AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1253240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1253240 MtrunA17_Chr8g0369841 93.158 380 5 1 8 366 2 381 0.0 702
Msa1253240 MtrunA17_Chr5g0407971 73.121 346 72 1 12 336 8 353 0.0 524
Msa1253240 MtrunA17_Chr5g0407991 63.934 366 110 2 11 355 5 369 6.95e-170 479
Msa1253240 MtrunA17_Chr5g0408001 62.234 376 120 2 12 365 7 382 1.81e-166 470
Msa1253240 MtrunA17_Chr5g0408031 60.484 372 123 3 11 358 6 377 2.77e-160 454
Msa1253240 MtrunA17_Chr5g0408041 59.409 372 128 2 9 357 5 376 5.75e-156 443
Msa1253240 MtrunA17_Chr3g0142131 34.031 382 215 6 7 353 5 384 2.14e-67 218
Msa1253240 MtrunA17_Chr1g0155761 34.293 382 220 5 12 363 18 398 1.18e-64 211
Msa1253240 MtrunA17_Chr6g0483401 32.622 328 188 4 24 329 19 335 5.48e-56 187
Msa1253240 MtrunA17_Chr2g0284261 29.917 361 211 6 14 349 7 350 4.23e-44 155
Msa1253240 MtrunA17_Chr1g0164831 29.859 355 213 6 13 347 1 339 4.21e-43 152
Msa1253240 MtrunA17_Chr5g0413941 30.655 336 196 5 18 331 10 330 1.57e-41 149
Msa1253240 MtrunA17_Chr1g0160181 30.994 342 192 6 15 329 18 342 7.52e-40 145
Msa1253240 MtrunA17_Chr7g0271561 29.787 329 201 4 20 326 12 332 1.28e-38 142
Msa1253240 MtrunA17_Chr3g0114691 28.736 348 213 4 15 340 20 354 1.42e-38 142
Msa1253240 MtrunA17_Chr7g0255561 27.976 336 209 3 15 328 14 338 9.57e-38 139
Msa1253240 MtrunA17_Chr7g0255581 27.976 336 209 3 15 328 14 338 9.57e-38 139
Msa1253240 MtrunA17_Chr3g0114731 27.660 376 228 8 15 364 18 375 1.44e-36 136
Msa1253240 MtrunA17_Chr3g0126101 28.308 325 183 6 32 329 23 324 3.58e-36 134
Msa1253240 MtrunA17_Chr2g0278541 28.205 351 209 6 20 341 17 353 1.20e-35 134
Msa1253240 MtrunA17_Chr5g0413951 27.928 333 203 5 18 328 10 327 6.09e-35 131
Msa1253240 MtrunA17_Chr1g0160171 28.443 334 202 5 15 326 16 334 2.21e-34 130
Msa1253240 MtrunA17_Chr2g0278561 26.979 341 209 6 20 335 20 345 2.55e-34 130
Msa1253240 MtrunA17_Chr5g0404811 30.315 254 157 5 109 355 8 248 2.64e-34 127
Msa1253240 MtrunA17_Chr4g0050891 28.086 324 201 4 20 321 18 331 3.35e-34 129
Msa1253240 MtrunA17_Chr3g0129601 28.852 357 201 7 15 339 29 364 3.94e-34 129
Msa1253240 MtrunA17_Chr4g0059311 27.119 354 217 6 18 345 14 352 3.94e-34 129
Msa1253240 MtrunA17_Chr7g0263101 28.455 369 212 9 14 351 12 359 5.37e-34 129
Msa1253240 MtrunA17_Chr5g0413921 29.552 335 195 7 18 328 10 327 1.88e-33 127
Msa1253240 MtrunA17_Chr3g0081421 28.657 335 205 6 15 326 17 340 1.96e-33 128
Msa1253240 MtrunA17_Chr3g0081511 27.893 337 204 6 15 327 17 338 2.45e-33 127
Msa1253240 MtrunA17_Chr8g0354121 26.627 338 210 5 15 327 13 337 7.75e-33 126
Msa1253240 MtrunA17_Chr1g0186571 28.402 338 200 9 15 328 13 332 2.07e-32 124
Msa1253240 MtrunA17_Chr1g0184221 26.064 376 222 7 12 350 13 369 3.18e-32 124
Msa1253240 MtrunA17_Chr1g0160111 27.077 325 206 3 24 326 16 331 4.42e-32 124
Msa1253240 MtrunA17_Chr1g0186641 26.706 337 207 7 14 327 12 331 4.71e-31 120
Msa1253240 MtrunA17_Chr5g0413931 28.657 335 200 8 20 331 11 329 1.04e-30 119
Msa1253240 MtrunA17_Chr8g0334761 26.857 350 211 6 20 346 15 342 1.68e-30 119
Msa1253240 MtrunA17_Chr1g0186601 25.770 357 221 8 14 346 15 351 2.23e-30 119
Msa1253240 MtrunA17_Chr1g0150151 29.889 271 169 5 79 343 97 352 2.27e-30 119
Msa1253240 MtrunA17_Chr3g0129591 27.566 341 194 7 19 326 9 329 2.85e-30 119
Msa1253240 MtrunA17_Chr8g0334771 26.902 368 222 8 19 354 14 366 4.29e-30 118
Msa1253240 MtrunA17_Chr2g0278551 27.711 332 203 6 20 328 17 334 1.54e-29 117
Msa1253240 MtrunA17_Chr2g0290611 26.829 369 223 8 20 362 17 364 1.96e-29 116
Msa1253240 MtrunA17_Chr3g0114701 27.879 330 202 6 23 329 17 333 4.14e-29 116
Msa1253240 MtrunA17_Chr1g0186611 26.496 351 218 6 14 341 15 348 6.42e-29 115
Msa1253240 MtrunA17_Chr1g0171301 26.100 341 208 8 14 328 15 337 8.26e-29 114
Msa1253240 MtrunA17_Chr4g0050931 27.215 316 201 6 20 333 17 305 1.07e-28 113
Msa1253240 MtrunA17_Chr3g0114711 25.886 367 222 10 26 343 26 391 3.76e-28 113
Msa1253240 MtrunA17_Chr4g0050881 27.859 341 209 5 20 337 14 340 5.61e-28 112
Msa1253240 MtrunA17_Chr5g0413961 27.300 337 202 8 20 333 19 335 8.04e-28 112
Msa1253240 MtrunA17_Chr2g0332001 27.246 345 209 8 15 336 38 363 1.52e-27 112
Msa1253240 MtrunA17_Chr1g0182291 26.364 330 201 6 32 337 32 343 2.24e-27 110
Msa1253240 MtrunA17_Chr3g0129571 24.590 366 216 9 19 347 11 353 2.25e-27 110
Msa1253240 MtrunA17_Chr4g0050941 26.923 338 216 4 20 334 17 346 3.60e-27 110
Msa1253240 MtrunA17_Chr1g0186561 27.219 338 207 6 14 328 15 336 4.68e-27 110
Msa1253240 MtrunA17_Chr6g0463971 25.074 339 209 6 15 326 16 336 7.01e-27 109
Msa1253240 MtrunA17_Chr8g0334751 26.757 370 230 7 7 352 3 355 1.08e-26 108
Msa1253240 MtrunA17_Chr2g0310441 25.076 331 208 4 20 326 15 329 3.53e-26 107
Msa1253240 MtrunA17_Chr1g0177221 32.103 271 135 7 12 254 15 264 1.15e-25 104
Msa1253240 MtrunA17_Chr8g0383731 25.723 346 214 7 22 339 12 342 2.32e-25 105
Msa1253240 MtrunA17_Chr4g0051021 23.944 355 225 7 20 347 19 355 4.12e-25 104
Msa1253240 MtrunA17_Chr4g0073241 26.061 330 201 5 32 336 25 336 4.51e-24 101
Msa1253240 MtrunA17_Chr5g0428881 25.946 370 226 8 15 350 18 373 8.45e-24 101
Msa1253240 MtrunA17_Chr3g0129581 24.928 349 221 6 19 339 9 344 2.91e-23 99.4
Msa1253240 MtrunA17_Chr5g0429001 27.626 257 167 3 75 326 32 274 1.47e-22 97.1
Msa1253240 MtrunA17_Chr7g0227921 25.225 333 207 7 19 327 15 329 2.18e-22 97.1
Msa1253240 MtrunA17_Chr6g0451211 23.209 349 218 8 20 343 25 348 1.16e-21 95.1
Msa1253240 MtrunA17_Chr6g0451201 24.860 358 218 8 20 353 25 355 1.69e-21 94.4
Msa1253240 MtrunA17_Chr5g0441761 25.152 330 205 5 19 326 18 327 3.65e-21 93.2
Msa1253240 MtrunA17_Chr3g0084091 27.734 256 164 5 75 326 11 249 5.79e-21 92.0
Msa1253240 MtrunA17_Chr5g0399281 26.866 335 204 8 23 332 16 334 3.95e-20 90.5
Msa1253240 MtrunA17_Chr1g0211801 25.856 263 161 5 12 254 8 256 4.44e-20 89.0
Msa1253240 MtrunA17_Chr3g0126091 23.011 352 227 11 20 343 16 351 2.45e-17 82.4
Msa1253240 MtrunA17_Chr6g0451261 21.519 316 201 8 29 317 25 320 3.26e-17 83.6
Msa1253240 MtrunA17_Chr2g0278021 27.660 235 159 4 109 341 2 227 1.06e-16 79.3
Msa1253240 MtrunA17_Chr6g0451171 23.270 318 204 7 32 327 29 328 1.00e-15 77.8
Msa1253240 MtrunA17_Chr4g0051001 23.701 308 199 6 20 304 36 330 1.05e-15 77.4
Msa1253240 MtrunA17_Chr6g0451251 24.069 349 214 9 20 343 25 347 3.71e-15 75.9
Msa1253240 MtrunA17_Chr8g0334711 27.933 179 106 3 20 177 15 191 1.42e-14 72.0
Msa1253240 MtrunA17_Chr5g0404801 32.743 113 55 1 15 106 7 119 5.48e-14 68.2
Msa1253240 MtrunA17_Chr4g0056081 23.795 332 209 9 23 326 22 337 5.43e-13 69.3
Msa1253240 MtrunA17_Chr6g0451191 22.967 209 142 4 120 327 13 203 1.08e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1253240 AT4G19185.1 63.846 390 114 3 4 366 9 398 1.32e-178 501
Msa1253240 AT5G45370.2 63.536 362 109 2 6 344 10 371 1.62e-162 460
Msa1253240 AT5G45370.4 63.536 362 109 2 6 344 10 371 1.62e-162 460
Msa1253240 AT3G45870.1 65.861 331 88 3 12 321 8 334 1.62e-154 440
Msa1253240 AT5G45370.1 61.050 362 94 3 6 344 10 347 9.75e-152 432
Msa1253240 AT4G19185.2 66.118 304 97 2 69 366 17 320 1.07e-146 417
Msa1253240 AT3G45870.8 65.605 314 83 3 12 304 8 317 1.21e-146 418
Msa1253240 AT5G45370.3 58.912 331 95 2 16 344 20 311 5.78e-133 383
Msa1253240 AT5G45370.6 65.799 269 90 1 78 344 1 269 5.49e-126 363
