Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279110 | XP_013446278.1 | 80.046 | 431 | 19 | 6 | 1 | 388 | 1 | 407 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279110 | sp|Q9BRT8|CBWD1_HUMAN | 33.511 | 376 | 189 | 9 | 42 | 383 | 25 | 373 | 5.70e-57 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279110 | A0A072U3B1 | 80.046 | 431 | 19 | 6 | 1 | 388 | 1 | 407 | 0.0 | 642 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0713070 | Msa1279110 | 0.927568 | 9.796527e-92 | -8.615850e-47 |
| Msa1252800 | Msa1279110 | 0.906294 | 1.730271e-80 | -8.615850e-47 |
| Msa1199860 | Msa1279110 | 0.831400 | 1.705901e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279110 | MtrunA17_Chr8g0369371 | 91.667 | 228 | 11 | 3 | 1 | 221 | 1 | 227 | 1.77e-147 | 417 |
| Msa1279110 | MtrunA17_Chr1g0212851 | 50.258 | 388 | 114 | 4 | 56 | 388 | 86 | 449 | 1.48e-114 | 341 |
| Msa1279110 | MtrunA17_Chr8g0369381 | 76.730 | 159 | 1 | 2 | 266 | 388 | 1 | 159 | 6.99e-78 | 237 |
| Msa1279110 | MtrunA17_Chr5g0418911 | 32.891 | 377 | 175 | 7 | 51 | 385 | 22 | 362 | 1.90e-53 | 181 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279110 | AT1G80480.1 | 50.360 | 417 | 122 | 7 | 33 | 388 | 52 | 444 | 1.02e-118 | 352 |
| Msa1279110 | AT1G15730.1 | 45.786 | 439 | 146 | 6 | 18 | 388 | 34 | 448 | 3.13e-114 | 340 |
| Msa1279110 | AT1G26520.1 | 33.239 | 355 | 186 | 7 | 59 | 386 | 42 | 372 | 2.53e-53 | 181 |
Find 89 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTTCTTATTATGGAAAT+TGG | 0.158974 | 8_3:+15888464 | None:intergenic |
| CAAATTAAGCAAGCTAAATT+TGG | 0.169496 | 8_3:-15885391 | Msa1279110:CDS |
| CATAATAAGAACTTCTATTA+TGG | 0.204148 | 8_3:-15888456 | Msa1279110:CDS |
| ACTTCTATTATGGAAGTTTC+AGG | 0.219627 | 8_3:-15888446 | Msa1279110:CDS |
| CATAATAGAAGTTCTTATTA+TGG | 0.232184 | 8_3:+15888457 | None:intergenic |
| AAAATAAAGTAGCACCTTTC+CGG | 0.251113 | 8_3:+15888335 | None:intergenic |
| GTATAATAGTTCTGTTGTTT+TGG | 0.291165 | 8_3:-15885718 | Msa1279110:CDS |
| GTTGACATAGACTTTGTTCT+TGG | 0.292756 | 8_3:-15885364 | Msa1279110:CDS |
| TGTGTTCATTGGAAGGAATT+TGG | 0.308159 | 8_3:-15881971 | Msa1279110:CDS |
| ATAAATAAGCTTGTGTTCAT+TGG | 0.323343 | 8_3:-15881982 | Msa1279110:CDS |
| GCCTCATTGACCACAAATCT+TGG | 0.344694 | 8_3:+15886565 | None:intergenic |
| GACATTATCATGGTCAATAA+TGG | 0.345998 | 8_3:-15887292 | Msa1279110:CDS |
| TTTGGTGAGGTTGATATTGA+TGG | 0.359152 | 8_3:-15887352 | Msa1279110:CDS |
| TTGCCTTGTTCAAAATAATT+CGG | 0.361312 | 8_3:+15886518 | None:intergenic |
| AGTTTCTGAGTATGTTAAAC+TGG | 0.363084 | 8_3:-15886647 | Msa1279110:CDS |
| ATGATTGAACAGTTTGGAAA+AGG | 0.370303 | 8_3:+15888505 | None:intergenic |
| AGCTATCCGCTTGCCATGTT+GGG | 0.375881 | 8_3:+15887750 | None:intergenic |
| TCGGGCGGTGACTGTGGGTG+TGG | 0.376839 | 8_3:+15881878 | None:intergenic |
| CAGAACTATTATACTCATAT+TGG | 0.376886 | 8_3:+15885727 | None:intergenic |
| GTACCATGTCCACAGTCATC+TGG | 0.405192 | 8_3:+15885137 | None:intergenic |
| AAATGCTGTTGGAGTTGGTT+AGG | 0.413967 | 8_3:-15887234 | Msa1279110:CDS |
| GATATTGACCAAGAAAATAA+AGG | 0.416680 | 8_3:-15886350 | Msa1279110:intron |
| GTTCCAGCTACAATCATTAC+CGG | 0.419776 | 8_3:-15888369 | Msa1279110:CDS |
| GATGAAACTGCCCTCAGAAA+AGG | 0.437172 | 8_3:-15881949 | Msa1279110:CDS |
| CTGAGTATGTTAAACTGGAT+GGG | 0.443361 | 8_3:-15886642 | Msa1279110:CDS |
| TGATTGAACAGTTTGGAAAA+GGG | 0.447164 | 8_3:+15888506 | None:intergenic |
| AGAATCGAAGCTGAGGTAGA+AGG | 0.449213 | 8_3:-15885185 | Msa1279110:CDS |
| TATACTTCGGGCGGTGACTG+TGG | 0.452949 | 8_3:+15881872 | None:intergenic |
| CAGCTATCCGCTTGCCATGT+TGG | 0.454491 | 8_3:+15887749 | None:intergenic |
| GGGATGATGATTGAACAGTT+TGG | 0.457942 | 8_3:+15888499 | None:intergenic |
| ATCTGGGTGGCTTGCTGTAG+AGG | 0.460046 | 8_3:+15885154 | None:intergenic |
| GGAAATTGGAACGGAGTTGA+AGG | 0.461297 | 8_3:+15888478 | None:intergenic |
| TAGTCTAGTATTTAAAATGC+AGG | 0.465423 | 8_3:-15881912 | Msa1279110:exon |
| GCTAGTCATTCTTCTGTGAA+TGG | 0.465790 | 8_3:-15887319 | Msa1279110:CDS |
| TCTGAGTATGTTAAACTGGA+TGG | 0.474114 | 8_3:-15886643 | Msa1279110:CDS |
| CACATTGTTATTGAAACGAC+AGG | 0.475915 | 8_3:-15887190 | Msa1279110:intron |
| AAAGTTTCAATAACAGGGGC+TGG | 0.476071 | 8_3:+15886685 | None:intergenic |
| AGTTAAAATGCTGTTGGAGT+TGG | 0.477006 | 8_3:-15887239 | Msa1279110:CDS |
| GACTTTGTTCTTGGTGTGGG+AGG | 0.487525 | 8_3:-15885355 | Msa1279110:CDS |
| CTTTCCGGAGCCGAGAAAAC+CGG | 0.492702 | 8_3:+15888350 | None:intergenic |
| CAACAGAAGCTTCTTCGCCA+TGG | 0.493301 | 8_3:+15888400 | None:intergenic |
| CACCTCATTCAAATGTTGCA+TGG | 0.496351 | 8_3:+15886591 | None:intergenic |
| ATAGACTTTGTTCTTGGTGT+GGG | 0.501973 | 8_3:-15885358 | Msa1279110:CDS |
| AAACCGGTAATGATTGTAGC+TGG | 0.501976 | 8_3:+15888366 | None:intergenic |
| CGGGCGGTGACTGTGGGTGT+GGG | 0.502952 | 8_3:+15881879 | None:intergenic |
| AATTGTTGTCAGCATATCAA+TGG | 0.505862 | 8_3:-15885421 | Msa1279110:intron |
| GCCCTCAGAAAAGGCTTCAA+AGG | 0.510234 | 8_3:-15881940 | Msa1279110:CDS |
| GCCATGGGTGGTTGGAGCAG+AGG | 0.518040 | 8_3:+15888416 | None:intergenic |
| TACCATGTCCACAGTCATCT+GGG | 0.525702 | 8_3:+15885138 | None:intergenic |
| TCCTCTGCTCCAACCACCCA+TGG | 0.528036 | 8_3:-15888417 | Msa1279110:CDS |
| GCTTCTTCGCCATGGGTGGT+TGG | 0.530949 | 8_3:+15888408 | None:intergenic |
| AACAGAAGCTTCTTCGCCAT+GGG | 0.534873 | 8_3:+15888401 | None:intergenic |
| ATAAGCTTGTGTTCATTGGA+AGG | 0.536881 | 8_3:-15881978 | Msa1279110:CDS |
| AGATCTAGTTAAAATGCTGT+TGG | 0.540723 | 8_3:-15887245 | Msa1279110:CDS |
| CATAGACTTTGTTCTTGGTG+TGG | 0.540782 | 8_3:-15885359 | Msa1279110:CDS |
| TCCTGGGCTGTCATCCAACA+TGG | 0.541582 | 8_3:+15882032 | None:intergenic |
| GGTTGATATTGATGGATCAC+TGG | 0.543342 | 8_3:-15887344 | Msa1279110:CDS |
| GATAGCTGTCATTGAAAATG+AGG | 0.545290 | 8_3:-15887734 | Msa1279110:intron |
| TCTGGGTGGCTTGCTGTAGA+GGG | 0.549262 | 8_3:+15885155 | None:intergenic |
| TGAGTATGTTAAACTGGATG+GGG | 0.549852 | 8_3:-15886641 | Msa1279110:CDS |
| CTCCTCGCACAGTGCAGCAT+AGG | 0.551587 | 8_3:+15887266 | None:intergenic |
| AGTCTAGTATTTAAAATGCA+GGG | 0.552617 | 8_3:-15881911 | Msa1279110:exon |
| ATACTTCGGGCGGTGACTGT+GGG | 0.555241 | 8_3:+15881873 | None:intergenic |
| TCTTATTATGGAAATTGGAA+CGG | 0.556311 | 8_3:+15888469 | None:intergenic |
| CACCCAGATGACTGTGGACA+TGG | 0.556680 | 8_3:-15885140 | Msa1279110:intron |
| TGCCTATGCTGCACTGTGCG+AGG | 0.562778 | 8_3:-15887268 | Msa1279110:CDS |
| CTCTAGTGTCAGCATTGTTG+CGG | 0.564690 | 8_3:-15883403 | Msa1279110:CDS |
| ATGTATCTACAGAACACAAA+GGG | 0.575635 | 8_3:-15883458 | Msa1279110:intron |
| GAAATTGGAACGGAGTTGAA+GGG | 0.576416 | 8_3:+15888479 | None:intergenic |
