AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1200330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200330 MtrunA17_Chr8g0369841 93.158 380 5 1 7 365 2 381 0.0 702
Msa1200330 MtrunA17_Chr5g0407971 73.121 346 72 1 11 335 8 353 0.0 524
Msa1200330 MtrunA17_Chr5g0407991 63.934 366 110 2 10 354 5 369 5.03e-170 479
Msa1200330 MtrunA17_Chr5g0408001 62.234 376 120 2 11 364 7 382 1.43e-166 470
Msa1200330 MtrunA17_Chr5g0408031 60.484 372 123 3 10 357 6 377 2.03e-160 454
Msa1200330 MtrunA17_Chr5g0408041 59.409 372 128 2 8 356 5 376 4.45e-156 444
Msa1200330 MtrunA17_Chr3g0142131 34.031 382 215 6 6 352 5 384 2.15e-67 217
Msa1200330 MtrunA17_Chr1g0155761 34.293 382 220 5 11 362 18 398 1.27e-64 210
Msa1200330 MtrunA17_Chr6g0483401 32.622 328 188 4 23 328 19 335 5.39e-56 187
Msa1200330 MtrunA17_Chr2g0284261 29.917 361 211 6 13 348 7 350 3.68e-44 156
Msa1200330 MtrunA17_Chr1g0164831 29.859 355 213 6 12 346 1 339 4.28e-43 152
Msa1200330 MtrunA17_Chr5g0413941 30.655 336 196 5 17 330 10 330 1.44e-41 149
Msa1200330 MtrunA17_Chr1g0160181 31.287 342 191 7 14 328 18 342 6.16e-40 145
Msa1200330 MtrunA17_Chr7g0271561 29.787 329 201 4 19 325 12 332 1.15e-38 142
Msa1200330 MtrunA17_Chr3g0114691 28.736 348 213 4 14 339 20 354 1.28e-38 142
Msa1200330 MtrunA17_Chr7g0255561 27.976 336 209 3 14 327 14 338 9.65e-38 139
Msa1200330 MtrunA17_Chr7g0255581 27.976 336 209 3 14 327 14 338 9.65e-38 139
Msa1200330 MtrunA17_Chr3g0114731 27.660 376 228 8 14 363 18 375 1.49e-36 136
Msa1200330 MtrunA17_Chr3g0126101 28.308 325 183 6 31 328 23 324 3.00e-36 134
Msa1200330 MtrunA17_Chr2g0278541 28.205 351 209 6 19 340 17 353 9.99e-36 134
Msa1200330 MtrunA17_Chr5g0413951 27.928 333 203 5 17 327 10 327 5.32e-35 131
Msa1200330 MtrunA17_Chr1g0160171 28.443 334 202 5 14 325 16 334 1.87e-34 130
Msa1200330 MtrunA17_Chr2g0278561 26.979 341 209 6 19 334 20 345 2.77e-34 130
Msa1200330 MtrunA17_Chr5g0404811 30.315 254 157 5 108 354 8 248 2.84e-34 127
Msa1200330 MtrunA17_Chr4g0050891 28.086 324 201 4 19 320 18 331 2.96e-34 129
Msa1200330 MtrunA17_Chr3g0129601 28.852 357 201 7 14 338 29 364 3.86e-34 129
Msa1200330 MtrunA17_Chr4g0059311 27.119 354 217 6 17 344 14 352 4.55e-34 129
Msa1200330 MtrunA17_Chr7g0263101 28.455 369 212 9 13 350 12 359 5.94e-34 129
Msa1200330 MtrunA17_Chr5g0413921 29.552 335 195 7 17 327 10 327 1.86e-33 127
Msa1200330 MtrunA17_Chr3g0081421 28.657 335 205 6 14 325 17 340 1.94e-33 128
Msa1200330 MtrunA17_Chr3g0081511 27.893 337 204 6 14 326 17 338 2.68e-33 127
Msa1200330 MtrunA17_Chr8g0354121 26.627 338 210 5 14 326 13 337 7.91e-33 126
Msa1200330 MtrunA17_Chr1g0186571 28.402 338 200 9 14 327 13 332 2.31e-32 124
Msa1200330 MtrunA17_Chr1g0184221 26.064 376 222 7 11 349 13 369 2.71e-32 124
Msa1200330 MtrunA17_Chr1g0160111 27.077 325 206 3 23 325 16 331 3.65e-32 124
Msa1200330 MtrunA17_Chr1g0186641 26.706 337 207 7 13 326 12 331 4.44e-31 120
Msa1200330 MtrunA17_Chr5g0413931 28.657 335 200 8 19 330 11 329 1.08e-30 119
Msa1200330 MtrunA17_Chr8g0334761 26.857 350 211 6 19 345 15 342 1.18e-30 120
Msa1200330 MtrunA17_Chr1g0150151 29.889 271 169 5 78 342 97 352 2.00e-30 119
Msa1200330 MtrunA17_Chr3g0129591 27.566 341 194 7 18 325 9 329 2.36e-30 119
Msa1200330 MtrunA17_Chr1g0186601 25.770 357 221 8 13 345 15 351 2.73e-30 118
Msa1200330 MtrunA17_Chr8g0334771 26.902 368 222 8 18 353 14 366 4.30e-30 118
Msa1200330 MtrunA17_Chr2g0278551 27.711 332 203 6 19 327 17 334 1.44e-29 117
Msa1200330 MtrunA17_Chr2g0290611 26.829 369 223 8 19 361 17 364 1.59e-29 117
Msa1200330 MtrunA17_Chr3g0114701 27.879 330 202 6 22 328 17 333 4.36e-29 115
Msa1200330 MtrunA17_Chr1g0186611 26.496 351 218 6 13 340 15 348 5.88e-29 115
Msa1200330 MtrunA17_Chr1g0171301 26.100 341 208 8 13 327 15 337 7.12e-29 115
Msa1200330 MtrunA17_Chr4g0050931 27.215 316 201 6 19 332 17 305 9.36e-29 114
Msa1200330 MtrunA17_Chr3g0114711 25.886 367 222 10 25 342 26 391 3.55e-28 113
Msa1200330 MtrunA17_Chr4g0050881 27.859 341 209 5 19 336 14 340 5.46e-28 112
Msa1200330 MtrunA17_Chr5g0413961 27.300 337 202 8 19 332 19 335 7.67e-28 112
Msa1200330 MtrunA17_Chr2g0332001 27.246 345 209 8 14 335 38 363 1.36e-27 112
Msa1200330 MtrunA17_Chr3g0129571 24.590 366 216 9 18 346 11 353 1.83e-27 111
Msa1200330 MtrunA17_Chr1g0182291 26.364 330 201 6 31 336 32 343 1.90e-27 111
Msa1200330 MtrunA17_Chr4g0050941 26.923 338 216 4 19 333 17 346 3.21e-27 110
Msa1200330 MtrunA17_Chr1g0186561 27.219 338 207 6 13 327 15 336 3.96e-27 110
Msa1200330 MtrunA17_Chr6g0463971 25.074 339 209 6 14 325 16 336 6.82e-27 109
Msa1200330 MtrunA17_Chr8g0334751 26.757 370 230 7 6 351 3 355 8.06e-27 109
Msa1200330 MtrunA17_Chr2g0310441 25.076 331 208 4 19 325 15 329 3.24e-26 107
Msa1200330 MtrunA17_Chr1g0177221 32.103 271 135 7 11 253 15 264 1.03e-25 104
Msa1200330 MtrunA17_Chr8g0383731 25.723 346 214 7 21 338 12 342 1.89e-25 105
Msa1200330 MtrunA17_Chr4g0051021 23.944 355 225 7 19 346 19 355 3.82e-25 105
Msa1200330 MtrunA17_Chr4g0073241 26.061 330 201 5 31 335 25 336 4.31e-24 102
Msa1200330 MtrunA17_Chr5g0428881 25.946 370 226 8 14 349 18 373 7.47e-24 101
Msa1200330 MtrunA17_Chr3g0129581 24.928 349 221 6 18 338 9 344 2.95e-23 99.4
Msa1200330 MtrunA17_Chr5g0429001 27.626 257 167 3 74 325 32 274 1.30e-22 97.1
Msa1200330 MtrunA17_Chr7g0227921 25.225 333 207 7 18 326 15 329 1.89e-22 97.1
Msa1200330 MtrunA17_Chr6g0451211 23.209 349 218 9 19 342 25 348 1.09e-21 95.1
Msa1200330 MtrunA17_Chr6g0451201 24.860 358 218 8 19 352 25 355 1.45e-21 94.7
Msa1200330 MtrunA17_Chr5g0441761 25.152 330 205 5 18 325 18 327 3.27e-21 93.6
Msa1200330 MtrunA17_Chr3g0084091 27.734 256 164 5 74 325 11 249 5.23e-21 92.0
Msa1200330 MtrunA17_Chr1g0211801 25.856 263 161 5 11 253 8 256 4.26e-20 89.0
Msa1200330 MtrunA17_Chr5g0399281 26.866 335 204 8 22 331 16 334 4.38e-20 90.1
Msa1200330 MtrunA17_Chr3g0126091 23.011 352 227 11 19 342 16 351 2.40e-17 82.4
Msa1200330 MtrunA17_Chr6g0451261 21.519 316 201 8 28 316 25 320 3.13e-17 83.6
Msa1200330 MtrunA17_Chr2g0278021 27.660 235 159 4 108 340 2 227 1.00e-16 79.7
Msa1200330 MtrunA17_Chr6g0451171 23.270 318 204 7 31 326 29 328 8.71e-16 77.8
Msa1200330 MtrunA17_Chr4g0051001 23.701 308 199 6 19 303 36 330 1.16e-15 77.0
Msa1200330 MtrunA17_Chr6g0451251 24.069 349 214 9 19 342 25 347 3.23e-15 76.3
Msa1200330 MtrunA17_Chr8g0334711 27.933 179 106 3 19 176 15 191 1.56e-14 72.0
Msa1200330 MtrunA17_Chr5g0404801 32.743 113 55 1 14 105 7 119 5.18e-14 68.2
Msa1200330 MtrunA17_Chr4g0056081 23.795 332 209 9 22 325 22 337 5.34e-13 69.3
Msa1200330 MtrunA17_Chr6g0451191 22.967 209 142 4 119 326 13 203 1.11e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200330 AT4G19185.1 64.660 382 108 3 11 365 17 398 1.02e-177 499
Msa1200330 AT5G45370.2 65.057 352 100 2 15 343 20 371 1.48e-162 460
Msa1200330 AT5G45370.4 65.057 352 100 2 15 343 20 371 1.48e-162 460