Msa1253240 AT5G45370.5 65.799 269 90 1 78 344 1 269 5.49e-126 363
Msa1253240 AT3G45870.9 62.879 264 73 3 12 254 8 267 3.87e-113 331
Msa1253240 AT3G45870.5 66.822 214 67 2 108 321 50 259 1.48e-98 295
Msa1253240 AT3G45870.6 66.497 197 62 2 108 304 50 242 8.50e-91 273
Msa1253240 AT3G45870.7 66.497 197 62 2 108 304 50 242 8.50e-91 273
Msa1253240 AT3G45870.2 67.380 187 57 2 135 321 1 183 2.35e-85 258
Msa1253240 AT1G75500.1 34.513 339 192 4 15 331 19 349 1.21e-61 202
Msa1253240 AT1G75500.2 34.513 339 192 4 15 331 19 349 1.21e-61 202
Msa1253240 AT3G45870.4 62.416 149 52 2 106 254 1 145 7.41e-60 190
Msa1253240 AT3G18200.2 32.791 369 198 6 5 348 24 367 1.37e-59 197
Msa1253240 AT3G53210.1 33.531 337 188 4 15 329 9 331 1.71e-57 191
Msa1253240 AT3G45870.3 61.905 147 52 2 108 254 50 192 3.09e-57 185
Msa1253240 AT3G53210.2 32.740 281 174 3 57 336 15 281 1.07e-45 159
Msa1253240 AT3G53210.3 32.950 261 139 4 15 253 9 255 3.30e-43 151
Msa1253240 AT3G18200.1 33.588 262 145 5 91 348 1 237 3.00e-40 143
Msa1253240 AT4G30420.2 29.738 343 201 5 9 326 2 329 1.14e-39 145
Msa1253240 AT4G30420.1 30.030 333 193 5 19 326 2 319 2.39e-39 144
Msa1253240 AT1G21890.1 30.523 344 211 4 7 328 2 339 7.26e-39 143
Msa1253240 AT5G07050.1 28.852 357 222 7 15 347 17 365 2.57e-38 142
Msa1253240 AT1G09380.1 28.528 326 198 5 19 321 11 324 1.48e-37 139
Msa1253240 AT2G39510.1 28.571 343 203 7 14 331 6 331 9.21e-37 137
Msa1253240 AT4G01430.1 26.923 364 218 7 14 353 7 346 6.96e-36 134
Msa1253240 AT1G44800.1 27.485 342 211 5 8 327 3 329 9.80e-36 134
Msa1253240 AT4G08300.1 28.280 343 210 5 8 327 3 332 1.68e-35 133
Msa1253240 AT1G11460.1 27.647 340 206 7 14 329 14 337 1.84e-35 132
Msa1253240 AT4G01440.1 26.705 352 214 6 14 343 8 337 5.98e-35 132
Msa1253240 AT3G30340.1 27.405 343 213 5 10 330 5 333 2.30e-34 130
Msa1253240 AT4G08290.1 28.161 348 212 7 20 343 17 350 3.68e-34 130
Msa1253240 AT1G11450.3 27.353 340 206 7 14 329 14 336 5.12e-34 129
Msa1253240 AT1G01070.1 27.273 363 216 9 20 352 20 364 1.09e-33 128
Msa1253240 AT2G40900.1 26.786 336 204 6 15 328 10 325 1.24e-32 126
Msa1253240 AT5G40240.2 27.654 358 208 9 3 326 14 354 3.97e-32 124
Msa1253240 AT5G40240.1 27.976 336 198 8 18 326 22 340 4.60e-31 121
Msa1253240 AT5G40240.3 27.976 336 198 8 18 326 22 340 4.60e-31 121
Msa1253240 AT2G37460.1 29.167 336 192 9 19 328 18 333 1.09e-30 120
Msa1253240 AT1G21890.2 29.721 323 199 4 7 307 2 318 1.22e-30 120
Msa1253240 AT3G28050.1 28.669 293 172 8 46 326 59 326 6.04e-30 118
Msa1253240 AT4G01440.3 26.837 313 192 5 14 304 8 305 7.04e-30 117
Msa1253240 AT4G01430.2 26.814 317 195 6 12 304 5 308 9.30e-30 117
Msa1253240 AT5G64700.1 28.824 340 204 5 15 328 7 334 9.83e-30 117
Msa1253240 AT1G43650.1 26.786 336 206 4 15 328 6 323 1.18e-29 117
Msa1253240 AT2G37450.2 28.909 339 209 8 20 353 13 324 4.79e-29 115
Msa1253240 AT1G01070.2 28.839 267 166 5 73 333 47 295 1.25e-28 114
Msa1253240 AT1G11450.5 26.974 304 181 7 50 329 6 292 1.59e-27 110
Msa1253240 AT1G11450.2 27.365 296 174 7 58 329 7 285 1.71e-27 110
Msa1253240 AT1G11450.4 25.915 328 202 7 1 304 1 311 6.64e-27 109
Msa1253240 AT3G28100.1 29.249 253 163 4 78 328 97 335 7.66e-27 109
Msa1253240 AT1G11450.1 27.692 260 168 5 73 329 2 244 9.09e-27 107
Msa1253240 AT3G28130.5 29.921 254 162 4 77 328 9 248 1.00e-26 107
Msa1253240 AT3G28130.1 29.921 254 162 4 77 328 9 248 1.00e-26 107
Msa1253240 AT3G56620.1 26.140 329 202 6 15 321 10 319 1.55e-26 109
Msa1253240 AT5G40230.1 25.806 372 228 9 6 341 4 363 1.65e-26 108
Msa1253240 AT5G13670.1 26.163 344 194 8 19 327 11 329 3.60e-26 108
Msa1253240 AT3G28070.2 28.627 255 162 5 78 328 8 246 5.81e-26 105
Msa1253240 AT3G28130.2 29.921 254 162 4 77 328 95 334 6.56e-26 107
Msa1253240 AT1G25270.1 24.384 365 237 7 15 355 2 351 9.77e-26 106
Msa1253240 AT5G40210.1 27.731 357 203 9 10 343 8 332 1.61e-25 105
Msa1253240 AT1G68170.1 24.100 361 238 5 15 352 2 349 2.35e-25 105
Msa1253240 AT1G68170.2 24.100 361 238 5 15 352 12 359 3.07e-25 105
Msa1253240 AT3G28070.1 28.458 253 165 4 78 328 100 338 3.16e-25 105
Msa1253240 AT4G01440.4 28.137 263 152 5 14 254 8 255 3.75e-25 103
Msa1253240 AT4G01440.5 25.200 250 164 4 95 343 2 229 2.68e-24 100
Msa1253240 AT4G01440.2 25.200 250 164 4 95 343 2 229 2.68e-24 100
Msa1253240 AT4G15540.1 29.317 249 150 3 79 326 101 324 7.58e-24 101
Msa1253240 AT4G15540.2 29.317 249 150 3 79 326 101 324 7.58e-24 101
Msa1253240 AT3G28080.5 27.451 255 165 6 78 328 8 246 3.01e-22 95.1
Msa1253240 AT3G28080.7 27.451 255 165 6 78 328 8 246 3.01e-22 95.1
Msa1253240 AT3G28080.8 27.451 255 165 6 78 328 8 246 3.01e-22 95.1
Msa1253240 AT3G28080.6 27.451 255 165 6 78 328 8 246 3.01e-22 95.1
Msa1253240 AT3G28080.2 27.451 255 165 6 78 328 89 327 1.42e-21 94.7
Msa1253240 AT4G01430.3 26.794 209 138 3 124 330 2 197 5.08e-21 90.9
Msa1253240 AT4G28040.1 24.202 376 217 10 14 360 6 342 1.88e-20 91.7
Msa1253240 AT4G28040.5 24.202 376 217 10 14 360 6 342 1.88e-20 91.7
Msa1253240 AT4G28040.3 24.202 376 217 10 14 360 6 342 1.88e-20 91.7
Msa1253240 AT4G28040.4 24.202 376 217 10 14 360 6 342 1.88e-20 91.7
Msa1253240 AT4G28040.2 24.202 376 217 10 14 360 6 342 1.88e-20 91.7
Msa1253240 AT1G70260.1 22.346 358 232 6 19 347 15 355 9.32e-20 90.1
Msa1253240 AT4G08290.2 27.626 257 149 5 20 253 17 259 2.70e-19 87.4
Msa1253240 AT2G37450.3 30.315 254 152 7 80 328 1 234 3.32e-19 86.7
Msa1253240 AT3G28080.1 26.154 325 199 8 29 328 27 335 8.62e-19 87.0
Msa1253240 AT3G30340.2 25.468 267 163 5 10 254 5 257 2.25e-18 84.7
Msa1253240 AT3G28070.3 27.273 231 148 5 78 304 100 314 4.39e-18 84.3
Msa1253240 AT4G01450.2 25.672 335 208 4 14 326 8 323 4.15e-17 82.0
Msa1253240 AT4G01450.1 24.920 313 194 4 14 304 8 301 4.42e-17 82.0
Msa1253240 AT4G24980.1 24.252 301 159 6 32 327 3 239 5.30e-17 80.5
Msa1253240 AT3G28130.3 27.727 220 143 4 109 326 2 207 6.21e-17 79.7
Msa1253240 AT5G47470.3 24.324 333 204 9 20 326 62 372 1.01e-16 81.3
Msa1253240 AT5G47470.2 24.324 333 204 9 20 326 62 372 1.22e-16 80.9
Msa1253240 AT5G47470.1 24.324 333 204 9 20 326 34 344 1.28e-16 80.9
Msa1253240 AT2G37450.1 26.433 314 167 8 20 328 13 267 1.78e-16 79.3
Msa1253240 AT1G43650.2 27.200 250 143 4 15 243 6 237 2.19e-16 78.6
Msa1253240 AT3G28070.5 25.676 222 149 4 109 328 2 209 5.01e-16 77.0
Msa1253240 AT1G60050.1 22.316 354 226 5 20 340 17 354 7.53e-16 78.6
Msa1253240 AT4G01450.4 25.391 256 151 3 14 248 8 244 5.38e-15 74.7
Msa1253240 AT5G64700.2 27.165 254 148 4 15 243 7 248 6.93e-15 74.3
Msa1253240 AT3G28100.3 33.094 139 80 2 78 216 97 222 1.04e-13 70.9
Msa1253240 AT3G28080.9 25.000 224 148 6 109 328 2 209 5.86e-13 68.2
Msa1253240 AT4G01450.3 25.000 232 134 3 14 224 8 220 7.94e-13 68.2
Msa1253240 AT3G28130.4 30.000 150 92 2 77 226 95 231 1.67e-12 67.4
Msa1253240 AT3G28100.2 34.711 121 72 1 78 191 97 217 9.26e-12 65.1
Msa1253240 AT4G16620.1 24.850 334 198 9 45 351 44 351 1.35e-11 65.5

Find 103 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTGTGCTCAGGATATT+TGG 0.169312 8_2:+50638145 Msa1253240:intron
AGGAATTCTTGTATGTGTTT+TGG 0.209877 8_2:+50638485 Msa1253240:CDS
GCAGGATACTTCTTTAATAT+TGG 0.251367 8_2:-50640099 None:intergenic
GTTGGGGTTCTGTGCTTAAT+AGG 0.260906 8_2:+50638663 Msa1253240:CDS