| TAGTGTCAGCATTGTTGCGG+AGG | 0.580263 | 8_3:-15883400 | Msa1279110:CDS |
| TTGTCAGCATATCAATGGAA+TGG | 0.580500 | 8_3:-15885416 | Msa1279110:intron |
| TCCATGTTGGATGACAGCCC+AGG | 0.585563 | 8_3:-15882033 | Msa1279110:CDS |
| AGAAGCTTCTTCGCCATGGG+TGG | 0.585864 | 8_3:+15888404 | None:intergenic |
| CTGTTGTATGTAGTTTGGTG+AGG | 0.586467 | 8_3:-15887365 | Msa1279110:intron |
| CATATTCTCACATCCCAACA+TGG | 0.594416 | 8_3:-15887763 | Msa1279110:CDS |
| TGGGAGGATATGATATTCAG+AGG | 0.595050 | 8_3:-15885339 | Msa1279110:intron |
| ACCAAGATTTGTGGTCAATG+AGG | 0.603516 | 8_3:-15886566 | Msa1279110:CDS |
| TGAGGTGAAACCAAGATTTG+TGG | 0.618768 | 8_3:-15886575 | Msa1279110:CDS |
| AGTGTCAGCATTGTTGCGGA+GGG | 0.630144 | 8_3:-15883399 | Msa1279110:CDS |
| GAATGGTGAAGACATTATCA+TGG | 0.630318 | 8_3:-15887302 | Msa1279110:CDS |
| TCACATCCCAACATGGCAAG+CGG | 0.641762 | 8_3:-15887756 | Msa1279110:CDS |
| TGCCATGCAACATTTGAATG+AGG | 0.646050 | 8_3:-15886593 | Msa1279110:CDS |
| CTTCTGAAGTATACTTCGGG+CGG | 0.647830 | 8_3:+15881863 | None:intergenic |
| GAGAATATGATTCAGAAGAG+TGG | 0.653863 | 8_3:+15887777 | None:intergenic |
| AATGTATCTACAGAACACAA+AGG | 0.658242 | 8_3:-15883459 | Msa1279110:intron |
| GGGAACTCTTGATCGTGATG+AGG | 0.670033 | 8_3:-15883379 | Msa1279110:intron |
| ATATTGCAGAATCGAAGCTG+AGG | 0.670166 | 8_3:-15885192 | Msa1279110:intron |
| GCAAGCCACCCAGATGACTG+TGG | 0.685211 | 8_3:-15885146 | Msa1279110:CDS |
| CATGTCCACAGTCATCTGGG+TGG | 0.712242 | 8_3:+15885141 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATTATTCAATGAAA+AGG | - | chr8_3:15883430-15883449 | Msa1279110:CDS | 10.0% |
| !! | AAAAAATTATTCAATGAAAA+GGG | - | chr8_3:15883431-15883450 | Msa1279110:CDS | 10.0% |
| !! | AACAAATCAAAATAATAATA+AGG | - | chr8_3:15885741-15885760 | Msa1279110:intron | 10.0% |
| !! | AATCAAATAAAATAAAACAT+AGG | + | chr8_3:15886793-15886812 | None:intergenic | 10.0% |
| !!! | TTTATTTTATTTGATTTCTT+TGG | - | chr8_3:15886797-15886816 | Msa1279110:intron | 10.0% |
| !!! | TGTTATTATTTCAAAATTTT+AGG | + | chr8_3:15886841-15886860 | None:intergenic | 10.0% |
| !! | AAAATATAAAAAAAATACTC+TGG | + | chr8_3:15886910-15886929 | None:intergenic | 10.0% |
| !! | TCAATATATAAATCAAAATA+GGG | + | chr8_3:15887256-15887275 | None:intergenic | 10.0% |
| !! | AAAATAACTTATACATAAGT+AGG | - | chr8_3:15882123-15882142 | Msa1279110:intron | 15.0% |
| !! | AACAAATCTAAATTAATTGA+TGG | + | chr8_3:15882338-15882357 | None:intergenic | 15.0% |
| !!! | ATCGAATGTTATATTTTTAT+TGG | - | chr8_3:15882529-15882548 | Msa1279110:intron | 15.0% |
| !!! | TATTCGATTGTTTTAAATAT+CGG | + | chr8_3:15883663-15883682 | None:intergenic | 15.0% |
| !!! | TTATTTTTCTTAATCTAACT+AGG | - | chr8_3:15884123-15884142 | Msa1279110:intron | 15.0% |
| !! | TGATATAATAAACAATATAC+AGG | + | chr8_3:15884908-15884927 | None:intergenic | 15.0% |
| !!! | AGATATTTCTTTTTAATTCA+TGG | - | chr8_3:15884975-15884994 | Msa1279110:intron | 15.0% |
| !!! | AAATAGAAATTTGTTGTTAA+CGG | - | chr8_3:15885393-15885412 | Msa1279110:CDS | 15.0% |
| !! | AAGTAGTTATGATTATTAAA+CGG | + | chr8_3:15885575-15885594 | None:intergenic | 15.0% |
| !! | AATATTAATCCCTATTTATA+GGG | - | chr8_3:15885692-15885711 | Msa1279110:CDS | 15.0% |
| !!! | TTTTGATTTGTTCTTAATTT+AGG | + | chr8_3:15885733-15885752 | None:intergenic | 15.0% |
| !! | AAATCAAAATAATAATAAGG+AGG | - | chr8_3:15885744-15885763 | Msa1279110:intron | 15.0% |
| !! | CTCAATATATAAATCAAAAT+AGG | + | chr8_3:15887257-15887276 | None:intergenic | 15.0% |
| !!! | ATATTTTATATCATTAACCT+TGG | - | chr8_3:15887736-15887755 | Msa1279110:CDS | 15.0% |
| !! | CATAATAGAAGTTCTTATTA+TGG | + | chr8_3:15881965-15881984 | None:intergenic | 20.0% |
| !! | CATAATAAGAACTTCTATTA+TGG | - | chr8_3:15881963-15881982 | Msa1279110:CDS | 20.0% |
| !! | CCTTAAGTTATAAACTATTA+GGG | + | chr8_3:15882199-15882218 | None:intergenic | 20.0% |
| !! | ACCTTAAGTTATAAACTATT+AGG | + | chr8_3:15882200-15882219 | None:intergenic | 20.0% |
| !! | CATGTAAATAAAATGATTAC+TGG | + | chr8_3:15882363-15882382 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAATATTCAAGAC+CGG | - | chr8_3:15882482-15882501 | Msa1279110:intron | 20.0% |
| !!! | TAGAACTTATAGAATTTTTC+CGG | + | chr8_3:15882504-15882523 | None:intergenic | 20.0% |
| !!! | AGGATGTGTTTTTAATAATA+TGG | - | chr8_3:15883003-15883022 | Msa1279110:intron | 20.0% |
| !!! | GGATGTGTTTTTAATAATAT+GGG | - | chr8_3:15883004-15883023 | Msa1279110:intron | 20.0% |
| !! | CAGTAATTTATGATATTATC+TGG | - | chr8_3:15883031-15883050 | Msa1279110:intron | 20.0% |
| !! | ATATTAGTAACTTCACAATT+TGG | + | chr8_3:15883355-15883374 | None:intergenic | 20.0% |
| !! | TGAAAAAAGTTTCAATAACA+GGG | + | chr8_3:15883742-15883761 | None:intergenic | 20.0% |
| !!! | TTTACATTGGTAGTAAAATT+CGG | + | chr8_3:15884538-15884557 | None:intergenic | 20.0% |
| !!! | ATCAAGGATTAATAGTTTTA+TGG | - | chr8_3:15884603-15884622 | Msa1279110:intron | 20.0% |
| !!! | GCATTATAATTCTTGTTTTT+TGG | - | chr8_3:15884727-15884746 | Msa1279110:intron | 20.0% |
| !! | TCTTCTTAAAATACTAAAGT+AGG | - | chr8_3:15885489-15885508 | Msa1279110:intron | 20.0% |
| !! | CAATATTAATCCCTATTTAT+AGG | - | chr8_3:15885691-15885710 | Msa1279110:CDS | 20.0% |
| !! | TTAAGTCAGTTGTAATAAAA+GGG | - | chr8_3:15886539-15886558 | Msa1279110:CDS | 20.0% |
| !! | GTATTATTGATGGAAAATAA+GGG | + | chr8_3:15886687-15886706 | None:intergenic | 20.0% |
| !! | AGTATTATTGATGGAAAATA+AGG | + | chr8_3:15886688-15886707 | None:intergenic | 20.0% |
| !!! | GCAATAATTTGTTTTTTTAG+AGG | - | chr8_3:15887068-15887087 | Msa1279110:intron | 20.0% |
| !!! | GTAAGACAATATTTTGTAAA+TGG | + | chr8_3:15887118-15887137 | None:intergenic | 20.0% |
| !!! | TTTCTAAATGGTTTTGTTAA+TGG | - | chr8_3:15887344-15887363 | Msa1279110:CDS | 20.0% |
| !! | ACAATGTGTAGTATAAATTA+TGG | - | chr8_3:15887369-15887388 | Msa1279110:intron | 20.0% |
| !!! | AAAGGTTTGAAATTACAAAT+AGG | + | chr8_3:15888309-15888328 | None:intergenic | 20.0% |
| !!! | TTATTTATCTTCTTTTCGTT+GGG | + | chr8_3:15888425-15888444 | None:intergenic | 20.0% |
| ! | TCTTATTATGGAAATTGGAA+CGG | + | chr8_3:15881953-15881972 | None:intergenic | 25.0% |
| ! | GAAGTTCTTATTATGGAAAT+TGG | + | chr8_3:15881958-15881977 | None:intergenic | 25.0% |
| !! | AAATTTTGTGTTTCCAAACA+AGG | - | chr8_3:15882173-15882192 | Msa1279110:intron | 25.0% |
| ! | CCCTAATAGTTTATAACTTA+AGG | - | chr8_3:15882196-15882215 | Msa1279110:intron | 25.0% |
| ! | TTGTTAGTTGCTGAAATAAA+AGG | + | chr8_3:15882765-15882784 | None:intergenic | 25.0% |
| !! | GCAACTAACAAATTTTGAAT+TGG | - | chr8_3:15882774-15882793 | Msa1279110:intron | 25.0% |
