AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1202510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202510 MtrunA17_Chr8g0372721 96.026 755 28 2 1 755 1 753 0.0 1476
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202510 AT5G66420.2 72.473 752 197 6 10 754 5 753 0.0 1023
Msa1202510 AT5G66420.1 75.799 657 153 4 101 754 1 654 0.0 936
Msa1202510 AT5G66420.3 70.340 617 174 5 10 620 5 618 0.0 816

Find 213 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGTCTCTTAGGGTGTTT+TGG 0.175673 8_1:+56132812 Msa1202510:intron
GCCTCTTCTGGACCAGAAAT+TGG 0.181704 8_1:-56136720 None:intergenic
TGGACATGTTGGACAGTTTC+AGG 0.191901 8_1:-56133759 None:intergenic
CAGTAGACTCCACCTGTTTA+AGG 0.197887 8_1:-56135355 None:intergenic
GATAAAGGAATTCCTATAAT+TGG 0.203295 8_1:+56134261 Msa1202510:CDS
GTATGAGAGAACTTCGTTTC+TGG 0.209114 8_1:-56131405 None:intergenic
GAATATGCAGGCCCAATTTC+TGG 0.220621 8_1:+56136708 Msa1202510:intron
ATTAAAATCTTGTTGAATAG+TGG 0.228395 8_1:-56131168 None:intergenic
TTGGAAGGATTCGGAGTTTA+GGG 0.234485 8_1:+56131783 Msa1202510:CDS
GTGGAGTCTACTGGGTTCTC+TGG 0.235907 8_1:+56135365 Msa1202510:CDS
TTCTGATTTAGTGTTGTTTC+CGG 0.241724 8_1:+56131679 Msa1202510:CDS
GTACGCTACATTGCTAATAA+TGG 0.278889 8_1:+56136918 Msa1202510:three_prime_UTR
GTTGGAAGGATTCGGAGTTT+AGG 0.281805 8_1:+56131782 Msa1202510:CDS
AATATAAATTCTGCCTCTTC+TGG 0.285209 8_1:-56136732 None:intergenic
ATGCTACTGGGGTTGGTGGT+AGG 0.296691 8_1:+56131927 Msa1202510:CDS
TAAAGAGGGTTATGAGAGTT+TGG 0.306047 8_1:+56131898 Msa1202510:CDS
GTTGCCTCTGGATCATAAAA+AGG 0.311577 8_1:-56133451 None:intergenic
CCAGCACCAGCTCCAATTAT+AGG 0.313229 8_1:-56134273 None:intergenic
TCAGGGCGCTTCCGGATGGC+TGG 0.318709 8_1:+56134357 Msa1202510:CDS
CTTAAACAGGTGGAGTCTAC+TGG 0.319723 8_1:+56135356 Msa1202510:CDS
CGATATTATTGTAGCTCATA+TGG 0.329891 8_1:+56135659 Msa1202510:CDS
ATCGTTCACTTCTCTTCCAC+TGG 0.330759 8_1:+56131595 Msa1202510:CDS
TGGCACAACACAATGGCATT+AGG 0.331657 8_1:-56135783 None:intergenic
CCGGCGATTGTTGATGTTGC+CGG 0.336777 8_1:+56131698 Msa1202510:CDS
GTTTCGAATAAATCAAGCTT+TGG 0.339409 8_1:+56133792 Msa1202510:CDS
TGGAGTCTACTGGGTTCTCT+GGG 0.339675 8_1:+56135366 Msa1202510:CDS
AGGCAAAATCTTGAAGAAAC+AGG 0.342704 8_1:+56135431 Msa1202510:CDS
GGCGATGCTCTGATCGGAAT+TGG 0.348691 8_1:-56131525 None:intergenic
TATTCGAAACAGAACCTTCA+TGG 0.349418 8_1:-56133779 None:intergenic
GTGAAATCTGGTGAAGGTTT+TGG 0.353239 8_1:-56131374 None:intergenic
TTCGTTGAGCTTAGTGTCTA+AGG 0.353826 8_1:-56131243 None:intergenic
TTTCGAATAAATCAAGCTTT+GGG 0.363828 8_1:+56133793 Msa1202510:CDS
CAATGCTGCTGCTGCTTTCG+CGG 0.366932 8_1:+56131751 Msa1202510:CDS
TGTACAACTCAGGGCGCTTC+CGG 0.367533 8_1:+56134349 Msa1202510:CDS
CCTATAATTGGAGCTGGTGC+TGG 0.368558 8_1:+56134273 Msa1202510:CDS
GACGACGACGATGTCGAGTT+TGG 0.370363 8_1:-56131327 None:intergenic
CAGTTTATTTGCTATAAAAT+CGG 0.373046 8_1:-56133356 None:intergenic
ACGACGACGATGTCGAGTTT+GGG 0.373119 8_1:-56131326 None:intergenic
ATTTCTATTGGCAGAAACTT+TGG 0.377740 8_1:+56134197 Msa1202510:intron
ACTGTTGGTATAACTATGTT+TGG 0.381548 8_1:+56131833 Msa1202510:CDS
CCTCTTCTGGACCAGAAATT+GGG 0.387845 8_1:-56136719 None:intergenic
TTTAAAGATCAAATAGATAA+AGG 0.388535 8_1:+56134246 Msa1202510:CDS
GCTTTCGCGGGGATGGTAGT+TGG 0.393619 8_1:+56131764 Msa1202510:CDS
CGGTTGAAACAATGAGCTTC+GGG 0.395860 8_1:-56131622 None:intergenic
ATCGGAGAAGCGGTGGAGAT+TGG 0.396280 8_1:-56131294 None:intergenic
CAGAGCATCGCCGGAGTTAT+CGG 0.396375 8_1:+56131536 Msa1202510:CDS
TTGAAGTGCTTGGCTCATTA+CGG 0.400952 8_1:-56131486 None:intergenic
AATGCTGCTGCTGCTTTCGC+GGG 0.402218 8_1:+56131752 Msa1202510:CDS
TGCTGCTGCTTTCGCGGGGA+TGG 0.405453 8_1:+56131757 Msa1202510:CDS
GATTAGAGAGGGGTTTATAC+AGG 0.412056 8_1:+56131964 Msa1202510:CDS
TGCTACTGGGGTTGGTGGTA+GGG 0.413980 8_1:+56131928 Msa1202510:CDS
TCCTCCAGCTTCTTCAAACT+TGG 0.422732 8_1:-56134310 None:intergenic
GGCACAACACAATGGCATTA+GGG 0.426072 8_1:-56135782 None:intergenic
TGGGGTTGGTGGTAGGGCTA+TGG 0.428818 8_1:+56131934 Msa1202510:CDS
ATTCAAGGTCATTGATATGA+TGG 0.430606 8_1:-56133656 None:intergenic
TCAACATGAAGCTATTGAAA+TGG 0.430609 8_1:+56135623 Msa1202510:CDS
AAGAAGGTACCTGTTCTTGC+TGG 0.431071 8_1:+56135293 Msa1202510:CDS
AAGAAACAGGAATGGGATAC+AGG 0.432948 8_1:+56135444 Msa1202510:CDS
GGAAAGACTACCCGTGGAAC+AGG 0.433432 8_1:+56136800 Msa1202510:CDS
TCGTGTTTGCCTTCCAGAAA+AGG 0.434590 8_1:+56133399 Msa1202510:CDS
TCATGTTGATTGAATGCATA+AGG 0.435197 8_1:-56135609 None:intergenic
GGATGGTAGTTGGAAGGATT+CGG 0.439718 8_1:+56131774 Msa1202510:CDS
ATTGGAGCTGGTGCTGGGAC+CGG 0.439807 8_1:+56134279 Msa1202510:CDS
TTGCCTCTGTCTTGTGGAAG+AGG 0.440747 8_1:-56131455 None:intergenic
CATATGAGCTACAATAATAT+CGG 0.442867 8_1:-56135658 None:intergenic
CTAGTGCATTTGCAAATTCA+AGG 0.443766 8_1:-56133671 None:intergenic
GCATTAGACATGGTGAACTT+TGG 0.447128 8_1:+56132948 Msa1202510:CDS
TTCCAACGTAAGGTTCCGTT+TGG 0.447456 8_1:-56131655 None:intergenic
TTTCTTTGCTGAAAACTCTC+TGG 0.449471 8_1:-56132987 None:intergenic
TTATAGCAAATAAACTGAAC+AGG 0.450455 8_1:+56133362 Msa1202510:CDS
ACGGTTGAAACAATGAGCTT+CGG 0.451533 8_1:-56131623 None:intergenic
CGCTTCCGGATGGCTGGGAG+AGG 0.452905 8_1:+56134363 Msa1202510:CDS
GAGGTAGCAGACTACATAGT+TGG 0.454554 8_1:+56132849 Msa1202510:CDS
TTCCGTTTGGCCACTAGCTA+CGG 0.457357 8_1:-56131642 None:intergenic
GCTGGGAGAGGTTCATTAGC+AGG 0.457648 8_1:+56134375 Msa1202510:CDS
GTTATCGGCGTTGGCGGTAG+CGG 0.458736 8_1:+56131551 Msa1202510:CDS
GCAGTGTTGATAACTGAGTT+AGG 0.461631 8_1:-56137077 None:intergenic
AATGGATCACTTCCTTAAAC+AGG 0.464135 8_1:+56135343 Msa1202510:CDS
AAGAGGCGTGGTGGCTGTGT+CGG 0.464483 8_1:-56131438 None:intergenic
CCAACTGTTGGGTTGTATGA+TGG 0.465653 8_1:+56135401 Msa1202510:CDS
TTCAAACTTGGCAGATATCC+CGG 0.468179 8_1:-56134298 None:intergenic
CATATGGGTCTAACCACAAC+AGG 0.468956 8_1:+56135675 Msa1202510:CDS
ATGGAGAATTTGATTAGAGA+GGG 0.469127 8_1:+56131953 Msa1202510:CDS
ACATACCGGCAAAACTTCAT+TGG 0.469735 8_1:-56134442 None:intergenic
TGCTTGGCTCATTACGGAAA+CGG 0.470622 8_1:-56131480 None:intergenic
CTACATAGTTGGAGGTGTAA+TGG 0.471501 8_1:+56132860 Msa1202510:CDS
CGTGTTTGCCTTCCAGAAAA+GGG 0.477764 8_1:+56133400 Msa1202510:CDS
CTGGAGATGAATGTGAAATC+TGG 0.480275 8_1:-56131386 None:intergenic
GTGTTGATGCTGTTAGAGAT+AGG 0.480492 8_1:+56131870 Msa1202510:CDS
TTTCATGCTACTGGGGTTGG+TGG 0.481155 8_1:+56131923 Msa1202510:CDS
GTAAGAAATGTTGAAGTGCT+TGG 0.484412 8_1:-56131496 None:intergenic
TTGGAGCTGGTGCTGGGACC+GGG 0.488582 8_1:+56134280 Msa1202510:CDS
ACGGCTTTGCCTCTGTCTTG+TGG 0.488610 8_1:-56131461 None:intergenic
TTGCTGAAAACTCTCTGGTA+TGG 0.489290 8_1:-56132982 None:intergenic
GAAATGACGAAGCAAATGTA+AGG 0.490850 8_1:+56136990 Msa1202510:three_prime_UTR
CTATAATTGGAGCTGGTGCT+GGG 0.491055 8_1:+56134274 Msa1202510:CDS
GAGATTGGAGCGGAGTGAAT+CGG 0.491499 8_1:-56131279 None:intergenic
GCCGGAGTTATCGGCGTTGG+CGG 0.491993 8_1:+56131545 Msa1202510:CDS
TTAAATTGACAGCTTGGAAG+TGG 0.492050 8_1:+56135545 Msa1202510:intron
AAGAATAAAGTGCAAGTGAT+GGG 0.494926 8_1:+56137023 Msa1202510:three_prime_UTR
TTTGCATCTGGGAATTCACT+AGG 0.496951 8_1:-56133831 None:intergenic