ACCAACATTAAGAGCCAATT+TGG 0.273714 8_2:-50637013 None:intergenic
TTCCTCATCATAGCTCTAAA+AGG 0.273925 8_2:+50642578 Msa1253240:CDS
ACAGCATATTCATACTTCTT+TGG 0.291308 8_2:+50640135 Msa1253240:CDS
TTATCATGTTATCACCAAAT+TGG 0.309087 8_2:+50636999 Msa1253240:CDS
ATTGCATCTGCCCTTAACTA+TGG 0.313466 8_2:+50641534 Msa1253240:CDS
GTTAGTGGTTTAATGAATCT+TGG 0.332062 8_2:+50638624 Msa1253240:CDS
GAGGAGGGAATGGTGATATA+TGG 0.332579 8_2:+50636932 Msa1253240:CDS
CTTTATAATCCGCTTCAACC+TGG 0.334073 8_2:+50641603 Msa1253240:CDS
AAAAGATCGAAGGTTGTTAT+TGG 0.344098 8_2:-50636769 None:intergenic
TTATTTCACTGTGTGATATA+AGG 0.359568 8_2:-50638566 None:intergenic
GCTTTGTTTCTGAGTTAGTT+TGG 0.366432 8_2:-50636676 None:intergenic
ATCTAAGAATCGAAGCATAA+TGG 0.369971 8_2:+50636894 Msa1253240:exon
TTGGTCTGTACGCGGTTACT+TGG 0.370160 8_2:+50642518 Msa1253240:CDS
ATGTAATGATTCCATAGTTA+AGG 0.370346 8_2:-50641545 None:intergenic
ATCCTATATACACATATAAC+TGG 0.379566 8_2:+50642741 Msa1253240:three_prime_UTR
CATGATGACAACAGTGTCTT+AGG 0.379611 8_2:+50642478 Msa1253240:intron
TTTATAATCCGCTTCAACCT+GGG 0.386468 8_2:+50641604 Msa1253240:CDS
TACATGGAGCAACAAGATCT+TGG 0.395024 8_2:+50641563 Msa1253240:CDS
CCATCTGGATGGTTAGTTAG+TGG 0.401291 8_2:+50638609 Msa1253240:CDS
ACAGAACCCCAACATGAAAA+TGG 0.403050 8_2:-50638653 None:intergenic
TTATAAAGGGCAACCATGGC+TGG 0.406595 8_2:-50641588 None:intergenic
GGAGTCGGAGTCGGAGGAGG+AGG 0.407539 8_2:+50636916 Msa1253240:CDS
ACTCAGAAACAAAGCATCAT+TGG 0.414199 8_2:+50636684 Msa1253240:five_prime_UTR
TTGTCATCTTCTTGCCGTGC+CGG 0.415727 8_2:-50636586 None:intergenic
GCTGTGACAGATAGGTTTGC+AGG 0.416358 8_2:-50640117 None:intergenic
GACAGGAGAGCAGCCGCCCC+AGG 0.425659 8_2:-50641621 None:intergenic
CAGGTTGAAGCGGATTATAA+AGG 0.433302 8_2:-50641602 None:intergenic
TATTGGAAGTCCGATTTACA+TGG 0.436691 8_2:+50641653 Msa1253240:CDS
AAGGTTGTTATTGGTCTGTT+GGG 0.438015 8_2:-50636760 None:intergenic
GAAGGTTGTTATTGGTCTGT+TGG 0.441513 8_2:-50636761 None:intergenic
AATGTAAAGACCGGAGTAGC+TGG 0.445921 8_2:-50638232 None:intergenic
GTAACAAACAAGTTTGGTTG+TGG 0.455387 8_2:-50636733 None:intergenic
ATGTACCTTCCCATGTAAAT+CGG 0.455392 8_2:-50641663 None:intergenic
AACCAGTTATATGTGTATAT+AGG 0.457786 8_2:-50642743 None:intergenic
ATGAATATGCTGTGACAGAT+AGG 0.458154 8_2:-50640125 None:intergenic
CTTGCTAAGATATGAAGGTC+TGG 0.466517 8_2:+50638452 Msa1253240:CDS
AGAGGTCAACCAGAGCCATC+TGG 0.467959 8_2:+50638594 Msa1253240:CDS
AGTCTTATCTACAAAGCCTT+CGG 0.468454 8_2:+50642651 Msa1253240:CDS
TGATATATGGAAAGCACATT+CGG 0.477060 8_2:+50636945 Msa1253240:CDS
TAACAAACAAGTTTGGTTGT+GGG 0.478377 8_2:-50636732 None:intergenic
TCTAAGAATCGAAGCATAAT+GGG 0.480083 8_2:+50636895 Msa1253240:exon
GGTGGATCTCTAATCATCAT+TGG 0.480528 8_2:+50642499 Msa1253240:CDS
ATGGGAGTCGGAGTCGGAGG+AGG 0.481159 8_2:+50636913 Msa1253240:CDS
AGGTTGAAGCGGATTATAAA+GGG 0.485405 8_2:-50641601 None:intergenic
ACCAAATTGGCTCTTAATGT+TGG 0.489003 8_2:+50637012 Msa1253240:CDS
AGCATAATGGGAGTCGGAGT+CGG 0.491952 8_2:+50636907 Msa1253240:exon
TGTAATGATTCCATAGTTAA+GGG 0.493958 8_2:-50641544 None:intergenic
ACATGGAGCAACAAGATCTT+GGG 0.500761 8_2:+50641564 Msa1253240:CDS
TGACCGATGAATCAACTGAT+TGG 0.503087 8_2:+50640190 Msa1253240:CDS
GTGAACTTGCTAAGATATGA+AGG 0.503183 8_2:+50638447 Msa1253240:CDS
TTTGTACCGTGGTCCAGCAC+TGG 0.506042 8_2:+50638524 Msa1253240:CDS
TCTGAATATCCTACCAGTGC+TGG 0.507673 8_2:-50638537 None:intergenic
GGAGTCGGAGGAGGAGGGAA+TGG 0.512030 8_2:+50636922 Msa1253240:CDS
GAAGGTCTGGCTAAGGTTGG+AGG 0.512188 8_2:+50638465 Msa1253240:CDS
TCCTCATCATAGCTCTAAAA+GGG 0.513226 8_2:+50642579 Msa1253240:CDS
TGGTCTGTACGCGGTTACTT+GGG 0.518945 8_2:+50642519 Msa1253240:CDS
ACTGAGAAAATGTTAACTCT+AGG 0.522894 8_2:-50642631 None:intergenic
TGAATTGCAGCAGCATAAGT+TGG 0.522951 8_2:-50638208 None:intergenic
GGCATCATATAGAGAAAGAC+AGG 0.523841 8_2:+50642540 Msa1253240:CDS
TGCAATTCAGCCAGCTACTC+CGG 0.528621 8_2:+50638222 Msa1253240:CDS
AGCACATTCGGCGATGGCAG+TGG 0.530212 8_2:+50636957 Msa1253240:CDS
AGAGAAAGACAGGCAGCTGC+CGG 0.532084 8_2:+50642550 Msa1253240:CDS
AATTCATTTCATCAATCCGA+AGG 0.544959 8_2:-50642667 None:intergenic
CAAGATCTTGGGCCCAGCCA+TGG 0.545098 8_2:+50641575 Msa1253240:CDS
TATGAAGGTCTGGCTAAGGT+TGG 0.555628 8_2:+50638462 Msa1253240:CDS
TTATAATCCGCTTCAACCTG+GGG 0.559165 8_2:+50641605 Msa1253240:CDS
CTTCTTTGGAGCTTTACTGA+TGG 0.559547 8_2:+50640149 Msa1253240:CDS
ACTGGTAGGATATTCAGAAA+TGG 0.564144 8_2:+50638542 Msa1253240:CDS
ACTCCAATCAGTTGATTCAT+CGG 0.565096 8_2:-50640193 None:intergenic
ACTAACCATCCAGATGGCTC+TGG 0.565423 8_2:-50638603 None:intergenic
AAGATATGAAGGTCTGGCTA+AGG 0.565630 8_2:+50638458 Msa1253240:CDS
GCAGTGGTTCAATTATTCAC+AGG 0.565872 8_2:+50636973 Msa1253240:CDS
GTGATGATACAATAGAAAAG+AGG 0.566840 8_2:+50636833 Msa1253240:five_prime_UTR
GAGTCGGAGTCGGAGGAGGA+GGG 0.573797 8_2:+50636917 Msa1253240:CDS
TATAAAGGGCAACCATGGCT+GGG 0.577174 8_2:-50641587 None:intergenic
CGGATTATAAAGGGCAACCA+TGG 0.578298 8_2:-50641592 None:intergenic
GAAGTCCGATTTACATGGGA+AGG 0.580552 8_2:+50641658 Msa1253240:CDS
CACAGTGAAATAACTGCAAG+AGG 0.583694 8_2:+50638576 Msa1253240:CDS
ATGGAAAGCACATTCGGCGA+TGG 0.587206 8_2:+50636951 Msa1253240:CDS
TAATCCGCTTCAACCTGGGG+CGG 0.591806 8_2:+50641608 Msa1253240:CDS
GCAGCCGCCCCAGGTTGAAG+CGG 0.592329 8_2:-50641612 None:intergenic
AATAGGAAACTGCATGTGCA+TGG 0.596217 8_2:+50638680 Msa1253240:CDS
CCACTAACTAACCATCCAGA+TGG 0.597835 8_2:-50638609 None:intergenic
GTAGTTTGAAGGAGCCGGCA+CGG 0.601329 8_2:+50636572 None:intergenic
GTGGTTCAATTATTCACAGG+AGG 0.604087 8_2:+50636976 Msa1253240:CDS
CAATAGACATTAGCGTAGAC+CGG 0.604092 8_2:+50636606 Msa1253240:five_prime_UTR
GATGACAACAGTGTCTTAGG+TGG 0.607908 8_2:+50642481 Msa1253240:intron
ATGATACAATAGAAAAGAGG+AGG 0.617313 8_2:+50636836 Msa1253240:five_prime_UTR
TTAACTATGGAATCATTACA+TGG 0.617990 8_2:+50641547 Msa1253240:CDS
AATCGAAGCATAATGGGAGT+CGG 0.618414 8_2:+50636901 Msa1253240:exon
TTGATGAAATGAATTGTGAA+AGG 0.621897 8_2:+50642675 Msa1253240:exon
ATTGGAAGTCCGATTTACAT+GGG 0.628732 8_2:+50641654 Msa1253240:CDS
ATAATGGGAGTCGGAGTCGG+AGG 0.643457 8_2:+50636910 Msa1253240:exon
GTCAACCAGAGCCATCTGGA+TGG 0.657589 8_2:+50638598 Msa1253240:CDS
ATCCTACCAGTGCTGGACCA+CGG 0.660089 8_2:-50638530 None:intergenic
GCTATGATGAGGAATAACTC+CGG 0.677307 8_2:-50642569 None:intergenic
AATCATCATTGGTCTGTACG+CGG 0.688883 8_2:+50642510 Msa1253240:CDS
GATATATTACAAATTCGACA+AGG 0.726660 8_2:+50642808 Msa1253240:three_prime_UTR
ACGGTACAAAACCATCACCA+AGG 0.737736 8_2:-50638511 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAAATATTGACATAA+GGG - chr8_2:50637204-50637223 None:intergenic 10.0%
!! ATTAATTAAATATTGACATA+AGG - chr8_2:50637205-50637224 None:intergenic 10.0%
!! TGTCAATATTTAATTAATTT+AGG + chr8_2:50637207-50637226 Msa1253240:intron 10.0%
!!! TACTTTTCTTTTTTAAATTA+CGG - chr8_2:50639193-50639212 None:intergenic 10.0%
!!! ATAGATTTTCAAAAATATTA+AGG - chr8_2:50640010-50640029 None:intergenic 10.0%
!!! TTAATATTTTTGAAAATCTA+TGG + chr8_2:50640009-50640028 Msa1253240:intron 10.0%
!!! TTAATTAATTTAGGTTATAG+TGG + chr8_2:50637216-50637235 Msa1253240:intron 15.0%
!!! TATTTTTACGTTTTTTTTAC+TGG - chr8_2:50637540-50637559 None:intergenic 15.0%
!! GTAATAAACAATCATTTAAA+GGG - chr8_2:50638743-50638762 None:intergenic 15.0%
!! TGTAATAAACAATCATTTAA+AGG - chr8_2:50638744-50638763 None:intergenic 15.0%