Msa1200330 AT3G45870.1 65.861 331 88 3 11 320 8 334 1.60e-154 440
Msa1200330 AT5G45370.1 62.500 352 85 3 15 343 20 347 8.99e-152 432
Msa1200330 AT4G19185.2 66.118 304 97 2 68 365 17 320 9.68e-147 418
Msa1200330 AT3G45870.8 65.605 314 83 3 11 303 8 317 1.20e-146 418
Msa1200330 AT5G45370.3 58.912 331 95 2 15 343 20 311 5.00e-133 383
Msa1200330 AT5G45370.6 65.799 269 90 1 77 343 1 269 5.71e-126 363
Msa1200330 AT5G45370.5 65.799 269 90 1 77 343 1 269 5.71e-126 363
Msa1200330 AT3G45870.9 62.879 264 73 3 11 253 8 267 3.57e-113 331
Msa1200330 AT3G45870.5 66.822 214 67 2 107 320 50 259 1.11e-98 295
Msa1200330 AT3G45870.6 66.497 197 62 2 107 303 50 242 6.48e-91 273
Msa1200330 AT3G45870.7 66.497 197 62 2 107 303 50 242 6.48e-91 273
Msa1200330 AT3G45870.2 67.380 187 57 2 134 320 1 183 1.94e-85 259
Msa1200330 AT1G75500.1 34.513 339 192 4 14 330 19 349 9.84e-62 203
Msa1200330 AT1G75500.2 34.513 339 192 4 14 330 19 349 9.84e-62 203
Msa1200330 AT3G45870.4 62.416 149 52 2 105 253 1 145 7.04e-60 191
Msa1200330 AT3G18200.2 33.239 355 187 6 18 347 38 367 1.21e-59 197
Msa1200330 AT3G53210.1 33.531 337 188 4 14 328 9 331 1.46e-57 191
Msa1200330 AT3G45870.3 61.905 147 52 2 107 253 50 192 2.61e-57 186
Msa1200330 AT3G53210.2 32.740 281 174 3 56 335 15 281 8.10e-46 159
Msa1200330 AT3G53210.3 32.950 261 139 4 14 252 9 255 2.72e-43 151
Msa1200330 AT3G18200.1 33.588 262 145 5 90 347 1 237 2.81e-40 143
Msa1200330 AT4G30420.2 29.738 343 201 5 8 325 2 329 1.02e-39 145
Msa1200330 AT4G30420.1 30.030 333 193 5 18 325 2 319 2.56e-39 144
Msa1200330 AT1G21890.1 30.435 345 212 4 5 327 1 339 6.01e-39 143
Msa1200330 AT5G07050.1 28.852 357 222 7 14 346 17 365 2.73e-38 141
Msa1200330 AT1G09380.1 28.528 326 198 5 18 320 11 324 1.53e-37 139
Msa1200330 AT2G39510.1 27.604 384 226 9 13 364 6 369 7.88e-37 137
Msa1200330 AT4G01430.1 26.923 364 218 7 13 352 7 346 5.96e-36 134
Msa1200330 AT1G44800.1 27.485 342 211 5 7 326 3 329 1.01e-35 134
Msa1200330 AT1G11460.1 27.647 340 206 7 13 328 14 337 1.59e-35 132
Msa1200330 AT4G08300.1 28.280 343 210 5 7 326 3 332 1.63e-35 133
Msa1200330 AT4G01440.1 26.705 352 214 6 13 342 8 337 5.28e-35 132
Msa1200330 AT3G30340.1 27.405 343 213 5 9 329 5 333 2.16e-34 130
Msa1200330 AT4G08290.1 28.161 348 212 7 19 342 17 350 4.16e-34 130
Msa1200330 AT1G11450.3 27.647 340 205 7 13 328 14 336 4.57e-34 129
Msa1200330 AT1G01070.1 27.273 363 216 9 19 351 20 364 1.09e-33 128
Msa1200330 AT2G40900.1 26.786 336 204 6 14 327 10 325 1.30e-32 126
Msa1200330 AT5G40240.2 27.654 358 207 10 3 325 14 354 1.30e-31 123
Msa1200330 AT5G40240.1 27.976 336 198 8 17 325 22 340 4.65e-31 121
Msa1200330 AT5G40240.3 27.976 336 198 8 17 325 22 340 4.65e-31 121
Msa1200330 AT1G21890.2 29.630 324 200 4 5 306 1 318 9.88e-31 120
Msa1200330 AT2G37460.1 29.167 336 192 9 18 327 18 333 1.15e-30 120
Msa1200330 AT3G28050.1 28.276 290 177 7 45 325 59 326 6.11e-30 118
Msa1200330 AT4G01440.3 26.837 313 192 5 13 303 8 305 6.12e-30 117
Msa1200330 AT4G01430.2 27.129 317 194 6 11 303 5 308 7.75e-30 117
Msa1200330 AT5G64700.1 28.824 340 204 5 14 327 7 334 8.29e-30 117
Msa1200330 AT1G43650.1 26.786 336 206 4 14 327 6 323 1.02e-29 117
Msa1200330 AT2G37450.2 28.909 339 209 8 19 352 13 324 5.53e-29 115
Msa1200330 AT1G01070.2 28.839 267 166 5 72 332 47 295 1.29e-28 114
Msa1200330 AT1G11450.2 27.365 296 174 7 57 328 7 285 1.40e-27 110
Msa1200330 AT1G11450.5 26.974 304 181 7 49 328 6 292 1.44e-27 110
Msa1200330 AT1G11450.4 26.349 315 191 7 13 303 14 311 7.83e-27 108
Msa1200330 AT3G28100.1 29.249 253 163 4 77 327 97 335 8.00e-27 109
Msa1200330 AT3G28130.5 29.921 254 162 4 76 327 9 248 8.62e-27 107
Msa1200330 AT3G28130.1 29.921 254 162 4 76 327 9 248 8.62e-27 107
Msa1200330 AT1G11450.1 27.692 260 168 5 72 328 2 244 8.76e-27 107
Msa1200330 AT3G56620.1 26.140 329 202 6 14 320 10 319 1.62e-26 109
Msa1200330 AT5G13670.1 26.163 344 194 8 18 326 11 329 2.82e-26 108
Msa1200330 AT3G28070.2 28.458 253 165 4 77 327 8 246 5.33e-26 105
Msa1200330 AT3G28130.2 29.921 254 162 4 76 327 95 334 6.20e-26 107
Msa1200330 AT5G40230.1 26.062 353 220 8 17 340 23 363 7.80e-26 107
Msa1200330 AT1G25270.1 24.384 365 237 7 14 354 2 351 8.53e-26 106
Msa1200330 AT5G40210.1 27.731 357 203 9 9 342 8 332 1.72e-25 105
Msa1200330 AT1G68170.1 24.100 361 238 5 14 351 2 349 2.41e-25 105
Msa1200330 AT1G68170.2 24.100 361 238 5 14 351 12 359 3.11e-25 105
Msa1200330 AT3G28070.1 28.458 253 165 4 77 327 100 338 3.14e-25 105
Msa1200330 AT4G01440.4 28.137 263 152 5 13 253 8 255 3.73e-25 103
Msa1200330 AT4G01440.5 25.200 250 164 4 94 342 2 229 2.44e-24 100
Msa1200330 AT4G01440.2 25.200 250 164 4 94 342 2 229 2.44e-24 100
Msa1200330 AT4G15540.1 29.317 249 150 3 78 325 101 324 7.69e-24 101
Msa1200330 AT4G15540.2 29.317 249 150 3 78 325 101 324 7.69e-24 101
Msa1200330 AT3G28080.5 27.451 255 165 6 77 327 8 246 2.91e-22 95.5
Msa1200330 AT3G28080.7 27.451 255 165 6 77 327 8 246 2.91e-22 95.5
Msa1200330 AT3G28080.8 27.451 255 165 6 77 327 8 246 2.91e-22 95.5
Msa1200330 AT3G28080.6 27.451 255 165 6 77 327 8 246 2.91e-22 95.5
Msa1200330 AT3G28080.2 27.451 255 165 6 77 327 89 327 1.44e-21 94.7
Msa1200330 AT4G01430.3 26.794 209 138 3 123 329 2 197 5.38e-21 90.9
Msa1200330 AT4G28040.1 24.202 376 217 10 13 359 6 342 1.81e-20 91.7
Msa1200330 AT4G28040.5 24.202 376 217 10 13 359 6 342 1.81e-20 91.7
Msa1200330 AT4G28040.3 24.202 376 217 10 13 359 6 342 1.81e-20 91.7
Msa1200330 AT4G28040.4 24.202 376 217 10 13 359 6 342 1.81e-20 91.7
Msa1200330 AT4G28040.2 24.202 376 217 10 13 359 6 342 1.81e-20 91.7
Msa1200330 AT1G70260.1 22.346 358 232 6 18 346 15 355 9.21e-20 90.1
Msa1200330 AT4G08290.2 27.626 257 149 5 19 252 17 259 2.33e-19 87.4
Msa1200330 AT2G37450.3 30.315 254 152 7 79 327 1 234 3.06e-19 86.7
Msa1200330 AT3G28080.1 26.154 325 199 8 28 327 27 335 8.86e-19 87.0
Msa1200330 AT3G30340.2 25.468 267 163 5 9 253 5 257 2.48e-18 84.3
Msa1200330 AT3G28070.3 27.273 231 148 5 77 303 100 314 4.74e-18 84.3
Msa1200330 AT4G01450.2 25.672 335 208 4 13 325 8 323 3.84e-17 82.0
Msa1200330 AT4G01450.1 24.920 313 194 4 13 303 8 301 4.42e-17 82.0
Msa1200330 AT4G24980.1 24.252 301 159 6 31 326 3 239 5.40e-17 80.5
Msa1200330 AT3G28130.3 27.477 222 145 4 108 327 2 209 6.09e-17 79.7
Msa1200330 AT5G47470.2 24.324 333 204 9 19 325 62 372 1.06e-16 81.3
Msa1200330 AT5G47470.3 24.324 333 204 9 19 325 62 372 1.10e-16 81.3
Msa1200330 AT5G47470.1 24.324 333 204 9 19 325 34 344 1.22e-16 80.9
Msa1200330 AT2G37450.1 26.433 314 167 8 19 327 13 267 1.42e-16 79.7
Msa1200330 AT1G43650.2 27.200 250 143 4 14 242 6 237 1.99e-16 79.0
Msa1200330 AT3G28070.5 25.676 222 149 4 108 327 2 209 4.50e-16 77.0
Msa1200330 AT1G60050.1 22.316 354 226 5 19 339 17 354 6.92e-16 78.6
Msa1200330 AT4G01450.4 25.391 256 151 3 13 247 8 244 4.71e-15 74.7
