |
| ATTGGCGTTCTTGATTCTTT+GGG | - | chr8_1:52175467-52175486 | None:intergenic | 35.0% | |
| AATTGGCGTTCTTGATTCTT+TGG | - | chr8_1:52175468-52175487 | None:intergenic | 35.0% | |
| AAGAATCAAGAACGCCAATT+TGG | + | chr8_1:52175468-52175487 | Msa1199860:intron | 35.0% | |
| AGAATCAAGAACGCCAATTT+GGG | + | chr8_1:52175469-52175488 | Msa1199860:intron | 35.0% | |
| ! | TCAATTAAGGCCTCATTTTC+TGG | - | chr8_1:52175624-52175643 | None:intergenic | 35.0% |
| !! | ACAAACAGAGAAAAGGTGTT+AGG | + | chr8_1:52175727-52175746 | Msa1199860:intron | 35.0% |
| GTTAATGCATCATGAGACTA+AGG | + | chr8_1:52175772-52175791 | Msa1199860:intron | 35.0% | |
| GTATAAACCCTCCATATCTT+TGG | - | chr8_1:52175800-52175819 | None:intergenic | 35.0% | |
| AAGGGATTTACAGAGGAAAA+TGG | - | chr8_1:52176031-52176050 | None:intergenic | 35.0% | |
| GGAAAATAAGGGATTTACAG+AGG | - | chr8_1:52176038-52176057 | None:intergenic | 35.0% | |
| CGAAGCTTCAGTATTATTGA+TGG | - | chr8_1:52176059-52176078 | None:intergenic | 35.0% | |
| TTCCTAACAGCTCAATCTTT+CGG | + | chr8_1:52176126-52176145 | Msa1199860:intron | 35.0% | |
| TGTTTCAACATTCACATCGA+TGG | + | chr8_1:52176530-52176549 | Msa1199860:intron | 35.0% | |
| !!! | CATCGATGGTTTTTTGTTGA+TGG | + | chr8_1:52176544-52176563 | Msa1199860:intron | 35.0% |
| TTGGTCATCATGATTGATTG+AGG | - | chr8_1:52176655-52176674 | None:intergenic | 35.0% | |
| ATCATGATGACCAAGTTAAC+AGG | + | chr8_1:52176661-52176680 | Msa1199860:intron | 35.0% | |
| ACTATGCATTCTTAAAGCCT+TGG | - | chr8_1:52176882-52176901 | None:intergenic | 35.0% | |
| ACAAGATGACTTTATTGGGT+TGG | - | chr8_1:52176936-52176955 | None:intergenic | 35.0% | |
| ACTTCATGGAGAAATGAGAA+TGG | - | chr8_1:52177037-52177056 | None:intergenic | 35.0% | |
| ACAACCTCTTGTGTAAAAAC+AGG | + | chr8_1:52177176-52177195 | Msa1199860:intron | 35.0% | |
| CAACCTCTTGTGTAAAAACA+GGG | + | chr8_1:52177177-52177196 | Msa1199860:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8_1:52177183-52177202 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8_1:52177182-52177201 | Msa1199860:intron | 35.0% | |
| ! | GTTGCCCTTTTATTATTGCT+GGG | + | chr8_1:52177275-52177294 | Msa1199860:intron | 35.0% |
| CATGCCCAGCAATAATAAAA+GGG | - | chr8_1:52177282-52177301 | None:intergenic | 35.0% | |
| ATGTTTCTCCCTTACTTTCA+CGG | + | chr8_1:52177345-52177364 | Msa1199860:intron | 35.0% | |
| ! | GTTGCCCTTTTATTATTGCT+GGG | + | chr8_1:52177275-52177294 | Msa1199860:intron | 35.0% |
| CATGCCCAGCAATAATAAAA+GGG | - | chr8_1:52177282-52177301 | None:intergenic | 35.0% | |
| GGCATGGTCATTATGTTAAT+CGG | + | chr8_1:52177296-52177315 | Msa1199860:intron | 35.0% | |
| ! | TGAGAGATTGGTTGAAGAAA+AGG | + | chr8_1:52177538-52177557 | Msa1199860:CDS | 35.0% |
| ATTGGTTGAAGAAAAGGAAG+AGG | + | chr8_1:52177544-52177563 | Msa1199860:CDS | 35.0% | |
| AGACACCTTTCATTCTGTAT+AGG | - | chr8_1:52177571-52177590 | None:intergenic | 35.0% | |
| !! | ATACAGAATGAAAGGTGTCT+TGG | + | chr8_1:52177571-52177590 | Msa1199860:CDS | 35.0% |