!! ATACTCTAAATTTATAGTAA+TGG + chr8_2:50639504-50639523 Msa1253240:intron 15.0%
!!! TTATGTTTAATTTATCATCA+TGG + chr8_2:50640062-50640081 Msa1253240:intron 15.0%
!!! ATTTTTTTGTGTTTTTGTAA+TGG + chr8_2:50640375-50640394 Msa1253240:intron 15.0%
!! AAAGTTAAAAGACAAAATTA+AGG - chr8_2:50640507-50640526 None:intergenic 15.0%
!!! TTAATTTTGTCTTTTAACTT+TGG + chr8_2:50640506-50640525 Msa1253240:intron 15.0%
!!! TAATTTTGTCTTTTAACTTT+GGG + chr8_2:50640507-50640526 Msa1253240:intron 15.0%
!! ATTAAATAATATGCCATAAT+GGG - chr8_2:50640625-50640644 None:intergenic 15.0%
!! CTAATTTCATCTTATATATA+AGG - chr8_2:50641824-50641843 None:intergenic 15.0%
!! AATAAGAGAGAAAAAAATTA+TGG - chr8_2:50642718-50642737 None:intergenic 15.0%
!! AAAAATACTTGAAAAGAATT+TGG + chr8_2:50642847-50642866 Msa1253240:three_prime_UTR 15.0%
!! AAAAATGAATGAATGAAGTT+AGG - chr8_2:50636654-50636673 None:intergenic 20.0%
!! ATTTGTATAATCTCTGTTTA+GGG + chr8_2:50637149-50637168 Msa1253240:intron 20.0%
!!! AATCATCTTTTGTTTCTTAT+TGG + chr8_2:50638169-50638188 Msa1253240:CDS 20.0%
!! ATTTAATTAATGTGCAGATT+TGG - chr8_2:50638363-50638382 None:intergenic 20.0%
!! ATCAAATGTGTATAATACAT+GGG - chr8_2:50638848-50638867 None:intergenic 20.0%
!! TCTTAGTATAAATATAGAGA+CGG + chr8_2:50639762-50639781 Msa1253240:intron 20.0%
!! ATTAGCAATATAACTAACAA+TGG - chr8_2:50640296-50640315 None:intergenic 20.0%
!!! AGTTATATTGCTAATCATTT+TGG + chr8_2:50640301-50640320 Msa1253240:intron 20.0%
!! TTAAATAATATGCCATAATG+GGG - chr8_2:50640624-50640643 None:intergenic 20.0%
!! GATTAAATAATATGCCATAA+TGG - chr8_2:50640626-50640645 None:intergenic 20.0%
!!! TTTATGCAATTTTCTATATG+CGG + chr8_2:50640691-50640710 Msa1253240:intron 20.0%
!!! ACTCAAAATTATGTTTTTGT+TGG + chr8_2:50641003-50641022 Msa1253240:intron 20.0%
!! CTATAAATTTATTACTTCGA+AGG + chr8_2:50641459-50641478 Msa1253240:intron 20.0%
!! TTAAGAATATCACTAGAAAA+AGG - chr8_2:50642063-50642082 None:intergenic 20.0%
!! GTTAATGTTTGATACAATTA+AGG + chr8_2:50642431-50642450 Msa1253240:intron 20.0%
!!! AATTGAAACTCTAATTTTGT+AGG + chr8_2:50642786-50642805 Msa1253240:three_prime_UTR 20.0%
!!! ATTTTTTTTGTTAGAGTGAC+CGG - chr8_2:50636628-50636647 None:intergenic 25.0%
! GTCACTCTAACAAAAAAAAT+TGG + chr8_2:50636628-50636647 Msa1253240:five_prime_UTR 25.0%
! TTATCATGTTATCACCAAAT+TGG + chr8_2:50636999-50637018 Msa1253240:CDS 25.0%
! TATACAAATGGTTACAAAAC+AGG - chr8_2:50637138-50637157 None:intergenic 25.0%
! CTAAACAGAGATTATACAAA+TGG - chr8_2:50637150-50637169 None:intergenic 25.0%
! CATTTGTATAATCTCTGTTT+AGG + chr8_2:50637148-50637167 Msa1253240:intron 25.0%
!!! ATTTTTGTTGGCTATAATGA+TGG + chr8_2:50638252-50638271 Msa1253240:CDS 25.0%
!!! TTTTTGTTGGCTATAATGAT+GGG + chr8_2:50638253-50638272 Msa1253240:CDS 25.0%
! TCTGCACATTAATTAAATTC+AGG + chr8_2:50638365-50638384 Msa1253240:intron 25.0%
! TTACACATTATCATATGTTC+TGG - chr8_2:50638395-50638414 None:intergenic 25.0%
! TTATTTCACTGTGTGATATA+AGG - chr8_2:50638569-50638588 None:intergenic 25.0%
! TAAAAAGATATGTACCTGAA+TGG - chr8_2:50638718-50638737 None:intergenic 25.0%
!!! TTTTTTGCCTTAACTTAATG+CGG - chr8_2:50638768-50638787 None:intergenic 25.0%
! CATCAAATGTGTATAATACA+TGG - chr8_2:50638849-50638868 None:intergenic 25.0%
! CAATAACATTCTTTCTCTTT+AGG - chr8_2:50639419-50639438 None:intergenic 25.0%
!!! GGAAAAAAAAACAGGTTTTT+TGG + chr8_2:50639449-50639468 Msa1253240:intron 25.0%
! AATCAGCATCATAAAAGAAA+TGG - chr8_2:50639536-50639555 None:intergenic 25.0%
!! ATTTCTTTTATGATGCTGAT+TGG + chr8_2:50639535-50639554 Msa1253240:intron 25.0%
! AACCATTAGTTAAGTGTTAT+TGG + chr8_2:50639706-50639725 Msa1253240:intron 25.0%
!! ACCATTAGTTAAGTGTTATT+GGG + chr8_2:50639707-50639726 Msa1253240:intron 25.0%
! TAAGAAATAAAGCACAATAC+AGG - chr8_2:50639747-50639766 None:intergenic 25.0%
!!! AAAATATCGCTTTATTTGGA+TGG - chr8_2:50639866-50639885 None:intergenic 25.0%
!! GTGTAAAATATCGCTTTATT+TGG - chr8_2:50639870-50639889 None:intergenic 25.0%
! TACACATATTGATGTCTTAT+TGG + chr8_2:50639885-50639904 Msa1253240:intron 25.0%
! AAAACAAAAATGACAACCTT+TGG - chr8_2:50639918-50639937 None:intergenic 25.0%
! TTGAAAATCTATGGTGATAT+TGG + chr8_2:50640018-50640037 Msa1253240:intron 25.0%
! TGAAAATCTATGGTGATATT+GGG + chr8_2:50640019-50640038 Msa1253240:intron 25.0%
!!! TATCATCATGGATTATTTTC+AGG + chr8_2:50640074-50640093 Msa1253240:intron 25.0%
! AAAGCAACAAACAATGAATA+GGG - chr8_2:50640335-50640354 None:intergenic 25.0%
! AAAAGCAACAAACAATGAAT+AGG - chr8_2:50640336-50640355 None:intergenic 25.0%
! AAGGAAAGCTTATAAAAAAG+TGG - chr8_2:50640488-50640507 None:intergenic 25.0%
! AACATATAGTTAACAAGTAG+CGG - chr8_2:50640566-50640585 None:intergenic 25.0%
!!! TATTTGATTTGCTCACTTAT+AGG + chr8_2:50640736-50640755 Msa1253240:intron 25.0%
!!! AAATGCTTTACAAAAGCATT+TGG - chr8_2:50640806-50640825 None:intergenic 25.0%
!!! TTTTTTTTCTCACTCTTGTA+TGG - chr8_2:50641089-50641108 None:intergenic 25.0%
! GCAAATTTCATCAACATTTA+TGG - chr8_2:50641139-50641158 None:intergenic 25.0%
! ATGTCTTTCTTCTTTATTCA+GGG + chr8_2:50641507-50641526 Msa1253240:intron 25.0%
! TGTAATGATTCCATAGTTAA+GGG - chr8_2:50641547-50641566 None:intergenic 25.0%
! ATGTAATGATTCCATAGTTA+AGG - chr8_2:50641548-50641567 None:intergenic 25.0%
! TTAACTATGGAATCATTACA+TGG + chr8_2:50641547-50641566 Msa1253240:CDS 25.0%
! TTCCAATAAAAATTCTAGAC+AGG - chr8_2:50641641-50641660 None:intergenic 25.0%
! TTATGACTAATGAAATGTCT+TGG + chr8_2:50642007-50642026 Msa1253240:intron 25.0%
! CAACTTGAATATAAACAACT+TGG - chr8_2:50642120-50642139 None:intergenic 25.0%
! TTGATGAAATGAATTGTGAA+AGG + chr8_2:50642675-50642694 Msa1253240:exon 25.0%
! ATCCTATATACACATATAAC+TGG + chr8_2:50642741-50642760 Msa1253240:three_prime_UTR 25.0%
! AACCAGTTATATGTGTATAT+AGG - chr8_2:50642746-50642765 None:intergenic 25.0%
! GATATATTACAAATTCGACA+AGG + chr8_2:50642808-50642827 Msa1253240:three_prime_UTR 25.0%
!!! TCTTTTCAAGTATTTTTCAC+AGG - chr8_2:50642844-50642863 None:intergenic 25.0%
TAACAAACAAGTTTGGTTGT+GGG - chr8_2:50636735-50636754 None:intergenic 30.0%
!! GGTTTTGTAACAAACAAGTT+TGG - chr8_2:50636742-50636761 None:intergenic 30.0%
AAAAGATCGAAGGTTGTTAT+TGG - chr8_2:50636772-50636791 None:intergenic 30.0%
GTGATGATACAATAGAAAAG+AGG + chr8_2:50636833-50636852 Msa1253240:five_prime_UTR 30.0%
ATGATACAATAGAAAAGAGG+AGG + chr8_2:50636836-50636855 Msa1253240:five_prime_UTR 30.0%
ATCTAAGAATCGAAGCATAA+TGG + chr8_2:50636894-50636913 Msa1253240:exon 30.0%
TCTAAGAATCGAAGCATAAT+GGG + chr8_2:50636895-50636914 Msa1253240:exon 30.0%
! TGATATATGGAAAGCACATT+CGG + chr8_2:50636945-50636964 Msa1253240:CDS 30.0%
TTGTCAAATATCTGCTATTG+TGG - chr8_2:50637426-50637445 None:intergenic 30.0%
ATACTAAAGAAAAACCTGTG+TGG + chr8_2:50637557-50637576 Msa1253240:intron 30.0%
!!! ACTGCTTCCACTTATTTTTA+AGG - chr8_2:50637593-50637612 None:intergenic 30.0%
TAAAAATAAGTGGAAGCAGT+TGG + chr8_2:50637593-50637612 Msa1253240:intron 30.0%
!! GTTATAGTCTACTTTTAGTG+TGG + chr8_2:50637621-50637640 Msa1253240:intron 30.0%
TTCCACAACTTAAATCATGT+TGG - chr8_2:50637654-50637673 None:intergenic 30.0%
!! TTTAAGTTGTGGAACAATAG+TGG + chr8_2:50637660-50637679 Msa1253240:intron 30.0%
GTCATAGTTGTCAATTAAGA+AGG + chr8_2:50637795-50637814 Msa1253240:intron 30.0%
ATAGTTGTCAATTAAGAAGG+TGG + chr8_2:50637798-50637817 Msa1253240:intron 30.0%