Msa1200330 AT5G64700.2 27.165 254 148 4 14 242 7 248 6.94e-15 74.3
Msa1200330 AT3G28100.3 33.094 139 80 2 77 215 97 222 1.05e-13 70.9
Msa1200330 AT3G28080.9 25.000 224 148 6 108 327 2 209 5.55e-13 68.2
Msa1200330 AT4G01450.3 25.000 232 134 3 13 223 8 220 7.17e-13 68.2
Msa1200330 AT3G28130.4 30.000 150 92 2 76 225 95 231 1.74e-12 67.4
Msa1200330 AT3G28100.2 34.711 121 72 1 77 190 97 217 9.83e-12 65.1
Msa1200330 AT4G16620.1 24.850 334 198 9 44 350 44 351 1.57e-11 65.5

Find 86 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTGTGCTCAGGATATT+TGG 0.169312 8_1:+52911966 Msa1200330:intron
AGGAATTCTTGTATGTGTTT+TGG 0.209877 8_1:+52912309 Msa1200330:CDS
GCAGGATACTTCTTTAATAT+TGG 0.251367 8_1:-52913941 None:intergenic
GTTGGGGTTCTGTGCTTAAT+AGG 0.260906 8_1:+52912487 Msa1200330:CDS
ACCAACATTAAGAGCCAATT+TGG 0.273714 8_1:-52910814 None:intergenic
TTCCTCATCATAGCTCTAAA+AGG 0.273925 8_1:+52916398 Msa1200330:CDS
ACAGCATATTCATACTTCTT+TGG 0.291308 8_1:+52913977 Msa1200330:CDS
TTATCATGTTATCACCAAAT+TGG 0.309087 8_1:+52910800 Msa1200330:CDS
ATTGCATCTGCCCTTAACTA+TGG 0.313466 8_1:+52915374 Msa1200330:CDS
GTTAGTGGTTTAATGAATCT+TGG 0.332062 8_1:+52912448 Msa1200330:CDS
CTTTATAATCCGCTTCAACC+TGG 0.334073 8_1:+52915443 Msa1200330:CDS
TTATTTCACTGTGTGATATA+AGG 0.359568 8_1:-52912390 None:intergenic
TTGGTCTGTACGCGGTTACT+TGG 0.370160 8_1:+52916338 Msa1200330:CDS
ATGTAATGATTCCATAGTTA+AGG 0.370346 8_1:-52915385 None:intergenic
ATCCTATATACACATATAAC+TGG 0.379566 8_1:+52916561 Msa1200330:three_prime_UTR
CATGATGACAACAGTGTCTT+AGG 0.379611 8_1:+52916298 Msa1200330:intron
TTTATAATCCGCTTCAACCT+GGG 0.386468 8_1:+52915444 Msa1200330:CDS
GAGGAGGGAATGGTGATATA+TGG 0.394855 8_1:+52910733 Msa1200330:CDS
TACATGGAGCAACAAGATCT+TGG 0.395024 8_1:+52915403 Msa1200330:CDS
CCATCTGGATGGTTAGTTAG+TGG 0.401291 8_1:+52912433 Msa1200330:CDS
ACAGAACCCCAACATGAAAA+TGG 0.403050 8_1:-52912477 None:intergenic
TTATAAAGGGCAACCATGGC+TGG 0.406595 8_1:-52915428 None:intergenic
GCTGTGACAGATAGGTTTGC+AGG 0.416358 8_1:-52913959 None:intergenic
GACAGGAGAGCAGCCGCCCC+AGG 0.425659 8_1:-52915461 None:intergenic
CAGGTTGAAGCGGATTATAA+AGG 0.433302 8_1:-52915442 None:intergenic
TATTGGAAGTCCGATTTACA+TGG 0.436691 8_1:+52915493 Msa1200330:CDS
AATGTAAAGACCGGAGTAGC+TGG 0.445921 8_1:-52912053 None:intergenic
ATGTACCTTCCCATGTAAAT+CGG 0.455392 8_1:-52915503 None:intergenic
AACCAGTTATATGTGTATAT+AGG 0.457786 8_1:-52916563 None:intergenic
ATGAATATGCTGTGACAGAT+AGG 0.458154 8_1:-52913967 None:intergenic
GTTGGAGTCGGAGGAGGGAA+TGG 0.458196 8_1:+52910723 Msa1200330:CDS
CTTGCTAAGATATGAAGGTC+TGG 0.466517 8_1:+52912276 Msa1200330:CDS
AGAGGTCAACCAGAGCCATC+TGG 0.467959 8_1:+52912418 Msa1200330:CDS
TGATATATGGAAAGCACATT+CGG 0.477060 8_1:+52910746 Msa1200330:CDS
ATGGGAGTTGGAGTCGGAGG+AGG 0.478644 8_1:+52910717 Msa1200330:CDS
GGTGGATCTCTAATCATCAT+TGG 0.480528 8_1:+52916319 Msa1200330:CDS
AGGTTGAAGCGGATTATAAA+GGG 0.485405 8_1:-52915441 None:intergenic
ACCAAATTGGCTCTTAATGT+TGG 0.489003 8_1:+52910813 Msa1200330:CDS
TGTAATGATTCCATAGTTAA+GGG 0.493958 8_1:-52915384 None:intergenic
ACATGGAGCAACAAGATCTT+GGG 0.500761 8_1:+52915404 Msa1200330:CDS
TGACCGATGAATCAACTGAT+TGG 0.503087 8_1:+52914032 Msa1200330:CDS
GTGAACTTGCTAAGATATGA+AGG 0.503183 8_1:+52912271 Msa1200330:CDS
TGGGAGTTGGAGTCGGAGGA+GGG 0.505550 8_1:+52910718 Msa1200330:CDS
TTTGTACCGTGGTCCAGCAC+TGG 0.506042 8_1:+52912348 Msa1200330:CDS
TCTGAATATCCTACCAGTGC+TGG 0.507673 8_1:-52912361 None:intergenic
GAAGGTCTGGCTAAGGTTGG+AGG 0.512188 8_1:+52912289 Msa1200330:CDS
TCCTCATCATAGCTCTAAAA+GGG 0.513226 8_1:+52916399 Msa1200330:CDS
TGGTCTGTACGCGGTTACTT+GGG 0.518945 8_1:+52916339 Msa1200330:CDS
ACTGAGAAAATGTTAACTCT+AGG 0.522894 8_1:-52916451 None:intergenic
TGAATTGCAGCAGCATAAGT+TGG 0.522951 8_1:-52912029 None:intergenic
GGCATCATATAGAGAAAGAC+AGG 0.523841 8_1:+52916360 Msa1200330:CDS
AATTCATTTCATCAATCCGA+TGG 0.525299 8_1:-52916487 None:intergenic
TGCAATTCAGCCAGCTACTC+CGG 0.528621 8_1:+52912043 Msa1200330:CDS
AGCACATTCGGCGATGGCAG+TGG 0.530212 8_1:+52910758 Msa1200330:CDS
AGAGAAAGACAGGCAGCTGC+CGG 0.532084 8_1:+52916370 Msa1200330:CDS
CAAGATCTTGGGCCCAGCCA+TGG 0.545098 8_1:+52915415 Msa1200330:CDS
TATGAAGGTCTGGCTAAGGT+TGG 0.555628 8_1:+52912286 Msa1200330:CDS
TTATAATCCGCTTCAACCTG+GGG 0.559165 8_1:+52915445 Msa1200330:CDS
CTTCTTTGGAGCTTTACTGA+TGG 0.559547 8_1:+52913991 Msa1200330:CDS
ACTGGTAGGATATTCAGAAA+TGG 0.564144 8_1:+52912366 Msa1200330:CDS
ACTCCAATCAGTTGATTCAT+CGG 0.565096 8_1:-52914035 None:intergenic
ACTAACCATCCAGATGGCTC+TGG 0.565423 8_1:-52912427 None:intergenic
AAGATATGAAGGTCTGGCTA+AGG 0.565630 8_1:+52912282 Msa1200330:CDS
GCAGTGGTTCAATTATTCAC+AGG 0.565872 8_1:+52910774 Msa1200330:CDS
TATAAAGGGCAACCATGGCT+GGG 0.577174 8_1:-52915427 None:intergenic
CGGATTATAAAGGGCAACCA+TGG 0.578298 8_1:-52915432 None:intergenic
GAAGTCCGATTTACATGGGA+AGG 0.580552 8_1:+52915498 Msa1200330:CDS
CACAGTGAAATAACTGCAAG+AGG 0.583694 8_1:+52912400 Msa1200330:CDS
ATGGAAAGCACATTCGGCGA+TGG 0.587206 8_1:+52910752 Msa1200330:CDS
TAATCCGCTTCAACCTGGGG+CGG 0.591806 8_1:+52915448 Msa1200330:CDS
GCAGCCGCCCCAGGTTGAAG+CGG 0.592329 8_1:-52915452 None:intergenic
AATAGGAAACTGCATGTGCA+TGG 0.596217 8_1:+52912504 Msa1200330:CDS
CCACTAACTAACCATCCAGA+TGG 0.597835 8_1:-52912433 None:intergenic
AGTCTTATCTACAAAGCCAT+CGG 0.598008 8_1:+52916471 Msa1200330:CDS
GTGGTTCAATTATTCACAGG+AGG 0.604087 8_1:+52910777 Msa1200330:CDS
GATGACAACAGTGTCTTAGG+TGG 0.607908 8_1:+52916301 Msa1200330:intron
TTAACTATGGAATCATTACA+TGG 0.617990 8_1:+52915387 Msa1200330:CDS
TTGATGAAATGAATTGTGAA+AGG 0.621897 8_1:+52916495 Msa1200330:exon
ATTGGAAGTCCGATTTACAT+GGG 0.628732 8_1:+52915494 Msa1200330:CDS
GTCAACCAGAGCCATCTGGA+TGG 0.657589 8_1:+52912422 Msa1200330:CDS
ATCCTACCAGTGCTGGACCA+CGG 0.660089 8_1:-52912354 None:intergenic
ATAATGGGAGTTGGAGTCGG+AGG 0.662402 8_1:+52910714 Msa1200330:exon
GCTATGATGAGGAATAACTC+CGG 0.677307 8_1:-52916389 None:intergenic
AATCATCATTGGTCTGTACG+CGG 0.688883 8_1:+52916330 Msa1200330:CDS
GATATATTACAAATTCGACA+AGG 0.726660 8_1:+52916628 Msa1200330:three_prime_UTR
ACGGTACAAAACCATCACCA+AGG 0.737736 8_1:-52912335 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTCAATATTTAATTAATTA+AGG + chr8_1:52911020-52911039 Msa1200330:intron 10.0%
!! TCAATTATATTTCAAAATAT+AGG - chr8_1:52912922-52912941 None:intergenic 10.0%
!!! ATAGATTTTCAAAAATATTA+AGG - chr8_1:52913852-52913871 None:intergenic 10.0%
!!! TTAATATTTTTGAAAATCTA+TGG + chr8_1:52913851-52913870 Msa1200330:intron 10.0%
!! TATTTAATTAATTAAGGGTT+AGG + chr8_1:52911026-52911045 Msa1200330:intron 15.0%
!!! TTTTTACGTTTTTTTTTTAC+TGG - chr8_1:52911359-52911378 None:intergenic 15.0%
!! GTAATAAACAATCATTTAAA+GGG - chr8_1:52912567-52912586 None:intergenic 15.0%
!! TGTAATAAACAATCATTTAA+AGG - chr8_1:52912568-52912587 None:intergenic 15.0%
!! ATACTCAAAATTTATAGTAA+TGG + chr8_1:52913344-52913363 Msa1200330:intron 15.0%