| CTGAAACACATATCGTTGTT+CGG | - | chr8_1:52177609-52177628 | None:intergenic | 35.0% | |
| TGTGTTCATTGGAAGGAATT+TGG | + | chr8_1:52177809-52177828 | Msa1199860:CDS | 35.0% | |
| GGGATGATGATTGAACAGTT+TGG | - | chr8_1:52171383-52171402 | None:intergenic | 40.0% | |
| GAAATTGGAACGGAGTTGAA+GGG | - | chr8_1:52171403-52171422 | None:intergenic | 40.0% | |
| GTTCCAGCTACAATCATTAC+CGG | + | chr8_1:52171507-52171526 | Msa1199860:CDS | 40.0% | |
| AAACCGGTAATGATTGTAGC+TGG | - | chr8_1:52171513-52171532 | None:intergenic | 40.0% | |
| !! | GCTTAGCTAGGCTCTTATTT+TGG | + | chr8_1:52171936-52171955 | Msa1199860:intron | 40.0% |
| CATATTCTCACATCCCAACA+TGG | + | chr8_1:52172001-52172020 | Msa1199860:CDS | 40.0% | |
| ACACTCAATAACTGTGGGTT+AGG | + | chr8_1:52172068-52172087 | Msa1199860:intron | 40.0% | |
| AAGGGAATCATTTGAGTGCA+TGG | + | chr8_1:52172336-52172355 | Msa1199860:intron | 40.0% | |
| TCTGGCTGTTGTATGTAGTT+TGG | + | chr8_1:52172415-52172434 | Msa1199860:intron | 40.0% | |
| ! | CTGTTGTATGTAGTTTGGTG+AGG | + | chr8_1:52172420-52172439 | Msa1199860:intron | 40.0% |
| ! | GGTTGATATTGATGGATCAC+TGG | + | chr8_1:52172441-52172460 | Msa1199860:CDS | 40.0% |
| GCTAGTCATTCTTCTGTGAA+TGG | + | chr8_1:52172466-52172485 | Msa1199860:CDS | 40.0% | |
| ! | AAATGCTGTTGGAGTTGGTT+AGG | + | chr8_1:52172551-52172570 | Msa1199860:CDS | 40.0% |
| ! | TTTTGTGCTTTGTGTACTGG+GGG | + | chr8_1:52172646-52172665 | Msa1199860:intron | 40.0% |
| ! | TTGTTTGGGACTTCGATCAT+AGG | + | chr8_1:52172758-52172777 | Msa1199860:intron | 40.0% |
| AAAGTTTCAATAACAGGGGC+TGG | - | chr8_1:52173103-52173122 | None:intergenic | 40.0% | |
| TGCCATGCAACATTTGAATG+AGG | + | chr8_1:52173192-52173211 | Msa1199860:CDS | 40.0% | |
| CACCTCATTCAAATGTTGCA+TGG | - | chr8_1:52173197-52173216 | None:intergenic | 40.0% | |
| TGAGGTGAAACCAAGATTTG+TGG | + | chr8_1:52173210-52173229 | Msa1199860:CDS | 40.0% | |
| ACCAAGATTTGTGGTCAATG+AGG | + | chr8_1:52173219-52173238 | Msa1199860:CDS | 40.0% | |
| ! | TTTTGAACAAGGCAAGCTTC+TGG | + | chr8_1:52173275-52173294 | Msa1199860:intron | 40.0% |
| AGGTGTGTTTCAGTTACTTG+TGG | + | chr8_1:52173455-52173474 | Msa1199860:intron | 40.0% | |
| ! | GTTTAAATGGTGGAATGGCA+TGG | + | chr8_1:52173806-52173825 | Msa1199860:intron | 40.0% |
| GATGTGGGGGTTGTAAAAAT+CGG | - | chr8_1:52173832-52173851 | None:intergenic | 40.0% | |
| AACTTGAAAAAGGGATGTGG+GGG | - | chr8_1:52173845-52173864 | None:intergenic | 40.0% | |
| CAACTTGAAAAAGGGATGTG+GGG | - | chr8_1:52173846-52173865 | None:intergenic | 40.0% | |
| GCAACTTGAAAAAGGGATGT+GGG | - | chr8_1:52173847-52173866 | None:intergenic | 40.0% | |
| GCGATTGGCAACTTGAAAAA+GGG | - | chr8_1:52173854-52173873 | None:intergenic | 40.0% | |
| TGCGATTGGCAACTTGAAAA+AGG | - | chr8_1:52173855-52173874 | None:intergenic | 40.0% | |
| ACATGTGTATATTGGGGAGA+TGG | + | chr8_1:52174203-52174222 | Msa1199860:intron | 40.0% | |
| CATAGACTTTGTTCTTGGTG+TGG | + | chr8_1:52174426-52174445 | Msa1199860:CDS | 40.0% | |