CAATACAACATGGCATTATT+AGG - chr8_2:50637967-50637986 None:intergenic 30.0%
!! GTGACATCATTTTTCTTTCT+CGG + chr8_2:50638025-50638044 Msa1253240:intron 30.0%
ATGCTATCTTATTGATGCAT+TGG + chr8_2:50638110-50638129 Msa1253240:intron 30.0%
TTATTTGTGCTCAGGATATT+TGG + chr8_2:50638145-50638164 Msa1253240:intron 30.0%
!! TTTTGTTGGCTATAATGATG+GGG + chr8_2:50638254-50638273 Msa1253240:CDS 30.0%
! AGGAATTCTTGTATGTGTTT+TGG + chr8_2:50638485-50638504 Msa1253240:CDS 30.0%
! GGAATTCTTGTATGTGTTTT+GGG + chr8_2:50638486-50638505 Msa1253240:CDS 30.0%
! GAATTCTTGTATGTGTTTTG+GGG + chr8_2:50638487-50638506 Msa1253240:CDS 30.0%
!! AATTCTTGTATGTGTTTTGG+GGG + chr8_2:50638488-50638507 Msa1253240:CDS 30.0%
GTTAGTGGTTTAATGAATCT+TGG + chr8_2:50638624-50638643 Msa1253240:CDS 30.0%
! GATTAGACCATTTTCATGTT+GGG + chr8_2:50638646-50638665 Msa1253240:CDS 30.0%
! ATTAGACCATTTTCATGTTG+GGG + chr8_2:50638647-50638666 Msa1253240:CDS 30.0%
! TCCGTTACTTATTTGTTAAG+CGG + chr8_2:50638809-50638828 Msa1253240:intron 30.0%
!! GATTAGGTTGATGTGAAAAT+TGG - chr8_2:50638965-50638984 None:intergenic 30.0%
TGATTCTAATCTCATTGTTC+CGG - chr8_2:50639309-50639328 None:intergenic 30.0%
!! GAATGTTATTGATTTGCTGA+AGG + chr8_2:50639428-50639447 Msa1253240:intron 30.0%
TTGCTGAAGGAAAAAAAAAC+AGG + chr8_2:50639441-50639460 Msa1253240:intron 30.0%
TAGGCACTTAAGTATAAAGT+TGG - chr8_2:50639635-50639654 None:intergenic 30.0%
AAATAAAGCACAATACAGGA+GGG - chr8_2:50639743-50639762 None:intergenic 30.0%
TTTATTTGGATGGAGATGAA+CGG - chr8_2:50639856-50639875 None:intergenic 30.0%
GAAAATCTATGGTGATATTG+GGG + chr8_2:50640020-50640039 Msa1253240:intron 30.0%
GCAGGATACTTCTTTAATAT+TGG - chr8_2:50640102-50640121 None:intergenic 30.0%
ACAGCATATTCATACTTCTT+TGG + chr8_2:50640135-50640154 Msa1253240:CDS 30.0%
CAAACAATGAATAGGGAAAA+TGG - chr8_2:50640328-50640347 None:intergenic 30.0%
!! AACATTGACTCCTAAAAAGA+TGG - chr8_2:50640404-50640423 None:intergenic 30.0%
ACTTGGATCACTATGAAAAA+AGG - chr8_2:50640439-50640458 None:intergenic 30.0%
!! CACTTTTCTGTTTTTCTAAC+CGG - chr8_2:50640599-50640618 None:intergenic 30.0%
TTATTTAATCCATTCCCACT+TGG + chr8_2:50640636-50640655 Msa1253240:intron 30.0%
ATTTGCTCACTTATAGGTAT+TGG + chr8_2:50640742-50640761 Msa1253240:intron 30.0%
!! TAGTATTAAAAGTGTTCGAG+AGG - chr8_2:50640832-50640851 None:intergenic 30.0%
AGTCTTGGCATTATAATGAT+TGG + chr8_2:50640950-50640969 Msa1253240:intron 30.0%
GTCTTGGCATTATAATGATT+GGG + chr8_2:50640951-50640970 Msa1253240:intron 30.0%
! AGCAGCGTAATTTTGTAATT+CGG + chr8_2:50641026-50641045 Msa1253240:intron 30.0%
! GTTGATGAAATTTGCATGTT+AGG + chr8_2:50641144-50641163 Msa1253240:intron 30.0%
! CTTTTGAGCATGAAAAGAAT+TGG + chr8_2:50641174-50641193 Msa1253240:intron 30.0%
GACATGTTTAAGAAACAACA+TGG - chr8_2:50641492-50641511 None:intergenic 30.0%
CATGTCTTTCTTCTTTATTC+AGG + chr8_2:50641506-50641525 Msa1253240:intron 30.0%
!! CTCCTGTCTAGAATTTTTAT+TGG + chr8_2:50641636-50641655 Msa1253240:CDS 30.0%
ACAACAATGCATCAATAAGT+GGG - chr8_2:50641703-50641722 None:intergenic 30.0%
! TTTTCTGTTAGTACCTATTG+AGG - chr8_2:50641749-50641768 None:intergenic 30.0%
ACCATTAACAAAGTGACAAT+AGG - chr8_2:50641931-50641950 None:intergenic 30.0%
!! TATTGTCACTTTGTTAATGG+TGG + chr8_2:50641930-50641949 Msa1253240:intron 30.0%
TCACTAGAAAAAGGAAATCA+GGG - chr8_2:50642054-50642073 None:intergenic 30.0%
ATCACTAGAAAAAGGAAATC+AGG - chr8_2:50642055-50642074 None:intergenic 30.0%
CCTCTGGATGTTAAAAAAAT+AGG - chr8_2:50642259-50642278 None:intergenic 30.0%
!!! CCTATTTTTTTAACATCCAG+AGG + chr8_2:50642256-50642275 Msa1253240:intron 30.0%
AAAATTATTTCAGTCACCTC+TGG - chr8_2:50642275-50642294 None:intergenic 30.0%
!! AAGTTTTGTGAAGAGATTCA+GGG - chr8_2:50642606-50642625 None:intergenic 30.0%
ACTGAGAAAATGTTAACTCT+AGG - chr8_2:50642634-50642653 None:intergenic 30.0%
AATTCATTTCATCAATCCGA+AGG - chr8_2:50642670-50642689 None:intergenic 30.0%
!! GCTTTGTTTCTGAGTTAGTT+TGG - chr8_2:50636679-50636698 None:intergenic 35.0%
! ACTCAGAAACAAAGCATCAT+TGG + chr8_2:50636684-50636703 Msa1253240:five_prime_UTR 35.0%
GTAACAAACAAGTTTGGTTG+TGG - chr8_2:50636736-50636755 None:intergenic 35.0%
! AAGGTTGTTATTGGTCTGTT+GGG - chr8_2:50636763-50636782 None:intergenic 35.0%
GAGTGAATGAAAAAGATCGA+AGG - chr8_2:50636782-50636801 None:intergenic 35.0%
! ACCAAATTGGCTCTTAATGT+TGG + chr8_2:50637012-50637031 Msa1253240:CDS 35.0%
ACCAACATTAAGAGCCAATT+TGG - chr8_2:50637016-50637035 None:intergenic 35.0%
CTTTCACGAAAAAAAGCGAT+GGG - chr8_2:50637096-50637115 None:intergenic 35.0%
GCTCTAACACTATTGAATAG+TGG - chr8_2:50637254-50637273 None:intergenic 35.0%
ACTAAACTGCTATAGTGTAG+CGG - chr8_2:50637499-50637518 None:intergenic 35.0%
TAAAGAAAAACCTGTGTGGA+AGG + chr8_2:50637561-50637580 Msa1253240:intron 35.0%
AAAGAAAAACCTGTGTGGAA+GGG + chr8_2:50637562-50637581 Msa1253240:intron 35.0%
!! GACCAACATGATTTAAGTTG+TGG + chr8_2:50637649-50637668 Msa1253240:intron 35.0%
! TGCTATTTGACGATACTGAT+TGG + chr8_2:50637726-50637745 Msa1253240:intron 35.0%
ATCATCTCAAGTTTGATCCT+AGG + chr8_2:50637751-50637770 Msa1253240:intron 35.0%
GACTATACCAATAAGAAGAG+CGG - chr8_2:50637778-50637797 None:intergenic 35.0%
!!! TGGCTGCTAATTTTGTTTTC+TGG + chr8_2:50637818-50637837 Msa1253240:intron 35.0%
GAGTTAAATGTACACAATGC+TGG - chr8_2:50637844-50637863 None:intergenic 35.0%
AAAGTGCAGATGACAAGATT+AGG - chr8_2:50637926-50637945 None:intergenic 35.0%
CGTCTACATACAATACAACA+TGG - chr8_2:50637977-50637996 None:intergenic 35.0%
GTATTGTATGTAGACGTACA+CGG + chr8_2:50637981-50638000 Msa1253240:intron 35.0%
AAATGATGTCACAAAGCTCT+TGG - chr8_2:50638017-50638036 None:intergenic 35.0%
! TTTTTCTTTCTCGGACTAAC+TGG + chr8_2:50638034-50638053 Msa1253240:intron 35.0%
! TTTTCTTTCTCGGACTAACT+GGG + chr8_2:50638035-50638054 Msa1253240:intron 35.0%
! TCCGGTCTTTACATTTTTGT+TGG + chr8_2:50638240-50638259 Msa1253240:CDS 35.0%
GCCAACAAAAATGTAAAGAC+CGG - chr8_2:50638244-50638263 None:intergenic 35.0%
! TCTGTGAATGCATTTTTGTG+TGG + chr8_2:50638311-50638330 Msa1253240:intron 35.0%
!! GTGAACTTGCTAAGATATGA+AGG + chr8_2:50638447-50638466 Msa1253240:CDS 35.0%
ACTGGTAGGATATTCAGAAA+TGG + chr8_2:50638542-50638561 Msa1253240:CDS 35.0%
! GGATTAGACCATTTTCATGT+TGG + chr8_2:50638645-50638664 Msa1253240:CDS 35.0%
ATTACAGCCGCATTAAGTTA+AGG + chr8_2:50638758-50638777 Msa1253240:intron 35.0%
GCCGCTTAACAAATAAGTAA+CGG - chr8_2:50638813-50638832 None:intergenic 35.0%
TGTATAATACATGGGAGTTG+GGG - chr8_2:50638840-50638859 None:intergenic 35.0%
GTGTATAATACATGGGAGTT+GGG - chr8_2:50638841-50638860 None:intergenic 35.0%
TGTGTATAATACATGGGAGT+TGG - chr8_2:50638842-50638861 None:intergenic 35.0%
TACAAGAGTCATAGTTGTCT+GGG + chr8_2:50638871-50638890 Msa1253240:intron 35.0%
TTGATGTGAAAATTGGACCA+AGG - chr8_2:50638958-50638977 None:intergenic 35.0%
! TGCAGTCTTGTATTCATTTC+TGG - chr8_2:50639009-50639028 None:intergenic 35.0%
!! TGCACCAATTTTGATCACTT+AGG + chr8_2:50639025-50639044 Msa1253240:intron 35.0%
!! GCACCAATTTTGATCACTTA+GGG + chr8_2:50639026-50639045 Msa1253240:intron 35.0%
AGACCCTAAGTGATCAAAAT+TGG - chr8_2:50639032-50639051 None:intergenic 35.0%
! ACTAAGGGTATGTTTGGATA+AGG - chr8_2:50639237-50639256 None:intergenic 35.0%
! AAAGCATTCGAAAGGACTAA+GGG - chr8_2:50639252-50639271 None:intergenic 35.0%
CAGCATCATAAAAGAAATGG+AGG - chr8_2:50639533-50639552 None:intergenic 35.0%