AGAGATAGGTTGCATAAAGA+GGG 0.499545 8_1:+56131884 Msa1202510:CDS
GCACACACACCAGCAAGAAC+AGG 0.500979 8_1:-56135302 None:intergenic
TTAAAATCTTGTTGAATAGT+GGG 0.501359 8_1:-56131167 None:intergenic
CAGGGCGCTTCCGGATGGCT+GGG 0.503971 8_1:+56134358 Msa1202510:CDS
CTCTATTATGACATCAAAGC+GGG 0.511978 8_1:-56132895 None:intergenic
AGAAGTACACCAGTTGCCTC+TGG 0.512364 8_1:-56133463 None:intergenic
ATGAACCTCTCCCAGCCATC+CGG 0.512584 8_1:-56134368 None:intergenic
TCTGCCAAGTTTGAAGAAGC+TGG 0.514940 8_1:+56134306 Msa1202510:CDS
TAGAGATAGGTTGCATAAAG+AGG 0.515466 8_1:+56131883 Msa1202510:CDS
AACCGTAGCTAGTGGCCAAA+CGG 0.517646 8_1:+56131640 Msa1202510:CDS
GTTGATGATAAGTTTACTGT+TGG 0.517901 8_1:+56131818 Msa1202510:CDS
TTCAAGGTCATTGATATGAT+GGG 0.519290 8_1:-56133655 None:intergenic
TCGTTCACTTCTCTTCCACT+GGG 0.520818 8_1:+56131596 Msa1202510:CDS
GATATTATTGTAGCTCATAT+GGG 0.522146 8_1:+56135660 Msa1202510:CDS
TATTGCAGATGCAGCACATA+GGG 0.525967 8_1:+56135755 Msa1202510:CDS
CGACGACGATGTCGAGTTTG+GGG 0.527701 8_1:-56131325 None:intergenic
AAGTCAATTTCTATTCATTG+AGG 0.527747 8_1:+56136849 Msa1202510:CDS
TGCACCTATGGAGCCTGTTG+TGG 0.528938 8_1:-56135688 None:intergenic
CTAACCACAACAGGCTCCAT+AGG 0.532736 8_1:+56135684 Msa1202510:CDS
ATCGCCGGAGTTATCGGCGT+TGG 0.533332 8_1:+56131542 Msa1202510:CDS
AATCTTGAAGAAACAGGAAT+GGG 0.533862 8_1:+56135437 Msa1202510:CDS
TCGCGGGGATGGTAGTTGGA+AGG 0.534807 8_1:+56131768 Msa1202510:CDS
ACCGCCAACGCCGATAACTC+CGG 0.535032 8_1:-56131546 None:intergenic
ATATCTGCTTTAGATGCTCC+AGG 0.535571 8_1:+56133424 Msa1202510:CDS
TATGGAGAATTTGATTAGAG+AGG 0.536927 8_1:+56131952 Msa1202510:CDS
AACTCCGGCGATGCTCTGAT+CGG 0.539560 8_1:-56131531 None:intergenic
AAGAGAACCAAAGGAGTCCA+TGG 0.540163 8_1:+56136756 Msa1202510:CDS
ACAGTTTCAGGAATGGCTGC+TGG 0.540216 8_1:-56133747 None:intergenic
AAAGAATAAAGTGCAAGTGA+TGG 0.540491 8_1:+56137022 Msa1202510:three_prime_UTR
TTAAACAGGTGGAGTCTACT+GGG 0.541159 8_1:+56135357 Msa1202510:CDS
CCCAATTTCTGGTCCAGAAG+AGG 0.542531 8_1:+56136719 Msa1202510:CDS
AAATCTTGAAGAAACAGGAA+TGG 0.542847 8_1:+56135436 Msa1202510:CDS
TATATATGAACACAATAAGC+AGG 0.542965 8_1:+56133010 Msa1202510:CDS
CAACTCAGGGCGCTTCCGGA+TGG 0.544432 8_1:+56134353 Msa1202510:CDS
ACAGCATTAGCATCAGCAAA+TGG 0.545306 8_1:-56134405 None:intergenic
GGAATTCCTATAATTGGAGC+TGG 0.547436 8_1:+56134267 Msa1202510:CDS
GCTATTGAAATGGCTAAAGT+TGG 0.551133 8_1:+56135633 Msa1202510:CDS
AACTGATCCCTTCCGACGAA+TGG 0.552339 8_1:+56135325 Msa1202510:CDS
AATTCCGATCAGAGCATCGC+CGG 0.552505 8_1:+56131527 Msa1202510:CDS
GAGTTAAATGATACAAATGT+TGG 0.555408 8_1:+56136968 Msa1202510:three_prime_UTR
CCATCATACAACCCAACAGT+TGG 0.558568 8_1:-56135401 None:intergenic
GGAGTGAATCGGAGATGAAA+CGG 0.559585 8_1:-56131268 None:intergenic
AATCCCCTTGGTCCTTAGTG+TGG 0.560012 8_1:+56132923 Msa1202510:CDS
TACTTCTTCATGAATTACAA+AGG 0.560642 8_1:+56133479 Msa1202510:CDS
TCAGACTGATGATATTCGAC+AGG 0.561285 8_1:+56133507 Msa1202510:CDS
GAATTCCCAGATGCAAAACC+AGG 0.561552 8_1:+56133837 Msa1202510:CDS
TGTCTAATGCTCCCACACTA+AGG 0.562423 8_1:-56132935 None:intergenic
ATCCCCTTGGTCCTTAGTGT+GGG 0.567379 8_1:+56132924 Msa1202510:CDS
AAATCAGAAGTTCCAACGTA+AGG 0.568648 8_1:-56131665 None:intergenic
CAGAAAACACGAAGAGTGGT+GGG 0.570115 8_1:-56131212 None:intergenic
AATGCCATTGTGTTGTGCCA+TGG 0.571527 8_1:+56135786 Msa1202510:CDS
GAAGTGATCCATTCGTCGGA+AGG 0.575061 8_1:-56135333 None:intergenic
AGGCGTGGTGGCTGTGTCGG+CGG 0.576331 8_1:-56131435 None:intergenic
AAGTGTGATCGGAGAAGCGG+TGG 0.579853 8_1:-56131301 None:intergenic
AGGATATGTGCATACCTCCA+TGG 0.582403 8_1:-56135803 None:intergenic
CTGGGAGAGGTTCATTAGCA+GGG 0.582821 8_1:+56134376 Msa1202510:CDS
CAGAACCTTCATGGACATGT+TGG 0.584516 8_1:-56133770 None:intergenic
TTTATATTGAAGAGAACCAA+AGG 0.585395 8_1:+56136747 Msa1202510:CDS
ATTGTTTCAACCGTAGCTAG+TGG 0.590015 8_1:+56131632 Msa1202510:CDS
TGGCTGTGTCGGCGGTGTCG+TGG 0.591273 8_1:-56131427 None:intergenic
GCAGAAAACACGAAGAGTGG+TGG 0.593483 8_1:-56131213 None:intergenic
ATCTTGTTGAATAGTGGGCG+AGG 0.593533 8_1:-56131162 None:intergenic
ATGTTGGACAGTTTCAGGAA+TGG 0.595655 8_1:-56133754 None:intergenic
AAGTGATCCATTCGTCGGAA+GGG 0.596004 8_1:-56135332 None:intergenic
TAAGGAAGTGATCCATTCGT+CGG 0.596999 8_1:-56135337 None:intergenic
CTTGTGATAGCCTGTTCCAC+GGG 0.597066 8_1:-56136810 None:intergenic
CTATTGCAGATGCAGCACAT+AGG 0.598709 8_1:+56135754 Msa1202510:CDS
ACTTGTGATAGCCTGTTCCA+CGG 0.599003 8_1:-56136811 None:intergenic
TGGAGAATTTGATTAGAGAG+GGG 0.600490 8_1:+56131954 Msa1202510:CDS
ATGCTGCTGCTGCTTTCGCG+GGG 0.602053 8_1:+56131753 Msa1202510:CDS
GGAGTCTACTGGGTTCTCTG+GGG 0.603595 8_1:+56135367 Msa1202510:CDS
AATAGAGAAGAAAATCCCCT+TGG 0.605017 8_1:+56132911 Msa1202510:CDS
ACTGTCCAACATGTCCATGA+AGG 0.605252 8_1:+56133765 Msa1202510:CDS
AGAAAACACGAAGAGTGGTG+GGG 0.608458 8_1:-56131211 None:intergenic
GTAGCAGACTACATAGTTGG+AGG 0.610759 8_1:+56132852 Msa1202510:CDS
TAATGCTGTTGTGCTTGACA+TGG 0.611095 8_1:+56134419 Msa1202510:CDS
ATCGGCGTTGGCGGTAGCGG+AGG 0.611183 8_1:+56131554 Msa1202510:CDS
GACGCAGAAAACACGAAGAG+TGG 0.615260 8_1:-56131216 None:intergenic
TTCGCTCATGCGAACAACAG+TGG 0.616404 8_1:+56133315 Msa1202510:CDS
TGTTAATAGTGTTAGCAGAG+TGG 0.616656 8_1:+56131721 Msa1202510:CDS
GAAAACACGAAGAGTGGTGG+GGG 0.617414 8_1:-56131210 None:intergenic
GGGAAGTGTGATCGGAGAAG+CGG 0.617529 8_1:-56131304 None:intergenic
GGATCACTTCCTTAAACAGG+TGG 0.626658 8_1:+56135346 Msa1202510:CDS
CCGGCAACATCAACAATCGC+CGG 0.626831 8_1:-56131698 None:intergenic
TGCTCCCACACTAAGGACCA+AGG 0.628723 8_1:-56132928 None:intergenic
TTCACTAGGTGTGTAAACAA+TGG 0.631098 8_1:-56133817 None:intergenic
GCTCCCACACTAAGGACCAA+GGG 0.633888 8_1:-56132927 None:intergenic
TCAAGGTCATTGATATGATG+GGG 0.640054 8_1:-56133654 None:intergenic
GTTTCAGGAATGGCTGCTGG+TGG 0.640666 8_1:-56133744 None:intergenic
TGGAAGGATTCGGAGTTTAG+GGG 0.641478 8_1:+56131784 Msa1202510:CDS
AAGCATGGAAAGACTACCCG+TGG 0.641514 8_1:+56136794 Msa1202510:CDS
ACCTCCATGGCACAACACAA+TGG 0.642979 8_1:-56135790 None:intergenic
GTCTTGTGGAAGAGGCGTGG+TGG 0.645418 8_1:-56131447 None:intergenic
ATGAATGTGAAATCTGGTGA+AGG 0.646641 8_1:-56131380 None:intergenic
TCTGTCTTGTGGAAGAGGCG+TGG 0.650333 8_1:-56131450 None:intergenic
GGCCAAACGGAACCTTACGT+TGG 0.650375 8_1:+56131653 Msa1202510:CDS
TCTGCTAACACTATTAACAC+CGG 0.659837 8_1:-56131717 None:intergenic
TCTCTAACAGCATCAACACA+AGG 0.665197 8_1:-56131866 None:intergenic
AAATGACGAAGCAAATGTAA+GGG 0.668032 8_1:+56136991 Msa1202510:three_prime_UTR
GCCATTGTGTTGTGCCATGG+AGG 0.668174 8_1:+56135789 Msa1202510:CDS
GACGACGATGTCGAGTTTGG+GGG 0.669216 8_1:-56131324 None:intergenic
CTCCCACACTAAGGACCAAG+GGG 0.674241 8_1:-56132926 None:intergenic
GCCAAGTTTGAAGAAGCTGG+AGG 0.688470 8_1:+56134309 Msa1202510:CDS
ACGCCTCTTCCACAAGACAG+AGG 0.696926 8_1:+56131452 Msa1202510:CDS
TTGTTGAATAGTGGGCGAGG+AGG 0.699454 8_1:-56131159 None:intergenic
TCTCTATTATGACATCAAAG+CGG 0.700503 8_1:-56132896 None:intergenic
ATGTAGCGTACAAAACACAC+TGG 0.700677 8_1:-56136906 None:intergenic
CGTTCACTTCTCTTCCACTG+GGG 0.700969 8_1:+56131597 Msa1202510:CDS