| TGGGAGGATATGATATTCAG+AGG | + | chr8_1:52174446-52174465 | Msa1199860:CDS | 40.0% | |
| ATATTGCAGAATCGAAGCTG+AGG | + | chr8_1:52174593-52174612 | Msa1199860:intron | 40.0% | |
| AAGCATCTGGCATAATGCAA+TGG | - | chr8_1:52174834-52174853 | None:intergenic | 40.0% | |
| CATGATTTGAATCCTGGCAA+GGG | + | chr8_1:52175172-52175191 | Msa1199860:intron | 40.0% | |
| ! | TTTGTATTTTCTCCCTTGCC+AGG | - | chr8_1:52175187-52175206 | None:intergenic | 40.0% |
| GCATTCGTTTGTTCCCAAAT+TGG | - | chr8_1:52175485-52175504 | None:intergenic | 40.0% | |
| GAGTAGTTGCTTCTACTAGA+TGG | - | chr8_1:52175520-52175539 | None:intergenic | 40.0% | |
| GGCCTAATATCATTGCAGTT+TGG | - | chr8_1:52175591-52175610 | None:intergenic | 40.0% | |
| TGTGGTGCACCTTTCAATTA+AGG | - | chr8_1:52175637-52175656 | None:intergenic | 40.0% | |
| ! | CTTCGGACCCAATATCATTT+TGG | - | chr8_1:52175672-52175691 | None:intergenic | 40.0% |
| ACACCATCAAGTATGTGCTT+CGG | - | chr8_1:52175689-52175708 | None:intergenic | 40.0% | |
| ! | AGGACTGGTACACAAGTTAT+TGG | + | chr8_1:52175747-52175766 | Msa1199860:intron | 40.0% |
| GATAGTGAGTCCAGTAATCT+GGG | + | chr8_1:52175923-52175942 | Msa1199860:intron | 40.0% | |
| TCATGATTGATTGAGGACCA+AGG | - | chr8_1:52176648-52176667 | None:intergenic | 40.0% | |
| GTGTGGAATTCCTGTTAACT+TGG | - | chr8_1:52176674-52176693 | None:intergenic | 40.0% | |
| CAGGAATTCCACACTCTTAT+TGG | + | chr8_1:52176680-52176699 | Msa1199860:intron | 40.0% | |
| TGCATTTGCTTGTGGAATAC+AGG | + | chr8_1:52176757-52176776 | Msa1199860:intron | 40.0% | |
| !! | TTCTGGTGTCATAGAAACCA+AGG | + | chr8_1:52176862-52176881 | Msa1199860:intron | 40.0% |
| ATTGTTGTCATGTGACCGTA+AGG | + | chr8_1:52177132-52177151 | Msa1199860:intron | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | - | chr8_1:52177172-52177191 | None:intergenic | 40.0% |
| CGTACAATACACCAAATGGT+GGG | + | chr8_1:52177208-52177227 | Msa1199860:intron | 40.0% | |
| GCAATAATAAAAGGGCAACC+CGG | - | chr8_1:52177274-52177293 | None:intergenic | 40.0% | |
| ! | GGTTGCCCTTTTATTATTGC+TGG | + | chr8_1:52177274-52177293 | Msa1199860:intron | 40.0% |
| CCATGCCCAGCAATAATAAA+AGG | - | chr8_1:52177283-52177302 | None:intergenic | 40.0% | |
| ! | CCTTTTATTATTGCTGGGCA+TGG | + | chr8_1:52177280-52177299 | Msa1199860:intron | 40.0% |
| ! | GGTTGCCCTTTTATTATTGC+TGG | + | chr8_1:52177274-52177293 | Msa1199860:intron | 40.0% |
| CCATGCCCAGCAATAATAAA+AGG | - | chr8_1:52177283-52177302 | None:intergenic | 40.0% | |
| ! | CCTTTTATTATTGCTGGGCA+TGG | + | chr8_1:52177280-52177299 | Msa1199860:intron | 40.0% |
| TGGTGGTTAAGGTTGAAGAT+TGG | + | chr8_1:52177513-52177532 | Msa1199860:intron | 40.0% | |
| !! | TGAAGATTGGCTTGAGAGAT+TGG | + | chr8_1:52177526-52177545 | Msa1199860:CDS | 40.0% |
| GAGGACCTATACAGAATGAA+AGG | + | chr8_1:52177563-52177582 | Msa1199860:CDS | 40.0% | |
| CGAACAACGATATGTGTTTC+AGG | + | chr8_1:52177607-52177626 | Msa1199860:CDS | 40.0% | |
| GGAAATTGGAACGGAGTTGA+AGG | - | chr8_1:52171404-52171423 | None:intergenic | 45.0% | |