| ! | TATTGTGTTCATTGTAAACA+AGG | - | chr8_3:15882951-15882970 | Msa1279110:intron | 25.0% |
| ! | ATTGTGTTCATTGTAAACAA+GGG | - | chr8_3:15882952-15882971 | Msa1279110:intron | 25.0% |
| !! | TTAAGTTTTTGCAAAACACT+TGG | - | chr8_3:15883466-15883485 | Msa1279110:intron | 25.0% |
| ! | TGACCTTATCTAATTCTAAA+TGG | - | chr8_3:15883499-15883518 | Msa1279110:intron | 25.0% |
| !! | GAACCATTTAGAATTAGATA+AGG | + | chr8_3:15883505-15883524 | None:intergenic | 25.0% |
| !!! | TGTGTTGCTTAAAAATCTTT+AGG | - | chr8_3:15883542-15883561 | Msa1279110:intron | 25.0% |
| !!! | GTGTTGCTTAAAAATCTTTA+GGG | - | chr8_3:15883543-15883562 | Msa1279110:intron | 25.0% |
| !! | TCTCATGCATTTTTAAATGA+TGG | - | chr8_3:15883612-15883631 | Msa1279110:intron | 25.0% |
| ! | GAAAAAAGTTTCAATAACAG+GGG | + | chr8_3:15883741-15883760 | None:intergenic | 25.0% |
| ! | CTGAAAAAAGTTTCAATAAC+AGG | + | chr8_3:15883743-15883762 | None:intergenic | 25.0% |
| !! | TTGCCTTGTTCAAAATAATT+CGG | + | chr8_3:15883904-15883923 | None:intergenic | 25.0% |
| ! | GATATTGACCAAGAAAATAA+AGG | - | chr8_3:15884069-15884088 | Msa1279110:intron | 25.0% |
| !! | TTTTCTTAATCTAACTAGGA+AGG | - | chr8_3:15884127-15884146 | Msa1279110:intron | 25.0% |
| ! | GAAATGTACAAATATGAAAC+CGG | - | chr8_3:15884178-15884197 | Msa1279110:intron | 25.0% |
| ! | AAATGTACAAATATGAAACC+GGG | - | chr8_3:15884179-15884198 | Msa1279110:intron | 25.0% |
| !! | TAACTGATATGGAGTTATTT+TGG | + | chr8_3:15884286-15884305 | None:intergenic | 25.0% |
| ! | GTAAAATTTAATGATGCGAT+TGG | + | chr8_3:15884503-15884522 | None:intergenic | 25.0% |
| !!! | ATTCCAAAACTTTGTTTTCA+CGG | - | chr8_3:15884638-15884657 | Msa1279110:intron | 25.0% |
| ! | CAGAACTATTATACTCATAT+TGG | + | chr8_3:15884695-15884714 | None:intergenic | 25.0% |
| !!! | GTATAATAGTTCTGTTGTTT+TGG | - | chr8_3:15884701-15884720 | Msa1279110:intron | 25.0% |
| ! | TGTATGTACATGTGTATATT+GGG | - | chr8_3:15884830-15884849 | Msa1279110:intron | 25.0% |
| ! | ATCTTTAAGCATGATTTCTA+GGG | + | chr8_3:15884959-15884978 | None:intergenic | 25.0% |
| ! | TATCTTTAAGCATGATTTCT+AGG | + | chr8_3:15884960-15884979 | None:intergenic | 25.0% |
| ! | CAAATTAAGCAAGCTAAATT+TGG | - | chr8_3:15885028-15885047 | Msa1279110:intron | 25.0% |
| ! | TAATTAAGAAAGTGACAACA+AGG | + | chr8_3:15885318-15885337 | None:intergenic | 25.0% |
| ! | TACAAGACTAGATTTCTATA+TGG | + | chr8_3:15885542-15885561 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGTGAGATTTA+AGG | - | chr8_3:15885594-15885613 | Msa1279110:intron | 25.0% |
| !! | TTTGTGAGATTTAAGGTAAA+AGG | - | chr8_3:15885601-15885620 | Msa1279110:intron | 25.0% |
| ! | CAAAATAATAATAAGGAGGA+CGG | - | chr8_3:15885748-15885767 | Msa1279110:intron | 25.0% |
| ! | ACCAAAAACCAAAATGATAT+TGG | - | chr8_3:15886299-15886318 | Msa1279110:intron | 25.0% |
| ! | CCAAAAACCAAAATGATATT+GGG | - | chr8_3:15886300-15886319 | Msa1279110:intron | 25.0% |
| ! | GTTAAGTCAGTTGTAATAAA+AGG | - | chr8_3:15886538-15886557 | Msa1279110:CDS | 25.0% |
| ! | TCTCTATTCTAACAAACTTA+GGG | + | chr8_3:15886600-15886619 | None:intergenic | 25.0% |
| ! | TATAGTTGTGTTTGAATCTT+TGG | - | chr8_3:15886741-15886760 | Msa1279110:intron | 25.0% |
| !! | TATTTTGTAAATGGTCAGAA+GGG | + | chr8_3:15887109-15887128 | None:intergenic | 25.0% |
| !! | ATATTTTGTAAATGGTCAGA+AGG | + | chr8_3:15887110-15887129 | None:intergenic | 25.0% |
| !! | AAATCAAAATAGGGTTGATT+AGG | + | chr8_3:15887247-15887266 | None:intergenic | 25.0% |
| ! | TATATTGAGAAACTAATCCT+TGG | - | chr8_3:15887268-15887287 | Msa1279110:CDS | 25.0% |
| ! | ACTCTTATTGGATTTCTAAA+TGG | - | chr8_3:15887332-15887351 | Msa1279110:CDS | 25.0% |
| ! | TCAAACAAGATGACTTTATT+GGG | + | chr8_3:15887580-15887599 | None:intergenic | 25.0% |
| ! | AATATGTATGTTGTATGAGT+AGG | - | chr8_3:15887701-15887720 | Msa1279110:intron | 25.0% |
| !!! | GTTAATCAGTGATTTTTTTC+TGG | - | chr8_3:15887950-15887969 | Msa1279110:intron | 25.0% |
| ! | ACCATTTAATGTGAAAGTAA+GGG | + | chr8_3:15888137-15888156 | None:intergenic | 25.0% |
| ! | ATTACAAATAGGCAATAGAA+TGG | + | chr8_3:15888298-15888317 | None:intergenic | 25.0% |
| ! | CCTGAAAGTAGTAATAAATA+GGG | + | chr8_3:15888358-15888377 | None:intergenic | 25.0% |
| ! | CCTATTTATTACTACTTTCA+GGG | - | chr8_3:15888356-15888375 | Msa1279110:CDS | 25.0% |
| ! | CTATTTATTACTACTTTCAG+GGG | - | chr8_3:15888357-15888376 | Msa1279110:CDS | 25.0% |
| ! | TATTTATTACTACTTTCAGG+GGG | - | chr8_3:15888358-15888377 | Msa1279110:CDS | 25.0% |
| !! | CTTATTTATCTTCTTTTCGT+TGG | + | chr8_3:15888426-15888445 | None:intergenic | 25.0% |
| ! | ATAAATAAGCTTGTGTTCAT+TGG | - | chr8_3:15888437-15888456 | Msa1279110:CDS | 25.0% |
| !! | TAGTCTAGTATTTAAAATGC+AGG | - | chr8_3:15888507-15888526 | Msa1279110:CDS | 25.0% |
| !! | AGTCTAGTATTTAAAATGCA+GGG | - | chr8_3:15888508-15888527 | Msa1279110:CDS | 25.0% |
| TGATTGAACAGTTTGGAAAA+GGG | + | chr8_3:15881916-15881935 | None:intergenic | 30.0% | |
| ATGATTGAACAGTTTGGAAA+AGG | + | chr8_3:15881917-15881936 | None:intergenic | 30.0% | |
| ACTTCTATTATGGAAGTTTC+AGG | - | chr8_3:15881973-15881992 | Msa1279110:CDS | 30.0% | |
| AAAATAAAGTAGCACCTTTC+CGG | + | chr8_3:15882087-15882106 | None:intergenic | 30.0% | |
| AACACAACTTCTATGATTGA+TGG | - | chr8_3:15882246-15882265 | Msa1279110:intron | 30.0% | |
| ! | TTACATGCAACAAGTTCTAA+TGG | - | chr8_3:15882376-15882395 | Msa1279110:intron | 30.0% |
| AACCTATGAAAACAAACCAT+CGG | - | chr8_3:15882858-15882877 | Msa1279110:intron | 30.0% | |
| GACATTATCATGGTCAATAA+TGG | - | chr8_3:15883127-15883146 | Msa1279110:intron | 30.0% | |
| AGATCTAGTTAAAATGCTGT+TGG | - | chr8_3:15883174-15883193 | Msa1279110:intron | 30.0% | |
| CTAAAGCTTCCAAAAAAAGT+TGG | + | chr8_3:15883588-15883607 | None:intergenic | 30.0% | |
| ! | TACATTCTTAACTGTTTTGC+AGG | - | chr8_3:15883701-15883720 | Msa1279110:intron | 30.0% |
| AGTTTCTGAGTATGTTAAAC+TGG | - | chr8_3:15883772-15883791 | Msa1279110:intron | 30.0% | |
| !!! | TGACCGAATTATTTTGAACA+AGG | - | chr8_3:15883898-15883917 | Msa1279110:intron | 30.0% |
| ! | CTTTAACTTTGTTTCTCTTG+TGG | - | chr8_3:15883962-15883981 | Msa1279110:intron | 30.0% |
| !!! | GAAACACACCTTTATTTTCT+TGG | + | chr8_3:15884080-15884099 | None:intergenic | 30.0% |
| !!! | ATATGGAGTTATTTTGGTCA+TGG | + | chr8_3:15884280-15884299 | None:intergenic | 30.0% |
| TACTCAGGAAATAACTGATA+TGG | + | chr8_3:15884297-15884316 | None:intergenic | 30.0% | |
| TTAAACAATGCTGCATACTT+GGG | + | chr8_3:15884426-15884445 | None:intergenic | 30.0% | |
| TTTAAACAATGCTGCATACT+TGG | + | chr8_3:15884427-15884446 | None:intergenic | 30.0% | |
| AGTATGCAGCATTGTTTAAA+TGG | - | chr8_3:15884427-15884446 | Msa1279110:intron | 30.0% | |