AGAAGCGGTGGAGATTGGAG+CGG 0.701088 8_1:-56131289 None:intergenic
TTTGGACATCACAACAACAG+AGG 0.705289 8_1:+56132830 Msa1202510:CDS
TAGTGTGGGAGCATTAGACA+TGG 0.711178 8_1:+56132938 Msa1202510:CDS
GTAAACTTATCATCAACTCG+CGG 0.742358 8_1:-56131812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTCAACAAGATTTTAATA+TGG + chr8_1:56131172-56131191 Msa1202510:exon 15.0%
!! AGATTATAAATGTTACAAAA+AGG - chr8_1:56132314-56132333 None:intergenic 15.0%
!! CAATGTATGTATAATATAAA+AGG - chr8_1:56132525-56132544 None:intergenic 15.0%
!! AAAATAAACCAAATAAATGT+TGG - chr8_1:56132614-56132633 None:intergenic 15.0%
!!! TTAACTTTTATTGAATTGTA+TGG + chr8_1:56132676-56132695 Msa1202510:intron 15.0%
!! TTTAAAGATCAAATAGATAA+AGG + chr8_1:56134246-56134265 Msa1202510:CDS 15.0%
!! AAAATGAATCATATTATAAG+TGG - chr8_1:56135521-56135540 None:intergenic 15.0%
!! TAAAATAGAGAAATAATAGA+AGG + chr8_1:56136210-56136229 Msa1202510:intron 15.0%
!! AAAATAGAGAAATAATAGAA+GGG + chr8_1:56136211-56136230 Msa1202510:intron 15.0%
!! TTAAAATCTTGTTGAATAGT+GGG - chr8_1:56131170-56131189 None:intergenic 20.0%
!! ATTAAAATCTTGTTGAATAG+TGG - chr8_1:56131171-56131190 None:intergenic 20.0%
!!! TTTAAAATATTTGAGTTGCA+TGG + chr8_1:56132493-56132512 Msa1202510:intron 20.0%
!!! AAATTTCATTTTTACTCTCA+TGG + chr8_1:56132585-56132604 Msa1202510:intron 20.0%
!! GTATAAAAAAATACAAACAG+AGG - chr8_1:56132788-56132807 None:intergenic 20.0%
!! ATATATCAGTGATCTTATAT+TGG + chr8_1:56133182-56133201 Msa1202510:intron 20.0%
!!! CAGTTTATTTGCTATAAAAT+CGG - chr8_1:56133359-56133378 None:intergenic 20.0%
!!! AAAGTTTCAATTTTCTAACT+TGG + chr8_1:56133575-56133594 Msa1202510:intron 20.0%
!!! GAATATGCATTTTATTTGAA+AGG - chr8_1:56133964-56133983 None:intergenic 20.0%
!! ATTTCATGGAAAAATTAACA+CGG - chr8_1:56134049-56134068 None:intergenic 20.0%
!! TTAACACAAAAAAAAGCTAT+TGG - chr8_1:56134117-56134136 None:intergenic 20.0%
!! AAAAGGAAAAAAAAACATAC+CGG - chr8_1:56134459-56134478 None:intergenic 20.0%
!!! ACAAAAGTATAGAAAGAAAA+AGG - chr8_1:56134476-56134495 None:intergenic 20.0%
!! TCGAGATTATTGTTAAATAT+AGG + chr8_1:56134598-56134617 Msa1202510:intron 20.0%
!! AAGTTCTTAGAAACATTAAA+TGG + chr8_1:56134788-56134807 Msa1202510:intron 20.0%
!!! ATTTCTAACATACTTTTTGT+GGG + chr8_1:56134811-56134830 Msa1202510:intron 20.0%
!! GCATTAATATACAAACAAAA+AGG - chr8_1:56135834-56135853 None:intergenic 20.0%
!! TTAAAAAAAACCATTATCCT+GGG + chr8_1:56135946-56135965 Msa1202510:intron 20.0%
!!! GAATTTTTCCTAATTACTTT+TGG + chr8_1:56136568-56136587 Msa1202510:intron 20.0%
! TGTTGAATGCATATAAAGTT+AGG - chr8_1:56132006-56132025 None:intergenic 25.0%
! AAACAAAGTAGGGAAAAATT+TGG - chr8_1:56132056-56132075 None:intergenic 25.0%
!! TTAGGAAATTTTACGCATAT+TGG + chr8_1:56132169-56132188 Msa1202510:intron 25.0%
! ACAACTTACAATCATCAATT+TGG - chr8_1:56132250-56132269 None:intergenic 25.0%
!!! GTTTTAAATTAAAGCATTCG+AGG + chr8_1:56132415-56132434 Msa1202510:intron 25.0%
! AAAAAAATACAAACAGAGGA+AGG - chr8_1:56132784-56132803 None:intergenic 25.0%
! TATATATGAACACAATAAGC+AGG + chr8_1:56133010-56133029 Msa1202510:CDS 25.0%
!! AAATGCATTTTATAATCCAC+TGG + chr8_1:56133213-56133232 Msa1202510:intron 25.0%
!! AATGCATTTTATAATCCACT+GGG + chr8_1:56133214-56133233 Msa1202510:intron 25.0%
! AGATGTTTGATATGTTGAAA+TGG + chr8_1:56133242-56133261 Msa1202510:intron 25.0%
! TTATAGCAAATAAACTGAAC+AGG + chr8_1:56133362-56133381 Msa1202510:CDS 25.0%
! TACTTCTTCATGAATTACAA+AGG + chr8_1:56133479-56133498 Msa1202510:CDS 25.0%
!! GAAGAATCTTTAACAGTTTT+CGG - chr8_1:56133720-56133739 None:intergenic 25.0%
! TTTCGAATAAATCAAGCTTT+GGG + chr8_1:56133793-56133812 Msa1202510:CDS 25.0%
! AATAAATTCTGTCTTTCTAG+TGG + chr8_1:56133933-56133952 Msa1202510:intron 25.0%
!! TGCATATTCTTTTACAACAA+TGG + chr8_1:56133975-56133994 Msa1202510:intron 25.0%
! AAAAATTAACACGGATAATG+TGG - chr8_1:56134040-56134059 None:intergenic 25.0%
!!! CATTGAGTAAATGTTTTTTC+AGG - chr8_1:56134094-56134113 None:intergenic 25.0%
! TGTTAAACTTCTGTTGAATT+TGG + chr8_1:56134131-56134150 Msa1202510:intron 25.0%
!! AGTACTGTTTTCATTTCTAT+TGG + chr8_1:56134185-56134204 Msa1202510:intron 25.0%
! GATAAAGGAATTCCTATAAT+TGG + chr8_1:56134261-56134280 Msa1202510:CDS 25.0%
!!! TAATAGTTTTGTACAACTCA+GGG + chr8_1:56134340-56134359 Msa1202510:CDS 25.0%
!! TTCTATACTTTTGTTCTTAG+AGG + chr8_1:56134482-56134501 Msa1202510:intron 25.0%
!! TCTATACTTTTGTTCTTAGA+GGG + chr8_1:56134483-56134502 Msa1202510:intron 25.0%
! TGTTAAATATAGGTGATAAG+TGG + chr8_1:56134608-56134627 Msa1202510:intron 25.0%
!!! GATTTCTAACATACTTTTTG+TGG + chr8_1:56134810-56134829 Msa1202510:intron 25.0%
!! ACAACAAATTTTCACTCTAA+TGG + chr8_1:56134861-56134880 Msa1202510:intron 25.0%
!! TAATAGTGTTTGAAGTTCAT+AGG - chr8_1:56134972-56134991 None:intergenic 25.0%
! ATTAATTGACCTGAAAGTTA+TGG + chr8_1:56135006-56135025 Msa1202510:intron 25.0%
!! ATCTAGTAGTTTAAGCTTTT+GGG + chr8_1:56135066-56135085 Msa1202510:intron 25.0%
!! TACAAAATTTTCCAACTGTT+GGG + chr8_1:56135390-56135409 Msa1202510:CDS 25.0%
! TCATATTATAAGTGGTCTAA+CGG - chr8_1:56135513-56135532 None:intergenic 25.0%
! CATATGAGCTACAATAATAT+CGG - chr8_1:56135661-56135680 None:intergenic 25.0%
! GATATTATTGTAGCTCATAT+GGG + chr8_1:56135660-56135679 Msa1202510:CDS 25.0%
! CTTAAAAAAAACCATTATCC+TGG + chr8_1:56135945-56135964 Msa1202510:intron 25.0%
!!! TACTTCTATTGAGCTTTTTT+TGG + chr8_1:56136026-56136045 Msa1202510:intron 25.0%
! TTTCTCACACTTTATAATGA+GGG - chr8_1:56136082-56136101 None:intergenic 25.0%
!!! TAATATCTCCTATCACTTTT+TGG - chr8_1:56136268-56136287 None:intergenic 25.0%
! AAAAAGTGATAGGAGATATT+AGG + chr8_1:56136267-56136286 Msa1202510:intron 25.0%
! TTCCATAAAAATTACCCATT+GGG - chr8_1:56136363-56136382 None:intergenic 25.0%
! ATTCCATAAAAATTACCCAT+TGG - chr8_1:56136364-56136383 None:intergenic 25.0%
!! AGAAAATTTTATCACAACCA+TGG - chr8_1:56136491-56136510 None:intergenic 25.0%
! TTTATATTGAAGAGAACCAA+AGG + chr8_1:56136747-56136766 Msa1202510:CDS 25.0%
! AAGTCAATTTCTATTCATTG+AGG + chr8_1:56136849-56136868 Msa1202510:CDS 25.0%
! GAGTTAAATGATACAAATGT+TGG + chr8_1:56136968-56136987 Msa1202510:three_prime_UTR 25.0%
!! TTCTGATTTAGTGTTGTTTC+CGG + chr8_1:56131679-56131698 Msa1202510:CDS 30.0%
!! GTTGATGATAAGTTTACTGT+TGG + chr8_1:56131818-56131837 Msa1202510:CDS 30.0%
ACTGTTGGTATAACTATGTT+TGG + chr8_1:56131833-56131852 Msa1202510:CDS 30.0%
TATGGAGAATTTGATTAGAG+AGG + chr8_1:56131952-56131971 Msa1202510:CDS 30.0%
ATGGAGAATTTGATTAGAGA+GGG + chr8_1:56131953-56131972 Msa1202510:CDS 30.0%
TTTGTTTGACACACTCAAAT+AGG + chr8_1:56132069-56132088 Msa1202510:intron 30.0%
GAACCAATATGCGTAAAATT+TGG - chr8_1:56132136-56132155 None:intergenic 30.0%
!! TAGGAACTAAATTGATAGTG+AGG + chr8_1:56132209-56132228 Msa1202510:intron 30.0%
!! AGGAACTAAATTGATAGTGA+GGG + chr8_1:56132210-56132229 Msa1202510:intron 30.0%
ACTCTATTAAACTGTCAAGT+TGG - chr8_1:56132285-56132304 None:intergenic 30.0%
AAAGACAAACCAACTTCTTA+TGG - chr8_1:56132464-56132483 None:intergenic 30.0%
ATGAACTGTAATGATCTTTG+TGG + chr8_1:56132710-56132729 Msa1202510:intron 30.0%