| GCTTGAGTCGAGTCAATAAC+AGG | - | chr8_1:52172223-52172242 | None:intergenic | 45.0% | |
| TGAACACAATACCTCGAGCA+GGG | - | chr8_1:52172271-52172290 | None:intergenic | 45.0% | |
| ATGAACACAATACCTCGAGC+AGG | - | chr8_1:52172272-52172291 | None:intergenic | 45.0% | |
| !! | GCTCGAGGTATTGTGTTCAT+TGG | + | chr8_1:52172272-52172291 | Msa1199860:intron | 45.0% |
| !! | GAGTGCATGGAGTGTTTTTG+AGG | + | chr8_1:52172349-52172368 | Msa1199860:intron | 45.0% |
| GCCTCATTGACCACAAATCT+TGG | - | chr8_1:52173223-52173242 | None:intergenic | 45.0% | |
| ! | TTTTGCAATCTGCGCTTCTC+TGG | - | chr8_1:52173708-52173727 | None:intergenic | 45.0% |
| !! | ATCTATGACTTGCTCCATGG+AGG | - | chr8_1:52173736-52173755 | None:intergenic | 45.0% |
| !! | AGCATCTATGACTTGCTCCA+TGG | - | chr8_1:52173739-52173758 | None:intergenic | 45.0% |
| AACAATGCTGCATACTTGGG+AGG | - | chr8_1:52173789-52173808 | None:intergenic | 45.0% | |
| GGCAACTTGAAAAAGGGATG+TGG | - | chr8_1:52173848-52173867 | None:intergenic | 45.0% | |
| GGCAGTCTTAGAATACGGAA+GGG | - | chr8_1:52173933-52173952 | None:intergenic | 45.0% | |
| AGGCAGTCTTAGAATACGGA+AGG | - | chr8_1:52173934-52173953 | None:intergenic | 45.0% | |
| TGCAGCAAATACAGACGGAA+AGG | - | chr8_1:52174542-52174561 | None:intergenic | 45.0% | |
| AGAATCGAAGCTGAGGTAGA+AGG | + | chr8_1:52174600-52174619 | Msa1199860:intron | 45.0% | |
| TACCATGTCCACAGTCATCT+GGG | - | chr8_1:52174650-52174669 | None:intergenic | 45.0% | |
| AGGAGCAGTAGAGAATGAAC+TGG | + | chr8_1:52174875-52174894 | Msa1199860:intron | 45.0% | |
| ACGGTCCATGATTTGAATCC+TGG | + | chr8_1:52175166-52175185 | Msa1199860:intron | 45.0% | |
| CCTTGCCAGGATTCAAATCA+TGG | - | chr8_1:52175174-52175193 | None:intergenic | 45.0% | |
| CCATGATTTGAATCCTGGCA+AGG | + | chr8_1:52175171-52175190 | Msa1199860:intron | 45.0% | |
| ACAACTGTGACAATGGTCTG+AGG | + | chr8_1:52175389-52175408 | Msa1199860:intron | 45.0% | |
| !!! | TCATTTTCTGGAGTGAGCAC+AGG | - | chr8_1:52175612-52175631 | None:intergenic | 45.0% |
| TGTGCTCACTCCAGAAAATG+AGG | + | chr8_1:52175611-52175630 | Msa1199860:intron | 45.0% | |
| !! | CAGAGAAAAGGTGTTAGGAC+TGG | + | chr8_1:52175732-52175751 | Msa1199860:intron | 45.0% |
| AGACTAAGGGCCCAAAGATA+TGG | + | chr8_1:52175786-52175805 | Msa1199860:intron | 45.0% | |
| TAAGGGCCCAAAGATATGGA+GGG | + | chr8_1:52175790-52175809 | Msa1199860:intron | 45.0% | |
| TATGGAGGGTTTATACTCGC+AGG | + | chr8_1:52175804-52175823 | Msa1199860:intron | 45.0% | |
| ATGGAGGGTTTATACTCGCA+GGG | + | chr8_1:52175805-52175824 | Msa1199860:intron | 45.0% | |
| GGATAGTGAGTCCAGTAATC+TGG | + | chr8_1:52175922-52175941 | Msa1199860:intron | 45.0% | |
| TTCCATGAGACCCAGATTAC+TGG | - | chr8_1:52175936-52175955 | None:intergenic | 45.0% | |
| ! | ATAGAGAGCACACACTCTGT+AGG | + | chr8_1:52175975-52175994 | Msa1199860:intron | 45.0% |
| ! | TAGAGAGCACACACTCTGTA+GGG | + | chr8_1:52175976-52175995 | Msa1199860:intron | 45.0% |
| CTCCGAAAGATTGAGCTGTT+AGG | - | chr8_1:52176131-52176150 | None:intergenic | 45.0% | |