| !!! | GGAAGGGTTTTTTTTTACAT+TGG | + | chr8_3:15884551-15884570 | None:intergenic | 30.0% |
| TTGATCATTGACCAATTGAA+AGG | + | chr8_3:15884588-15884607 | None:intergenic | 30.0% | |
| TTTCAATTGGTCAATGATCA+AGG | - | chr8_3:15884587-15884606 | Msa1279110:intron | 30.0% | |
| !!! | AATTCTTGTTTTTTGGCAGA+AGG | - | chr8_3:15884734-15884753 | Msa1279110:intron | 30.0% |
| CTGTATGTACATGTGTATAT+TGG | - | chr8_3:15884829-15884848 | Msa1279110:intron | 30.0% | |
| GTATGTACATGTGTATATTG+GGG | - | chr8_3:15884831-15884850 | Msa1279110:intron | 30.0% | |
| AATTGTTGTCAGCATATCAA+TGG | - | chr8_3:15884998-15885017 | Msa1279110:intron | 30.0% | |
| ATATGATATTCAGAGGTAAG+AGG | - | chr8_3:15885087-15885106 | Msa1279110:intron | 30.0% | |
| !!! | ATTTTAAGAAGAGAAGCATC+TGG | + | chr8_3:15885481-15885500 | None:intergenic | 30.0% |
| TCTGTGTATCCCTATAAATA+GGG | + | chr8_3:15885704-15885723 | None:intergenic | 30.0% | |
| !! | AGCTTGTTATAAATATACCC+TGG | - | chr8_3:15885989-15886008 | Msa1279110:intron | 30.0% |
| ! | GTTACGTTTTATCTTTTCCA+GGG | + | chr8_3:15886009-15886028 | None:intergenic | 30.0% |
| ! | TGTTACGTTTTATCTTTTCC+AGG | + | chr8_3:15886010-15886029 | None:intergenic | 30.0% |
| AAGCTTAATCACTTAACAGA+AGG | - | chr8_3:15886179-15886198 | Msa1279110:intron | 30.0% | |
| AACCAAACTGCAATGATATT+AGG | - | chr8_3:15886224-15886243 | Msa1279110:intron | 30.0% | |
| AAAATGAGGCCTTAATTGAA+AGG | - | chr8_3:15886263-15886282 | Msa1279110:intron | 30.0% | |
| !!! | TTTTGGTTTTTGGTTTGATG+TGG | + | chr8_3:15886293-15886312 | None:intergenic | 30.0% |
| !!! | CCCAATATCATTTTGGTTTT+TGG | + | chr8_3:15886303-15886322 | None:intergenic | 30.0% |
| ACTTCAAACAAACAGAGAAA+AGG | - | chr8_3:15886358-15886377 | Msa1279110:CDS | 30.0% | |
| TTAGTCTCATGATGCATTAA+CGG | + | chr8_3:15886411-15886430 | None:intergenic | 30.0% | |
| TTAATGCATCATGAGACTAA+GGG | - | chr8_3:15886411-15886430 | Msa1279110:intron | 30.0% | |
| TATAAACCCTCCATATCTTT+GGG | + | chr8_3:15886437-15886456 | None:intergenic | 30.0% | |
| CTCTCTATTCTAACAAACTT+AGG | + | chr8_3:15886601-15886620 | None:intergenic | 30.0% | |
| AATGTATCTACAGAACACAA+AGG | - | chr8_3:15886960-15886979 | Msa1279110:intron | 30.0% | |
| ATGTATCTACAGAACACAAA+GGG | - | chr8_3:15886961-15886980 | Msa1279110:intron | 30.0% | |
| !!! | TTTTTGTTGATGGCTTTGTT+TGG | - | chr8_3:15887194-15887213 | Msa1279110:CDS | 30.0% |
| TTAGAAATCCAATAAGAGTG+TGG | + | chr8_3:15887331-15887350 | None:intergenic | 30.0% | |
| TGCATTGTATGTAACTTATG+TGG | + | chr8_3:15887471-15887490 | None:intergenic | 30.0% | |
| GTCAAACAAGATGACTTTAT+TGG | + | chr8_3:15887581-15887600 | None:intergenic | 30.0% | |
| CATACATATTTGTGACTTCA+TGG | + | chr8_3:15887691-15887710 | None:intergenic | 30.0% | |
| !!! | GTTAATCGGTGATTTTTTTC+TGG | - | chr8_3:15888091-15888110 | Msa1279110:intron | 30.0% |
| TCCCTTACTTTCACATTAAA+TGG | - | chr8_3:15888133-15888152 | Msa1279110:intron | 30.0% | |
| CACCATTTAATGTGAAAGTA+AGG | + | chr8_3:15888138-15888157 | None:intergenic | 30.0% | |
| CTTACTTTCACATTAAATGG+TGG | - | chr8_3:15888136-15888155 | Msa1279110:intron | 30.0% | |
| TTCACATTAAATGGTGGTTA+AGG | - | chr8_3:15888142-15888161 | Msa1279110:intron | 30.0% | |
| TGAGCAAATTCGAATTCAAA+AGG | + | chr8_3:15888327-15888346 | None:intergenic | 30.0% | |
| CCCTATTTATTACTACTTTC+AGG | - | chr8_3:15888355-15888374 | Msa1279110:CDS | 30.0% | |
| CCCTGAAAGTAGTAATAAAT+AGG | + | chr8_3:15888359-15888378 | None:intergenic | 30.0% | |
| !! | AGTTTGGAAAAGGGTTTTGA+CGG | + | chr8_3:15881907-15881926 | None:intergenic | 35.0% |
| !!! | ACAATCATTACCGGTTTTCT+CGG | - | chr8_3:15882059-15882078 | Msa1279110:intron | 35.0% |
| !! | TAAACTATTAGGGCCTTGTT+TGG | + | chr8_3:15882189-15882208 | None:intergenic | 35.0% |
| !! | GTGTTGCTTATATTCGAGAT+TGG | + | chr8_3:15882231-15882250 | None:intergenic | 35.0% |
| ! | ATGCAACAAGTTCTAATGGA+GGG | - | chr8_3:15882380-15882399 | Msa1279110:intron | 35.0% |
| GAGAATATGATTCAGAAGAG+TGG | + | chr8_3:15882645-15882664 | None:intergenic | 35.0% | |
| GATAGCTGTCATTGAAAATG+AGG | - | chr8_3:15882685-15882704 | Msa1279110:intron | 35.0% | |
| TGTTCTACACTCAATAACTG+TGG | - | chr8_3:15882717-15882736 | Msa1279110:intron | 35.0% | |
| GTTCTACACTCAATAACTGT+GGG | - | chr8_3:15882718-15882737 | Msa1279110:intron | 35.0% | |
| TTGCTGAAATAAAAGGCTGT+CGG | + | chr8_3:15882758-15882777 | None:intergenic | 35.0% | |
| !!! | TACCGATGGTTTGTTTTCAT+AGG | + | chr8_3:15882863-15882882 | None:intergenic | 35.0% |
| !! | TTTGGTGAGGTTGATATTGA+TGG | - | chr8_3:15883067-15883086 | Msa1279110:intron | 35.0% |
| GAATGGTGAAGACATTATCA+TGG | - | chr8_3:15883117-15883136 | Msa1279110:intron | 35.0% | |
| AGTTAAAATGCTGTTGGAGT+TGG | - | chr8_3:15883180-15883199 | Msa1279110:intron | 35.0% | |
| ! | CACATTGTTATTGAAACGAC+AGG | - | chr8_3:15883229-15883248 | Msa1279110:intron | 35.0% |
| TAAGTTTCTCTCGTTGTTCA+AGG | - | chr8_3:15883256-15883275 | Msa1279110:intron | 35.0% | |
| ! | GATTTTGTGCTTTGTGTACT+GGG | - | chr8_3:15883278-15883297 | Msa1279110:intron | 35.0% |
| ! | ATTTTGTGCTTTGTGTACTG+GGG | - | chr8_3:15883279-15883298 | Msa1279110:intron | 35.0% |
| TGCCTGAAATTCACTTTGTT+TGG | - | chr8_3:15883377-15883396 | Msa1279110:intron | 35.0% | |
| ! | GCCTGAAATTCACTTTGTTT+GGG | - | chr8_3:15883378-15883397 | Msa1279110:intron | 35.0% |
| TCCCAAACAAAGTGAATTTC+AGG | + | chr8_3:15883382-15883401 | None:intergenic | 35.0% | |
| AAAAGTTGGAGAACCATGAA+GGG | + | chr8_3:15883574-15883593 | None:intergenic | 35.0% | |
| AAAAAGTTGGAGAACCATGA+AGG | + | chr8_3:15883575-15883594 | None:intergenic | 35.0% | |
| !!! | CATGGTTCTCCAACTTTTTT+TGG | - | chr8_3:15883576-15883595 | Msa1279110:intron | 35.0% |
| TCTGAGTATGTTAAACTGGA+TGG | - | chr8_3:15883776-15883795 | Msa1279110:intron | 35.0% | |
| CTGAGTATGTTAAACTGGAT+GGG | - | chr8_3:15883777-15883796 | Msa1279110:intron | 35.0% | |
| TGAGTATGTTAAACTGGATG+GGG | - | chr8_3:15883778-15883797 | Msa1279110:intron | 35.0% | |
| !! | CTTGCTTTTGCAGATAGATT+TGG | - | chr8_3:15884027-15884046 | Msa1279110:intron | 35.0% |
| ACATGTTCATTTCATGAACC+CGG | + | chr8_3:15884200-15884219 | None:intergenic | 35.0% | |
| ! | TGTTCTGAATTACACTACTC+AGG | + | chr8_3:15884312-15884331 | None:intergenic | 35.0% |
| ATTGCAAAAATTCACCTCCA+TGG | - | chr8_3:15884353-15884372 | Msa1279110:intron | 35.0% | |
| !! | ATGCTATCTTGACTTGCTAA+AGG | - | chr8_3:15884388-15884407 | Msa1279110:intron | 35.0% |
| !! | TGCTATCTTGACTTGCTAAA+GGG | - | chr8_3:15884389-15884408 | Msa1279110:intron | 35.0% |
| ATGCAGCATTGTTTAAATGG+TGG | - | chr8_3:15884430-15884449 | Msa1279110:intron | 35.0% | |