TATACATATTCCTGTCTCTT+AGG + chr8_1:56132803-56132822 Msa1202510:intron 30.0%
ATACATATTCCTGTCTCTTA+GGG + chr8_1:56132804-56132823 Msa1202510:intron 30.0%
TCTCTATTATGACATCAAAG+CGG - chr8_1:56132899-56132918 None:intergenic 30.0%
CGAAAGTGAAATAGTAATCA+TGG - chr8_1:56133104-56133123 None:intergenic 30.0%
TTCACTTTCGTTATGCATAT+AGG + chr8_1:56133114-56133133 Msa1202510:intron 30.0%
TCGTTATGCATATAGGATAT+TGG + chr8_1:56133121-56133140 Msa1202510:intron 30.0%
ATCACTGATATATCTTGCTT+TGG - chr8_1:56133175-56133194 None:intergenic 30.0%
! TAAATCAGTTGATTCTTTCC+AGG + chr8_1:56133291-56133310 Msa1202510:intron 30.0%
! TAAACCTTTTTATGATCCAG+AGG + chr8_1:56133447-56133466 Msa1202510:CDS 30.0%
!! CAATTTTCTAACTTGGTTCT+AGG + chr8_1:56133582-56133601 Msa1202510:intron 30.0%
TTCAAGGTCATTGATATGAT+GGG - chr8_1:56133658-56133677 None:intergenic 30.0%
ATTCAAGGTCATTGATATGA+TGG - chr8_1:56133659-56133678 None:intergenic 30.0%
!! ACTAGTTGATGCATTTTTAG+AGG + chr8_1:56133689-56133708 Msa1202510:CDS 30.0%
GTTTCGAATAAATCAAGCTT+TGG + chr8_1:56133792-56133811 Msa1202510:CDS 30.0%
!! ATGCATTTTATTTGAAAGGC+CGG - chr8_1:56133960-56133979 None:intergenic 30.0%
CATGAAATTTAGTTAGTGCT+GGG + chr8_1:56134061-56134080 Msa1202510:intron 30.0%
ATGAAATTTAGTTAGTGCTG+GGG + chr8_1:56134062-56134081 Msa1202510:intron 30.0%
ATTTCTATTGGCAGAAACTT+TGG + chr8_1:56134197-56134216 Msa1202510:intron 30.0%
!!! CTAATAGTTTTGTACAACTC+AGG + chr8_1:56134339-56134358 Msa1202510:CDS 30.0%
CATCACTAACAATATACTAC+CGG + chr8_1:56134758-56134777 Msa1202510:intron 30.0%
! TTCTAAGAACTTACTATTGC+CGG - chr8_1:56134780-56134799 None:intergenic 30.0%
! CAAATTTTCACTCTAATGGT+AGG + chr8_1:56134865-56134884 Msa1202510:intron 30.0%
TGTAAGAATGGTTCTTCTTA+AGG - chr8_1:56134893-56134912 None:intergenic 30.0%
TCCAATTCAGTTACTTATGT+GGG - chr8_1:56134924-56134943 None:intergenic 30.0%
GATTTCTTACCATAACTTTC+AGG - chr8_1:56135018-56135037 None:intergenic 30.0%
CAAAAGCTTAAACTACTAGA+TGG - chr8_1:56135067-56135086 None:intergenic 30.0%
! CATCTAGTAGTTTAAGCTTT+TGG + chr8_1:56135065-56135084 Msa1202510:intron 30.0%
AGTTATCTTGGGTGATAAAT+TGG + chr8_1:56135177-56135196 Msa1202510:intron 30.0%
TGATAGTAAATTCCTTGTCA+AGG + chr8_1:56135207-56135226 Msa1202510:intron 30.0%
! GTACAAAATTTTCCAACTGT+TGG + chr8_1:56135389-56135408 Msa1202510:CDS 30.0%
! GGTTGTATGATGGTAATTTT+AGG + chr8_1:56135411-56135430 Msa1202510:CDS 30.0%
AAATCTTGAAGAAACAGGAA+TGG + chr8_1:56135436-56135455 Msa1202510:CDS 30.0%
AATCTTGAAGAAACAGGAAT+GGG + chr8_1:56135437-56135456 Msa1202510:CDS 30.0%
TTCGTATTAAATTGACAGCT+TGG + chr8_1:56135539-56135558 Msa1202510:intron 30.0%
ATCCAAAAAGCCCATAAAAT+GGG + chr8_1:56135573-56135592 Msa1202510:CDS 30.0%
! TCATGTTGATTGAATGCATA+AGG - chr8_1:56135612-56135631 None:intergenic 30.0%
TCAACATGAAGCTATTGAAA+TGG + chr8_1:56135623-56135642 Msa1202510:CDS 30.0%
CGATATTATTGTAGCTCATA+TGG + chr8_1:56135659-56135678 Msa1202510:CDS 30.0%
ATACAAACAAAAAGGTTTCC+AGG - chr8_1:56135826-56135845 None:intergenic 30.0%
CCTACAATTTAAAAACTGAC+AGG - chr8_1:56135883-56135902 None:intergenic 30.0%
! CCTGTCAGTTTTTAAATTGT+AGG + chr8_1:56135880-56135899 Msa1202510:intron 30.0%
!!! TTTTTAAGACCGTCAGTTAT+TGG - chr8_1:56135933-56135952 None:intergenic 30.0%
!! TCAATAGAAGTATTTCAGCA+TGG - chr8_1:56136018-56136037 None:intergenic 30.0%
TTCTCACACTTTATAATGAG+GGG - chr8_1:56136081-56136100 None:intergenic 30.0%
CTTTCTCACACTTTATAATG+AGG - chr8_1:56136083-56136102 None:intergenic 30.0%
CATTATAAAGTGTGAGAAAG+AGG + chr8_1:56136083-56136102 Msa1202510:intron 30.0%
GAAAAAGAAGGCTCAATTAT+AGG + chr8_1:56136122-56136141 Msa1202510:intron 30.0%
TGAAAAATGCTAAACCCAAT+GGG + chr8_1:56136346-56136365 Msa1202510:intron 30.0%
! AACCCAATGGGTAATTTTTA+TGG + chr8_1:56136358-56136377 Msa1202510:intron 30.0%
! TAATTTTTATGGAATTGCCG+TGG + chr8_1:56136369-56136388 Msa1202510:intron 30.0%
! AGTATTACTTGAGTGTGTTT+TGG + chr8_1:56136409-56136428 Msa1202510:intron 30.0%
! GTATTACTTGAGTGTGTTTT+GGG + chr8_1:56136410-56136429 Msa1202510:intron 30.0%
ATTACAATTACCACTCTCAA+TGG - chr8_1:56136444-56136463 None:intergenic 30.0%
GTGGTAATTGTAATTGTTGA+TGG + chr8_1:56136450-56136469 Msa1202510:intron 30.0%
AGTTATTGTTTGCTCTTACT+TGG + chr8_1:56136522-56136541 Msa1202510:intron 30.0%
TCTAGTTGCCAAAAGTAATT+AGG - chr8_1:56136579-56136598 None:intergenic 30.0%
AATAATGTACTGGAATATGC+AGG + chr8_1:56136696-56136715 Msa1202510:intron 30.0%
AATATAAATTCTGCCTCTTC+TGG - chr8_1:56136735-56136754 None:intergenic 30.0%
AAATGACGAAGCAAATGTAA+GGG + chr8_1:56136991-56137010 Msa1202510:three_prime_UTR 30.0%
AAAGAATAAAGTGCAAGTGA+TGG + chr8_1:56137022-56137041 Msa1202510:three_prime_UTR 30.0%
AAGAATAAAGTGCAAGTGAT+GGG + chr8_1:56137023-56137042 Msa1202510:three_prime_UTR 30.0%
ATGAATGTGAAATCTGGTGA+AGG - chr8_1:56131383-56131402 None:intergenic 35.0%
! GTAAGAAATGTTGAAGTGCT+TGG - chr8_1:56131499-56131518 None:intergenic 35.0%
AAATCAGAAGTTCCAACGTA+AGG - chr8_1:56131668-56131687 None:intergenic 35.0%
TCTGCTAACACTATTAACAC+CGG - chr8_1:56131720-56131739 None:intergenic 35.0%
TGTTAATAGTGTTAGCAGAG+TGG + chr8_1:56131721-56131740 Msa1202510:CDS 35.0%
GTAAACTTATCATCAACTCG+CGG - chr8_1:56131815-56131834 None:intergenic 35.0%
TAGAGATAGGTTGCATAAAG+AGG + chr8_1:56131883-56131902 Msa1202510:CDS 35.0%
AGAGATAGGTTGCATAAAGA+GGG + chr8_1:56131884-56131903 Msa1202510:CDS 35.0%
TAAAGAGGGTTATGAGAGTT+TGG + chr8_1:56131898-56131917 Msa1202510:CDS 35.0%
!!! AGTTTGGTTTTTCATGCTAC+TGG + chr8_1:56131914-56131933 Msa1202510:CDS 35.0%
!!! GTTTGGTTTTTCATGCTACT+GGG + chr8_1:56131915-56131934 Msa1202510:CDS 35.0%
!!! TTTGGTTTTTCATGCTACTG+GGG + chr8_1:56131916-56131935 Msa1202510:CDS 35.0%
TGGAGAATTTGATTAGAGAG+GGG + chr8_1:56131954-56131973 Msa1202510:CDS 35.0%
!!! ACAATGTAGTTTTAGTCACC+TGG + chr8_1:56132023-56132042 Msa1202510:intron 35.0%
! GAAAAATTTGGTGGTTTACC+AGG - chr8_1:56132044-56132063 None:intergenic 35.0%
CAAAGTAGGGAAAAATTTGG+TGG - chr8_1:56132053-56132072 None:intergenic 35.0%
TGAGTGTGTCAAACAAAGTA+GGG - chr8_1:56132066-56132085 None:intergenic 35.0%
TTGAGTGTGTCAAACAAAGT+AGG - chr8_1:56132067-56132086 None:intergenic 35.0%
! CTGCCAAATTTTACGCATAT+TGG + chr8_1:56132130-56132149 Msa1202510:intron 35.0%
!! GGAACTAAATTGATAGTGAG+GGG + chr8_1:56132211-56132230 Msa1202510:intron 35.0%
ATAGTGAGGGGTTAAACATA+GGG + chr8_1:56132223-56132242 Msa1202510:intron 35.0%
GGAAGATTACCATAAGAAGT+TGG + chr8_1:56132452-56132471 Msa1202510:intron 35.0%
CATGGTTGCCAACATTTATT+TGG + chr8_1:56132603-56132622 Msa1202510:intron 35.0%
TTAGATGCGTGTGTTTACAT+TGG + chr8_1:56132632-56132651 Msa1202510:intron 35.0%
!! TGTGTTTACATTGGCTGTTT+TGG + chr8_1:56132641-56132660 Msa1202510:intron 35.0%
CATTACAGTTCATCTTGTTG+TGG - chr8_1:56132703-56132722 None:intergenic 35.0%
GCATAAAGAAGAATCTGAAG+CGG - chr8_1:56132758-56132777 None:intergenic 35.0%
CTCTATTATGACATCAAAGC+GGG - chr8_1:56132898-56132917 None:intergenic 35.0%
AATAGAGAAGAAAATCCCCT+TGG + chr8_1:56132911-56132930 Msa1202510:CDS 35.0%
TTTCTTTGCTGAAAACTCTC+TGG - chr8_1:56132990-56133009 None:intergenic 35.0%
TCAAACATCTTTAATCCCAG+TGG - chr8_1:56133232-56133251 None:intergenic 35.0%