| CTAACAGCTCAATCTTTCGG+AGG | + | chr8_1:52176129-52176148 | Msa1199860:intron | 45.0% | |
| CTCTAGTGTCAGCATTGTTG+CGG | + | chr8_1:52176376-52176395 | Msa1199860:CDS | 45.0% | |
| !! | TGGTGCTATGCATTTGCTTG+TGG | + | chr8_1:52176749-52176768 | Msa1199860:intron | 45.0% |
| ! | AATGCAAATGCGTGTCGTTC+TGG | + | chr8_1:52176845-52176864 | Msa1199860:intron | 45.0% |
| ATCATTAACCTTGGCGCAAC+TGG | + | chr8_1:52177105-52177124 | Msa1199860:intron | 45.0% | |
| ! | CAATTTTACCAGTTGCGCCA+AGG | - | chr8_1:52177116-52177135 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr8_1:52177204-52177223 | Msa1199860:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8_1:52177207-52177226 | Msa1199860:intron | 45.0% | |
| TTTCTCCCTTACTTTCACGG+TGG | + | chr8_1:52177348-52177367 | Msa1199860:intron | 45.0% | |
| TTCTCCCTTACTTTCACGGT+GGG | + | chr8_1:52177349-52177368 | Msa1199860:intron | 45.0% | |
| !! | AATGAAAGGTGTCTTGGCAG+TGG | + | chr8_1:52177577-52177596 | Msa1199860:CDS | 45.0% |
| ATGACAGCCCAGGAAAAACA+TGG | + | chr8_1:52177757-52177776 | Msa1199860:CDS | 45.0% | |
| ! | TGGGTTGCCATGTTTTTCCT+GGG | - | chr8_1:52177767-52177786 | None:intergenic | 45.0% |
| !! | TTGGGTTGCCATGTTTTTCC+TGG | - | chr8_1:52177768-52177787 | None:intergenic | 45.0% |
| GATGAAACTGCCCTCAGAAA+AGG | + | chr8_1:52177831-52177850 | Msa1199860:CDS | 45.0% | |
| !!! | GCCTTTGAAGCCTTTTCTGA+GGG | - | chr8_1:52177844-52177863 | None:intergenic | 45.0% |
| !!! | AGCCTTTGAAGCCTTTTCTG+AGG | - | chr8_1:52177845-52177864 | None:intergenic | 45.0% |
| AACAGAAGCTTCTTCGGCGT+GGG | - | chr8_1:52171478-52171497 | None:intergenic | 50.0% | |
| !!! | ATTACCGGTTTTCTCGGCTC+CGG | + | chr8_1:52171522-52171541 | Msa1199860:CDS | 50.0% |
| TCACATCCCAACATGGCAAG+CGG | + | chr8_1:52172008-52172027 | Msa1199860:CDS | 50.0% | |
| AGCTATCCGCTTGCCATGTT+GGG | - | chr8_1:52172017-52172036 | None:intergenic | 50.0% | |
| TGTGTATGATACCCTGCTCG+AGG | + | chr8_1:52172257-52172276 | Msa1199860:intron | 50.0% | |
| !! | CTTTAGGGAGTGTCCCTTCA+TGG | + | chr8_1:52172924-52172943 | Msa1199860:intron | 50.0% |
| ! | GACTTTGTTCTTGGTGTGGG+AGG | + | chr8_1:52174430-52174449 | Msa1199860:CDS | 50.0% |
| GTACCATGTCCACAGTCATC+TGG | - | chr8_1:52174651-52174670 | None:intergenic | 50.0% | |
| ! | TAGCTCACTGGGTTGAGCTA+AGG | + | chr8_1:52175138-52175157 | Msa1199860:intron | 50.0% |
| ! | AGCTCACTGGGTTGAGCTAA+GGG | + | chr8_1:52175139-52175158 | Msa1199860:intron | 50.0% |
| GGGTTGAGCTAAGGGGTTAA+CGG | + | chr8_1:52175147-52175166 | Msa1199860:intron | 50.0% | |
| ! | CTTGATTCTTTGGGAGCGAG+TGG | - | chr8_1:52175458-52175477 | None:intergenic | 50.0% |
| GGTCCGAAGCACATACTTGA+TGG | + | chr8_1:52175683-52175702 | Msa1199860:intron | 50.0% | |
| CTAAGGGCCCAAAGATATGG+AGG | + | chr8_1:52175789-52175808 | Msa1199860:intron | 50.0% | |
| GCAGGGCAAAGTCAGCTAAA+GGG | + | chr8_1:52175822-52175841 | Msa1199860:intron | 50.0% | |
| CAGGGCAAAGTCAGCTAAAG+GGG | + | chr8_1:52175823-52175842 | Msa1199860:intron | 50.0% | |