| ! | GCATTGTTTAAATGGTGGAA+TGG | - | chr8_3:15884435-15884454 | Msa1279110:intron | 35.0% |
| TGAAAGGCAGTCTTAGAATA+CGG | + | chr8_3:15884572-15884591 | None:intergenic | 35.0% | |
| !! | TTCTAAGACTGCCTTTCAAT+TGG | - | chr8_3:15884574-15884593 | Msa1279110:intron | 35.0% |
| ! | TCACCGTGAAAACAAAGTTT+TGG | + | chr8_3:15884644-15884663 | None:intergenic | 35.0% |
| ACTCATATTGGAAGATCTAC+AGG | + | chr8_3:15884683-15884702 | None:intergenic | 35.0% | |
| TTGTCAGCATATCAATGGAA+TGG | - | chr8_3:15885003-15885022 | Msa1279110:intron | 35.0% | |
| GTTGACATAGACTTTGTTCT+TGG | - | chr8_3:15885055-15885074 | Msa1279110:intron | 35.0% | |
| ! | ATAGACTTTGTTCTTGGTGT+GGG | - | chr8_3:15885061-15885080 | Msa1279110:intron | 35.0% |
| GAATTTGCAGCAAATACAGA+CGG | + | chr8_3:15885181-15885200 | None:intergenic | 35.0% | |
| ! | AAGTGACAACAAGGTTCTAA+GGG | + | chr8_3:15885309-15885328 | None:intergenic | 35.0% |
| AAAGTGACAACAAGGTTCTA+AGG | + | chr8_3:15885310-15885329 | None:intergenic | 35.0% | |
| GCAGTCAACTATAACAAGAA+AGG | + | chr8_3:15885352-15885371 | None:intergenic | 35.0% | |
| TTATAGTTGACTGCAGTATG+AGG | - | chr8_3:15885358-15885377 | Msa1279110:CDS | 35.0% | |
| !! | TTTGTTGTTAACGGATCATG+TGG | - | chr8_3:15885402-15885421 | Msa1279110:CDS | 35.0% |
| GTCTGTGTATCCCTATAAAT+AGG | + | chr8_3:15885705-15885724 | None:intergenic | 35.0% | |
| TTTAGTAAGCTTCAGCTTGA+GGG | + | chr8_3:15885970-15885989 | None:intergenic | 35.0% | |
| AAACGTAACAACTGTGACAA+TGG | - | chr8_3:15886020-15886039 | Msa1279110:intron | 35.0% | |
| ATTGGCGTTCTTGATTCTTT+GGG | + | chr8_3:15886105-15886124 | None:intergenic | 35.0% | |
| AATTGGCGTTCTTGATTCTT+TGG | + | chr8_3:15886106-15886125 | None:intergenic | 35.0% | |
| AAGAATCAAGAACGCCAATT+TGG | - | chr8_3:15886106-15886125 | Msa1279110:intron | 35.0% | |
| AGAATCAAGAACGCCAATTT+GGG | - | chr8_3:15886107-15886126 | Msa1279110:intron | 35.0% | |
| ! | TCAATTAAGGCCTCATTTTC+TGG | + | chr8_3:15886262-15886281 | None:intergenic | 35.0% |
| !! | ACAAACAGAGAAAAGGTGTT+AGG | - | chr8_3:15886365-15886384 | Msa1279110:CDS | 35.0% |
| GTTAATGCATCATGAGACTA+AGG | - | chr8_3:15886410-15886429 | Msa1279110:intron | 35.0% | |
| GTATAAACCCTCCATATCTT+TGG | + | chr8_3:15886438-15886457 | None:intergenic | 35.0% | |
| AAGGGATTTACAGAGGAAAA+TGG | + | chr8_3:15886669-15886688 | None:intergenic | 35.0% | |
| GGAAAATAAGGGATTTACAG+AGG | + | chr8_3:15886676-15886695 | None:intergenic | 35.0% | |
| CGAAGCTTCAGTATTATTGA+TGG | + | chr8_3:15886697-15886716 | None:intergenic | 35.0% | |
| TTCCTAACAGCTCAATCTTT+CGG | - | chr8_3:15886764-15886783 | Msa1279110:intron | 35.0% | |
| TGTTTCAACATTCACATCGA+TGG | - | chr8_3:15887170-15887189 | Msa1279110:intron | 35.0% | |
| !!! | CATCGATGGTTTTTTGTTGA+TGG | - | chr8_3:15887184-15887203 | Msa1279110:intron | 35.0% |
| TTGGTCATCATGATTGATTG+AGG | + | chr8_3:15887295-15887314 | None:intergenic | 35.0% | |
| ATCATGATGACCAAGTTAAC+AGG | - | chr8_3:15887301-15887320 | Msa1279110:CDS | 35.0% | |
| ACTATGCATTCTTAAAGCCT+TGG | + | chr8_3:15887522-15887541 | None:intergenic | 35.0% | |
| ACAAGATGACTTTATTGGGT+TGG | + | chr8_3:15887576-15887595 | None:intergenic | 35.0% | |
| ACTTCATGGAGAAATGAGAA+TGG | + | chr8_3:15887677-15887696 | None:intergenic | 35.0% | |
| ACAACCTCTTGTGTAAAAAC+AGG | - | chr8_3:15887816-15887835 | Msa1279110:intron | 35.0% | |
| CAACCTCTTGTGTAAAAACA+GGG | - | chr8_3:15887817-15887836 | Msa1279110:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr8_3:15887823-15887842 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr8_3:15887822-15887841 | Msa1279110:intron | 35.0% | |
| ! | GTTGCCCTTTTATTATTGCT+GGG | - | chr8_3:15887915-15887934 | Msa1279110:intron | 35.0% |
| CATGCCCAGCAATAATAAAA+GGG | + | chr8_3:15887922-15887941 | None:intergenic | 35.0% | |
| ATGTTTCTCCCTTACTTTCA+CGG | - | chr8_3:15887985-15888004 | Msa1279110:intron | 35.0% | |
| ! | GTTGCCCTTTTATTATTGCT+GGG | - | chr8_3:15887915-15887934 | Msa1279110:intron | 35.0% |
| CATGCCCAGCAATAATAAAA+GGG | + | chr8_3:15887922-15887941 | None:intergenic | 35.0% | |
| GGCATGGTCATTATGTTAAT+CGG | - | chr8_3:15887936-15887955 | Msa1279110:intron | 35.0% | |
| ! | TGAGAGATTGGTTGAAGAAA+AGG | - | chr8_3:15888178-15888197 | Msa1279110:intron | 35.0% |
| AGACACCTTTCATTCTGTAT+AGG | + | chr8_3:15888210-15888229 | None:intergenic | 35.0% | |
| !! | ATACAGAATGAAAGGTGTCT+TGG | - | chr8_3:15888210-15888229 | Msa1279110:intron | 35.0% |
| CTGAAACACATATCGTTGTT+CGG | + | chr8_3:15888248-15888267 | None:intergenic | 35.0% | |
| ATAAGCTTGTGTTCATTGGA+AGG | - | chr8_3:15888441-15888460 | Msa1279110:CDS | 35.0% | |
| TGTGTTCATTGGAAGGAATT+TGG | - | chr8_3:15888448-15888467 | Msa1279110:CDS | 35.0% | |
| GGGATGATGATTGAACAGTT+TGG | + | chr8_3:15881923-15881942 | None:intergenic | 40.0% | |
| GAAATTGGAACGGAGTTGAA+GGG | + | chr8_3:15881943-15881962 | None:intergenic | 40.0% | |
| GTTCCAGCTACAATCATTAC+CGG | - | chr8_3:15882050-15882069 | Msa1279110:intron | 40.0% | |
| AAACCGGTAATGATTGTAGC+TGG | + | chr8_3:15882056-15882075 | None:intergenic | 40.0% | |
| ! | CATGCAACAAGTTCTAATGG+AGG | - | chr8_3:15882379-15882398 | Msa1279110:intron | 40.0% |
| ! | AGTTCTAATGGAGGGAAGTT+TGG | - | chr8_3:15882388-15882407 | Msa1279110:intron | 40.0% |
| GTTCTAATGGAGGGAAGTTT+GGG | - | chr8_3:15882389-15882408 | Msa1279110:intron | 40.0% | |
| !! | TATTAGAGTACTGCTTAGCG+AGG | - | chr8_3:15882580-15882599 | Msa1279110:intron | 40.0% |
| CATATTCTCACATCCCAACA+TGG | - | chr8_3:15882656-15882675 | Msa1279110:intron | 40.0% | |
| ACACTCAATAACTGTGGGTT+AGG | - | chr8_3:15882723-15882742 | Msa1279110:intron | 40.0% | |
| TCACAGGAAAAAGATACCGA+TGG | + | chr8_3:15882877-15882896 | None:intergenic | 40.0% | |
| CTTAGTCGAGTCAATATCAC+AGG | + | chr8_3:15882893-15882912 | None:intergenic | 40.0% | |
| AAGGGAATGATTTGAGTGTG+TGG | - | chr8_3:15882970-15882989 | Msa1279110:intron | 40.0% | |
| TCTGGCTGTTGTATGTAGTT+TGG | - | chr8_3:15883049-15883068 | Msa1279110:intron | 40.0% | |
| ! | CTGTTGTATGTAGTTTGGTG+AGG | - | chr8_3:15883054-15883073 | Msa1279110:intron | 40.0% |
| ! | GGTTGATATTGATGGATCAC+TGG | - | chr8_3:15883075-15883094 | Msa1279110:intron | 40.0% |
| GCTAGTCATTCTTCTGTGAA+TGG | - | chr8_3:15883100-15883119 | Msa1279110:intron | 40.0% | |
| ! | AAATGCTGTTGGAGTTGGTT+AGG | - | chr8_3:15883185-15883204 | Msa1279110:intron | 40.0% |
| ! | GGATTTTGTGCTTTGTGTAC+TGG | - | chr8_3:15883277-15883296 | Msa1279110:intron | 40.0% |
| ! | TTTTGTGCTTTGTGTACTGG+GGG | - | chr8_3:15883280-15883299 | Msa1279110:intron | 40.0% |
| ! | TTGTTTGGGACTTCGATCAT+AGG | - | chr8_3:15883392-15883411 | Msa1279110:CDS | 40.0% |