!!! TTATGTTTAATTTATCATCA+TGG + chr8_1:52913904-52913923 Msa1200330:intron 15.0%
!!! ATTTTTTTGTGTTTTTGTAA+TGG + chr8_1:52914217-52914236 Msa1200330:intron 15.0%
!! AAAGTTAAAAGACAAAATTA+AGG - chr8_1:52914349-52914368 None:intergenic 15.0%
!!! TTAATTTTGTCTTTTAACTT+TGG + chr8_1:52914348-52914367 Msa1200330:intron 15.0%
!!! TAATTTTGTCTTTTAACTTT+GGG + chr8_1:52914349-52914368 Msa1200330:intron 15.0%
!! AATAAGAGAGAAAAAAATTA+TGG - chr8_1:52916538-52916557 None:intergenic 15.0%
!! AAAAATACTTGAAAAGAATT+TGG + chr8_1:52916667-52916686 Msa1200330:three_prime_UTR 15.0%
!! ATTTGTATAATCTGTGTTTA+GGG + chr8_1:52910950-52910969 Msa1200330:intron 20.0%
!!! AATCATCTTTTGTTTCTTAT+TGG + chr8_1:52911990-52912009 Msa1200330:CDS 20.0%
!! ATTTAATTAATGTGCAGATT+TGG - chr8_1:52912187-52912206 None:intergenic 20.0%
!! ATCAAATGTGTATAATACAT+GGG - chr8_1:52912672-52912691 None:intergenic 20.0%
!!! AGAAAAAAAAACAGGTTTTT+TGG + chr8_1:52913289-52913308 Msa1200330:intron 20.0%
!! TTAGTATAAATATAGAGACA+GGG + chr8_1:52913604-52913623 Msa1200330:intron 20.0%
!!! TTTATGCAATTTTCTATATG+TGG + chr8_1:52914531-52914550 Msa1200330:intron 20.0%
!! CTATAAATTTATTACTTCGA+AGG + chr8_1:52915299-52915318 Msa1200330:intron 20.0%
!! CTAATTTCATCTCATATATA+AGG - chr8_1:52915664-52915683 None:intergenic 20.0%
!! TTAAGAATATCACTAGAAAA+AGG - chr8_1:52915903-52915922 None:intergenic 20.0%
!! AATAATGATGTGTAAGTTAT+TGG - chr8_1:52915960-52915979 None:intergenic 20.0%
!!! AATTGAAACTCTAATTTTGT+AGG + chr8_1:52916606-52916625 Msa1200330:three_prime_UTR 20.0%
! TTATCATGTTATCACCAAAT+TGG + chr8_1:52910800-52910819 Msa1200330:CDS 25.0%
! CTAAACACAGATTATACAAA+TGG - chr8_1:52910951-52910970 None:intergenic 25.0%
! CATTTGTATAATCTGTGTTT+AGG + chr8_1:52910949-52910968 Msa1200330:intron 25.0%
! AAATAGCAGCTGTATATAAA+CGG - chr8_1:52911535-52911554 None:intergenic 25.0%
!!! ATTTTTGTTGGCTATAATGA+TGG + chr8_1:52912073-52912092 Msa1200330:CDS 25.0%
!!! TTTTTGTTGGCTATAATGAT+GGG + chr8_1:52912074-52912093 Msa1200330:CDS 25.0%
!!! GTGAATGCATTTTTTTTTTG+TGG + chr8_1:52912135-52912154 Msa1200330:intron 25.0%
! TTACACATTATCATATGTTC+TGG - chr8_1:52912219-52912238 None:intergenic 25.0%
! TTATTTCACTGTGTGATATA+AGG - chr8_1:52912393-52912412 None:intergenic 25.0%
! TAAAAAGATATGTACCTGAA+TGG - chr8_1:52912542-52912561 None:intergenic 25.0%
!!! TTTTTTGCCTTAACTTAATG+CGG - chr8_1:52912592-52912611 None:intergenic 25.0%
! CATCAAATGTGTATAATACA+TGG - chr8_1:52912673-52912692 None:intergenic 25.0%
! CAATAACATTCTTTCTCTTT+AGG - chr8_1:52913260-52913279 None:intergenic 25.0%
! TTTGCTGAAGAAAAAAAAAC+AGG + chr8_1:52913281-52913300 Msa1200330:intron 25.0%
! AATCAGCATCATAAAAGAAA+TGG - chr8_1:52913376-52913395 None:intergenic 25.0%
!! ATTTCTTTTATGATGCTGAT+TGG + chr8_1:52913375-52913394 Msa1200330:intron 25.0%
! AACCATTAGTTAAGTGTTAT+TGG + chr8_1:52913546-52913565 Msa1200330:intron 25.0%
!! ACCATTAGTTAAGTGTTATT+GGG + chr8_1:52913547-52913566 Msa1200330:intron 25.0%
! TAAGAAATAAAGCACAATAC+AGG - chr8_1:52913587-52913606 None:intergenic 25.0%
! CTTAGTATAAATATAGAGAC+AGG + chr8_1:52913603-52913622 Msa1200330:intron 25.0%
!!! AAAATATCGCTTTATTTGGA+TGG - chr8_1:52913708-52913727 None:intergenic 25.0%
!! GTGTAAAATATCGCTTTATT+TGG - chr8_1:52913712-52913731 None:intergenic 25.0%
! TACACATATTGATGTCTTAT+TGG + chr8_1:52913727-52913746 Msa1200330:intron 25.0%
! AAAACAAAAATGACAACCTT+TGG - chr8_1:52913760-52913779 None:intergenic 25.0%
! TTGAAAATCTATGGTGATAT+TGG + chr8_1:52913860-52913879 Msa1200330:intron 25.0%
! TGAAAATCTATGGTGATATT+GGG + chr8_1:52913861-52913880 Msa1200330:intron 25.0%
!!! TATCATCATGGATTATTTTC+AGG + chr8_1:52913916-52913935 Msa1200330:intron 25.0%
! ATTAGCAATATAACCAACAA+TGG - chr8_1:52914138-52914157 None:intergenic 25.0%
!! GGTTATATTGCTAATCATTT+TGG + chr8_1:52914143-52914162 Msa1200330:intron 25.0%
! CAAACAATGAATAAGGAAAA+TGG - chr8_1:52914170-52914189 None:intergenic 25.0%
! AAAGCAACAAACAATGAATA+AGG - chr8_1:52914177-52914196 None:intergenic 25.0%
! AAGGAAAGCTTATAAAAAAG+TGG - chr8_1:52914330-52914349 None:intergenic 25.0%
! AACATATAGTTAACAAGTAG+CGG - chr8_1:52914408-52914427 None:intergenic 25.0%
! GATTAAATAATGCCATAATG+GGG - chr8_1:52914466-52914485 None:intergenic 25.0%
! GGATTAAATAATGCCATAAT+GGG - chr8_1:52914467-52914486 None:intergenic 25.0%
! TGGATTAAATAATGCCATAA+TGG - chr8_1:52914468-52914487 None:intergenic 25.0%
!!! TATTTGATTTGCTCACTTAT+AGG + chr8_1:52914576-52914595 Msa1200330:intron 25.0%
!!! AAATGCTTTACAAAAGCATT+TGG - chr8_1:52914646-52914665 None:intergenic 25.0%
!!! TTTTTTTTCTCACTCTTGTA+TGG - chr8_1:52914929-52914948 None:intergenic 25.0%
! GCAAATTTCATCAACATTTA+TGG - chr8_1:52914979-52914998 None:intergenic 25.0%
! ATGTCTTTCTTCTTTATTCA+GGG + chr8_1:52915347-52915366 Msa1200330:intron 25.0%
! TGTAATGATTCCATAGTTAA+GGG - chr8_1:52915387-52915406 None:intergenic 25.0%
! ATGTAATGATTCCATAGTTA+AGG - chr8_1:52915388-52915407 None:intergenic 25.0%
! TTAACTATGGAATCATTACA+TGG + chr8_1:52915387-52915406 Msa1200330:CDS 25.0%
! TTCCAATAAAAATTCTAGAC+AGG - chr8_1:52915481-52915500 None:intergenic 25.0%
!!! TCAAAATCTCTTTTTTCTGT+TGG - chr8_1:52915601-52915620 None:intergenic 25.0%
! TTGATGAAATGAATTGTGAA+AGG + chr8_1:52916495-52916514 Msa1200330:exon 25.0%
! ATCCTATATACACATATAAC+TGG + chr8_1:52916561-52916580 Msa1200330:three_prime_UTR 25.0%
! AACCAGTTATATGTGTATAT+AGG - chr8_1:52916566-52916585 None:intergenic 25.0%
! GATATATTACAAATTCGACA+AGG + chr8_1:52916628-52916647 Msa1200330:three_prime_UTR 25.0%
!!! TCTTTTCAAGTATTTTTCAC+AGG - chr8_1:52916664-52916683 None:intergenic 25.0%
! TGATATATGGAAAGCACATT+CGG + chr8_1:52910746-52910765 Msa1200330:CDS 30.0%
TATACAAATGGCAACAAAAC+AGG - chr8_1:52910939-52910958 None:intergenic 30.0%
GATGATACGAACAAACATAA+GGG - chr8_1:52911001-52911020 None:intergenic 30.0%
AGATGATACGAACAAACATA+AGG - chr8_1:52911002-52911021 None:intergenic 30.0%
AATTAAGGGTTAGGTTATAG+TGG + chr8_1:52911035-52911054 Msa1200330:intron 30.0%
TTGTCAAATATCTGCTATTG+TGG - chr8_1:52911245-52911264 None:intergenic 30.0%
ATACTAAAGAAAAACCTGTG+TGG + chr8_1:52911378-52911397 Msa1200330:intron 30.0%
!!! ACTGCTTCCACTTATTTTTA+AGG - chr8_1:52911414-52911433 None:intergenic 30.0%
TAAAAATAAGTGGAAGCAGT+TGG + chr8_1:52911414-52911433 Msa1200330:intron 30.0%
!! GTTATAGTCTACTTTTAGTG+TGG + chr8_1:52911442-52911461 Msa1200330:intron 30.0%
TTCCACAACTTAAATCATGT+TGG - chr8_1:52911475-52911494 None:intergenic 30.0%
AATAGCAGCTGTATATAAAC+GGG - chr8_1:52911534-52911553 None:intergenic 30.0%
! GTCATAGTTTGCAATTATGA+AGG + chr8_1:52911616-52911635 Msa1200330:intron 30.0%
! ATAGTTTGCAATTATGAAGG+TGG + chr8_1:52911619-52911638 Msa1200330:intron 30.0%
!!! GTGGATGCTAATTTTGTTTT+CGG + chr8_1:52911638-52911657 Msa1200330:intron 30.0%
!!! TGGATGCTAATTTTGTTTTC+GGG + chr8_1:52911639-52911658 Msa1200330:intron 30.0%
CAATACAACATGGCATTATT+AGG - chr8_1:52911788-52911807 None:intergenic 30.0%