| ! | AGTGATAGTGTCACCTGAGC+TGG | + | chr8_1:52175846-52175865 | Msa1199860:intron | 50.0% |
| GTCCAGTAATCTGGGTCTCA+TGG | + | chr8_1:52175931-52175950 | Msa1199860:intron | 50.0% | |
| ! | AGAGAGCACACACTCTGTAG+GGG | + | chr8_1:52175977-52175996 | Msa1199860:intron | 50.0% |
| ! | GTATTGCTACTGACTGCCAC+AGG | - | chr8_1:52176009-52176028 | None:intergenic | 50.0% |
| TAGTGTCAGCATTGTTGCGG+AGG | + | chr8_1:52176379-52176398 | Msa1199860:CDS | 50.0% | |
| AGTGTCAGCATTGTTGCGGA+GGG | + | chr8_1:52176380-52176399 | Msa1199860:CDS | 50.0% | |
| GGGAACTCTTGATCGTGATG+AGG | + | chr8_1:52176400-52176419 | Msa1199860:CDS | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | + | chr8_1:52177138-52177157 | Msa1199860:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | + | chr8_1:52177139-52177158 | Msa1199860:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr8_1:52177150-52177169 | None:intergenic | 50.0% | |
| !! | AAAGGTGTCTTGGCAGTGGA+TGG | + | chr8_1:52177581-52177600 | Msa1199860:CDS | 50.0% |
| GCCCTCAGAAAAGGCTTCAA+AGG | + | chr8_1:52177840-52177859 | Msa1199860:CDS | 50.0% | |
| CAACAGAAGCTTCTTCGGCG+TGG | - | chr8_1:52171479-52171498 | None:intergenic | 55.0% | |
| CTTTCCGGAGCCGAGAAAAC+CGG | - | chr8_1:52171529-52171548 | None:intergenic | 55.0% | |
| CAGCTATCCGCTTGCCATGT+TGG | - | chr8_1:52172018-52172037 | None:intergenic | 55.0% | |
| !! | TCTGGGTGGCTTGCTGTAGA+GGG | - | chr8_1:52174633-52174652 | None:intergenic | 55.0% |
| !! | ATCTGGGTGGCTTGCTGTAG+AGG | - | chr8_1:52174634-52174653 | None:intergenic | 55.0% |
| CATGTCCACAGTCATCTGGG+TGG | - | chr8_1:52174647-52174666 | None:intergenic | 55.0% | |
| CACCCAGATGACTGTGGACA+TGG | + | chr8_1:52174645-52174664 | Msa1199860:CDS | 55.0% | |
| ! | GCTCACTGGGTTGAGCTAAG+GGG | + | chr8_1:52175140-52175159 | Msa1199860:intron | 55.0% |
| ! | GATTCTTTGGGAGCGAGTGG+TGG | - | chr8_1:52175455-52175474 | None:intergenic | 55.0% |
| CGCAGGGCAAAGTCAGCTAA+AGG | + | chr8_1:52175821-52175840 | Msa1199860:intron | 55.0% | |
| TCTGTAGGGGCTGAATCCTG+TGG | + | chr8_1:52175990-52176009 | Msa1199860:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8_1:52177151-52177170 | Msa1199860:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr8_1:52177247-52177266 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr8_1:52177248-52177267 | None:intergenic | 55.0% | |
| GGGTCCCACCGTGAAAGTAA+GGG | - | chr8_1:52177356-52177375 | None:intergenic | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr8_1:52177247-52177266 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr8_1:52177248-52177267 | None:intergenic | 55.0% | |
| ! | TCAGGGGGTGCATTCCATGT+TGG | + | chr8_1:52177734-52177753 | Msa1199860:intron | 55.0% |
| TCCATGTTGGATGACAGCCC+AGG | + | chr8_1:52177747-52177766 | Msa1199860:CDS | 55.0% | |
| TCCTGGGCTGTCATCCAACA+TGG | - | chr8_1:52177751-52177770 | None:intergenic | 55.0% | |
| GAAGCTTCTTCGGCGTGGGT+TGG | - | chr8_1:52171474-52171493 | None:intergenic | 60.0% | |