| AAAGTTTCAATAACAGGGGC+TGG | + | chr8_3:15883737-15883756 | None:intergenic | 40.0% | |
| TGCCATGCAACATTTGAATG+AGG | - | chr8_3:15883826-15883845 | Msa1279110:intron | 40.0% | |
| CACCTCATTCAAATGTTGCA+TGG | + | chr8_3:15883831-15883850 | None:intergenic | 40.0% | |
| TGAGGTGAAACCAAGATTTG+TGG | - | chr8_3:15883844-15883863 | Msa1279110:intron | 40.0% | |
| ACCAAGATTTGTGGTCAATG+AGG | - | chr8_3:15883853-15883872 | Msa1279110:intron | 40.0% | |
| ! | TTTTGAACAAGGCAAGCTTC+TGG | - | chr8_3:15883909-15883928 | Msa1279110:intron | 40.0% |
| AGGTGTGTTTCAGTTACTTG+TGG | - | chr8_3:15884089-15884108 | Msa1279110:intron | 40.0% | |
| ! | GTTTAAATGGTGGAATGGCA+TGG | - | chr8_3:15884440-15884459 | Msa1279110:intron | 40.0% |
| GATGTGGGGGTTGTAAAAAT+CGG | + | chr8_3:15884466-15884485 | None:intergenic | 40.0% | |
| AACTTGAAAAAGGGATGTGG+GGG | + | chr8_3:15884479-15884498 | None:intergenic | 40.0% | |
| CAACTTGAAAAAGGGATGTG+GGG | + | chr8_3:15884480-15884499 | None:intergenic | 40.0% | |
| GCAACTTGAAAAAGGGATGT+GGG | + | chr8_3:15884481-15884500 | None:intergenic | 40.0% | |
| GCGATTGGCAACTTGAAAAA+GGG | + | chr8_3:15884488-15884507 | None:intergenic | 40.0% | |
| TGCGATTGGCAACTTGAAAA+AGG | + | chr8_3:15884489-15884508 | None:intergenic | 40.0% | |
| ACATGTGTATATTGGGGAGA+TGG | - | chr8_3:15884837-15884856 | Msa1279110:intron | 40.0% | |
| CATAGACTTTGTTCTTGGTG+TGG | - | chr8_3:15885060-15885079 | Msa1279110:intron | 40.0% | |
| TGGGAGGATATGATATTCAG+AGG | - | chr8_3:15885080-15885099 | Msa1279110:intron | 40.0% | |
| ATATTGCAGAATCGAAGCTG+AGG | - | chr8_3:15885227-15885246 | Msa1279110:intron | 40.0% | |
| AAGCATCTGGCATAATGCAA+TGG | + | chr8_3:15885468-15885487 | None:intergenic | 40.0% | |
| CATGATTTGAATCCTGGCAA+GGG | - | chr8_3:15885805-15885824 | Msa1279110:intron | 40.0% | |
| ! | TGTTTGTATTTTCCCTTGCC+AGG | + | chr8_3:15885820-15885839 | None:intergenic | 40.0% |
| TTAGTAAGCTTCAGCTTGAG+GGG | + | chr8_3:15885969-15885988 | None:intergenic | 40.0% | |
| CTTTAGTAAGCTTCAGCTTG+AGG | + | chr8_3:15885971-15885990 | None:intergenic | 40.0% | |
| GCATTCGTTTGTTCCCAAAT+TGG | + | chr8_3:15886123-15886142 | None:intergenic | 40.0% | |
| GAGTAGTTGCTTCTACTAGA+TGG | + | chr8_3:15886158-15886177 | None:intergenic | 40.0% | |
| GGCCTAATATCATTGCAGTT+TGG | + | chr8_3:15886229-15886248 | None:intergenic | 40.0% | |
| TGTGGTGCACCTTTCAATTA+AGG | + | chr8_3:15886275-15886294 | None:intergenic | 40.0% | |
| ! | CTTCGGACCCAATATCATTT+TGG | + | chr8_3:15886310-15886329 | None:intergenic | 40.0% |
| ACACCATCAAGTATGTGCTT+CGG | + | chr8_3:15886327-15886346 | None:intergenic | 40.0% | |
| ! | AGGACTGGTACACAAGTTAT+TGG | - | chr8_3:15886385-15886404 | Msa1279110:intron | 40.0% |
| GATAGTGAGTCCAGTAATCT+GGG | - | chr8_3:15886561-15886580 | Msa1279110:CDS | 40.0% | |
| TCATGATTGATTGAGGACCA+AGG | + | chr8_3:15887288-15887307 | None:intergenic | 40.0% | |
| GTGTGGAATTCCTGTTAACT+TGG | + | chr8_3:15887314-15887333 | None:intergenic | 40.0% | |
| CAGGAATTCCACACTCTTAT+TGG | - | chr8_3:15887320-15887339 | Msa1279110:CDS | 40.0% | |
| TGCATTTGCTTGTGGAATAC+AGG | - | chr8_3:15887397-15887416 | Msa1279110:intron | 40.0% | |
| !! | TTCTGGTGTCATAGAAACCA+AGG | - | chr8_3:15887502-15887521 | Msa1279110:intron | 40.0% |
| !!! | TGACTGTGCATTGACTTTTC+AGG | - | chr8_3:15887635-15887654 | Msa1279110:intron | 40.0% |
| ATTGTTGTCATGTGACCGTA+AGG | - | chr8_3:15887772-15887791 | Msa1279110:CDS | 40.0% | |
| ! | TTACACAAGAGGTTGTTTCC+AGG | + | chr8_3:15887812-15887831 | None:intergenic | 40.0% |
| CGTACAATACACCAAATGGT+GGG | - | chr8_3:15887848-15887867 | Msa1279110:intron | 40.0% | |
| GCAATAATAAAAGGGCAACC+CGG | + | chr8_3:15887914-15887933 | None:intergenic | 40.0% | |
| ! | GGTTGCCCTTTTATTATTGC+TGG | - | chr8_3:15887914-15887933 | Msa1279110:intron | 40.0% |
| CCATGCCCAGCAATAATAAA+AGG | + | chr8_3:15887923-15887942 | None:intergenic | 40.0% | |
| ! | CCTTTTATTATTGCTGGGCA+TGG | - | chr8_3:15887920-15887939 | Msa1279110:intron | 40.0% |
| ! | GGTTGCCCTTTTATTATTGC+TGG | - | chr8_3:15887914-15887933 | Msa1279110:intron | 40.0% |
| CCATGCCCAGCAATAATAAA+AGG | + | chr8_3:15887923-15887942 | None:intergenic | 40.0% | |
| ! | CCTTTTATTATTGCTGGGCA+TGG | - | chr8_3:15887920-15887939 | Msa1279110:intron | 40.0% |
| TGGTGGTTAAGGTTGAAGAT+TGG | - | chr8_3:15888153-15888172 | Msa1279110:intron | 40.0% | |
| !! | TGAAGATTGGCTTGAGAGAT+TGG | - | chr8_3:15888166-15888185 | Msa1279110:intron | 40.0% |
| ! | GATTGGTTGAAGAAAAGGAG+AGG | - | chr8_3:15888183-15888202 | Msa1279110:intron | 40.0% |
| GAGGACCTATACAGAATGAA+AGG | - | chr8_3:15888202-15888221 | Msa1279110:intron | 40.0% | |
| CGAACAACGATATGTGTTTC+AGG | - | chr8_3:15888246-15888265 | Msa1279110:intron | 40.0% | |
| GGAAATTGGAACGGAGTTGA+AGG | + | chr8_3:15881944-15881963 | None:intergenic | 45.0% | |
| AACAGAAGCTTCTTCGCCAT+GGG | + | chr8_3:15882021-15882040 | None:intergenic | 45.0% | |
| !! | GCTTAGCGAGGCTCTTATTT+TGG | - | chr8_3:15882592-15882611 | Msa1279110:intron | 45.0% |
| TGAACACAATACCTCGAGCA+GGG | + | chr8_3:15882942-15882961 | None:intergenic | 45.0% | |
| ATGAACACAATACCTCGAGC+AGG | + | chr8_3:15882943-15882962 | None:intergenic | 45.0% | |
| !! | GAGTGTGTGGAGTGTTTTTG+AGG | - | chr8_3:15882983-15883002 | Msa1279110:intron | 45.0% |
| GCCTCATTGACCACAAATCT+TGG | + | chr8_3:15883857-15883876 | None:intergenic | 45.0% | |
| ! | TTTTGCAATCTGCGCTTCTC+TGG | + | chr8_3:15884342-15884361 | None:intergenic | 45.0% |
| !! | ATCTATGACTTGCTCCATGG+AGG | + | chr8_3:15884370-15884389 | None:intergenic | 45.0% |
| !! | AGCATCTATGACTTGCTCCA+TGG | + | chr8_3:15884373-15884392 | None:intergenic | 45.0% |
| AACAATGCTGCATACTTGGG+AGG | + | chr8_3:15884423-15884442 | None:intergenic | 45.0% | |
| GGCAACTTGAAAAAGGGATG+TGG | + | chr8_3:15884482-15884501 | None:intergenic | 45.0% | |
| GGCAGTCTTAGAATACGGAA+GGG | + | chr8_3:15884567-15884586 | None:intergenic | 45.0% | |
| AGGCAGTCTTAGAATACGGA+AGG | + | chr8_3:15884568-15884587 | None:intergenic | 45.0% | |
| TGCAGCAAATACAGACGGAA+AGG | + | chr8_3:15885176-15885195 | None:intergenic | 45.0% | |
| AGAATCGAAGCTGAGGTAGA+AGG | - | chr8_3:15885234-15885253 | Msa1279110:intron | 45.0% | |
| TACCATGTCCACAGTCATCT+GGG | + | chr8_3:15885284-15885303 | None:intergenic | 45.0% | |
| AGGAGCAGTAGAGAATGAAC+TGG | - | chr8_3:15885509-15885528 | Msa1279110:intron | 45.0% | |
| ACGGTCCATGATTTGAATCC+TGG | - | chr8_3:15885799-15885818 | Msa1279110:intron | 45.0% | |
| CCTTGCCAGGATTCAAATCA+TGG | + | chr8_3:15885807-15885826 | None:intergenic | 45.0% | |
| CCATGATTTGAATCCTGGCA+AGG | - | chr8_3:15885804-15885823 | Msa1279110:intron | 45.0% | |