!! GTGACATCATTTTTCTTTCT+CGG + chr8_1:52911846-52911865 Msa1200330:intron 30.0%
ATGCTATCTTATTGATGCAT+TGG + chr8_1:52911931-52911950 Msa1200330:intron 30.0%
TTATTTGTGCTCAGGATATT+TGG + chr8_1:52911966-52911985 Msa1200330:intron 30.0%
!! TTTTGTTGGCTATAATGATG+GGG + chr8_1:52912075-52912094 Msa1200330:CDS 30.0%
! AGGAATTCTTGTATGTGTTT+TGG + chr8_1:52912309-52912328 Msa1200330:CDS 30.0%
! GGAATTCTTGTATGTGTTTT+GGG + chr8_1:52912310-52912329 Msa1200330:CDS 30.0%
! GAATTCTTGTATGTGTTTTG+GGG + chr8_1:52912311-52912330 Msa1200330:CDS 30.0%
!! AATTCTTGTATGTGTTTTGG+GGG + chr8_1:52912312-52912331 Msa1200330:CDS 30.0%
GTTAGTGGTTTAATGAATCT+TGG + chr8_1:52912448-52912467 Msa1200330:CDS 30.0%
! GATTAGACCATTTTCATGTT+GGG + chr8_1:52912470-52912489 Msa1200330:CDS 30.0%
! ATTAGACCATTTTCATGTTG+GGG + chr8_1:52912471-52912490 Msa1200330:CDS 30.0%
! TCCGTTACTTATTTGTTAAG+CGG + chr8_1:52912633-52912652 Msa1200330:intron 30.0%
!! GATTAGGTTGATGTGAAAAT+TGG - chr8_1:52912789-52912808 None:intergenic 30.0%
! ACTAAGGGTATGTTTAGATA+AGG - chr8_1:52913078-52913097 None:intergenic 30.0%
TGATTCTAATCTCATTGTTC+CGG - chr8_1:52913150-52913169 None:intergenic 30.0%
TAGGCACTTAAGTATAAAGT+TGG - chr8_1:52913475-52913494 None:intergenic 30.0%
AAATAAAGCACAATACAGGA+GGG - chr8_1:52913583-52913602 None:intergenic 30.0%
TTTATTTGGATGGAGATGAA+CGG - chr8_1:52913698-52913717 None:intergenic 30.0%
GAAAATCTATGGTGATATTG+GGG + chr8_1:52913862-52913881 Msa1200330:intron 30.0%
GCAGGATACTTCTTTAATAT+TGG - chr8_1:52913944-52913963 None:intergenic 30.0%
ACAGCATATTCATACTTCTT+TGG + chr8_1:52913977-52913996 Msa1200330:CDS 30.0%
!! AACATTGACTCCTAAAAAGA+TGG - chr8_1:52914246-52914265 None:intergenic 30.0%
ACTTGGATCACTATGAAAAA+AGG - chr8_1:52914281-52914300 None:intergenic 30.0%
!! CACTTTTCTGTTTTTCTAAC+CGG - chr8_1:52914441-52914460 None:intergenic 30.0%
TTATTTAATCCATTCCCACT+TGG + chr8_1:52914476-52914495 Msa1200330:intron 30.0%
ATTTGCTCACTTATAGGTAT+TGG + chr8_1:52914582-52914601 Msa1200330:intron 30.0%
!! TAGTATTAAAAGTGTTCGAG+AGG - chr8_1:52914672-52914691 None:intergenic 30.0%
AGTCTTGGCATTATAATGAT+TGG + chr8_1:52914790-52914809 Msa1200330:intron 30.0%
GTCTTGGCATTATAATGATT+GGG + chr8_1:52914791-52914810 Msa1200330:intron 30.0%
! AGCAGCGTAATTTTGTAATT+TGG + chr8_1:52914866-52914885 Msa1200330:intron 30.0%
! GCAGCGTAATTTTGTAATTT+GGG + chr8_1:52914867-52914886 Msa1200330:intron 30.0%
! GTTGATGAAATTTGCATGTT+AGG + chr8_1:52914984-52915003 Msa1200330:intron 30.0%
! CTTTTGAGCATGAAAAGAAT+TGG + chr8_1:52915014-52915033 Msa1200330:intron 30.0%
GACATGTTTAAGAAACAACA+TGG - chr8_1:52915332-52915351 None:intergenic 30.0%
CATGTCTTTCTTCTTTATTC+AGG + chr8_1:52915346-52915365 Msa1200330:intron 30.0%
!! CTCCTGTCTAGAATTTTTAT+TGG + chr8_1:52915476-52915495 Msa1200330:CDS 30.0%
ACAACAATGCATCAATAAGT+GGG - chr8_1:52915543-52915562 None:intergenic 30.0%
ACCATTAACAAAGTGACAAT+AGG - chr8_1:52915771-52915790 None:intergenic 30.0%
!! TATTGTCACTTTGTTAATGG+TGG + chr8_1:52915770-52915789 Msa1200330:intron 30.0%
CCTCTGGATGTTAAAAAAAT+AGG - chr8_1:52916091-52916110 None:intergenic 30.0%
!!! CCTATTTTTTTAACATCCAG+AGG + chr8_1:52916088-52916107 Msa1200330:intron 30.0%
AAAATTATTTCAGTCACCTC+TGG - chr8_1:52916107-52916126 None:intergenic 30.0%
!! AAGTTTTGTGAAGAGATTCA+GGG - chr8_1:52916426-52916445 None:intergenic 30.0%
ACTGAGAAAATGTTAACTCT+AGG - chr8_1:52916454-52916473 None:intergenic 30.0%
AATTCATTTCATCAATCCGA+TGG - chr8_1:52916490-52916509 None:intergenic 30.0%
! ACCAAATTGGCTCTTAATGT+TGG + chr8_1:52910813-52910832 Msa1200330:CDS 35.0%
ACCAACATTAAGAGCCAATT+TGG - chr8_1:52910817-52910836 None:intergenic 35.0%
CTTTCACGAAAAAAAGCGAT+GGG - chr8_1:52910897-52910916 None:intergenic 35.0%
GCTCTAACACTATTGAATAG+TGG - chr8_1:52911073-52911092 None:intergenic 35.0%
TTCCCTTAAATAATGTACCC+CGG + chr8_1:52911269-52911288 Msa1200330:intron 35.0%
TTCCGGGGTACATTATTTAA+GGG - chr8_1:52911274-52911293 None:intergenic 35.0%
ACTAAACTGCTATAGTGTAG+CGG - chr8_1:52911318-52911337 None:intergenic 35.0%
! TACTGGAGCATTATCTATAG+CGG - chr8_1:52911342-52911361 None:intergenic 35.0%
TAAAGAAAAACCTGTGTGGA+AGG + chr8_1:52911382-52911401 Msa1200330:intron 35.0%
AAAGAAAAACCTGTGTGGAA+GGG + chr8_1:52911383-52911402 Msa1200330:intron 35.0%
!! GACCAACATGATTTAAGTTG+TGG + chr8_1:52911470-52911489 Msa1200330:intron 35.0%
ATCATCTCAAGTTTGATCCT+AGG + chr8_1:52911572-52911591 Msa1200330:intron 35.0%
TCATCTCAAGTTTGATCCTA+GGG + chr8_1:52911573-52911592 Msa1200330:intron 35.0%
AAGTTAAATGTACACAACGC+CGG - chr8_1:52911665-52911684 None:intergenic 35.0%
AAAGTGCAGATGACAAGATT+AGG - chr8_1:52911747-52911766 None:intergenic 35.0%
CGTCTACATACAATACAACA+TGG - chr8_1:52911798-52911817 None:intergenic 35.0%
GTATTGTATGTAGACGTACA+CGG + chr8_1:52911802-52911821 Msa1200330:intron 35.0%
AAATGATGTCACTAAGCTCT+TGG - chr8_1:52911838-52911857 None:intergenic 35.0%
! TTTTTCTTTCTCGGACTAAC+TGG + chr8_1:52911855-52911874 Msa1200330:intron 35.0%
! TTTTCTTTCTCGGACTAACT+GGG + chr8_1:52911856-52911875 Msa1200330:intron 35.0%
! TCCGGTCTTTACATTTTTGT+TGG + chr8_1:52912061-52912080 Msa1200330:CDS 35.0%
GCCAACAAAAATGTAAAGAC+CGG - chr8_1:52912065-52912084 None:intergenic 35.0%
!! GTGAACTTGCTAAGATATGA+AGG + chr8_1:52912271-52912290 Msa1200330:CDS 35.0%
ACTGGTAGGATATTCAGAAA+TGG + chr8_1:52912366-52912385 Msa1200330:CDS 35.0%
! GGATTAGACCATTTTCATGT+TGG + chr8_1:52912469-52912488 Msa1200330:CDS 35.0%
ATTACAGCCGCATTAAGTTA+AGG + chr8_1:52912582-52912601 Msa1200330:intron 35.0%
GCCGCTTAACAAATAAGTAA+CGG - chr8_1:52912637-52912656 None:intergenic 35.0%
TGTATAATACATGGGAGTTG+GGG - chr8_1:52912664-52912683 None:intergenic 35.0%
GTGTATAATACATGGGAGTT+GGG - chr8_1:52912665-52912684 None:intergenic 35.0%
TGTGTATAATACATGGGAGT+TGG - chr8_1:52912666-52912685 None:intergenic 35.0%
TACAAGAGTCATAGTTGTCT+GGG + chr8_1:52912695-52912714 Msa1200330:intron 35.0%
TTGATGTGAAAATTGGACCA+AGG - chr8_1:52912782-52912801 None:intergenic 35.0%
! TGCAGTCTTGTATTCATTTC+TGG - chr8_1:52912833-52912852 None:intergenic 35.0%
!! TGCACCAATTTTGATCACTT+AGG + chr8_1:52912849-52912868 Msa1200330:intron 35.0%
!! GCACCAATTTTGATCACTTA+GGG + chr8_1:52912850-52912869 Msa1200330:intron 35.0%
AGACCCTAAGTGATCAAAAT+TGG - chr8_1:52912856-52912875 None:intergenic 35.0%
TGTTTAGATAAGGAGGGAAA+GGG - chr8_1:52913068-52913087 None:intergenic 35.0%
ATGTTTAGATAAGGAGGGAA+AGG - chr8_1:52913069-52913088 None:intergenic 35.0%
AGGGTATGTTTAGATAAGGA+GGG - chr8_1:52913074-52913093 None:intergenic 35.0%
! AAGGGTATGTTTAGATAAGG+AGG - chr8_1:52913075-52913094 None:intergenic 35.0%
! AAAGCATTCGAAAGGACTAA+GGG - chr8_1:52913093-52913112 None:intergenic 35.0%
CAGCATCATAAAAGAAATGG+AGG - chr8_1:52913373-52913392 None:intergenic 35.0%
ACAAGAACAGTAACCATAAG+TGG - chr8_1:52913425-52913444 None:intergenic 35.0%
CTTATGGTTACTGTTCTTGT+TGG + chr8_1:52913425-52913444 Msa1200330:intron 35.0%