! AAAGCAGATATACCCTTTTC+TGG - chr8_1:56133415-56133434 None:intergenic 35.0%
GGATCATAAAAAGGTTTACC+TGG - chr8_1:56133445-56133464 None:intergenic 35.0%
!! GTTCTAGGAAGAACTTCTTA+AGG + chr8_1:56133597-56133616 Msa1202510:intron 35.0%
! TCTAAAGTTGTGTATTGTGC+AGG + chr8_1:56133620-56133639 Msa1202510:intron 35.0%
TCAAGGTCATTGATATGATG+GGG - chr8_1:56133657-56133676 None:intergenic 35.0%
CTAGTGCATTTGCAAATTCA+AGG - chr8_1:56133674-56133693 None:intergenic 35.0%
TATTCGAAACAGAACCTTCA+TGG - chr8_1:56133782-56133801 None:intergenic 35.0%
TTCACTAGGTGTGTAAACAA+TGG - chr8_1:56133820-56133839 None:intergenic 35.0%
ATCTACATGAAATGAGAACC+TGG - chr8_1:56133858-56133877 None:intergenic 35.0%
!! TGCATTTTATTTGAAAGGCC+GGG - chr8_1:56133959-56133978 None:intergenic 35.0%
CCAGCACTAACTAAATTTCA+TGG - chr8_1:56134063-56134082 None:intergenic 35.0%
CCATGAAATTTAGTTAGTGC+TGG + chr8_1:56134060-56134079 Msa1202510:intron 35.0%
CTTGAACAGAATTTAGCAGT+TGG - chr8_1:56134518-56134537 None:intergenic 35.0%
! GTTCAAGTATTGTTCACTTC+AGG + chr8_1:56134531-56134550 Msa1202510:intron 35.0%
TCCACAATTACAATCGCATT+TGG - chr8_1:56134658-56134677 None:intergenic 35.0%
TTGTAATTGTGGAATCACTC+TGG + chr8_1:56134665-56134684 Msa1202510:intron 35.0%
TGTAATTGTGGAATCACTCT+GGG + chr8_1:56134666-56134685 Msa1202510:intron 35.0%
! GGTGTTGAAGAAAGATGTTA+GGG + chr8_1:56134693-56134712 Msa1202510:intron 35.0%
GTGTTGAAGAAAGATGTTAG+GGG + chr8_1:56134694-56134713 Msa1202510:intron 35.0%
TGTTGAAGAAAGATGTTAGG+GGG + chr8_1:56134695-56134714 Msa1202510:intron 35.0%
! ACTTTTTGTGGGTCATACAA+TGG + chr8_1:56134822-56134841 Msa1202510:intron 35.0%
TGGGTTCTTGTATGTAAGAA+TGG - chr8_1:56134905-56134924 None:intergenic 35.0%
ACCCACATAAGTAACTGAAT+TGG + chr8_1:56134920-56134939 Msa1202510:intron 35.0%
CTCCAATTCAGTTACTTATG+TGG - chr8_1:56134925-56134944 None:intergenic 35.0%
GGTAAGAAATCTGCTGTAAA+AGG + chr8_1:56135027-56135046 Msa1202510:intron 35.0%
! GAGTTGGTTCATGACAATTA+AGG + chr8_1:56135090-56135109 Msa1202510:intron 35.0%
GTGCTAAACTTTAATTCCTG+AGG + chr8_1:56135115-56135134 Msa1202510:intron 35.0%
AAACTTTAATTCCTGAGGTC+AGG + chr8_1:56135120-56135139 Msa1202510:intron 35.0%
CTGTCTAACATACTGATCTT+TGG + chr8_1:56135257-56135276 Msa1202510:intron 35.0%
!!! CATACTGATCTTTGGTTTTC+AGG + chr8_1:56135265-56135284 Msa1202510:intron 35.0%
AATGGATCACTTCCTTAAAC+AGG + chr8_1:56135343-56135362 Msa1202510:CDS 35.0%
AGGCAAAATCTTGAAGAAAC+AGG + chr8_1:56135431-56135450 Msa1202510:CDS 35.0%
TTAAATTGACAGCTTGGAAG+TGG + chr8_1:56135545-56135564 Msa1202510:intron 35.0%
GATCCAAAAAGCCCATAAAA+TGG + chr8_1:56135572-56135591 Msa1202510:CDS 35.0%
! TGTCAAGAGACCCATTTTAT+GGG - chr8_1:56135586-56135605 None:intergenic 35.0%
! TTGTCAAGAGACCCATTTTA+TGG - chr8_1:56135587-56135606 None:intergenic 35.0%
GCTATTGAAATGGCTAAAGT+TGG + chr8_1:56135633-56135652 Msa1202510:CDS 35.0%
AAAAACAGCTCTTTCACTTG+AGG + chr8_1:56135710-56135729 Msa1202510:CDS 35.0%
TGTTTGCATCCAATAACTGA+CGG + chr8_1:56135921-56135940 Msa1202510:intron 35.0%
!! TAGAAGTATTTCAGCATGGA+TGG - chr8_1:56136014-56136033 None:intergenic 35.0%
AAGTGTGAGAAAGAGGAAAA+AGG + chr8_1:56136090-56136109 Msa1202510:intron 35.0%
AGTGTGAGAAAGAGGAAAAA+GGG + chr8_1:56136091-56136110 Msa1202510:intron 35.0%
ATCAGTAAGATGGAATGAGA+AGG + chr8_1:56136235-56136254 Msa1202510:intron 35.0%
GTGAAAAATGCTAAACCCAA+TGG + chr8_1:56136345-56136364 Msa1202510:intron 35.0%
TCTCACTGAAAAATCATCCA+CGG - chr8_1:56136389-56136408 None:intergenic 35.0%
! GGTAAACTATTTTCTTGCCA+TGG + chr8_1:56136471-56136490 Msa1202510:intron 35.0%
GAGCAAACAATAACTTAACG+AGG - chr8_1:56136517-56136536 None:intergenic 35.0%
!! CGCGCTTAATTTAGTTTGTT+GGG + chr8_1:56136545-56136564 Msa1202510:intron 35.0%
!! GCGCTTAATTTAGTTTGTTG+GGG + chr8_1:56136546-56136565 Msa1202510:intron 35.0%
ATTAAGAACAACGAGCAGTA+AGG - chr8_1:56136630-56136649 None:intergenic 35.0%
CCAGTACATTATTCTCAACT+GGG - chr8_1:56136689-56136708 None:intergenic 35.0%
TCCAGTACATTATTCTCAAC+TGG - chr8_1:56136690-56136709 None:intergenic 35.0%
ATAAAAACCATGGACTCCTT+TGG - chr8_1:56136766-56136785 None:intergenic 35.0%
! AAAGGAGTCCATGGTTTTTA+TGG + chr8_1:56136765-56136784 Msa1202510:CDS 35.0%
! AAGGAGTCCATGGTTTTTAT+GGG + chr8_1:56136766-56136785 Msa1202510:CDS 35.0%
GTACGCTACATTGCTAATAA+TGG + chr8_1:56136918-56136937 Msa1202510:three_prime_UTR 35.0%
GAAATGACGAAGCAAATGTA+AGG + chr8_1:56136990-56137009 Msa1202510:three_prime_UTR 35.0%
TTCGTTGAGCTTAGTGTCTA+AGG - chr8_1:56131246-56131265 None:intergenic 40.0%
!!! ATCTGGTGAAGGTTTTGGTT+GGG - chr8_1:56131372-56131391 None:intergenic 40.0%
!! AATCTGGTGAAGGTTTTGGT+TGG - chr8_1:56131373-56131392 None:intergenic 40.0%
! GTGAAATCTGGTGAAGGTTT+TGG - chr8_1:56131377-56131396 None:intergenic 40.0%
CTGGAGATGAATGTGAAATC+TGG - chr8_1:56131389-56131408 None:intergenic 40.0%
GTATGAGAGAACTTCGTTTC+TGG - chr8_1:56131408-56131427 None:intergenic 40.0%
! TTGAAGTGCTTGGCTCATTA+CGG - chr8_1:56131489-56131508 None:intergenic 40.0%
ACGGTTGAAACAATGAGCTT+CGG - chr8_1:56131626-56131645 None:intergenic 40.0%
ATTGTTTCAACCGTAGCTAG+TGG + chr8_1:56131632-56131651 Msa1202510:CDS 40.0%
TTGGAAGGATTCGGAGTTTA+GGG + chr8_1:56131783-56131802 Msa1202510:CDS 40.0%
TCTCTAACAGCATCAACACA+AGG - chr8_1:56131869-56131888 None:intergenic 40.0%
! GTGTTGATGCTGTTAGAGAT+AGG + chr8_1:56131870-56131889 Msa1202510:CDS 40.0%
GATTAGAGAGGGGTTTATAC+AGG + chr8_1:56131964-56131983 Msa1202510:CDS 40.0%
ACACACTCAAATAGGTCTCT+AGG + chr8_1:56132077-56132096 Msa1202510:intron 40.0%
! GGTTCATCTGAGATTGTGTT+AGG + chr8_1:56132151-56132170 Msa1202510:intron 40.0%
! GGTTCATCTGAGAGTATGTT+AGG + chr8_1:56132190-56132209 Msa1202510:intron 40.0%
GATAGTGAGGGGTTAAACAT+AGG + chr8_1:56132222-56132241 Msa1202510:intron 40.0%
! TTCATAGAGCGCTCTCAAAT+AGG - chr8_1:56132341-56132360 None:intergenic 40.0%
!! TATGAAGTCAGGGACTAGTT+TGG + chr8_1:56132355-56132374 Msa1202510:intron 40.0%
AAGCATTCGAGGTTTGTATC+TGG + chr8_1:56132426-56132445 Msa1202510:intron 40.0%
TTCGAGGTTTGTATCTGGTT+TGG + chr8_1:56132431-56132450 Msa1202510:intron 40.0%
TTTGGACATCACAACAACAG+AGG + chr8_1:56132830-56132849 Msa1202510:CDS 40.0%
! CTACATAGTTGGAGGTGTAA+TGG + chr8_1:56132860-56132879 Msa1202510:CDS 40.0%
GCATTAGACATGGTGAACTT+TGG + chr8_1:56132948-56132967 Msa1202510:CDS 40.0%
TTGCTGAAAACTCTCTGGTA+TGG - chr8_1:56132985-56133004 None:intergenic 40.0%
AACACAATAAGCAGGTGACT+AGG + chr8_1:56133018-56133037 Msa1202510:intron 40.0%
GACGACTACTCTATATGACT+AGG + chr8_1:56133042-56133061 Msa1202510:intron 40.0%
! CAGATATACCCTTTTCTGGA+AGG - chr8_1:56133411-56133430 None:intergenic 40.0%
! ATATCTGCTTTAGATGCTCC+AGG + chr8_1:56133424-56133443 Msa1202510:CDS 40.0%
GTTGCCTCTGGATCATAAAA+AGG - chr8_1:56133454-56133473 None:intergenic 40.0%
! TTTTATGATCCAGAGGCAAC+TGG + chr8_1:56133454-56133473 Msa1202510:CDS 40.0%
TCAGACTGATGATATTCGAC+AGG + chr8_1:56133507-56133526 Msa1202510:CDS 40.0%
ATGTTGGACAGTTTCAGGAA+TGG - chr8_1:56133757-56133776 None:intergenic 40.0%
TTTGCATCTGGGAATTCACT+AGG - chr8_1:56133834-56133853 None:intergenic 40.0%