| ! | CGGTTTTCTCGGCTCCGGAA+AGG | + | chr8_1:52171527-52171546 | Msa1199860:CDS | 60.0% |
| TGCCTATGCTGCACTGTGCG+AGG | + | chr8_1:52172517-52172536 | Msa1199860:CDS | 60.0% | |
| CTCCTCGCACAGTGCAGCAT+AGG | - | chr8_1:52172522-52172541 | None:intergenic | 60.0% | |
| GCAAGCCACCCAGATGACTG+TGG | + | chr8_1:52174639-52174658 | Msa1199860:CDS | 60.0% | |
| AAGGGAGGACGGTAGCTCAC+TGG | + | chr8_1:52175126-52175145 | Msa1199860:intron | 60.0% | |
| AGGGAGGACGGTAGCTCACT+GGG | + | chr8_1:52175127-52175146 | Msa1199860:intron | 60.0% | |
| TCACCTGAGCTGGCTGCTTC+TGG | + | chr8_1:52175856-52175875 | Msa1199860:intron | 60.0% | |
| CTTCCAGAAGCAGCCAGCTC+AGG | - | chr8_1:52175862-52175881 | None:intergenic | 60.0% | |
| CTGAGCTGGCTGCTTCTGGA+AGG | + | chr8_1:52175860-52175879 | Msa1199860:intron | 60.0% | |
| ! | AGCTGGCTGCTTCTGGAAGG+AGG | + | chr8_1:52175863-52175882 | Msa1199860:intron | 60.0% |
| ! | GCTGGCTGCTTCTGGAAGGA+GGG | + | chr8_1:52175864-52175883 | Msa1199860:intron | 60.0% |
| ! | CTGGCTGCTTCTGGAAGGAG+GGG | + | chr8_1:52175865-52175884 | Msa1199860:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8_1:52177220-52177239 | Msa1199860:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr8_1:52177235-52177254 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr8_1:52177236-52177255 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8_1:52177235-52177254 | Msa1199860:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8_1:52177236-52177255 | Msa1199860:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr8_1:52177252-52177271 | Msa1199860:intron | 60.0% | |
| GGGGTCCCACCGTGAAAGTA+AGG | - | chr8_1:52177357-52177376 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr8_1:52177235-52177254 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr8_1:52177236-52177255 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8_1:52177235-52177254 | Msa1199860:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8_1:52177236-52177255 | Msa1199860:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+TGG | + | chr8_1:52177252-52177271 | Msa1199860:intron | 60.0% | |
| TGCGGGAGCTTCAGTGCACT+GGG | + | chr8_1:52177394-52177413 | Msa1199860:intron | 60.0% | |
| !! | TTCGGCGTGGGTTGGAGCAG+AGG | - | chr8_1:52171466-52171485 | None:intergenic | 65.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8_1:52177222-52177241 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr8_1:52177237-52177256 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8_1:52177241-52177260 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8_1:52177242-52177261 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr8_1:52177253-52177272 | Msa1199860:intron | 65.0% | |
| TTCACGGTGGGACCCCTTCC+CGG | + | chr8_1:52177361-52177380 | Msa1199860:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr8_1:52177237-52177256 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8_1:52177241-52177260 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8_1:52177242-52177261 | None:intergenic | 65.0% | |