AAATATATGTCCCAGCTTGA+GGG + chr8_1:52913510-52913529 Msa1200330:intron 35.0%
GCCCAATAACACTTAACTAA+TGG - chr8_1:52913551-52913570 None:intergenic 35.0%
! TAGTTAAGTGTTATTGGGCT+AGG + chr8_1:52913552-52913571 Msa1200330:intron 35.0%
GAAATAAAGCACAATACAGG+AGG - chr8_1:52913584-52913603 None:intergenic 35.0%
ACAAAAATGACAACCTTTGG+AGG - chr8_1:52913757-52913776 None:intergenic 35.0%
ATGAATATGCTGTGACAGAT+AGG - chr8_1:52913970-52913989 None:intergenic 35.0%
! ACTCCAATCAGTTGATTCAT+CGG - chr8_1:52914038-52914057 None:intergenic 35.0%
! TGAAGGTTGATTGGAAATTC+TGG - chr8_1:52914105-52914124 None:intergenic 35.0%
! TCATGACATTGAAGGTTGAT+TGG - chr8_1:52914114-52914133 None:intergenic 35.0%
!! GTAATGGAAGCCATCTTTTT+AGG + chr8_1:52914233-52914252 Msa1200330:intron 35.0%
TGGATCACTATGAAAAAAGG+TGG - chr8_1:52914278-52914297 None:intergenic 35.0%
TTTCCTCACTTGCAAAAACT+TGG - chr8_1:52914298-52914317 None:intergenic 35.0%
!! TTTTCTGTTTTTCTAACCGG+TGG - chr8_1:52914438-52914457 None:intergenic 35.0%
ACATGACATGACATATCACT+TGG - chr8_1:52914699-52914718 None:intergenic 35.0%
! TTATTGAAAATGTCGACTGC+AGG + chr8_1:52915201-52915220 Msa1200330:intron 35.0%
TACTTGCACTCTTACACAAA+TGG - chr8_1:52915233-52915252 None:intergenic 35.0%
!!! TCCTAGATTTTAGAACTCAG+TGG + chr8_1:52915261-52915280 Msa1200330:intron 35.0%
!! ACCACTGAGTTCTAAAATCT+AGG - chr8_1:52915265-52915284 None:intergenic 35.0%
!! AGGTTGAAGCGGATTATAAA+GGG - chr8_1:52915444-52915463 None:intergenic 35.0%
TTTATAATCCGCTTCAACCT+GGG + chr8_1:52915444-52915463 Msa1200330:CDS 35.0%
TATTGGAAGTCCGATTTACA+TGG + chr8_1:52915493-52915512 Msa1200330:CDS 35.0%
ATTGGAAGTCCGATTTACAT+GGG + chr8_1:52915494-52915513 Msa1200330:CDS 35.0%
ATGTACCTTCCCATGTAAAT+CGG - chr8_1:52915506-52915525 None:intergenic 35.0%
GACAACAATGCATCAATAAG+TGG - chr8_1:52915544-52915563 None:intergenic 35.0%
! TTTTCTGTTGGTACCTATTG+AGG - chr8_1:52915589-52915608 None:intergenic 35.0%
!! GCCTATTGTCACTTTGTTAA+TGG + chr8_1:52915767-52915786 Msa1200330:intron 35.0%
TCACTAGAAAAAGGAAAGCA+GGG - chr8_1:52915894-52915913 None:intergenic 35.0%
ATCACTAGAAAAAGGAAAGC+AGG - chr8_1:52915895-52915914 None:intergenic 35.0%
TTTACACAAGTTATGCATGC+AGG - chr8_1:52916046-52916065 None:intergenic 35.0%
TTGAATGTAAACACGTGCAT+TGG - chr8_1:52916170-52916189 None:intergenic 35.0%
TATTATTAGTGTCTGCGTGT+CGG + chr8_1:52916210-52916229 Msa1200330:intron 35.0%
!! TTCCTCATCATAGCTCTAAA+AGG + chr8_1:52916398-52916417 Msa1200330:CDS 35.0%
!! TCCTCATCATAGCTCTAAAA+GGG + chr8_1:52916399-52916418 Msa1200330:CDS 35.0%
!! GAAGTTTTGTGAAGAGATTC+AGG - chr8_1:52916427-52916446 None:intergenic 35.0%
! AGTCTTATCTACAAAGCCAT+CGG + chr8_1:52916471-52916490 Msa1200330:CDS 35.0%
GCAGTGGTTCAATTATTCAC+AGG + chr8_1:52910774-52910793 Msa1200330:CDS 40.0%
GTGGTTCAATTATTCACAGG+AGG + chr8_1:52910777-52910796 Msa1200330:CDS 40.0%
CCTTTCACGAAAAAAAGCGA+TGG - chr8_1:52910898-52910917 None:intergenic 40.0%
!!! CCATCGCTTTTTTTCGTGAA+AGG + chr8_1:52910895-52910914 Msa1200330:CDS 40.0%
!! TAGTGTTAGAGCGCCAATTT+TGG + chr8_1:52911081-52911100 Msa1200330:intron 40.0%
!! ATGGACTAGCACACCAAAAT+TGG - chr8_1:52911097-52911116 None:intergenic 40.0%
ATTGGATCCCTCAGATTAGT+CGG + chr8_1:52911167-52911186 Msa1200330:intron 40.0%
AAAACTTTGCATCCAGTCCA+AGG - chr8_1:52911194-52911213 None:intergenic 40.0%
GTTCCGGGGTACATTATTTA+AGG - chr8_1:52911275-52911294 None:intergenic 40.0%
! TGCTATAGTGTAGCGGAATT+TGG - chr8_1:52911311-52911330 None:intergenic 40.0%
GGTACGGCCTTAAAAATAAG+TGG + chr8_1:52911404-52911423 Msa1200330:intron 40.0%
AAATAAGTGGAAGCAGTTGG+CGG + chr8_1:52911417-52911436 Msa1200330:intron 40.0%
GCAATAAAAAGAGCAACCCT+AGG - chr8_1:52911592-52911611 None:intergenic 40.0%
!!! TGCTAATTTTGTTTTCGGGC+CGG + chr8_1:52911643-52911662 Msa1200330:intron 40.0%
TGTCACTAAGCTCTTGGTTA+GGG - chr8_1:52911832-52911851 None:intergenic 40.0%
ATGTCACTAAGCTCTTGGTT+AGG - chr8_1:52911833-52911852 None:intergenic 40.0%
TTGCTTCGTTATTTGTGCTC+AGG + chr8_1:52911958-52911977 Msa1200330:intron 40.0%
TGAATTGCAGCAGCATAAGT+TGG - chr8_1:52912032-52912051 None:intergenic 40.0%
CTTGCTAAGATATGAAGGTC+TGG + chr8_1:52912276-52912295 Msa1200330:CDS 40.0%
AAGATATGAAGGTCTGGCTA+AGG + chr8_1:52912282-52912301 Msa1200330:CDS 40.0%
CACAGTGAAATAACTGCAAG+AGG + chr8_1:52912400-52912419 Msa1200330:CDS 40.0%
ACAGAACCCCAACATGAAAA+TGG - chr8_1:52912480-52912499 None:intergenic 40.0%
AATAGGAAACTGCATGTGCA+TGG + chr8_1:52912504-52912523 Msa1200330:CDS 40.0%
!!! GGCTACTTTTCTATCCATTC+AGG + chr8_1:52912525-52912544 Msa1200330:CDS 40.0%
CTACAAGAGTCATAGTTGTC+TGG + chr8_1:52912694-52912713 Msa1200330:intron 40.0%
TTGATCACTTAGGGTCTGTT+TGG + chr8_1:52912859-52912878 Msa1200330:intron 40.0%
TGATCACTTAGGGTCTGTTT+GGG + chr8_1:52912860-52912879 Msa1200330:intron 40.0%
!! GAAAGCATTCGAAAGGACTA+AGG - chr8_1:52913094-52913113 None:intergenic 40.0%
!! GTGACTTGAAAGCATTCGAA+AGG - chr8_1:52913101-52913120 None:intergenic 40.0%
! TCGAATGCTTTCAAGTCACA+AGG + chr8_1:52913102-52913121 Msa1200330:intron 40.0%
! AATGCTTTCAAGTCACAAGG+TGG + chr8_1:52913105-52913124 Msa1200330:intron 40.0%
ATGCACCTTTCATGTAGAAC+CGG + chr8_1:52913128-52913147 Msa1200330:intron 40.0%
TTGTTCCGGTTCTACATGAA+AGG - chr8_1:52913136-52913155 None:intergenic 40.0%
TGCTCTCTTACTCTCATTCT+TGG - chr8_1:52913228-52913247 None:intergenic 40.0%
ATGGTTACTGTTCTTGTTGG+AGG + chr8_1:52913428-52913447 Msa1200330:intron 40.0%
GTTGGAATATAATCCCCTCA+AGG - chr8_1:52913457-52913476 None:intergenic 40.0%
TACTTAAGTGCCTAATGACC+AGG + chr8_1:52913481-52913500 Msa1200330:intron 40.0%
ATTTCCAATGCCTGGTCATT+AGG - chr8_1:52913494-52913513 None:intergenic 40.0%
GGACATATATTTCCAATGCC+TGG - chr8_1:52913502-52913521 None:intergenic 40.0%
GAAATATATGTCCCAGCTTG+AGG + chr8_1:52913509-52913528 Msa1200330:intron 40.0%
AATATATGTCCCAGCTTGAG+GGG + chr8_1:52913511-52913530 Msa1200330:intron 40.0%
TCTTATTGGATGACCTCCAA+AGG + chr8_1:52913741-52913760 Msa1200330:intron 40.0%
!! CTTCTTTGGAGCTTTACTGA+TGG + chr8_1:52913991-52914010 Msa1200330:CDS 40.0%
TGACCGATGAATCAACTGAT+TGG + chr8_1:52914032-52914051 Msa1200330:CDS 40.0%
ACAATGGCTCATGACATTGA+AGG - chr8_1:52914122-52914141 None:intergenic 40.0%
TCAATGTCATGAGCCATTGT+TGG + chr8_1:52914122-52914141 Msa1200330:intron 40.0%
! GATCCAAGTTTTTGCAAGTG+AGG + chr8_1:52914292-52914311 Msa1200330:intron 40.0%
CAGAAAAGTGAACCCCATTA+TGG + chr8_1:52914451-52914470 Msa1200330:intron 40.0%
TTAATCCATTCCCACTTGGT+CGG + chr8_1:52914480-52914499 Msa1200330:intron 40.0%
!! AAAGCTTTTTCCGACCAAGT+GGG - chr8_1:52914493-52914512 None:intergenic 40.0%
GTGACAAATAATGCCAAGAC+TGG - chr8_1:52914760-52914779 None:intergenic 40.0%
! AATGCCAAGACTAGTTGCTT+AGG - chr8_1:52914782-52914801 None:intergenic 40.0%
AATGTTGCATTCACTCCAGT+CGG + chr8_1:52915060-52915079 Msa1200330:intron 40.0%
ATAATCGAGATCTCAGCTGT+AGG - chr8_1:52915185-52915204 None:intergenic 40.0%