GGAATTCCTATAATTGGAGC+TGG + chr8_1:56134267-56134286 Msa1202510:CDS 40.0%
TTCAAACTTGGCAGATATCC+CGG - chr8_1:56134301-56134320 None:intergenic 40.0%
ACAGCATTAGCATCAGCAAA+TGG - chr8_1:56134408-56134427 None:intergenic 40.0%
TAATGCTGTTGTGCTTGACA+TGG + chr8_1:56134419-56134438 Msa1202510:CDS 40.0%
ACATACCGGCAAAACTTCAT+TGG - chr8_1:56134445-56134464 None:intergenic 40.0%
! CAAGTATTGTTCACTTCAGG+TGG + chr8_1:56134534-56134553 Msa1202510:intron 40.0%
GCCAAATGCGATTGTAATTG+TGG + chr8_1:56134654-56134673 Msa1202510:intron 40.0%
!! GGGTGTTGAAGAAAGATGTT+AGG + chr8_1:56134692-56134711 Msa1202510:intron 40.0%
GTTGAAGAAAGATGTTAGGG+GGG + chr8_1:56134696-56134715 Msa1202510:intron 40.0%
!! GTTTAAGCTTTTGGGAGAGT+TGG + chr8_1:56135074-56135093 Msa1202510:intron 40.0%
TCAGCCATCAGTAGTTATCT+TGG + chr8_1:56135165-56135184 Msa1202510:intron 40.0%
CAGCCATCAGTAGTTATCTT+GGG + chr8_1:56135166-56135185 Msa1202510:intron 40.0%
TCACCCAAGATAACTACTGA+TGG - chr8_1:56135172-56135191 None:intergenic 40.0%
!!! ACTGATCTTTGGTTTTCAGG+TGG + chr8_1:56135268-56135287 Msa1202510:intron 40.0%
!!! TGGTTTTCAGGTGGTAAAGA+AGG + chr8_1:56135277-56135296 Msa1202510:intron 40.0%
TAAGGAAGTGATCCATTCGT+CGG - chr8_1:56135340-56135359 None:intergenic 40.0%
TTAAACAGGTGGAGTCTACT+GGG + chr8_1:56135357-56135376 Msa1202510:CDS 40.0%
AAGAAACAGGAATGGGATAC+AGG + chr8_1:56135444-56135463 Msa1202510:CDS 40.0%
TCTCAATACTGCGCATAAGT+TGG + chr8_1:56135486-56135505 Msa1202510:intron 40.0%
CTCAATACTGCGCATAAGTT+GGG + chr8_1:56135487-56135506 Msa1202510:intron 40.0%
! GACCCATTTTATGGGCTTTT+TGG - chr8_1:56135578-56135597 None:intergenic 40.0%
!!! AAGAGCTGTTTTTGCACCTA+TGG - chr8_1:56135703-56135722 None:intergenic 40.0%
TATTGCAGATGCAGCACATA+GGG + chr8_1:56135755-56135774 Msa1202510:CDS 40.0%
AAACTTAAGGCCCAGGATAA+TGG - chr8_1:56135959-56135978 None:intergenic 40.0%
GTGTGAGAAAGAGGAAAAAG+GGG + chr8_1:56136092-56136111 Msa1202510:intron 40.0%
TGTGAGAAAGAGGAAAAAGG+GGG + chr8_1:56136093-56136112 Msa1202510:intron 40.0%
AGGGGGGTAAAAGAAAAAGA+AGG + chr8_1:56136110-56136129 Msa1202510:intron 40.0%
TAGGACTTGAAGTTGACCTT+AGG + chr8_1:56136141-56136160 Msa1202510:intron 40.0%
TTGACCTTAGGTGAGGAAAT+GGG + chr8_1:56136153-56136172 Msa1202510:intron 40.0%
CGATGTATCATTCAGAACGT+TGG + chr8_1:56136184-56136203 Msa1202510:intron 40.0%
!! ATAGAAGGGCATCAGTAAGA+TGG + chr8_1:56136225-56136244 Msa1202510:intron 40.0%
! GCTTTGAGCCAAAAAGTGAT+AGG + chr8_1:56136257-56136276 Msa1202510:intron 40.0%
GTGATAGGAGATATTAGGCT+AGG + chr8_1:56136272-56136291 Msa1202510:intron 40.0%
CAGAGTGTGAAGATAGTACA+CGG + chr8_1:56136312-56136331 Msa1202510:intron 40.0%
AGAGTGTGAAGATAGTACAC+GGG + chr8_1:56136313-56136332 Msa1202510:intron 40.0%
GATAGTACACGGGAAGATTT+CGG + chr8_1:56136323-56136342 Msa1202510:intron 40.0%
!! GCGCGCTTAATTTAGTTTGT+TGG + chr8_1:56136544-56136563 Msa1202510:intron 40.0%
! GTTCTTAATGTCTAGAGCAG+CGG + chr8_1:56136641-56136660 Msa1202510:intron 40.0%
CCCAGTTGAGAATAATGTAC+TGG + chr8_1:56136686-56136705 Msa1202510:intron 40.0%
! AGGAGTCCATGGTTTTTATG+GGG + chr8_1:56136767-56136786 Msa1202510:CDS 40.0%
TTGAAGCCCCATAAAAACCA+TGG - chr8_1:56136776-56136795 None:intergenic 40.0%
! TTTTTATGGGGCTTCAAGCA+TGG + chr8_1:56136779-56136798 Msa1202510:CDS 40.0%
ATGTAGCGTACAAAACACAC+TGG - chr8_1:56136909-56136928 None:intergenic 40.0%
!! GCAGTGTTGATAACTGAGTT+AGG - chr8_1:56137080-56137099 None:intergenic 40.0%
!! ATCTTGTTGAATAGTGGGCG+AGG - chr8_1:56131165-56131184 None:intergenic 45.0%
AGAAAACACGAAGAGTGGTG+GGG - chr8_1:56131214-56131233 None:intergenic 45.0%
CAGAAAACACGAAGAGTGGT+GGG - chr8_1:56131215-56131234 None:intergenic 45.0%
! ACTCTTCGTGTTTTCTGCGT+CGG + chr8_1:56131218-56131237 Msa1202510:CDS 45.0%
GGAGTGAATCGGAGATGAAA+CGG - chr8_1:56131271-56131290 None:intergenic 45.0%
TGCTTGGCTCATTACGGAAA+CGG - chr8_1:56131483-56131502 None:intergenic 45.0%
ATCGTTCACTTCTCTTCCAC+TGG + chr8_1:56131595-56131614 Msa1202510:CDS 45.0%
TCGTTCACTTCTCTTCCACT+GGG + chr8_1:56131596-56131615 Msa1202510:CDS 45.0%
CGGTTGAAACAATGAGCTTC+GGG - chr8_1:56131625-56131644 None:intergenic 45.0%
TTCCAACGTAAGGTTCCGTT+TGG - chr8_1:56131658-56131677 None:intergenic 45.0%
GGATGGTAGTTGGAAGGATT+CGG + chr8_1:56131774-56131793 Msa1202510:CDS 45.0%
GTTGGAAGGATTCGGAGTTT+AGG + chr8_1:56131782-56131801 Msa1202510:CDS 45.0%
TGGAAGGATTCGGAGTTTAG+GGG + chr8_1:56131784-56131803 Msa1202510:CDS 45.0%
! GTTTTTCATGCTACTGGGGT+TGG + chr8_1:56131920-56131939 Msa1202510:CDS 45.0%
!! TCCTGTCTCTTAGGGTGTTT+TGG + chr8_1:56132812-56132831 Msa1202510:intron 45.0%
TCCAAAACACCCTAAGAGAC+AGG - chr8_1:56132816-56132835 None:intergenic 45.0%
GAGGTAGCAGACTACATAGT+TGG + chr8_1:56132849-56132868 Msa1202510:CDS 45.0%
GTAGCAGACTACATAGTTGG+AGG + chr8_1:56132852-56132871 Msa1202510:CDS 45.0%
TGTCTAATGCTCCCACACTA+AGG - chr8_1:56132938-56132957 None:intergenic 45.0%
!! TAGTGTGGGAGCATTAGACA+TGG + chr8_1:56132938-56132957 Msa1202510:CDS 45.0%
GGTCAAAGTCGTAGGATAGT+GGG - chr8_1:56133154-56133173 None:intergenic 45.0%
TGGTCAAAGTCGTAGGATAG+TGG - chr8_1:56133155-56133174 None:intergenic 45.0%
CTTGCTTTGGTCAAAGTCGT+AGG - chr8_1:56133162-56133181 None:intergenic 45.0%
TCGTGTTTGCCTTCCAGAAA+AGG + chr8_1:56133399-56133418 Msa1202510:CDS 45.0%
CGTGTTTGCCTTCCAGAAAA+GGG + chr8_1:56133400-56133419 Msa1202510:CDS 45.0%
GTTGTGTATTGTGCAGGTGA+AGG + chr8_1:56133626-56133645 Msa1202510:intron 45.0%
TGGACATGTTGGACAGTTTC+AGG - chr8_1:56133762-56133781 None:intergenic 45.0%
ACTGTCCAACATGTCCATGA+AGG + chr8_1:56133765-56133784 Msa1202510:CDS 45.0%
CAGAACCTTCATGGACATGT+TGG - chr8_1:56133773-56133792 None:intergenic 45.0%
GAATTCCCAGATGCAAAACC+AGG + chr8_1:56133837-56133856 Msa1202510:CDS 45.0%
!!! GAGAACCTGGTTTTGCATCT+GGG - chr8_1:56133845-56133864 None:intergenic 45.0%
!!! TGAGAACCTGGTTTTGCATC+TGG - chr8_1:56133846-56133865 None:intergenic 45.0%
! ATTCTGTCTTTCTAGTGGCC+CGG + chr8_1:56133938-56133957 Msa1202510:intron 45.0%
CTATAATTGGAGCTGGTGCT+GGG + chr8_1:56134274-56134293 Msa1202510:CDS 45.0%
TCTGCCAAGTTTGAAGAAGC+TGG + chr8_1:56134306-56134325 Msa1202510:CDS 45.0%
TCCTCCAGCTTCTTCAAACT+TGG - chr8_1:56134313-56134332 None:intergenic 45.0%
! CATGGCCAATGAAGTTTTGC+CGG + chr8_1:56134437-56134456 Msa1202510:CDS 45.0%
!! GCAGAAAGCACTTAGTGTCT+AGG + chr8_1:56134734-56134753 Msa1202510:intron 45.0%
GATTCATTGCTGCCTTGACA+AGG - chr8_1:56135222-56135241 None:intergenic 45.0%
!! AAGAAGGTACCTGTTCTTGC+TGG + chr8_1:56135293-56135312 Msa1202510:CDS 45.0%
AAGTGATCCATTCGTCGGAA+GGG - chr8_1:56135335-56135354 None:intergenic 45.0%
GGATCACTTCCTTAAACAGG+TGG + chr8_1:56135346-56135365 Msa1202510:CDS 45.0%
CAGTAGACTCCACCTGTTTA+AGG - chr8_1:56135358-56135377 None:intergenic 45.0%
CTTAAACAGGTGGAGTCTAC+TGG + chr8_1:56135356-56135375 Msa1202510:CDS 45.0%
CCATCATACAACCCAACAGT+TGG - chr8_1:56135404-56135423 None:intergenic 45.0%
! CCAACTGTTGGGTTGTATGA+TGG + chr8_1:56135401-56135420 Msa1202510:CDS 45.0%
AACAGGAATGGGATACAGGT+AGG + chr8_1:56135448-56135467 Msa1202510:intron 45.0%
TGGGATACAGGTAGGTGTTA+TGG + chr8_1:56135456-56135475 Msa1202510:intron 45.0%