ACAAGAACAGTAACCATAAG+TGG - chr8_2:50639585-50639604 None:intergenic 35.0%
CTTATGGTTACTGTTCTTGT+TGG + chr8_2:50639585-50639604 Msa1253240:intron 35.0%
AAATATATGTCCCAGCTTGA+GGG + chr8_2:50639670-50639689 Msa1253240:intron 35.0%
GCCCAATAACACTTAACTAA+TGG - chr8_2:50639711-50639730 None:intergenic 35.0%
! TAGTTAAGTGTTATTGGGCT+AGG + chr8_2:50639712-50639731 Msa1253240:intron 35.0%
GAAATAAAGCACAATACAGG+AGG - chr8_2:50639744-50639763 None:intergenic 35.0%
ACAAAAATGACAACCTTTGG+AGG - chr8_2:50639915-50639934 None:intergenic 35.0%
ATGAATATGCTGTGACAGAT+AGG - chr8_2:50640128-50640147 None:intergenic 35.0%
! ACTCCAATCAGTTGATTCAT+CGG - chr8_2:50640196-50640215 None:intergenic 35.0%
! TGAAGGTTGATTGGAAATTC+TGG - chr8_2:50640263-50640282 None:intergenic 35.0%
! TCATGACATTGAAGGTTGAT+TGG - chr8_2:50640272-50640291 None:intergenic 35.0%
!! GTAATGGAAGCCATCTTTTT+AGG + chr8_2:50640391-50640410 Msa1253240:intron 35.0%
TGGATCACTATGAAAAAAGG+TGG - chr8_2:50640436-50640455 None:intergenic 35.0%
TTTCCTCACTTGCAAAAACT+TGG - chr8_2:50640456-50640475 None:intergenic 35.0%
!! TTTTCTGTTTTTCTAACCGG+TGG - chr8_2:50640596-50640615 None:intergenic 35.0%
ACATGACATGACATATCACT+TGG - chr8_2:50640859-50640878 None:intergenic 35.0%
! GCAGCGTAATTTTGTAATTC+GGG + chr8_2:50641027-50641046 Msa1253240:intron 35.0%
! TTATTGAAAATGTCGACTGC+AGG + chr8_2:50641361-50641380 Msa1253240:intron 35.0%
TACTTGCACTCTTACACAAA+TGG - chr8_2:50641393-50641412 None:intergenic 35.0%
!!! TCCTAGATTTTAGAACTCAG+TGG + chr8_2:50641421-50641440 Msa1253240:intron 35.0%
!! ACCACTGAGTTCTAAAATCT+AGG - chr8_2:50641425-50641444 None:intergenic 35.0%
!! AGGTTGAAGCGGATTATAAA+GGG - chr8_2:50641604-50641623 None:intergenic 35.0%
TTTATAATCCGCTTCAACCT+GGG + chr8_2:50641604-50641623 Msa1253240:CDS 35.0%
TATTGGAAGTCCGATTTACA+TGG + chr8_2:50641653-50641672 Msa1253240:CDS 35.0%
ATTGGAAGTCCGATTTACAT+GGG + chr8_2:50641654-50641673 Msa1253240:CDS 35.0%
ATGTACCTTCCCATGTAAAT+CGG - chr8_2:50641666-50641685 None:intergenic 35.0%
GACAACAATGCATCAATAAG+TGG - chr8_2:50641704-50641723 None:intergenic 35.0%
!! GCCTATTGTCACTTTGTTAA+TGG + chr8_2:50641927-50641946 Msa1253240:intron 35.0%
CACTAGAAAAAGGAAATCAG+GGG - chr8_2:50642053-50642072 None:intergenic 35.0%
TTTACACAAGTTATGCATGC+AGG - chr8_2:50642214-50642233 None:intergenic 35.0%
TTGAATGTAAACACGTGCAT+TGG - chr8_2:50642350-50642369 None:intergenic 35.0%
TATTATTAGTGTCTGCGTGT+CGG + chr8_2:50642390-50642409 Msa1253240:intron 35.0%
!! TTCCTCATCATAGCTCTAAA+AGG + chr8_2:50642578-50642597 Msa1253240:CDS 35.0%
!! TCCTCATCATAGCTCTAAAA+GGG + chr8_2:50642579-50642598 Msa1253240:CDS 35.0%
!! GAAGTTTTGTGAAGAGATTC+AGG - chr8_2:50642607-50642626 None:intergenic 35.0%
! AGTCTTATCTACAAAGCCTT+CGG + chr8_2:50642651-50642670 Msa1253240:CDS 35.0%
CAATAGACATTAGCGTAGAC+CGG + chr8_2:50636606-50636625 Msa1253240:five_prime_UTR 40.0%
! GAAGGTTGTTATTGGTCTGT+TGG - chr8_2:50636764-50636783 None:intergenic 40.0%
! AATCGAAGCATAATGGGAGT+CGG + chr8_2:50636901-50636920 Msa1253240:exon 40.0%
GCAGTGGTTCAATTATTCAC+AGG + chr8_2:50636973-50636992 Msa1253240:CDS 40.0%
GTGGTTCAATTATTCACAGG+AGG + chr8_2:50636976-50636995 Msa1253240:CDS 40.0%
CCTTTCACGAAAAAAAGCGA+TGG - chr8_2:50637097-50637116 None:intergenic 40.0%
!!! CCATCGCTTTTTTTCGTGAA+AGG + chr8_2:50637094-50637113 Msa1253240:CDS 40.0%
!! TAGTGTTAGAGCGCCAATTT+TGG + chr8_2:50637262-50637281 Msa1253240:intron 40.0%
!! ATGGACTAGCACACCAAAAT+TGG - chr8_2:50637278-50637297 None:intergenic 40.0%
ATTGGATCCCTCAGATTAGT+CGG + chr8_2:50637348-50637367 Msa1253240:intron 40.0%
AAAACTCTGTATCCAGTCCA+AGG - chr8_2:50637375-50637394 None:intergenic 40.0%
TTCCCCTAAATAATGTACCC+CGG + chr8_2:50637450-50637469 Msa1253240:intron 40.0%
TTCCGGGGTACATTATTTAG+GGG - chr8_2:50637455-50637474 None:intergenic 40.0%
GTTCCGGGGTACATTATTTA+GGG - chr8_2:50637456-50637475 None:intergenic 40.0%
TGTTCCGGGGTACATTATTT+AGG - chr8_2:50637457-50637476 None:intergenic 40.0%
! TGCTATAGTGTAGCGGAATT+TGG - chr8_2:50637492-50637511 None:intergenic 40.0%
!! TACTGGAGCATTGTCTATAG+CGG - chr8_2:50637523-50637542 None:intergenic 40.0%
GGTACGGCCTTAAAAATAAG+TGG + chr8_2:50637583-50637602 Msa1253240:intron 40.0%
AAATAAGTGGAAGCAGTTGG+TGG + chr8_2:50637596-50637615 Msa1253240:intron 40.0%
TGTCACAAAGCTCTTGGTTA+GGG - chr8_2:50638011-50638030 None:intergenic 40.0%
ATGTCACAAAGCTCTTGGTT+AGG - chr8_2:50638012-50638031 None:intergenic 40.0%
TTGCTTCGTTATTTGTGCTC+AGG + chr8_2:50638137-50638156 Msa1253240:intron 40.0%
TGAATTGCAGCAGCATAAGT+TGG - chr8_2:50638211-50638230 None:intergenic 40.0%
CTTGCTAAGATATGAAGGTC+TGG + chr8_2:50638452-50638471 Msa1253240:CDS 40.0%
AAGATATGAAGGTCTGGCTA+AGG + chr8_2:50638458-50638477 Msa1253240:CDS 40.0%
CACAGTGAAATAACTGCAAG+AGG + chr8_2:50638576-50638595 Msa1253240:CDS 40.0%
ACAGAACCCCAACATGAAAA+TGG - chr8_2:50638656-50638675 None:intergenic 40.0%
AATAGGAAACTGCATGTGCA+TGG + chr8_2:50638680-50638699 Msa1253240:CDS 40.0%
!!! GGCTACTTTTCTATCCATTC+AGG + chr8_2:50638701-50638720 Msa1253240:CDS 40.0%
CTACAAGAGTCATAGTTGTC+TGG + chr8_2:50638870-50638889 Msa1253240:intron 40.0%
TTGATCACTTAGGGTCTGTT+AGG + chr8_2:50639035-50639054 Msa1253240:intron 40.0%
TGATCACTTAGGGTCTGTTA+GGG + chr8_2:50639036-50639055 Msa1253240:intron 40.0%
TGTTTGGATAAGGAGGGAAA+GGG - chr8_2:50639227-50639246 None:intergenic 40.0%
ATGTTTGGATAAGGAGGGAA+AGG - chr8_2:50639228-50639247 None:intergenic 40.0%
AGGGTATGTTTGGATAAGGA+GGG - chr8_2:50639233-50639252 None:intergenic 40.0%
! AAGGGTATGTTTGGATAAGG+AGG - chr8_2:50639234-50639253 None:intergenic 40.0%
! GAAAGGACTAAGGGTATGTT+TGG - chr8_2:50639243-50639262 None:intergenic 40.0%
!! GAAAGCATTCGAAAGGACTA+AGG - chr8_2:50639253-50639272 None:intergenic 40.0%
!! GTGACTTGAAAGCATTCGAA+AGG - chr8_2:50639260-50639279 None:intergenic 40.0%
! TCGAATGCTTTCAAGTCACA+AGG + chr8_2:50639261-50639280 Msa1253240:intron 40.0%
! AATGCTTTCAAGTCACAAGG+TGG + chr8_2:50639264-50639283 Msa1253240:intron 40.0%
ATGCACCTTTCATGTAGAAC+CGG + chr8_2:50639287-50639306 Msa1253240:intron 40.0%
TTGTTCCGGTTCTACATGAA+AGG - chr8_2:50639295-50639314 None:intergenic 40.0%
AGACCAAGAATGAGAGTAAG+AGG + chr8_2:50639381-50639400 Msa1253240:intron 40.0%
GACCAAGAATGAGAGTAAGA+GGG + chr8_2:50639382-50639401 Msa1253240:intron 40.0%
ATGGTTACTGTTCTTGTTGG+AGG + chr8_2:50639588-50639607 Msa1253240:intron 40.0%
GTTGGAATATAATCCCCTCA+AGG - chr8_2:50639617-50639636 None:intergenic 40.0%
TACTTAAGTGCCTAATGACC+AGG + chr8_2:50639641-50639660 Msa1253240:intron 40.0%
ATTTCCAATGCCTGGTCATT+AGG - chr8_2:50639654-50639673 None:intergenic 40.0%
GGACATATATTTCCAATGCC+TGG - chr8_2:50639662-50639681 None:intergenic 40.0%
GAAATATATGTCCCAGCTTG+AGG + chr8_2:50639669-50639688 Msa1253240:intron 40.0%
AATATATGTCCCAGCTTGAG+GGG + chr8_2:50639671-50639690 Msa1253240:intron 40.0%
TCTTATTGGATGACCTCCAA+AGG + chr8_2:50639899-50639918 Msa1253240:intron 40.0%
!! CTTCTTTGGAGCTTTACTGA+TGG + chr8_2:50640149-50640168 Msa1253240:CDS 40.0%
TGACCGATGAATCAACTGAT+TGG + chr8_2:50640190-50640209 Msa1253240:CDS 40.0%
ACAATGGCTCATGACATTGA+AGG - chr8_2:50640280-50640299 None:intergenic 40.0%
! GATCCAAGTTTTTGCAAGTG+AGG + chr8_2:50640450-50640469 Msa1253240:intron 40.0%
CAGAAAAGTGAACCCCATTA+TGG + chr8_2:50640609-50640628 Msa1253240:intron 40.0%