ATTGCATCTGCCCTTAACTA+TGG + chr8_1:52915374-52915393 Msa1200330:CDS 40.0%
TACATGGAGCAACAAGATCT+TGG + chr8_1:52915403-52915422 Msa1200330:CDS 40.0%
ACATGGAGCAACAAGATCTT+GGG + chr8_1:52915404-52915423 Msa1200330:CDS 40.0%
!! CAGGTTGAAGCGGATTATAA+AGG - chr8_1:52915445-52915464 None:intergenic 40.0%
CTTTATAATCCGCTTCAACC+TGG + chr8_1:52915443-52915462 Msa1200330:CDS 40.0%
TTATAATCCGCTTCAACCTG+GGG + chr8_1:52915445-52915464 Msa1200330:CDS 40.0%
! TTTTCGACGAACTCCTCAAT+AGG + chr8_1:52915573-52915592 Msa1200330:intron 40.0%
CACTAGAAAAAGGAAAGCAG+GGG - chr8_1:52915893-52915912 None:intergenic 40.0%
! GTAAACACGTGCATTGGTAT+CGG - chr8_1:52916164-52916183 None:intergenic 40.0%
CTAAGACACTGTTGTCATCA+TGG - chr8_1:52916300-52916319 None:intergenic 40.0%
CATGATGACAACAGTGTCTT+AGG + chr8_1:52916298-52916317 Msa1200330:intron 40.0%
GGTGGATCTCTAATCATCAT+TGG + chr8_1:52916319-52916338 Msa1200330:CDS 40.0%
! AATCATCATTGGTCTGTACG+CGG + chr8_1:52916330-52916349 Msa1200330:CDS 40.0%
GGCATCATATAGAGAAAGAC+AGG + chr8_1:52916360-52916379 Msa1200330:CDS 40.0%
GCTATGATGAGGAATAACTC+CGG - chr8_1:52916392-52916411 None:intergenic 40.0%
!!! ACCCTTTTAGAGCTATGATG+AGG - chr8_1:52916403-52916422 None:intergenic 40.0%
! AGCATAATGGGAGTTGGAGT+CGG + chr8_1:52910711-52910730 Msa1200330:exon 45.0%
GAGGAGGGAATGGTGATATA+TGG + chr8_1:52910733-52910752 Msa1200330:CDS 45.0%
!! CTTTGCTCTGGCTTTGAATG+CGG + chr8_1:52911123-52911142 Msa1200330:intron 45.0%
AATGTACCCCGGAACAATAG+CGG + chr8_1:52911280-52911299 Msa1200330:intron 45.0%
TGGACAAACCGCTATTGTTC+CGG - chr8_1:52911291-52911310 None:intergenic 45.0%
AAAACCTGTGTGGAAGGGTA+CGG + chr8_1:52911388-52911407 Msa1200330:intron 45.0%
GTCACTAAGCTCTTGGTTAG+GGG - chr8_1:52911831-52911850 None:intergenic 45.0%
TTTCTCGGACTAACTGGGTA+AGG + chr8_1:52911861-52911880 Msa1200330:intron 45.0%
AATGTAAAGACCGGAGTAGC+TGG - chr8_1:52912056-52912075 None:intergenic 45.0%
!! GTGCAGATTTGGTGCAACAT+TGG - chr8_1:52912176-52912195 None:intergenic 45.0%
TATGAAGGTCTGGCTAAGGT+TGG + chr8_1:52912286-52912305 Msa1200330:CDS 45.0%
ACGGTACAAAACCATCACCA+AGG - chr8_1:52912338-52912357 None:intergenic 45.0%
!!! TTGGTGATGGTTTTGTACCG+TGG + chr8_1:52912337-52912356 Msa1200330:CDS 45.0%
TCTGAATATCCTACCAGTGC+TGG - chr8_1:52912364-52912383 None:intergenic 45.0%
CCACTAACTAACCATCCAGA+TGG - chr8_1:52912436-52912455 None:intergenic 45.0%
! CCATCTGGATGGTTAGTTAG+TGG + chr8_1:52912433-52912452 Msa1200330:CDS 45.0%
GTTGGGGTTCTGTGCTTAAT+AGG + chr8_1:52912487-52912506 Msa1200330:CDS 45.0%
! GGTTTTCCAGCTGAACTATC+TGG - chr8_1:52912726-52912745 None:intergenic 45.0%
TAAGTCGAGCAGGTGTGATT+AGG - chr8_1:52912805-52912824 None:intergenic 45.0%
!! GTTTTTGGAGGGTAGGACTT+TGG + chr8_1:52912887-52912906 Msa1200330:intron 45.0%
TAGATAAGGAGGGAAAGGGA+GGG - chr8_1:52913064-52913083 None:intergenic 45.0%
TTAGATAAGGAGGGAAAGGG+AGG - chr8_1:52913065-52913084 None:intergenic 45.0%
GGTTACTGGAGATCCACTTA+TGG + chr8_1:52913409-52913428 Msa1200330:intron 45.0%
TCTTGTTGGAGGTAACCTTG+AGG + chr8_1:52913439-52913458 Msa1200330:intron 45.0%
CTTGTTGGAGGTAACCTTGA+GGG + chr8_1:52913440-52913459 Msa1200330:intron 45.0%
TTGTTGGAGGTAACCTTGAG+GGG + chr8_1:52913441-52913460 Msa1200330:intron 45.0%
TCTGAAAATCCCCTCAAGCT+GGG - chr8_1:52913523-52913542 None:intergenic 45.0%
! TTCTGAAAATCCCCTCAAGC+TGG - chr8_1:52913524-52913543 None:intergenic 45.0%
GATGGAGATGAACGGATATG+GGG - chr8_1:52913690-52913709 None:intergenic 45.0%
GGATGGAGATGAACGGATAT+GGG - chr8_1:52913691-52913710 None:intergenic 45.0%
TGGATGGAGATGAACGGATA+TGG - chr8_1:52913692-52913711 None:intergenic 45.0%
! CTATATGTTGCCACTTCCAC+CGG + chr8_1:52914419-52914438 Msa1200330:intron 45.0%
! GTTTTTCTAACCGGTGGAAG+TGG - chr8_1:52914432-52914451 None:intergenic 45.0%
! TTTTTCCGACCAAGTGGGAA+TGG - chr8_1:52914488-52914507 None:intergenic 45.0%
!! CAAAGCTTTTTCCGACCAAG+TGG - chr8_1:52914494-52914513 None:intergenic 45.0%
CACTTGGTCGGAAAAAGCTT+TGG + chr8_1:52914492-52914511 Msa1200330:intron 45.0%
GTTGCTTAGGTCACAAACTG+TGG - chr8_1:52914738-52914757 None:intergenic 45.0%
! AATGCCAAGACTGGTTGCTT+AGG - chr8_1:52914751-52914770 None:intergenic 45.0%
! GTCACCTAAGCAACTAGTCT+TGG + chr8_1:52914775-52914794 Msa1200330:intron 45.0%
TTGGGTTTCCTGATATGCTC+TGG + chr8_1:52914885-52914904 Msa1200330:intron 45.0%
AGAAACCACCAGAGCATATC+AGG - chr8_1:52914896-52914915 None:intergenic 45.0%
TTCGCAACTGCAGAGAACTT+GGG - chr8_1:52915041-52915060 None:intergenic 45.0%
TTTCGCAACTGCAGAGAACT+TGG - chr8_1:52915042-52915061 None:intergenic 45.0%
CTCAGCTGTAGGATCAAGAT+CGG - chr8_1:52915174-52915193 None:intergenic 45.0%
TATAAAGGGCAACCATGGCT+GGG - chr8_1:52915430-52915449 None:intergenic 45.0%
TTATAAAGGGCAACCATGGC+TGG - chr8_1:52915431-52915450 None:intergenic 45.0%
CGGATTATAAAGGGCAACCA+TGG - chr8_1:52915435-52915454 None:intergenic 45.0%
GAAGTCCGATTTACATGGGA+AGG + chr8_1:52915498-52915517 Msa1200330:CDS 45.0%
GATGACAACAGTGTCTTAGG+TGG + chr8_1:52916301-52916320 Msa1200330:intron 45.0%
!! TTCAATATTTAATTAATTAA+GGG + chr8_1:52911021-52911040 Msa1200330:intron 5.0%
! ATAATGGGAGTTGGAGTCGG+AGG + chr8_1:52910714-52910733 Msa1200330:exon 50.0%
! ATGGAAAGCACATTCGGCGA+TGG + chr8_1:52910752-52910771 Msa1200330:CDS 50.0%
GTCCATACACAGCTTTGCTC+TGG + chr8_1:52911111-52911130 Msa1200330:intron 50.0%
AGCCAGAGCAAAGCTGTGTA+TGG - chr8_1:52911116-52911135 None:intergenic 50.0%
CCAAGGACCGACTAATCTGA+GGG - chr8_1:52911177-52911196 None:intergenic 50.0%
TCCAAGGACCGACTAATCTG+AGG - chr8_1:52911178-52911197 None:intergenic 50.0%
! AGATTAGTCGGTCCTTGGAC+TGG + chr8_1:52911179-52911198 Msa1200330:intron 50.0%
GACAAACCGCTATTGTTCCG+GGG - chr8_1:52911289-52911308 None:intergenic 50.0%
GGACAAACCGCTATTGTTCC+GGG - chr8_1:52911290-52911309 None:intergenic 50.0%
ACTAAGCTCTTGGTTAGGGG+CGG - chr8_1:52911828-52911847 None:intergenic 50.0%
TGCAATTCAGCCAGCTACTC+CGG + chr8_1:52912043-52912062 Msa1200330:CDS 50.0%
!!! TGTATGTGTTTTGGGGGCCT+TGG + chr8_1:52912318-52912337 Msa1200330:CDS 50.0%
ACTAACCATCCAGATGGCTC+TGG - chr8_1:52912430-52912449 None:intergenic 50.0%
AGAGTCATAGTTGTCTGGGC+TGG + chr8_1:52912699-52912718 Msa1200330:intron 50.0%
CAGCTGGAAAACCTGCAAAC+TGG + chr8_1:52912733-52912752 Msa1200330:intron 50.0%
CTCTAAACAGACTGCCATGG+AGG - chr8_1:52912759-52912778 None:intergenic 50.0%
!! AGGCTCTAAACAGACTGCCA+TGG - chr8_1:52912762-52912781 None:intergenic 50.0%
! TGGCAGTCTGTTTAGAGCCT+TGG + chr8_1:52912762-52912781 Msa1200330:intron 50.0%
TCACTTAGGGTCTGTTTGGG+AGG + chr8_1:52912863-52912882 Msa1200330:intron 50.0%
CACTTAGGGTCTGTTTGGGA+GGG + chr8_1:52912864-52912883 Msa1200330:intron 50.0%
ACTTAGGGTCTGTTTGGGAG+GGG + chr8_1:52912865-52912884 Msa1200330:intron 50.0%
! GTCTGTTTGGGAGGGGTTTT+TGG + chr8_1:52912872-52912891 Msa1200330:intron 50.0%
!! TGTTTGGGAGGGGTTTTTGG+AGG + chr8_1:52912875-52912894 Msa1200330:intron 50.0%