! GGGATACAGGTAGGTGTTAT+GGG + chr8_1:56135457-56135476 Msa1202510:intron 45.0%
CATATGGGTCTAACCACAAC+AGG + chr8_1:56135675-56135694 Msa1202510:CDS 45.0%
CTATTGCAGATGCAGCACAT+AGG + chr8_1:56135754-56135773 Msa1202510:CDS 45.0%
GGCACAACACAATGGCATTA+GGG - chr8_1:56135785-56135804 None:intergenic 45.0%
TGGCACAACACAATGGCATT+AGG - chr8_1:56135786-56135805 None:intergenic 45.0%
AATGCCATTGTGTTGTGCCA+TGG + chr8_1:56135786-56135805 Msa1202510:CDS 45.0%
AGGATATGTGCATACCTCCA+TGG - chr8_1:56135806-56135825 None:intergenic 45.0%
! ATGGAGGTATGCACATATCC+TGG + chr8_1:56135805-56135824 Msa1202510:intron 45.0%
ACGCACACAGCTCAAACTTA+AGG - chr8_1:56135972-56135991 None:intergenic 45.0%
GTGAGAAAGAGGAAAAAGGG+GGG + chr8_1:56136094-56136113 Msa1202510:intron 45.0%
CTTGAAGTTGACCTTAGGTG+AGG + chr8_1:56136146-56136165 Msa1202510:intron 45.0%
GTTGACCTTAGGTGAGGAAA+TGG + chr8_1:56136152-56136171 Msa1202510:intron 45.0%
GGTAAGAGATCCATTGAGAG+TGG + chr8_1:56136431-56136450 Msa1202510:intron 45.0%
GAATATGCAGGCCCAATTTC+TGG + chr8_1:56136708-56136727 Msa1202510:intron 45.0%
CCTCTTCTGGACCAGAAATT+GGG - chr8_1:56136722-56136741 None:intergenic 45.0%
AAGAGAACCAAAGGAGTCCA+TGG + chr8_1:56136756-56136775 Msa1202510:CDS 45.0%
ACTTGTGATAGCCTGTTCCA+CGG - chr8_1:56136814-56136833 None:intergenic 45.0%
!! TTGTTGAATAGTGGGCGAGG+AGG - chr8_1:56131162-56131181 None:intergenic 50.0%
GAAAACACGAAGAGTGGTGG+GGG - chr8_1:56131213-56131232 None:intergenic 50.0%
GCAGAAAACACGAAGAGTGG+TGG - chr8_1:56131216-56131235 None:intergenic 50.0%
GACGCAGAAAACACGAAGAG+TGG - chr8_1:56131219-56131238 None:intergenic 50.0%
GAGATTGGAGCGGAGTGAAT+CGG - chr8_1:56131282-56131301 None:intergenic 50.0%
! GAGTTTGGGGGAAGTGTGAT+CGG - chr8_1:56131315-56131334 None:intergenic 50.0%
ACGACGACGATGTCGAGTTT+GGG - chr8_1:56131329-56131348 None:intergenic 50.0%
!!! AGGTTTTGGTTGGGTTGGAG+CGG - chr8_1:56131363-56131382 None:intergenic 50.0%
!!! GGTGAAGGTTTTGGTTGGGT+TGG - chr8_1:56131368-56131387 None:intergenic 50.0%
TTGCCTCTGTCTTGTGGAAG+AGG - chr8_1:56131458-56131477 None:intergenic 50.0%
!! AATTCCGATCAGAGCATCGC+CGG + chr8_1:56131527-56131546 Msa1202510:CDS 50.0%
CGTTCACTTCTCTTCCACTG+GGG + chr8_1:56131597-56131616 Msa1202510:CDS 50.0%
AACCGTAGCTAGTGGCCAAA+CGG + chr8_1:56131640-56131659 Msa1202510:CDS 50.0%
TTCCGTTTGGCCACTAGCTA+CGG - chr8_1:56131645-56131664 None:intergenic 50.0%
TTTCATGCTACTGGGGTTGG+TGG + chr8_1:56131923-56131942 Msa1202510:CDS 50.0%
!! TGAGAGCGCTCTATGAAGTC+AGG + chr8_1:56132344-56132363 Msa1202510:intron 50.0%
!! GAGAGCGCTCTATGAAGTCA+GGG + chr8_1:56132345-56132364 Msa1202510:intron 50.0%
!! GAAGTCAGGGACTAGTTTGG+TGG + chr8_1:56132358-56132377 Msa1202510:intron 50.0%
AATCCCCTTGGTCCTTAGTG+TGG + chr8_1:56132923-56132942 Msa1202510:CDS 50.0%
ATCCCCTTGGTCCTTAGTGT+GGG + chr8_1:56132924-56132943 Msa1202510:CDS 50.0%
TTGTTCGCATGAGCGAAACC+TGG - chr8_1:56133312-56133331 None:intergenic 50.0%
TTCGCTCATGCGAACAACAG+TGG + chr8_1:56133315-56133334 Msa1202510:CDS 50.0%
! AGAAGTACACCAGTTGCCTC+TGG - chr8_1:56133466-56133485 None:intergenic 50.0%
ACAGTTTCAGGAATGGCTGC+TGG - chr8_1:56133750-56133769 None:intergenic 50.0%
CCAGCACCAGCTCCAATTAT+AGG - chr8_1:56134276-56134295 None:intergenic 50.0%
CCTATAATTGGAGCTGGTGC+TGG + chr8_1:56134273-56134292 Msa1202510:CDS 50.0%
GCCAAGTTTGAAGAAGCTGG+AGG + chr8_1:56134309-56134328 Msa1202510:CDS 50.0%
CTGGGAGAGGTTCATTAGCA+GGG + chr8_1:56134376-56134395 Msa1202510:CDS 50.0%
! TTGTGGAATCACTCTGGGAG+AGG + chr8_1:56134671-56134690 Msa1202510:intron 50.0%
! TGTGGAATCACTCTGGGAGA+GGG + chr8_1:56134672-56134691 Msa1202510:intron 50.0%
AAGATGTTAGGGGGGACAGT+AGG + chr8_1:56134704-56134723 Msa1202510:intron 50.0%
AACTGATCCCTTCCGACGAA+TGG + chr8_1:56135325-56135344 Msa1202510:CDS 50.0%
GAAGTGATCCATTCGTCGGA+AGG - chr8_1:56135336-56135355 None:intergenic 50.0%
TGGAGTCTACTGGGTTCTCT+GGG + chr8_1:56135366-56135385 Msa1202510:CDS 50.0%
CTAACCACAACAGGCTCCAT+AGG + chr8_1:56135684-56135703 Msa1202510:CDS 50.0%
ACCTCCATGGCACAACACAA+TGG - chr8_1:56135793-56135812 None:intergenic 50.0%
ACAGCTCAAACTTAAGGCCC+AGG - chr8_1:56135966-56135985 None:intergenic 50.0%
CGTTCCCATTTCCTCACCTA+AGG - chr8_1:56136160-56136179 None:intergenic 50.0%
!! CCCAATTTCTGGTCCAGAAG+AGG + chr8_1:56136719-56136738 Msa1202510:CDS 50.0%
GCCTCTTCTGGACCAGAAAT+TGG - chr8_1:56136723-56136742 None:intergenic 50.0%
AAGCATGGAAAGACTACCCG+TGG + chr8_1:56136794-56136813 Msa1202510:CDS 50.0%
CTTGTGATAGCCTGTTCCAC+GGG - chr8_1:56136813-56136832 None:intergenic 50.0%
AGAAGCGGTGGAGATTGGAG+CGG - chr8_1:56131292-56131311 None:intergenic 55.0%
ATCGGAGAAGCGGTGGAGAT+TGG - chr8_1:56131297-56131316 None:intergenic 55.0%
AAGTGTGATCGGAGAAGCGG+TGG - chr8_1:56131304-56131323 None:intergenic 55.0%
! GGGAAGTGTGATCGGAGAAG+CGG - chr8_1:56131307-56131326 None:intergenic 55.0%
GACGACGATGTCGAGTTTGG+GGG - chr8_1:56131327-56131346 None:intergenic 55.0%
CGACGACGATGTCGAGTTTG+GGG - chr8_1:56131328-56131347 None:intergenic 55.0%
GACGACGACGATGTCGAGTT+TGG - chr8_1:56131330-56131349 None:intergenic 55.0%
!!! TTTTGGTTGGGTTGGAGCGG+TGG - chr8_1:56131360-56131379 None:intergenic 55.0%
TCTGTCTTGTGGAAGAGGCG+TGG - chr8_1:56131453-56131472 None:intergenic 55.0%
ACGCCTCTTCCACAAGACAG+AGG + chr8_1:56131452-56131471 Msa1202510:CDS 55.0%
ACGGCTTTGCCTCTGTCTTG+TGG - chr8_1:56131464-56131483 None:intergenic 55.0%
GGCGATGCTCTGATCGGAAT+TGG - chr8_1:56131528-56131547 None:intergenic 55.0%
AACTCCGGCGATGCTCTGAT+CGG - chr8_1:56131534-56131553 None:intergenic 55.0%
!! CAGAGCATCGCCGGAGTTAT+CGG + chr8_1:56131536-56131555 Msa1202510:CDS 55.0%
GGCCAAACGGAACCTTACGT+TGG + chr8_1:56131653-56131672 Msa1202510:CDS 55.0%
CCGGCAACATCAACAATCGC+CGG - chr8_1:56131701-56131720 None:intergenic 55.0%
CCGGCGATTGTTGATGTTGC+CGG + chr8_1:56131698-56131717 Msa1202510:CDS 55.0%
!! CAATGCTGCTGCTGCTTTCG+CGG + chr8_1:56131751-56131770 Msa1202510:CDS 55.0%
!! AATGCTGCTGCTGCTTTCGC+GGG + chr8_1:56131752-56131771 Msa1202510:CDS 55.0%
!! ATGCTACTGGGGTTGGTGGT+AGG + chr8_1:56131927-56131946 Msa1202510:CDS 55.0%
!! TGCTACTGGGGTTGGTGGTA+GGG + chr8_1:56131928-56131947 Msa1202510:CDS 55.0%
CTCCCACACTAAGGACCAAG+GGG - chr8_1:56132929-56132948 None:intergenic 55.0%
GCTCCCACACTAAGGACCAA+GGG - chr8_1:56132930-56132949 None:intergenic 55.0%
TGCTCCCACACTAAGGACCA+AGG - chr8_1:56132931-56132950 None:intergenic 55.0%
GTTTCAGGAATGGCTGCTGG+TGG - chr8_1:56133747-56133766 None:intergenic 55.0%
! TGTACAACTCAGGGCGCTTC+CGG + chr8_1:56134349-56134368 Msa1202510:CDS 55.0%
ATGAACCTCTCCCAGCCATC+CGG - chr8_1:56134371-56134390 None:intergenic 55.0%
GCTGGGAGAGGTTCATTAGC+AGG + chr8_1:56134375-56134394 Msa1202510:CDS 55.0%
GCACACACACCAGCAAGAAC+AGG - chr8_1:56135305-56135324 None:intergenic 55.0%
GTGGAGTCTACTGGGTTCTC+TGG + chr8_1:56135365-56135384 Msa1202510:CDS 55.0%
GGAGTCTACTGGGTTCTCTG+GGG + chr8_1:56135367-56135386 Msa1202510:CDS 55.0%
TGCACCTATGGAGCCTGTTG+TGG - chr8_1:56135691-56135710 None:intergenic 55.0%
GCCATTGTGTTGTGCCATGG+AGG + chr8_1:56135789-56135808 Msa1202510:CDS 55.0%