TTAATCCATTCCCACTTGGT+CGG + chr8_2:50640640-50640659 Msa1253240:intron 40.0%
!! AAAGCTTTTTCCGACCAAGT+GGG - chr8_2:50640653-50640672 None:intergenic 40.0%
GTGACAAATAATGCCAAGAC+TGG - chr8_2:50640920-50640939 None:intergenic 40.0%
! AATGCCAAGACTAGTTGCTT+AGG - chr8_2:50640942-50640961 None:intergenic 40.0%
AATGTTGCATTCACTCCAGT+CGG + chr8_2:50641220-50641239 Msa1253240:intron 40.0%
ATAATCGAGATCTCAGCTGT+AGG - chr8_2:50641345-50641364 None:intergenic 40.0%
ATTGCATCTGCCCTTAACTA+TGG + chr8_2:50641534-50641553 Msa1253240:CDS 40.0%
TACATGGAGCAACAAGATCT+TGG + chr8_2:50641563-50641582 Msa1253240:CDS 40.0%
ACATGGAGCAACAAGATCTT+GGG + chr8_2:50641564-50641583 Msa1253240:CDS 40.0%
!! CAGGTTGAAGCGGATTATAA+AGG - chr8_2:50641605-50641624 None:intergenic 40.0%
CTTTATAATCCGCTTCAACC+TGG + chr8_2:50641603-50641622 Msa1253240:CDS 40.0%
TTATAATCCGCTTCAACCTG+GGG + chr8_2:50641605-50641624 Msa1253240:CDS 40.0%
! TTTTCGACGAACTCCTCAAT+AGG + chr8_2:50641733-50641752 Msa1253240:intron 40.0%
ATTGGTATCGTGAAGGATGT+CGG - chr8_2:50642332-50642351 None:intergenic 40.0%
CTAAGACACTGTTGTCATCA+TGG - chr8_2:50642480-50642499 None:intergenic 40.0%
CATGATGACAACAGTGTCTT+AGG + chr8_2:50642478-50642497 Msa1253240:intron 40.0%
GGTGGATCTCTAATCATCAT+TGG + chr8_2:50642499-50642518 Msa1253240:CDS 40.0%
! AATCATCATTGGTCTGTACG+CGG + chr8_2:50642510-50642529 Msa1253240:CDS 40.0%
GGCATCATATAGAGAAAGAC+AGG + chr8_2:50642540-50642559 Msa1253240:CDS 40.0%
GCTATGATGAGGAATAACTC+CGG - chr8_2:50642572-50642591 None:intergenic 40.0%
!!! ACCCTTTTAGAGCTATGATG+AGG - chr8_2:50642583-50642602 None:intergenic 40.0%
GAGGAGGGAATGGTGATATA+TGG + chr8_2:50636932-50636951 Msa1253240:CDS 45.0%
!! CTTTGCTCTGGCTTTGAATG+CGG + chr8_2:50637304-50637323 Msa1253240:intron 45.0%
AATGTACCCCGGAACAATAG+CGG + chr8_2:50637461-50637480 Msa1253240:intron 45.0%
TGGACAAACCGCTATTGTTC+CGG - chr8_2:50637472-50637491 None:intergenic 45.0%
AAAACCTGTGTGGAAGGGTA+CGG + chr8_2:50637567-50637586 Msa1253240:intron 45.0%
GTCACAAAGCTCTTGGTTAG+GGG - chr8_2:50638010-50638029 None:intergenic 45.0%
TTTCTCGGACTAACTGGGTA+AGG + chr8_2:50638040-50638059 Msa1253240:intron 45.0%
AATGTAAAGACCGGAGTAGC+TGG - chr8_2:50638235-50638254 None:intergenic 45.0%
TATGAAGGTCTGGCTAAGGT+TGG + chr8_2:50638462-50638481 Msa1253240:CDS 45.0%
ACGGTACAAAACCATCACCA+AGG - chr8_2:50638514-50638533 None:intergenic 45.0%
!!! TTGGTGATGGTTTTGTACCG+TGG + chr8_2:50638513-50638532 Msa1253240:CDS 45.0%
TCTGAATATCCTACCAGTGC+TGG - chr8_2:50638540-50638559 None:intergenic 45.0%
CCACTAACTAACCATCCAGA+TGG - chr8_2:50638612-50638631 None:intergenic 45.0%
! CCATCTGGATGGTTAGTTAG+TGG + chr8_2:50638609-50638628 Msa1253240:CDS 45.0%
GTTGGGGTTCTGTGCTTAAT+AGG + chr8_2:50638663-50638682 Msa1253240:CDS 45.0%
TAAGTCGAGCAGGTGTGATT+AGG - chr8_2:50638981-50639000 None:intergenic 45.0%
!! GTTTTTGGAGGGTAGGACTT+TGG + chr8_2:50639063-50639082 Msa1253240:intron 45.0%
TGCCCTCTTACTCTCATTCT+TGG - chr8_2:50639387-50639406 None:intergenic 45.0%
GGTTACTGGAGATCCACTTA+TGG + chr8_2:50639569-50639588 Msa1253240:intron 45.0%
TCTTGTTGGAGGTAACCTTG+AGG + chr8_2:50639599-50639618 Msa1253240:intron 45.0%
CTTGTTGGAGGTAACCTTGA+GGG + chr8_2:50639600-50639619 Msa1253240:intron 45.0%
TTGTTGGAGGTAACCTTGAG+GGG + chr8_2:50639601-50639620 Msa1253240:intron 45.0%
TCTGAAAATCCCCTCAAGCT+GGG - chr8_2:50639683-50639702 None:intergenic 45.0%
! TTCTGAAAATCCCCTCAAGC+TGG - chr8_2:50639684-50639703 None:intergenic 45.0%
GATGGAGATGAACGGATATG+GGG - chr8_2:50639848-50639867 None:intergenic 45.0%
GGATGGAGATGAACGGATAT+GGG - chr8_2:50639849-50639868 None:intergenic 45.0%
TGGATGGAGATGAACGGATA+TGG - chr8_2:50639850-50639869 None:intergenic 45.0%
! GTTTTTCTAACCGGTGGAAG+TGG - chr8_2:50640590-50640609 None:intergenic 45.0%
! TTTTTCCGACCAAGTGGGAA+TGG - chr8_2:50640648-50640667 None:intergenic 45.0%
!! CAAAGCTTTTTCCGACCAAG+TGG - chr8_2:50640654-50640673 None:intergenic 45.0%
CACTTGGTCGGAAAAAGCTT+TGG + chr8_2:50640652-50640671 Msa1253240:intron 45.0%
GTTGCTTAGGTCACAAACTG+TGG - chr8_2:50640898-50640917 None:intergenic 45.0%
! AATGCCAAGACTGGTTGCTT+AGG - chr8_2:50640911-50640930 None:intergenic 45.0%
! GTCACCTAAGCAACTAGTCT+TGG + chr8_2:50640935-50640954 Msa1253240:intron 45.0%
AGAAACCACCAGAGCATATC+AGG - chr8_2:50641056-50641075 None:intergenic 45.0%
TTCGCAACTGCAGAGAACTT+GGG - chr8_2:50641201-50641220 None:intergenic 45.0%
TTTCGCAACTGCAGAGAACT+TGG - chr8_2:50641202-50641221 None:intergenic 45.0%
CTCAGCTGTAGGATCAAGAT+CGG - chr8_2:50641334-50641353 None:intergenic 45.0%
TATAAAGGGCAACCATGGCT+GGG - chr8_2:50641590-50641609 None:intergenic 45.0%
TTATAAAGGGCAACCATGGC+TGG - chr8_2:50641591-50641610 None:intergenic 45.0%
CGGATTATAAAGGGCAACCA+TGG - chr8_2:50641595-50641614 None:intergenic 45.0%
GAAGTCCGATTTACATGGGA+AGG + chr8_2:50641658-50641677 Msa1253240:CDS 45.0%
GATGACAACAGTGTCTTAGG+TGG + chr8_2:50642481-50642500 Msa1253240:intron 45.0%
! AGCATAATGGGAGTCGGAGT+CGG + chr8_2:50636907-50636926 Msa1253240:exon 50.0%
! ATGGAAAGCACATTCGGCGA+TGG + chr8_2:50636951-50636970 Msa1253240:CDS 50.0%
GTCCATACACAGCTTTGCTC+TGG + chr8_2:50637292-50637311 Msa1253240:intron 50.0%
AGCCAGAGCAAAGCTGTGTA+TGG - chr8_2:50637297-50637316 None:intergenic 50.0%
CCAAGGACCGACTAATCTGA+GGG - chr8_2:50637358-50637377 None:intergenic 50.0%
TCCAAGGACCGACTAATCTG+AGG - chr8_2:50637359-50637378 None:intergenic 50.0%
! AGATTAGTCGGTCCTTGGAC+TGG + chr8_2:50637360-50637379 Msa1253240:intron 50.0%
GACAAACCGCTATTGTTCCG+GGG - chr8_2:50637470-50637489 None:intergenic 50.0%
GGACAAACCGCTATTGTTCC+GGG - chr8_2:50637471-50637490 None:intergenic 50.0%
CCAATAAGAAGAGCGGTCCT+AGG - chr8_2:50637771-50637790 None:intergenic 50.0%
CCTAGGACCGCTCTTCTTAT+TGG + chr8_2:50637768-50637787 Msa1253240:intron 50.0%
ACAAAGCTCTTGGTTAGGGG+CGG - chr8_2:50638007-50638026 None:intergenic 50.0%
TGCAATTCAGCCAGCTACTC+CGG + chr8_2:50638222-50638241 Msa1253240:CDS 50.0%
!!! TGTATGTGTTTTGGGGGCCT+TGG + chr8_2:50638494-50638513 Msa1253240:CDS 50.0%
ACTAACCATCCAGATGGCTC+TGG - chr8_2:50638606-50638625 None:intergenic 50.0%
AGAGTCATAGTTGTCTGGGC+TGG + chr8_2:50638875-50638894 Msa1253240:intron 50.0%
CAGCTGGAAAACCTGCAAAC+TGG + chr8_2:50638909-50638928 Msa1253240:intron 50.0%
CTCTAAACAGACTGCCATGG+AGG - chr8_2:50638935-50638954 None:intergenic 50.0%
!! AGGCTCTAAACAGACTGCCA+TGG - chr8_2:50638938-50638957 None:intergenic 50.0%
! TGGCAGTCTGTTTAGAGCCT+TGG + chr8_2:50638938-50638957 Msa1253240:intron 50.0%
TCACTTAGGGTCTGTTAGGG+AGG + chr8_2:50639039-50639058 Msa1253240:intron 50.0%
CACTTAGGGTCTGTTAGGGA+GGG + chr8_2:50639040-50639059 Msa1253240:intron 50.0%
ACTTAGGGTCTGTTAGGGAG+GGG + chr8_2:50639041-50639060 Msa1253240:intron 50.0%
! GTCTGTTAGGGAGGGGTTTT+TGG + chr8_2:50639048-50639067 Msa1253240:intron 50.0%
!! TGTTAGGGAGGGGTTTTTGG+AGG + chr8_2:50639051-50639070 Msa1253240:intron 50.0%
!! GTTAGGGAGGGGTTTTTGGA+GGG + chr8_2:50639052-50639071 Msa1253240:intron 50.0%
TTTGGAGGGTAGGACTTTGG+AGG + chr8_2:50639066-50639085 Msa1253240:intron 50.0%
TTGGAGGGTAGGACTTTGGA+GGG + chr8_2:50639067-50639086 Msa1253240:intron 50.0%
TGGATAAGGAGGGAAAGGGA+GGG - chr8_2:50639223-50639242 None:intergenic 50.0%
TTGGATAAGGAGGGAAAGGG+AGG - chr8_2:50639224-50639243 None:intergenic 50.0%
! TGCTGATTGGACGAATCCTC+TGG + chr8_2:50639548-50639567 Msa1253240:intron 50.0%