| TAGTAAGCTTCAGCTTGAGG+GGG | + | chr8_3:15885968-15885987 | None:intergenic | 45.0% | |
| ACAACTGTGACAATGGTCTG+AGG | - | chr8_3:15886027-15886046 | Msa1279110:intron | 45.0% | |
| !!! | TCATTTTCTGGAGTGAGCAC+AGG | + | chr8_3:15886250-15886269 | None:intergenic | 45.0% |
| TGTGCTCACTCCAGAAAATG+AGG | - | chr8_3:15886249-15886268 | Msa1279110:intron | 45.0% | |
| !! | CAGAGAAAAGGTGTTAGGAC+TGG | - | chr8_3:15886370-15886389 | Msa1279110:CDS | 45.0% |
| AGACTAAGGGCCCAAAGATA+TGG | - | chr8_3:15886424-15886443 | Msa1279110:intron | 45.0% | |
| TAAGGGCCCAAAGATATGGA+GGG | - | chr8_3:15886428-15886447 | Msa1279110:intron | 45.0% | |
| TATGGAGGGTTTATACTCGC+AGG | - | chr8_3:15886442-15886461 | Msa1279110:intron | 45.0% | |
| ATGGAGGGTTTATACTCGCA+GGG | - | chr8_3:15886443-15886462 | Msa1279110:intron | 45.0% | |
| GGATAGTGAGTCCAGTAATC+TGG | - | chr8_3:15886560-15886579 | Msa1279110:CDS | 45.0% | |
| TTCCATGAGACCCAGATTAC+TGG | + | chr8_3:15886574-15886593 | None:intergenic | 45.0% | |
| ! | ATAGAGAGCACACACTCTGT+AGG | - | chr8_3:15886613-15886632 | Msa1279110:CDS | 45.0% |
| ! | TAGAGAGCACACACTCTGTA+GGG | - | chr8_3:15886614-15886633 | Msa1279110:CDS | 45.0% |
| CTCCGAAAGATTGAGCTGTT+AGG | + | chr8_3:15886769-15886788 | None:intergenic | 45.0% | |
| CTAACAGCTCAATCTTTCGG+AGG | - | chr8_3:15886767-15886786 | Msa1279110:intron | 45.0% | |
| CTCTAGTGTCAGCATTGTTG+CGG | - | chr8_3:15887016-15887035 | Msa1279110:intron | 45.0% | |
| !! | TGGTGCTATGCATTTGCTTG+TGG | - | chr8_3:15887389-15887408 | Msa1279110:intron | 45.0% |
| ! | AATGCAAATGCGTGTCGTTC+TGG | - | chr8_3:15887485-15887504 | Msa1279110:intron | 45.0% |
| ATCATTAACCTTGGCGCAAC+TGG | - | chr8_3:15887745-15887764 | Msa1279110:CDS | 45.0% | |
| ! | CAATTTTACCAGTTGCGCCA+AGG | + | chr8_3:15887756-15887775 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr8_3:15887844-15887863 | Msa1279110:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr8_3:15887847-15887866 | Msa1279110:intron | 45.0% | |
| TTTCTCCCTTACTTTCACGG+TGG | - | chr8_3:15887988-15888007 | Msa1279110:intron | 45.0% | |
| TTCTCCCTTACTTTCACGGT+GGG | - | chr8_3:15887989-15888008 | Msa1279110:intron | 45.0% | |
| !! | AATGAAAGGTGTCTTGGCAG+TGG | - | chr8_3:15888216-15888235 | Msa1279110:intron | 45.0% |
| ATGACAGCCCAGGAAAAACA+TGG | - | chr8_3:15888396-15888415 | Msa1279110:CDS | 45.0% | |
| ! | TGGGTTGCCATGTTTTTCCT+GGG | + | chr8_3:15888406-15888425 | None:intergenic | 45.0% |
| !! | TTGGGTTGCCATGTTTTTCC+TGG | + | chr8_3:15888407-15888426 | None:intergenic | 45.0% |
| GATGAAACTGCCCTCAGAAA+AGG | - | chr8_3:15888470-15888489 | Msa1279110:CDS | 45.0% | |
| !!! | GCCTTTGAAGCCTTTTCTGA+GGG | + | chr8_3:15888483-15888502 | None:intergenic | 45.0% |
| !!! | AGCCTTTGAAGCCTTTTCTG+AGG | + | chr8_3:15888484-15888503 | None:intergenic | 45.0% |
| CAACAGAAGCTTCTTCGCCA+TGG | + | chr8_3:15882022-15882041 | None:intergenic | 50.0% | |
| !!! | ATTACCGGTTTTCTCGGCTC+CGG | - | chr8_3:15882065-15882084 | Msa1279110:intron | 50.0% |
| TCACATCCCAACATGGCAAG+CGG | - | chr8_3:15882663-15882682 | Msa1279110:intron | 50.0% | |
| AGCTATCCGCTTGCCATGTT+GGG | + | chr8_3:15882672-15882691 | None:intergenic | 50.0% | |
| TGTGTATGATACCCTGCTCG+AGG | - | chr8_3:15882928-15882947 | Msa1279110:intron | 50.0% | |
| !! | CTTTAGGGAGTGTCCCTTCA+TGG | - | chr8_3:15883558-15883577 | Msa1279110:intron | 50.0% |
| ! | GACTTTGTTCTTGGTGTGGG+AGG | - | chr8_3:15885064-15885083 | Msa1279110:intron | 50.0% |
| GTACCATGTCCACAGTCATC+TGG | + | chr8_3:15885285-15885304 | None:intergenic | 50.0% | |
| ! | TAGCTCACTGGGTTGAGCTA+AGG | - | chr8_3:15885771-15885790 | Msa1279110:intron | 50.0% |
| ! | AGCTCACTGGGTTGAGCTAA+GGG | - | chr8_3:15885772-15885791 | Msa1279110:intron | 50.0% |
| GGGTTGAGCTAAGGGGTTAA+CGG | - | chr8_3:15885780-15885799 | Msa1279110:intron | 50.0% | |
| ! | CTTGATTCTTTGGGAGCGAG+TGG | + | chr8_3:15886096-15886115 | None:intergenic | 50.0% |
| GGTCCGAAGCACATACTTGA+TGG | - | chr8_3:15886321-15886340 | Msa1279110:intron | 50.0% | |
| CTAAGGGCCCAAAGATATGG+AGG | - | chr8_3:15886427-15886446 | Msa1279110:intron | 50.0% | |
| GCAGGGCAAAGTCAGCTAAA+GGG | - | chr8_3:15886460-15886479 | Msa1279110:intron | 50.0% | |
| CAGGGCAAAGTCAGCTAAAG+GGG | - | chr8_3:15886461-15886480 | Msa1279110:intron | 50.0% | |
| ! | AGTGATAGTGTCACCTGAGC+TGG | - | chr8_3:15886484-15886503 | Msa1279110:intron | 50.0% |
| GTCCAGTAATCTGGGTCTCA+TGG | - | chr8_3:15886569-15886588 | Msa1279110:CDS | 50.0% | |
| ! | AGAGAGCACACACTCTGTAG+GGG | - | chr8_3:15886615-15886634 | Msa1279110:CDS | 50.0% |
| ! | GTATTGCTACTGACTGCCAC+AGG | + | chr8_3:15886647-15886666 | None:intergenic | 50.0% |
| TAGTGTCAGCATTGTTGCGG+AGG | - | chr8_3:15887019-15887038 | Msa1279110:intron | 50.0% | |
| AGTGTCAGCATTGTTGCGGA+GGG | - | chr8_3:15887020-15887039 | Msa1279110:intron | 50.0% | |
| GGGAACTCTTGATCGTGATG+AGG | - | chr8_3:15887040-15887059 | Msa1279110:intron | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | - | chr8_3:15887778-15887797 | Msa1279110:CDS | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | - | chr8_3:15887779-15887798 | Msa1279110:CDS | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | + | chr8_3:15887790-15887809 | None:intergenic | 50.0% | |
| !! | AAAGGTGTCTTGGCAGTGGA+TGG | - | chr8_3:15888220-15888239 | Msa1279110:intron | 50.0% |
| GCCCTCAGAAAAGGCTTCAA+AGG | - | chr8_3:15888479-15888498 | Msa1279110:CDS | 50.0% | |
| AGAAGCTTCTTCGCCATGGG+TGG | + | chr8_3:15882018-15882037 | None:intergenic | 55.0% | |
| CTTTCCGGAGCCGAGAAAAC+CGG | + | chr8_3:15882072-15882091 | None:intergenic | 55.0% | |
| CAGCTATCCGCTTGCCATGT+TGG | + | chr8_3:15882673-15882692 | None:intergenic | 55.0% | |
| !! | TCTGGGTGGCTTGCTGTAGA+GGG | + | chr8_3:15885267-15885286 | None:intergenic | 55.0% |
| !! | ATCTGGGTGGCTTGCTGTAG+AGG | + | chr8_3:15885268-15885287 | None:intergenic | 55.0% |
| CATGTCCACAGTCATCTGGG+TGG | + | chr8_3:15885281-15885300 | None:intergenic | 55.0% | |
| CACCCAGATGACTGTGGACA+TGG | - | chr8_3:15885279-15885298 | Msa1279110:intron | 55.0% | |
| TAAGGAGGACGGTAGCTCAC+TGG | - | chr8_3:15885759-15885778 | Msa1279110:intron | 55.0% | |
| AAGGAGGACGGTAGCTCACT+GGG | - | chr8_3:15885760-15885779 | Msa1279110:intron | 55.0% | |
| ! | GCTCACTGGGTTGAGCTAAG+GGG | - | chr8_3:15885773-15885792 | Msa1279110:intron | 55.0% |
| TCAGCTTGAGGGGGAGTCTT+AGG | + | chr8_3:15885959-15885978 | None:intergenic | 55.0% | |
| ! | GATTCTTTGGGAGCGAGTGG+TGG | + | chr8_3:15886093-15886112 | None:intergenic | 55.0% |
| CGCAGGGCAAAGTCAGCTAA+AGG | - | chr8_3:15886459-15886478 | Msa1279110:intron | 55.0% | |
| TCTGTAGGGGCTGAATCCTG+TGG | - | chr8_3:15886628-15886647 | Msa1279110:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr8_3:15887791-15887810 | Msa1279110:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | + | chr8_3:15887887-15887906 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | + | chr8_3:15887888-15887907 | None:intergenic | 55.0% | |
| GGGTCCCACCGTGAAAGTAA+GGG | + | chr8_3:15887996-15888015 | None:intergenic | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | + | chr8_3:15887887-15887906 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | + | chr8_3:15887888-15887907 | None:intergenic | 55.0% | |
| ! | TCAGGGGGTGCATTCCATGT+TGG | - | chr8_3:15888373-15888392 | Msa1279110:CDS | 55.0% |
| TCCATGTTGGATGACAGCCC+AGG | - | chr8_3:15888386-15888405 | Msa1279110:CDS | 55.0% | |
| TCCTGGGCTGTCATCCAACA+TGG | + | chr8_3:15888390-15888409 | None:intergenic | 55.0% | |
| TCCTCTGCTCCAACCACCCA+TGG | - | chr8_3:15882002-15882021 | Msa1279110:CDS | 60.0% | |
| GCTTCTTCGCCATGGGTGGT+TGG | + | chr8_3:15882014-15882033 | None:intergenic | 60.0% | |
| ! | CGGTTTTCTCGGCTCCGGAA+AGG | - | chr8_3:15882070-15882089 | Msa1279110:intron | 60.0% |
| TGCCTATGCTGCACTGTGCG+AGG | - | chr8_3:15883151-15883170 | Msa1279110:intron | 60.0% | |
| CTCCTCGCACAGTGCAGCAT+AGG | + | chr8_3:15883156-15883175 | None:intergenic | 60.0% | |
| GCAAGCCACCCAGATGACTG+TGG | - | chr8_3:15885273-15885292 | Msa1279110:intron | 60.0% | |
| TCACCTGAGCTGGCTGCTTC+TGG | - | chr8_3:15886494-15886513 | Msa1279110:intron | 60.0% | |
| CTTCCAGAAGCAGCCAGCTC+AGG | + | chr8_3:15886500-15886519 | None:intergenic | 60.0% | |
| CTGAGCTGGCTGCTTCTGGA+AGG | - | chr8_3:15886498-15886517 | Msa1279110:intron | 60.0% | |
| ! | AGCTGGCTGCTTCTGGAAGG+AGG | - | chr8_3:15886501-15886520 | Msa1279110:intron | 60.0% |
| ! | GCTGGCTGCTTCTGGAAGGA+GGG | - | chr8_3:15886502-15886521 | Msa1279110:intron | 60.0% |
| ! | CTGGCTGCTTCTGGAAGGAG+GGG | - | chr8_3:15886503-15886522 | Msa1279110:intron | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr8_3:15887860-15887879 | Msa1279110:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr8_3:15887875-15887894 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr8_3:15887876-15887895 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr8_3:15887875-15887894 | Msa1279110:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr8_3:15887876-15887895 | Msa1279110:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr8_3:15887892-15887911 | Msa1279110:intron | 60.0% | |
| GGGGTCCCACCGTGAAAGTA+AGG | + | chr8_3:15887997-15888016 | None:intergenic | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr8_3:15887875-15887894 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr8_3:15887876-15887895 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr8_3:15887875-15887894 | Msa1279110:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr8_3:15887876-15887895 | Msa1279110:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+TGG | - | chr8_3:15887892-15887911 | Msa1279110:intron | 60.0% | |
| TGCGGGAGCTTCAGTGCACT+GGG | - | chr8_3:15888034-15888053 | Msa1279110:intron | 60.0% | |
| GCCATGGGTGGTTGGAGCAG+AGG | + | chr8_3:15882006-15882025 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr8_3:15887862-15887881 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr8_3:15887877-15887896 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr8_3:15887881-15887900 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr8_3:15887882-15887901 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr8_3:15887893-15887912 | Msa1279110:intron | 65.0% | |
| TTCACGGTGGGACCCCTTCC+CGG | - | chr8_3:15888001-15888020 | Msa1279110:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr8_3:15887877-15887896 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr8_3:15887881-15887900 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr8_3:15887882-15887901 | None:intergenic | 65.0% | |
| CGGGCGGTGACTGTGGGTGT+GGG | + | chr8_3:15888543-15888562 | None:intergenic | 70.0% | |
| TCGGGCGGTGACTGTGGGTG+TGG | + | chr8_3:15888544-15888563 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 15881876 | 15888565 | 15881876 | ID=Msa1279110;Name=Msa1279110 |
| chr8_3 | mRNA | 15881876 | 15888565 | 15881876 | ID=Msa1279110-mRNA-1;Parent=Msa1279110;Name=Msa1279110-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.22|0.2|0.9|1|1|10|51|388 |
| chr8_3 | exon | 15881876 | 15882064 | 15881876 | ID=Msa1279110-mRNA-1:exon:6152;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15883380 | 15883468 | 15883380 | ID=Msa1279110-mRNA-1:exon:6151;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15885141 | 15885205 | 15885141 | ID=Msa1279110-mRNA-1:exon:6150;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15885340 | 15885431 | 15885340 | ID=Msa1279110-mRNA-1:exon:6149;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15885686 | 15885754 | 15885686 | ID=Msa1279110-mRNA-1:exon:6148;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15886351 | 15886401 | 15886351 | ID=Msa1279110-mRNA-1:exon:6147;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15886522 | 15886718 | 15886522 | ID=Msa1279110-mRNA-1:exon:6146;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15887191 | 15887374 | 15887191 | ID=Msa1279110-mRNA-1:exon:6145;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15887735 | 15887800 | 15887735 | ID=Msa1279110-mRNA-1:exon:6144;Parent=Msa1279110-mRNA-1 |
| chr8_3 | exon | 15888350 | 15888565 | 15888350 | ID=Msa1279110-mRNA-1:exon:6143;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15888350 | 15888565 | 15888350 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15887735 | 15887800 | 15887735 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15887191 | 15887374 | 15887191 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15886522 | 15886718 | 15886522 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15886351 | 15886401 | 15886351 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15885686 | 15885754 | 15885686 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15885340 | 15885431 | 15885340 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15885141 | 15885205 | 15885141 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15883380 | 15883468 | 15883380 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | CDS | 15881927 | 15882064 | 15881927 | ID=Msa1279110-mRNA-1:cds;Parent=Msa1279110-mRNA-1 |
| chr8_3 | three_prime_UTR | 15881876 | 15881926 | 15881876 | ID=Msa1279110-mRNA-1:three_prime_utr;Parent=Msa1279110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