| CGGGCGGTGACTGTGGGTGT+GGG | - | chr8_1:52177905-52177924 | None:intergenic | 70.0% | |
| TCGGGCGGTGACTGTGGGTG+TGG | - | chr8_1:52177906-52177925 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 52171336 | 52177927 | 52171336 | ID=Msa1199860;Name=Msa1199860 |
| chr8_1 | mRNA | 52171336 | 52177927 | 52171336 | ID=Msa1199860-mRNA-1;Parent=Msa1199860;Name=Msa1199860-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.3|0.18|0.90|1|1|11|52|422 |
| chr8_1 | exon | 52171336 | 52171548 | 52171336 | ID=Msa1199860-mRNA-1:exon:16598;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52171986 | 52172051 | 52171986 | ID=Msa1199860-mRNA-1:exon:16599;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52172433 | 52172616 | 52172433 | ID=Msa1199860-mRNA-1:exon:16600;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52173089 | 52173285 | 52173089 | ID=Msa1199860-mRNA-1:exon:16601;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52173406 | 52173456 | 52173406 | ID=Msa1199860-mRNA-1:exon:16602;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52174053 | 52174121 | 52174053 | ID=Msa1199860-mRNA-1:exon:16603;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52174376 | 52174467 | 52174376 | ID=Msa1199860-mRNA-1:exon:16604;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52174602 | 52174666 | 52174602 | ID=Msa1199860-mRNA-1:exon:16605;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52176333 | 52176421 | 52176333 | ID=Msa1199860-mRNA-1:exon:16606;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52177524 | 52177628 | 52177524 | ID=Msa1199860-mRNA-1:exon:16607;Parent=Msa1199860-mRNA-1 |
| chr8_1 | exon | 52177738 | 52177927 | 52177738 | ID=Msa1199860-mRNA-1:exon:16608;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52171336 | 52171548 | 52171336 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52171986 | 52172051 | 52171986 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52172433 | 52172616 | 52172433 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52173089 | 52173285 | 52173089 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52173406 | 52173456 | 52173406 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52174053 | 52174121 | 52174053 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52174376 | 52174467 | 52174376 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52174602 | 52174666 | 52174602 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52176333 | 52176421 | 52176333 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52177524 | 52177628 | 52177524 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | CDS | 52177738 | 52177875 | 52177738 | ID=Msa1199860-mRNA-1:cds;Parent=Msa1199860-mRNA-1 |
| chr8_1 | three_prime_UTR | 52177876 | 52177927 | 52177876 | ID=Msa1199860-mRNA-1:three_prime_utr;Parent=Msa1199860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