TGGACGAATCCTCTGGTTAC+TGG + chr8_2:50639555-50639574 Msa1253240:intron 50.0%
AGTGGATCTCCAGTAACCAG+AGG - chr8_2:50639567-50639586 None:intergenic 50.0%
AGTGCCTAATGACCAGGCAT+TGG + chr8_2:50639647-50639666 Msa1253240:intron 50.0%
GCTGTGACAGATAGGTTTGC+AGG - chr8_2:50640120-50640139 None:intergenic 50.0%
GTGACCTAAGCAACCAGTCT+TGG + chr8_2:50640904-50640923 Msa1253240:intron 50.0%
TCGGGTTTCCTGATATGCTC+TGG + chr8_2:50641045-50641064 Msa1253240:intron 50.0%
GGTTTCCTGATATGCTCTGG+TGG + chr8_2:50641048-50641067 Msa1253240:intron 50.0%
TAAACCGACGCGTGTGAAAC+AGG + chr8_2:50641113-50641132 Msa1253240:intron 50.0%
TCACTCCAGTCGGTGAATGT+TGG + chr8_2:50641230-50641249 Msa1253240:intron 50.0%
AACAGCCAACATTCACCGAC+TGG - chr8_2:50641238-50641257 None:intergenic 50.0%
! AGTCGGTGAATGTTGGCTGT+TGG + chr8_2:50641237-50641256 Msa1253240:intron 50.0%
! GGTGAATGTTGGCTGTTGGA+TGG + chr8_2:50641241-50641260 Msa1253240:intron 50.0%
GTTGGCTGTTGGATGGAGAT+CGG + chr8_2:50641248-50641267 Msa1253240:intron 50.0%
! CACGTGCATTGGTATCGTGA+AGG - chr8_2:50642339-50642358 None:intergenic 50.0%
TTGGTCTGTACGCGGTTACT+TGG + chr8_2:50642518-50642537 Msa1253240:CDS 50.0%
TGGTCTGTACGCGGTTACTT+GGG + chr8_2:50642519-50642538 Msa1253240:CDS 50.0%
! ATAATGGGAGTCGGAGTCGG+AGG + chr8_2:50636910-50636929 Msa1253240:exon 55.0%
! CCCTCAGATTAGTCGGTCCT+TGG + chr8_2:50637355-50637374 Msa1253240:intron 55.0%
GAAGGTCTGGCTAAGGTTGG+AGG + chr8_2:50638465-50638484 Msa1253240:CDS 55.0%
!!! TGTTTTGGGGGCCTTGGTGA+TGG + chr8_2:50638500-50638519 Msa1253240:CDS 55.0%
TTTGTACCGTGGTCCAGCAC+TGG + chr8_2:50638524-50638543 Msa1253240:CDS 55.0%
! ATCCTACCAGTGCTGGACCA+CGG - chr8_2:50638533-50638552 None:intergenic 55.0%
AGAGGTCAACCAGAGCCATC+TGG + chr8_2:50638594-50638613 Msa1253240:CDS 55.0%
GTCAACCAGAGCCATCTGGA+TGG + chr8_2:50638598-50638617 Msa1253240:CDS 55.0%
! GGTTTTCCAGCTGAGCCATC+TGG - chr8_2:50638902-50638921 None:intergenic 55.0%
! AACCTGCAAACTGGCCTCCA+TGG + chr8_2:50638918-50638937 Msa1253240:intron 55.0%
TCTGGTCGACTAAGTCGAGC+AGG - chr8_2:50638991-50639010 None:intergenic 55.0%
GGATAAGGAGGGAAAGGGAG+GGG - chr8_2:50639222-50639241 None:intergenic 55.0%
ATGGCCTGTTTCACACGCGT+CGG - chr8_2:50641120-50641139 None:intergenic 55.0%
TAATCCGCTTCAACCTGGGG+CGG + chr8_2:50641608-50641627 Msa1253240:CDS 55.0%
AGAGAAAGACAGGCAGCTGC+CGG + chr8_2:50642550-50642569 Msa1253240:CDS 55.0%
AGCACATTCGGCGATGGCAG+TGG + chr8_2:50636957-50636976 Msa1253240:CDS 60.0%
TTGAATGCGGCCCTCGCAAG+TGG + chr8_2:50637317-50637336 Msa1253240:intron 60.0%
ATCCCACCGTCCACTTGCGA+GGG - chr8_2:50637330-50637349 None:intergenic 60.0%
AATCCCACCGTCCACTTGCG+AGG - chr8_2:50637331-50637350 None:intergenic 60.0%
TCGCAAGTGGACGGTGGGAT+TGG + chr8_2:50637330-50637349 Msa1253240:intron 60.0%
AAGGCCGTACCCTTCCACAC+AGG - chr8_2:50637574-50637593 None:intergenic 60.0%
!! TACCGTGGTCCAGCACTGGT+AGG + chr8_2:50638528-50638547 Msa1253240:CDS 60.0%
! GTTGTCTGGGCTGGACCAGA+TGG + chr8_2:50638884-50638903 Msa1253240:intron 60.0%
TGCCATGGAGGCCAGTTTGC+AGG - chr8_2:50638923-50638942 None:intergenic 60.0%
!! GGGAGGGGTTTTTGGAGGGT+AGG + chr8_2:50639056-50639075 Msa1253240:intron 60.0%
AAGGAGGGAAAGGGAGGGGA+GGG - chr8_2:50639218-50639237 None:intergenic 60.0%
TAAGGAGGGAAAGGGAGGGG+AGG - chr8_2:50639219-50639238 None:intergenic 60.0%
CAAGATCTTGGGCCCAGCCA+TGG + chr8_2:50641575-50641594 Msa1253240:CDS 60.0%
ATGGGAGTCGGAGTCGGAGG+AGG + chr8_2:50636913-50636932 Msa1253240:CDS 65.0%
GAGTCGGAGTCGGAGGAGGA+GGG + chr8_2:50636917-50636936 Msa1253240:CDS 65.0%
GGAGTCGGAGGAGGAGGGAA+TGG + chr8_2:50636922-50636941 Msa1253240:CDS 65.0%
ATGCGGCCCTCGCAAGTGGA+CGG + chr8_2:50637321-50637340 Msa1253240:intron 65.0%
GCTGGACCAGATGGCTCAGC+TGG + chr8_2:50638893-50638912 Msa1253240:intron 65.0%
GGAGTCGGAGTCGGAGGAGG+AGG + chr8_2:50636916-50636935 Msa1253240:CDS 70.0%
GGCCCTCGCAAGTGGACGGT+GGG + chr8_2:50637325-50637344 Msa1253240:intron 70.0%
! GCAGCCGCCCCAGGTTGAAG+CGG - chr8_2:50641615-50641634 None:intergenic 70.0%
CGGCCCTCGCAAGTGGACGG+TGG + chr8_2:50637324-50637343 Msa1253240:intron 75.0%
GACAGGAGAGCAGCCGCCCC+AGG - chr8_2:50641624-50641643 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 50636587 50642896 50636587 ID=Msa1253240;Name=Msa1253240
chr8_2 mRNA 50636587 50642896 50636587 ID=Msa1253240-mRNA-1;Parent=Msa1253240;Name=Msa1253240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=326|0.8|1|1|1|1|6|218|366
chr8_2 exon 50636587 50637115 50636587 ID=Msa1253240-mRNA-1:exon:15434;Parent=Msa1253240-mRNA-1
chr8_2 exon 50638159 50638275 50638159 ID=Msa1253240-mRNA-1:exon:15435;Parent=Msa1253240-mRNA-1
chr8_2 exon 50638437 50638722 50638437 ID=Msa1253240-mRNA-1:exon:15436;Parent=Msa1253240-mRNA-1
chr8_2 exon 50640096 50640251 50640096 ID=Msa1253240-mRNA-1:exon:15437;Parent=Msa1253240-mRNA-1
chr8_2 exon 50641528 50641679 50641528 ID=Msa1253240-mRNA-1:exon:15438;Parent=Msa1253240-mRNA-1
chr8_2 exon 50642492 50642896 50642492 ID=Msa1253240-mRNA-1:exon:15439;Parent=Msa1253240-mRNA-1
chr8_2 five_prime_UTR 50636587 50636912 50636587 ID=Msa1253240-mRNA-1:five_prime_utr;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50636913 50637115 50636913 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50638159 50638275 50638159 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50638437 50638722 50638437 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50640096 50640251 50640096 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50641528 50641679 50641528 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 CDS 50642492 50642678 50642492 ID=Msa1253240-mRNA-1:cds;Parent=Msa1253240-mRNA-1
chr8_2 three_prime_UTR 50642679 50642896 50642679 ID=Msa1253240-mRNA-1:three_prime_utr;Parent=Msa1253240-mRNA-1
Gene Sequence

>Msa1253240

ATGGGAGTCGGAGTCGGAGGAGGAGGGAATGGTGATATATGGAAAGCACATTCGGCGATGGCAGTGGTTCAATTATTCACAGGAGGTTATCATGTTATCACCAAATTGGCTCTTAATGTTGGTGTTAATCAAATCGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCCATCGCTTTTTTTCGTGAAAGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCGGTCTTTACATTTTTGTTGGCTATAATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCTAAGGTTGGAGGAATTCTTGTATGTGTTTTGGGGGCCTTGGTGATGGTTTTGTACCGTGGTCCAGCACTGGTAGGATATTCAGAAATGGACCTTATATCACACAGTGAAATAACTGCAAGAGGTCAACCAGAGCCATCTGGATGGTTAGTTAGTGGTTTAATGAATCTTGGATTAGACCATTTTCATGTTGGGGTTCTGTGCTTAATAGGAAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCAATATTAAAGAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTGACCGATGAATCAACTGATTGGAGTTTGACACAGTCTGAAACATTTGCTGTTTTATATGCTGGAATTATTGCATCTGCCCTTAACTATGGAATCATTACATGGAGCAACAAGATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCGCTTCAACCTGGGGCGGCTGCTCTCCTGTCTAGAATTTTTATTGGAAGTCCGATTTACATGGGAAGTGTCTTAGGTGGATCTCTAATCATCATTGGTCTGTACGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCCGGAGTTATTCCTCATCATAGCTCTAAAAGGGTCCCTGAATCTCTTCACAAAACTTCATTTCCTAGAGTTAACATTTTCTCAGTCTTATCTACAAAGCCTTCGGATTGA
Protein sequence

>Msa1253240

MGVGVGGGGNGDIWKAHSAMAVVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAIMMGTERVNLLRYEGLAKVGGILVCVLGALVMVLYRGPALVGYSEMDLISHSEITARGQPEPSGWLVSGLMNLGLDHFHVGVLCLIGNCMCMATFLSIQAPILKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIIIGLYAVTWASYRERQAAAGVIPHHSSKRVPESLHKTSFPRVNIFSVLSTKPSD*