!! GTTTGGGAGGGGTTTTTGGA+GGG + chr8_1:52912876-52912895 Msa1200330:intron 50.0%
TTTGGAGGGTAGGACTTTGG+AGG + chr8_1:52912890-52912909 Msa1200330:intron 50.0%
TTGGAGGGTAGGACTTTGGA+GGG + chr8_1:52912891-52912910 Msa1200330:intron 50.0%
AGATAAGGAGGGAAAGGGAG+GGG - chr8_1:52913063-52913082 None:intergenic 50.0%
! TGCTGATTGGACGAATCCTC+TGG + chr8_1:52913388-52913407 Msa1200330:intron 50.0%
TGGACGAATCCTCTGGTTAC+TGG + chr8_1:52913395-52913414 Msa1200330:intron 50.0%
AGTGGATCTCCAGTAACCAG+AGG - chr8_1:52913407-52913426 None:intergenic 50.0%
AGTGCCTAATGACCAGGCAT+TGG + chr8_1:52913487-52913506 Msa1200330:intron 50.0%
GCTGTGACAGATAGGTTTGC+AGG - chr8_1:52913962-52913981 None:intergenic 50.0%
GTGACCTAAGCAACCAGTCT+TGG + chr8_1:52914744-52914763 Msa1200330:intron 50.0%
GGTTTCCTGATATGCTCTGG+TGG + chr8_1:52914888-52914907 Msa1200330:intron 50.0%
TAAACCGACGCGTGTGAAAC+AGG + chr8_1:52914953-52914972 Msa1200330:intron 50.0%
TCACTCCAGTCGGTGAATGT+TGG + chr8_1:52915070-52915089 Msa1200330:intron 50.0%
AACAGCCAACATTCACCGAC+TGG - chr8_1:52915078-52915097 None:intergenic 50.0%
! AGTCGGTGAATGTTGGCTGT+TGG + chr8_1:52915077-52915096 Msa1200330:intron 50.0%
! GGTGAATGTTGGCTGTTGGA+TGG + chr8_1:52915081-52915100 Msa1200330:intron 50.0%
GTTGGCTGTTGGATGGAGAT+CGG + chr8_1:52915088-52915107 Msa1200330:intron 50.0%
TTGGTCTGTACGCGGTTACT+TGG + chr8_1:52916338-52916357 Msa1200330:CDS 50.0%
TGGTCTGTACGCGGTTACTT+GGG + chr8_1:52916339-52916358 Msa1200330:CDS 50.0%
ATCTCACCGTCCACTTGCGA+GGG - chr8_1:52911149-52911168 None:intergenic 55.0%
AATCTCACCGTCCACTTGCG+AGG - chr8_1:52911150-52911169 None:intergenic 55.0%
TCGCAAGTGGACGGTGAGAT+TGG + chr8_1:52911149-52911168 Msa1200330:intron 55.0%
! CCCTCAGATTAGTCGGTCCT+TGG + chr8_1:52911174-52911193 Msa1200330:intron 55.0%
GAAGGTCTGGCTAAGGTTGG+AGG + chr8_1:52912289-52912308 Msa1200330:CDS 55.0%
!!! TGTTTTGGGGGCCTTGGTGA+TGG + chr8_1:52912324-52912343 Msa1200330:CDS 55.0%
TTTGTACCGTGGTCCAGCAC+TGG + chr8_1:52912348-52912367 Msa1200330:CDS 55.0%
! ATCCTACCAGTGCTGGACCA+CGG - chr8_1:52912357-52912376 None:intergenic 55.0%
AGAGGTCAACCAGAGCCATC+TGG + chr8_1:52912418-52912437 Msa1200330:CDS 55.0%
GTCAACCAGAGCCATCTGGA+TGG + chr8_1:52912422-52912441 Msa1200330:CDS 55.0%
GCTGGACCAGATAGTTCAGC+TGG + chr8_1:52912717-52912736 Msa1200330:intron 55.0%
! AACCTGCAAACTGGCCTCCA+TGG + chr8_1:52912742-52912761 Msa1200330:intron 55.0%
TCTGGTCGACTAAGTCGAGC+AGG - chr8_1:52912815-52912834 None:intergenic 55.0%
ATGGCCTGTTTCACACGCGT+CGG - chr8_1:52914960-52914979 None:intergenic 55.0%
TAATCCGCTTCAACCTGGGG+CGG + chr8_1:52915448-52915467 Msa1200330:CDS 55.0%
AGAGAAAGACAGGCAGCTGC+CGG + chr8_1:52916370-52916389 Msa1200330:CDS 55.0%
ATGGGAGTTGGAGTCGGAGG+AGG + chr8_1:52910717-52910736 Msa1200330:CDS 60.0%
TGGGAGTTGGAGTCGGAGGA+GGG + chr8_1:52910718-52910737 Msa1200330:CDS 60.0%
GTTGGAGTCGGAGGAGGGAA+TGG + chr8_1:52910723-52910742 Msa1200330:CDS 60.0%
AGCACATTCGGCGATGGCAG+TGG + chr8_1:52910758-52910777 Msa1200330:CDS 60.0%
TTGAATGCGGCCCTCGCAAG+TGG + chr8_1:52911136-52911155 Msa1200330:intron 60.0%
AAGGCCGTACCCTTCCACAC+AGG - chr8_1:52911395-52911414 None:intergenic 60.0%
!! TACCGTGGTCCAGCACTGGT+AGG + chr8_1:52912352-52912371 Msa1200330:CDS 60.0%
TGCCATGGAGGCCAGTTTGC+AGG - chr8_1:52912747-52912766 None:intergenic 60.0%
!! GGGAGGGGTTTTTGGAGGGT+AGG + chr8_1:52912880-52912899 Msa1200330:intron 60.0%
AAGGAGGGAAAGGGAGGGGA+GGG - chr8_1:52913059-52913078 None:intergenic 60.0%
TAAGGAGGGAAAGGGAGGGG+AGG - chr8_1:52913060-52913079 None:intergenic 60.0%
CAAGATCTTGGGCCCAGCCA+TGG + chr8_1:52915415-52915434 Msa1200330:CDS 60.0%
ATGCGGCCCTCGCAAGTGGA+CGG + chr8_1:52911140-52911159 Msa1200330:intron 65.0%
! GCAGCCGCCCCAGGTTGAAG+CGG - chr8_1:52915455-52915474 None:intergenic 70.0%
GACAGGAGAGCAGCCGCCCC+AGG - chr8_1:52915464-52915483 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 52910709 52916711 52910709 ID=Msa1200330;Name=Msa1200330
chr8_1 mRNA 52910709 52916711 52910709 ID=Msa1200330-mRNA-1;Parent=Msa1200330;Name=Msa1200330-mRNA-1;_AED=0.10;_eAED=0.10;_QI=8|0.8|1|1|1|1|6|213|365
chr8_1 exon 52910709 52910916 52910709 ID=Msa1200330-mRNA-1:exon:16926;Parent=Msa1200330-mRNA-1
chr8_1 exon 52911980 52912096 52911980 ID=Msa1200330-mRNA-1:exon:16927;Parent=Msa1200330-mRNA-1
chr8_1 exon 52912261 52912546 52912261 ID=Msa1200330-mRNA-1:exon:16928;Parent=Msa1200330-mRNA-1
chr8_1 exon 52913938 52914093 52913938 ID=Msa1200330-mRNA-1:exon:16929;Parent=Msa1200330-mRNA-1
chr8_1 exon 52915368 52915519 52915368 ID=Msa1200330-mRNA-1:exon:16930;Parent=Msa1200330-mRNA-1
chr8_1 exon 52916312 52916711 52916312 ID=Msa1200330-mRNA-1:exon:16931;Parent=Msa1200330-mRNA-1
chr8_1 five_prime_UTR 52910709 52910716 52910709 ID=Msa1200330-mRNA-1:five_prime_utr;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52910717 52910916 52910717 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52911980 52912096 52911980 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52912261 52912546 52912261 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52913938 52914093 52913938 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52915368 52915519 52915368 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 CDS 52916312 52916498 52916312 ID=Msa1200330-mRNA-1:cds;Parent=Msa1200330-mRNA-1
chr8_1 three_prime_UTR 52916499 52916711 52916499 ID=Msa1200330-mRNA-1:three_prime_utr;Parent=Msa1200330-mRNA-1
Gene Sequence

>Msa1200330

ATGGGAGTTGGAGTCGGAGGAGGGAATGGTGATATATGGAAAGCACATTCGGCGATGGCAGTGGTTCAATTATTCACAGGAGGTTATCATGTTATCACCAAATTGGCTCTTAATGTTGGTGTTAATCAAATCGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCCATCGCTTTTTTTCGTGAAAGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCGGTCTTTACATTTTTGTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCTAAGGTTGGAGGAATTCTTGTATGTGTTTTGGGGGCCTTGGTGATGGTTTTGTACCGTGGTCCAGCACTGGTAGGATATTCAGAAATGGACCTTATATCACACAGTGAAATAACTGCAAGAGGTCAACCAGAGCCATCTGGATGGTTAGTTAGTGGTTTAATGAATCTTGGATTAGACCATTTTCATGTTGGGGTTCTGTGCTTAATAGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCAATATTAAAGAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTGACCGATGAATCAACTGATTGGAGTTTGACACAGTCTGAAACATTTGCTGTTTTATATGCTGGAATTATTGCATCTGCCCTTAACTATGGAATCATTACATGGAGCAACAAGATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCGCTTCAACCTGGGGCGGCTGCTCTCCTGTCTAGAATTTTTATTGGAAGTCCGATTTACATGGGAAGTGTCTTAGGTGGATCTCTAATCATCATTGGTCTGTACGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCCGGAGTTATTCCTCATCATAGCTCTAAAAGGGTCCCTGAATCTCTTCACAAAACTTCATTTCCTAGAGTTAACATTTTCTCAGTCTTATCTACAAAGCCATCGGATTGA
Protein sequence

>Msa1200330

MGVGVGGGNGDIWKAHSAMAVVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAIMMGTERVNLLRYEGLAKVGGILVCVLGALVMVLYRGPALVGYSEMDLISHSEITARGQPEPSGWLVSGLMNLGLDHFHVGVLCLIGNCMCMATFLSIQAPILKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIIIGLYAVTWASYRERQAAAGVIPHHSSKRVPESLHKTSFPRVNIFSVLSTKPSD*