GGAAAGACTACCCGTGGAAC+AGG + chr8_1:56136800-56136819 Msa1202510:CDS 55.0%
! AACACGAAGAGTGGTGGGGG+TGG - chr8_1:56131210-56131229 None:intergenic 60.0%
! AAGAGGCGTGGTGGCTGTGT+CGG - chr8_1:56131441-56131460 None:intergenic 60.0%
! GTCTTGTGGAAGAGGCGTGG+TGG - chr8_1:56131450-56131469 None:intergenic 60.0%
ATCGCCGGAGTTATCGGCGT+TGG + chr8_1:56131542-56131561 Msa1202510:CDS 60.0%
ACCGCCAACGCCGATAACTC+CGG - chr8_1:56131549-56131568 None:intergenic 60.0%
!! GTTATCGGCGTTGGCGGTAG+CGG + chr8_1:56131551-56131570 Msa1202510:CDS 60.0%
ATGAGCTTCGGGATCCCCAG+TGG - chr8_1:56131614-56131633 None:intergenic 60.0%
!! ATGCTGCTGCTGCTTTCGCG+GGG + chr8_1:56131753-56131772 Msa1202510:CDS 60.0%
GCTTTCGCGGGGATGGTAGT+TGG + chr8_1:56131764-56131783 Msa1202510:CDS 60.0%
TCGCGGGGATGGTAGTTGGA+AGG + chr8_1:56131768-56131787 Msa1202510:CDS 60.0%
!! TGGGGTTGGTGGTAGGGCTA+TGG + chr8_1:56131934-56131953 Msa1202510:CDS 60.0%
! ATTGGAGCTGGTGCTGGGAC+CGG + chr8_1:56134279-56134298 Msa1202510:CDS 60.0%
TAGGGGGGACAGTAGGCTGT+TGG + chr8_1:56134711-56134730 Msa1202510:intron 60.0%
AGGGGGGACAGTAGGCTGTT+GGG + chr8_1:56134712-56134731 Msa1202510:intron 60.0%
ATCTAGCTGCGCCTGACCTC+AGG - chr8_1:56135134-56135153 None:intergenic 60.0%
! GCCGGAGTTATCGGCGTTGG+CGG + chr8_1:56131545-56131564 Msa1202510:CDS 65.0%
!! TGCTGCTGCTTTCGCGGGGA+TGG + chr8_1:56131757-56131776 Msa1202510:CDS 65.0%
! TTGGAGCTGGTGCTGGGACC+GGG + chr8_1:56134280-56134299 Msa1202510:CDS 65.0%
! CAACTCAGGGCGCTTCCGGA+TGG + chr8_1:56134353-56134372 Msa1202510:CDS 65.0%
! TGGCTGTGTCGGCGGTGTCG+TGG - chr8_1:56131430-56131449 None:intergenic 70.0%
AGGCGTGGTGGCTGTGTCGG+CGG - chr8_1:56131438-56131457 None:intergenic 70.0%
!! ATCGGCGTTGGCGGTAGCGG+AGG + chr8_1:56131554-56131573 Msa1202510:CDS 70.0%
! TCAGGGCGCTTCCGGATGGC+TGG + chr8_1:56134357-56134376 Msa1202510:CDS 70.0%
! CAGGGCGCTTCCGGATGGCT+GGG + chr8_1:56134358-56134377 Msa1202510:CDS 70.0%
CGCTTCCGGATGGCTGGGAG+AGG + chr8_1:56134363-56134382 Msa1202510:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 56131077 56137127 56131077 ID=Msa1202510;Name=Msa1202510
chr8_1 mRNA 56131077 56137127 56131077 ID=Msa1202510-mRNA-1;Parent=Msa1202510;Name=Msa1202510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=114|1|1|1|1|1|8|258|755
chr8_1 exon 56131077 56131985 56131077 ID=Msa1202510-mRNA-1:exon:18173;Parent=Msa1202510-mRNA-1
chr8_1 exon 56132825 56133031 56132825 ID=Msa1202510-mRNA-1:exon:18174;Parent=Msa1202510-mRNA-1
chr8_1 exon 56133313 56133528 56133313 ID=Msa1202510-mRNA-1:exon:18175;Parent=Msa1202510-mRNA-1
chr8_1 exon 56133642 56133858 56133642 ID=Msa1202510-mRNA-1:exon:18176;Parent=Msa1202510-mRNA-1
chr8_1 exon 56134211 56134458 56134211 ID=Msa1202510-mRNA-1:exon:18177;Parent=Msa1202510-mRNA-1
chr8_1 exon 56135287 56135465 56135287 ID=Msa1202510-mRNA-1:exon:18178;Parent=Msa1202510-mRNA-1
chr8_1 exon 56135557 56135810 56135557 ID=Msa1202510-mRNA-1:exon:18179;Parent=Msa1202510-mRNA-1
chr8_1 exon 56136718 56137127 56136718 ID=Msa1202510-mRNA-1:exon:18180;Parent=Msa1202510-mRNA-1
chr8_1 five_prime_UTR 56131077 56131190 56131077 ID=Msa1202510-mRNA-1:five_prime_utr;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56131191 56131985 56131191 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56132825 56133031 56132825 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56133313 56133528 56133313 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56133642 56133858 56133642 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56134211 56134458 56134211 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56135287 56135465 56135287 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56135557 56135810 56135557 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 CDS 56136718 56136869 56136718 ID=Msa1202510-mRNA-1:cds;Parent=Msa1202510-mRNA-1
chr8_1 three_prime_UTR 56136870 56137127 56136870 ID=Msa1202510-mRNA-1:three_prime_utr;Parent=Msa1202510-mRNA-1
Gene Sequence

>Msa1202510

ATGGCACATCACACAACCACCCCCACCACTCTTCGTGTTTTCTGCGTCGGAACCTTAGACACTAAGCTCAACGAACTCCGTTTCATCTCCGATTCACTCCGCTCCAATCTCCACCGCTTCTCCGATCACACTTCCCCCAAACTCGACATCGTCGTCGTCGATGTTTCCACCGCTCCAACCCAACCAAAACCTTCACCAGATTTCACATTCATCTCCAGAAACGAAGTTCTCTCATACCACGACACCGCCGACACAGCCACCACGCCTCTTCCACAAGACAGAGGCAAAGCCGTTTCCGTAATGAGCCAAGCACTTCAACATTTCTTACAAAAATCCAATTCCGATCAGAGCATCGCCGGAGTTATCGGCGTTGGCGGTAGCGGAGGTACATCACTGTTATCATCATCGTTCACTTCTCTTCCACTGGGGATCCCGAAGCTCATTGTTTCAACCGTAGCTAGTGGCCAAACGGAACCTTACGTTGGAACTTCTGATTTAGTGTTGTTTCCGGCGATTGTTGATGTTGCCGGTGTTAATAGTGTTAGCAGAGTGGTTTTTAACAATGCTGCTGCTGCTTTCGCGGGGATGGTAGTTGGAAGGATTCGGAGTTTAGGGGATTCGCCGCGAGTTGATGATAAGTTTACTGTTGGTATAACTATGTTTGGAGTTACTACTCCTTGTGTTGATGCTGTTAGAGATAGGTTGCATAAAGAGGGTTATGAGAGTTTGGTTTTTCATGCTACTGGGGTTGGTGGTAGGGCTATGGAGAATTTGATTAGAGAGGGGTTTATACAGGGTGTTTTGGACATCACAACAACAGAGGTAGCAGACTACATAGTTGGAGGTGTAATGGCTTGCGACAGTTCCCGCTTTGATGTCATAATAGAGAAGAAAATCCCCTTGGTCCTTAGTGTGGGAGCATTAGACATGGTGAACTTTGGAGCAAAAGATACCATACCAGAGAGTTTTCAGCAAAGAAATATATATGAACACAATAAGCAGGTTTCGCTCATGCGAACAACAGTGGACGAGAACAGAAAATTTGCCGATTTTATAGCAAATAAACTGAACAGGTCATCATCTAAGATTCGTGTTTGCCTTCCAGAAAAGGGTATATCTGCTTTAGATGCTCCAGGTAAACCTTTTTATGATCCAGAGGCAACTGGTGTACTTCTTCATGAATTACAAAGGCTTATTCAGACTGATGATATTCGACAGGTGAAGGTGTATCCCCATCATATCAATGACCTTGAATTTGCAAATGCACTAGTTGATGCATTTTTAGAGGTTAATCCGAAAACTGTTAAAGATTCTTCTCATCCACCAGCAGCCATTCCTGAAACTGTCCAACATGTCCATGAAGGTTCTGTTTCGAATAAATCAAGCTTTGGGACCATTGTTTACACACCTAGTGAATTCCCAGATGCAAAACCAGAAACTTTGGAGAAAACACAGCTAATATTGCAGCAATTTAAAGATCAAATAGATAAAGGAATTCCTATAATTGGAGCTGGTGCTGGGACCGGGATATCTGCCAAGTTTGAAGAAGCTGGAGGAGTTGATCTAATAGTTTTGTACAACTCAGGGCGCTTCCGGATGGCTGGGAGAGGTTCATTAGCAGGGTTGTTGCCATTTGCTGATGCTAATGCTGTTGTGCTTGACATGGCCAATGAAGTTTTGCCGGTGGTAAAGAAGGTACCTGTTCTTGCTGGTGTGTGTGCAACTGATCCCTTCCGACGAATGGATCACTTCCTTAAACAGGTGGAGTCTACTGGGTTCTCTGGGGTACAAAATTTTCCAACTGTTGGGTTGTATGATGGTAATTTTAGGCAAAATCTTGAAGAAACAGGAATGGGATACAGCTTGGAAGTGGAGATGATCCAAAAAGCCCATAAAATGGGTCTCTTGACAACTCCTTATGCATTCAATCAACATGAAGCTATTGAAATGGCTAAAGTTGGTGCCGATATTATTGTAGCTCATATGGGTCTAACCACAACAGGCTCCATAGGTGCAAAAACAGCTCTTTCACTTGAGGAAAGTGTAGTTCTTGTACAAGCTATTGCAGATGCAGCACATAGGGTCAACCCTAATGCCATTGTGTTGTGCCATGGAGGCCCAATTTCTGGTCCAGAAGAGGCAGAATTTATATTGAAGAGAACCAAAGGAGTCCATGGTTTTTATGGGGCTTCAAGCATGGAAAGACTACCCGTGGAACAGGCTATCACAAGTACAGTCAAACAATACAAGTCAATTTCTATTCATTGA

Protein sequence

>Msa1202510

MAHHTTTPTTLRVFCVGTLDTKLNELRFISDSLRSNLHRFSDHTSPKLDIVVVDVSTAPTQPKPSPDFTFISRNEVLSYHDTADTATTPLPQDRGKAVSVMSQALQHFLQKSNSDQSIAGVIGVGGSGGTSLLSSSFTSLPLGIPKLIVSTVASGQTEPYVGTSDLVLFPAIVDVAGVNSVSRVVFNNAAAAFAGMVVGRIRSLGDSPRVDDKFTVGITMFGVTTPCVDAVRDRLHKEGYESLVFHATGVGGRAMENLIREGFIQGVLDITTTEVADYIVGGVMACDSSRFDVIIEKKIPLVLSVGALDMVNFGAKDTIPESFQQRNIYEHNKQVSLMRTTVDENRKFADFIANKLNRSSSKIRVCLPEKGISALDAPGKPFYDPEATGVLLHELQRLIQTDDIRQVKVYPHHINDLEFANALVDAFLEVNPKTVKDSSHPPAAIPETVQHVHEGSVSNKSSFGTIVYTPSEFPDAKPETLEKTQLILQQFKDQIDKGIPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTGFSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQHEAIEMAKVGADIIVAHMGLTTTGSIGAKTALSLEESVVLVQAIADAAHRVNPNAIVLCHGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISIH*