AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1202620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202620 MtrunA17_Chr8g0372721 96.026 755 28 2 1 755 1 753 0.0 1476
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1202620 AT5G66420.2 72.473 752 197 6 10 754 5 753 0.0 1023
Msa1202620 AT5G66420.1 75.799 657 153 4 101 754 1 654 0.0 936
Msa1202620 AT5G66420.3 70.340 617 174 5 10 620 5 618 0.0 816

Find 213 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGTCTCTTAGGGTGTTT+TGG 0.175673 8_1:-56226689 Msa1202620:intron
GCCTCTTCTGGACCAGAAAT+TGG 0.181704 8_1:+56222781 None:intergenic
TGGACATGTTGGACAGTTTC+AGG 0.191901 8_1:+56225742 None:intergenic
CAGTAGACTCCACCTGTTTA+AGG 0.197887 8_1:+56224146 None:intergenic
GATAAAGGAATTCCTATAAT+TGG 0.203295 8_1:-56225240 Msa1202620:CDS
GTATGAGAGAACTTCGTTTC+TGG 0.209114 8_1:+56228096 None:intergenic
GAATATGCAGGCCCAATTTC+TGG 0.220621 8_1:-56222793 Msa1202620:intron
ATTAAAATCTTGTTGAATAG+TGG 0.228395 8_1:+56228333 None:intergenic
TTGGAAGGATTCGGAGTTTA+GGG 0.234485 8_1:-56227718 Msa1202620:CDS
GTGGAGTCTACTGGGTTCTC+TGG 0.235907 8_1:-56224136 Msa1202620:CDS
TTCTGATTTAGTGTTGTTTC+CGG 0.241724 8_1:-56227822 Msa1202620:CDS
GTACGCTACATTGCTAATAA+TGG 0.278889 8_1:-56222583 Msa1202620:three_prime_UTR
GTTGGAAGGATTCGGAGTTT+AGG 0.281805 8_1:-56227719 Msa1202620:CDS
AATATAAATTCTGCCTCTTC+TGG 0.285209 8_1:+56222769 None:intergenic
ATGCTACTGGGGTTGGTGGT+AGG 0.296691 8_1:-56227574 Msa1202620:CDS
TAAAGAGGGTTATGAGAGTT+TGG 0.306047 8_1:-56227603 Msa1202620:CDS
GTTGCCTCTGGATCATAAAA+AGG 0.311577 8_1:+56226050 None:intergenic
CCAGCACCAGCTCCAATTAT+AGG 0.313229 8_1:+56225228 None:intergenic
TCAGGGCGCTTCCGGATGGC+TGG 0.318709 8_1:-56225144 Msa1202620:CDS
CTTAAACAGGTGGAGTCTAC+TGG 0.319723 8_1:-56224145 Msa1202620:CDS
CGATATTATTGTAGCTCATA+TGG 0.329891 8_1:-56223842 Msa1202620:CDS
ATCGTTCACTTCTCTTCCAC+TGG 0.330759 8_1:-56227906 Msa1202620:CDS
TGGCACAACACAATGGCATT+AGG 0.331657 8_1:+56223718 None:intergenic
CCGGCGATTGTTGATGTTGC+CGG 0.336777 8_1:-56227803 Msa1202620:CDS
GTTTCGAATAAATCAAGCTT+TGG 0.339409 8_1:-56225709 Msa1202620:CDS
TGGAGTCTACTGGGTTCTCT+GGG 0.339675 8_1:-56224135 Msa1202620:CDS
AGGCAAAATCTTGAAGAAAC+AGG 0.342704 8_1:-56224070 Msa1202620:CDS
GGCGATGCTCTGATCGGAAT+TGG 0.348691 8_1:+56227976 None:intergenic
TATTCGAAACAGAACCTTCA+TGG 0.349418 8_1:+56225722 None:intergenic
GTGAAATCTGGTGAAGGTTT+TGG 0.353239 8_1:+56228127 None:intergenic
TTCGTTGAGCTTAGTGTCTA+AGG 0.353826 8_1:+56228258 None:intergenic
TTTCGAATAAATCAAGCTTT+GGG 0.363828 8_1:-56225708 Msa1202620:CDS
CAATGCTGCTGCTGCTTTCG+CGG 0.366932 8_1:-56227750 Msa1202620:CDS
TGTACAACTCAGGGCGCTTC+CGG 0.367533 8_1:-56225152 Msa1202620:CDS
CCTATAATTGGAGCTGGTGC+TGG 0.368558 8_1:-56225228 Msa1202620:CDS
GACGACGACGATGTCGAGTT+TGG 0.370363 8_1:+56228174 None:intergenic
CAGTTTATTTGCTATAAAAT+CGG 0.373046 8_1:+56226145 None:intergenic
ACGACGACGATGTCGAGTTT+GGG 0.373119 8_1:+56228175 None:intergenic
ATTTCTATTGGCAGAAACTT+TGG 0.377740 8_1:-56225304 Msa1202620:intron
ACTGTTGGTATAACTATGTT+TGG 0.381548 8_1:-56227668 Msa1202620:CDS
CCTCTTCTGGACCAGAAATT+GGG 0.387845 8_1:+56222782 None:intergenic
TTTAAAGATCAAATAGATAA+AGG 0.388535 8_1:-56225255 Msa1202620:CDS
GCTTTCGCGGGGATGGTAGT+TGG 0.393619 8_1:-56227737 Msa1202620:CDS
CGGTTGAAACAATGAGCTTC+GGG 0.395860 8_1:+56227879 None:intergenic
ATCGGAGAAGCGGTGGAGAT+TGG 0.396280 8_1:+56228207 None:intergenic
CAGAGCATCGCCGGAGTTAT+CGG 0.396375 8_1:-56227965 Msa1202620:CDS
TTGAAGTGCTTGGCTCATTA+CGG 0.400952 8_1:+56228015 None:intergenic
AATGCTGCTGCTGCTTTCGC+GGG 0.402218 8_1:-56227749 Msa1202620:CDS
TGCTGCTGCTTTCGCGGGGA+TGG 0.405453 8_1:-56227744 Msa1202620:CDS
GATTAGAGAGGGGTTTATAC+AGG 0.412056 8_1:-56227537 Msa1202620:intron
TGCTACTGGGGTTGGTGGTA+GGG 0.413980 8_1:-56227573 Msa1202620:CDS
TCCTCCAGCTTCTTCAAACT+TGG 0.422732 8_1:+56225191 None:intergenic
GGCACAACACAATGGCATTA+GGG 0.426072 8_1:+56223719 None:intergenic
TGGGGTTGGTGGTAGGGCTA+TGG 0.428818 8_1:-56227567 Msa1202620:CDS
ATTCAAGGTCATTGATATGA+TGG 0.430606 8_1:+56225845 None:intergenic
TCAACATGAAGCTATTGAAA+TGG 0.430609 8_1:-56223878 Msa1202620:CDS
AAGAAGGTACCTGTTCTTGC+TGG 0.431071 8_1:-56224208 Msa1202620:CDS
AAGAAACAGGAATGGGATAC+AGG 0.432948 8_1:-56224057 Msa1202620:intron
GGAAAGACTACCCGTGGAAC+AGG 0.433432 8_1:-56222701 Msa1202620:CDS
TCGTGTTTGCCTTCCAGAAA+AGG 0.434590 8_1:-56226102 Msa1202620:CDS
TCATGTTGATTGAATGCATA+AGG 0.435197 8_1:+56223892 None:intergenic
GGATGGTAGTTGGAAGGATT+CGG 0.439718 8_1:-56227727 Msa1202620:CDS
ATTGGAGCTGGTGCTGGGAC+CGG 0.439807 8_1:-56225222 Msa1202620:CDS
TTGCCTCTGTCTTGTGGAAG+AGG 0.440747 8_1:+56228046 None:intergenic
CATATGAGCTACAATAATAT+CGG 0.442867 8_1:+56223843 None:intergenic
CTAGTGCATTTGCAAATTCA+AGG 0.443766 8_1:+56225830 None:intergenic
GCATTAGACATGGTGAACTT+TGG 0.447128 8_1:-56226553 Msa1202620:CDS
TTCCAACGTAAGGTTCCGTT+TGG 0.447456 8_1:+56227846 None:intergenic
TTTCTTTGCTGAAAACTCTC+TGG 0.449471 8_1:+56226514 None:intergenic
TTATAGCAAATAAACTGAAC+AGG 0.450455 8_1:-56226139 Msa1202620:CDS
ACGGTTGAAACAATGAGCTT+CGG 0.451533 8_1:+56227878 None:intergenic
CGCTTCCGGATGGCTGGGAG+AGG 0.452905 8_1:-56225138 Msa1202620:CDS
GAGGTAGCAGACTACATAGT+TGG 0.454554 8_1:-56226652 Msa1202620:CDS
TTCCGTTTGGCCACTAGCTA+CGG 0.457357 8_1:+56227859 None:intergenic
GCTGGGAGAGGTTCATTAGC+AGG 0.457648 8_1:-56225126 Msa1202620:CDS
GTTATCGGCGTTGGCGGTAG+CGG 0.458736 8_1:-56227950 Msa1202620:CDS
GCAGTGTTGATAACTGAGTT+AGG 0.461631 8_1:+56222424 None:intergenic
AATGGATCACTTCCTTAAAC+AGG 0.464135 8_1:-56224158 Msa1202620:CDS
AAGAGGCGTGGTGGCTGTGT+CGG 0.464483 8_1:+56228063 None:intergenic
CCAACTGTTGGGTTGTATGA+TGG 0.465653 8_1:-56224100 Msa1202620:CDS
TTCAAACTTGGCAGATATCC+CGG 0.468179 8_1:+56225203 None:intergenic
CATATGGGTCTAACCACAAC+AGG 0.468956 8_1:-56223826 Msa1202620:CDS
ATGGAGAATTTGATTAGAGA+GGG 0.469127 8_1:-56227548 Msa1202620:CDS
ACATACCGGCAAAACTTCAT+TGG 0.469735 8_1:+56225059 None:intergenic
TGCTTGGCTCATTACGGAAA+CGG 0.470622 8_1:+56228021 None:intergenic
CTACATAGTTGGAGGTGTAA+TGG 0.471501 8_1:-56226641 Msa1202620:CDS
CGTGTTTGCCTTCCAGAAAA+GGG 0.477764 8_1:-56226101 Msa1202620:CDS
CTGGAGATGAATGTGAAATC+TGG 0.480275 8_1:+56228115 None:intergenic
GTGTTGATGCTGTTAGAGAT+AGG 0.480492 8_1:-56227631 Msa1202620:CDS
TTTCATGCTACTGGGGTTGG+TGG 0.481155 8_1:-56227578 Msa1202620:CDS
GTAAGAAATGTTGAAGTGCT+TGG 0.484412 8_1:+56228005 None:intergenic
TTGGAGCTGGTGCTGGGACC+GGG 0.488582 8_1:-56225221 Msa1202620:CDS
ACGGCTTTGCCTCTGTCTTG+TGG 0.488610 8_1:+56228040 None:intergenic
TTGCTGAAAACTCTCTGGTA+TGG 0.489290 8_1:+56226519 None:intergenic
GAAATGACGAAGCAAATGTA+AGG 0.490850 8_1:-56222511 Msa1202620:three_prime_UTR
CTATAATTGGAGCTGGTGCT+GGG 0.491055 8_1:-56225227 Msa1202620:CDS
GAGATTGGAGCGGAGTGAAT+CGG 0.491499 8_1:+56228222 None:intergenic
GCCGGAGTTATCGGCGTTGG+CGG 0.491993 8_1:-56227956 Msa1202620:CDS
TTAAATTGACAGCTTGGAAG+TGG 0.492050 8_1:-56223956 Msa1202620:intron
AAGAATAAAGTGCAAGTGAT+GGG 0.494926 8_1:-56222478 Msa1202620:three_prime_UTR
TTTGCATCTGGGAATTCACT+AGG 0.496951 8_1:+56225670 None:intergenic
AGAGATAGGTTGCATAAAGA+GGG 0.499545 8_1:-56227617 Msa1202620:CDS
GCACACACACCAGCAAGAAC+AGG 0.500979 8_1:+56224199 None:intergenic
TTAAAATCTTGTTGAATAGT+GGG 0.501359 8_1:+56228334 None:intergenic
CAGGGCGCTTCCGGATGGCT+GGG 0.503971 8_1:-56225143 Msa1202620:CDS
CTCTATTATGACATCAAAGC+GGG 0.511978 8_1:+56226606 None:intergenic
AGAAGTACACCAGTTGCCTC+TGG 0.512364 8_1:+56226038 None:intergenic
ATGAACCTCTCCCAGCCATC+CGG 0.512584 8_1:+56225133 None:intergenic
TCTGCCAAGTTTGAAGAAGC+TGG 0.514940 8_1:-56225195 Msa1202620:CDS
TAGAGATAGGTTGCATAAAG+AGG 0.515466 8_1:-56227618 Msa1202620:CDS
AACCGTAGCTAGTGGCCAAA+CGG 0.517646 8_1:-56227861 Msa1202620:CDS
GTTGATGATAAGTTTACTGT+TGG 0.517901 8_1:-56227683 Msa1202620:CDS
TTCAAGGTCATTGATATGAT+GGG 0.519290 8_1:+56225846 None:intergenic
TCGTTCACTTCTCTTCCACT+GGG 0.520818 8_1:-56227905 Msa1202620:CDS
GATATTATTGTAGCTCATAT+GGG 0.522146 8_1:-56223841 Msa1202620:CDS
TATTGCAGATGCAGCACATA+GGG 0.525967 8_1:-56223746 Msa1202620:CDS
CGACGACGATGTCGAGTTTG+GGG 0.527701 8_1:+56228176 None:intergenic
AAGTCAATTTCTATTCATTG+AGG 0.527747 8_1:-56222652 Msa1202620:exon
TGCACCTATGGAGCCTGTTG+TGG 0.528938 8_1:+56223813 None:intergenic
CTAACCACAACAGGCTCCAT+AGG 0.532736 8_1:-56223817 Msa1202620:CDS
ATCGCCGGAGTTATCGGCGT+TGG 0.533332 8_1:-56227959 Msa1202620:CDS
AATCTTGAAGAAACAGGAAT+GGG 0.533862 8_1:-56224064 Msa1202620:CDS
TCGCGGGGATGGTAGTTGGA+AGG 0.534807 8_1:-56227733 Msa1202620:CDS
ACCGCCAACGCCGATAACTC+CGG 0.535032 8_1:+56227955 None:intergenic
ATATCTGCTTTAGATGCTCC+AGG 0.535571 8_1:-56226077 Msa1202620:CDS
TATGGAGAATTTGATTAGAG+AGG 0.536927 8_1:-56227549 Msa1202620:CDS
AACTCCGGCGATGCTCTGAT+CGG 0.539560 8_1:+56227970 None:intergenic
AAGAGAACCAAAGGAGTCCA+TGG 0.540163 8_1:-56222745 Msa1202620:CDS
ACAGTTTCAGGAATGGCTGC+TGG 0.540216 8_1:+56225754 None:intergenic
AAAGAATAAAGTGCAAGTGA+TGG 0.540491 8_1:-56222479 Msa1202620:three_prime_UTR
TTAAACAGGTGGAGTCTACT+GGG 0.541159 8_1:-56224144 Msa1202620:CDS
CCCAATTTCTGGTCCAGAAG+AGG 0.542531 8_1:-56222782 Msa1202620:CDS
AAATCTTGAAGAAACAGGAA+TGG 0.542847 8_1:-56224065 Msa1202620:CDS
TATATATGAACACAATAAGC+AGG 0.542965 8_1:-56226491 Msa1202620:intron
CAACTCAGGGCGCTTCCGGA+TGG 0.544432 8_1:-56225148 Msa1202620:CDS
ACAGCATTAGCATCAGCAAA+TGG 0.545306 8_1:+56225096 None:intergenic
GGAATTCCTATAATTGGAGC+TGG 0.547436 8_1:-56225234 Msa1202620:CDS
GCTATTGAAATGGCTAAAGT+TGG 0.551133 8_1:-56223868 Msa1202620:CDS
AACTGATCCCTTCCGACGAA+TGG 0.552339 8_1:-56224176 Msa1202620:CDS
AATTCCGATCAGAGCATCGC+CGG 0.552505 8_1:-56227974 Msa1202620:CDS
GAGTTAAATGATACAAATGT+TGG 0.555408 8_1:-56222533 Msa1202620:three_prime_UTR
CCATCATACAACCCAACAGT+TGG 0.558568 8_1:+56224100 None:intergenic
GGAGTGAATCGGAGATGAAA+CGG 0.559585 8_1:+56228233 None:intergenic
AATCCCCTTGGTCCTTAGTG+TGG 0.560012 8_1:-56226578 Msa1202620:CDS
TACTTCTTCATGAATTACAA+AGG 0.560642 8_1:-56226022 Msa1202620:CDS
TCAGACTGATGATATTCGAC+AGG 0.561285 8_1:-56225994 Msa1202620:intron
GAATTCCCAGATGCAAAACC+AGG 0.561552 8_1:-56225664 Msa1202620:intron
TGTCTAATGCTCCCACACTA+AGG 0.562423 8_1:+56226566 None:intergenic
ATCCCCTTGGTCCTTAGTGT+GGG 0.567379 8_1:-56226577 Msa1202620:CDS
AAATCAGAAGTTCCAACGTA+AGG 0.568648 8_1:+56227836 None:intergenic
CAGAAAACACGAAGAGTGGT+GGG 0.570115 8_1:+56228289 None:intergenic
AATGCCATTGTGTTGTGCCA+TGG 0.571527 8_1:-56223715 Msa1202620:CDS
GAAGTGATCCATTCGTCGGA+AGG 0.575061 8_1:+56224168 None:intergenic
AGGCGTGGTGGCTGTGTCGG+CGG 0.576331 8_1:+56228066 None:intergenic
AAGTGTGATCGGAGAAGCGG+TGG 0.579853 8_1:+56228200 None:intergenic
AGGATATGTGCATACCTCCA+TGG 0.582403 8_1:+56223698 None:intergenic
CTGGGAGAGGTTCATTAGCA+GGG 0.582821 8_1:-56225125 Msa1202620:CDS
CAGAACCTTCATGGACATGT+TGG 0.584516 8_1:+56225731 None:intergenic
TTTATATTGAAGAGAACCAA+AGG 0.585395 8_1:-56222754 Msa1202620:CDS
ATTGTTTCAACCGTAGCTAG+TGG 0.590015 8_1:-56227869 Msa1202620:CDS
TGGCTGTGTCGGCGGTGTCG+TGG 0.591273 8_1:+56228074 None:intergenic
GCAGAAAACACGAAGAGTGG+TGG 0.593483 8_1:+56228288 None:intergenic
ATCTTGTTGAATAGTGGGCG+AGG 0.593533 8_1:+56228339 None:intergenic
ATGTTGGACAGTTTCAGGAA+TGG 0.595655 8_1:+56225747 None:intergenic
AAGTGATCCATTCGTCGGAA+GGG 0.596004 8_1:+56224169 None:intergenic
TAAGGAAGTGATCCATTCGT+CGG 0.596999 8_1:+56224164 None:intergenic
CTTGTGATAGCCTGTTCCAC+GGG 0.597066 8_1:+56222691 None:intergenic
CTATTGCAGATGCAGCACAT+AGG 0.598709 8_1:-56223747 Msa1202620:CDS
ACTTGTGATAGCCTGTTCCA+CGG 0.599003 8_1:+56222690 None:intergenic
TGGAGAATTTGATTAGAGAG+GGG 0.600490 8_1:-56227547 Msa1202620:CDS
ATGCTGCTGCTGCTTTCGCG+GGG 0.602053 8_1:-56227748 Msa1202620:CDS
GGAGTCTACTGGGTTCTCTG+GGG 0.603595 8_1:-56224134 Msa1202620:CDS
AATAGAGAAGAAAATCCCCT+TGG 0.605017 8_1:-56226590 Msa1202620:CDS
ACTGTCCAACATGTCCATGA+AGG 0.605252 8_1:-56225736 Msa1202620:CDS
AGAAAACACGAAGAGTGGTG+GGG 0.608458 8_1:+56228290 None:intergenic
GTAGCAGACTACATAGTTGG+AGG 0.610759 8_1:-56226649 Msa1202620:CDS
TAATGCTGTTGTGCTTGACA+TGG 0.611095 8_1:-56225082 Msa1202620:CDS
ATCGGCGTTGGCGGTAGCGG+AGG 0.611183 8_1:-56227947 Msa1202620:CDS
GACGCAGAAAACACGAAGAG+TGG 0.615260 8_1:+56228285 None:intergenic
TTCGCTCATGCGAACAACAG+TGG 0.616404 8_1:-56226186 Msa1202620:CDS
TGTTAATAGTGTTAGCAGAG+TGG 0.616656 8_1:-56227780 Msa1202620:CDS
GAAAACACGAAGAGTGGTGG+GGG 0.617414 8_1:+56228291 None:intergenic
GGGAAGTGTGATCGGAGAAG+CGG 0.617529 8_1:+56228197 None:intergenic
GGATCACTTCCTTAAACAGG+TGG 0.626658 8_1:-56224155 Msa1202620:CDS
CCGGCAACATCAACAATCGC+CGG 0.626831 8_1:+56227803 None:intergenic
TGCTCCCACACTAAGGACCA+AGG 0.628723 8_1:+56226573 None:intergenic
TTCACTAGGTGTGTAAACAA+TGG 0.631098 8_1:+56225684 None:intergenic
GCTCCCACACTAAGGACCAA+GGG 0.633888 8_1:+56226574 None:intergenic
TCAAGGTCATTGATATGATG+GGG 0.640054 8_1:+56225847 None:intergenic
GTTTCAGGAATGGCTGCTGG+TGG 0.640666 8_1:+56225757 None:intergenic
TGGAAGGATTCGGAGTTTAG+GGG 0.641478 8_1:-56227717 Msa1202620:CDS
AAGCATGGAAAGACTACCCG+TGG 0.641514 8_1:-56222707 Msa1202620:CDS
ACCTCCATGGCACAACACAA+TGG 0.642979 8_1:+56223711 None:intergenic
GTCTTGTGGAAGAGGCGTGG+TGG 0.645418 8_1:+56228054 None:intergenic
ATGAATGTGAAATCTGGTGA+AGG 0.646641 8_1:+56228121 None:intergenic
TCTGTCTTGTGGAAGAGGCG+TGG 0.650333 8_1:+56228051 None:intergenic
GGCCAAACGGAACCTTACGT+TGG 0.650375 8_1:-56227848 Msa1202620:CDS
TCTGCTAACACTATTAACAC+CGG 0.659837 8_1:+56227784 None:intergenic
TCTCTAACAGCATCAACACA+AGG 0.665197 8_1:+56227635 None:intergenic
AAATGACGAAGCAAATGTAA+GGG 0.668032 8_1:-56222510 Msa1202620:three_prime_UTR
GCCATTGTGTTGTGCCATGG+AGG 0.668174 8_1:-56223712 Msa1202620:intron
GACGACGATGTCGAGTTTGG+GGG 0.669216 8_1:+56228177 None:intergenic
CTCCCACACTAAGGACCAAG+GGG 0.674241 8_1:+56226575 None:intergenic
GCCAAGTTTGAAGAAGCTGG+AGG 0.688470 8_1:-56225192 Msa1202620:CDS
ACGCCTCTTCCACAAGACAG+AGG 0.696926 8_1:-56228049 Msa1202620:CDS
TTGTTGAATAGTGGGCGAGG+AGG 0.699454 8_1:+56228342 None:intergenic
TCTCTATTATGACATCAAAG+CGG 0.700503 8_1:+56226605 None:intergenic
ATGTAGCGTACAAAACACAC+TGG 0.700677 8_1:+56222595 None:intergenic
CGTTCACTTCTCTTCCACTG+GGG 0.700969 8_1:-56227904 Msa1202620:CDS
AGAAGCGGTGGAGATTGGAG+CGG 0.701088 8_1:+56228212 None:intergenic
TTTGGACATCACAACAACAG+AGG 0.705289 8_1:-56226671 Msa1202620:CDS
TAGTGTGGGAGCATTAGACA+TGG 0.711178 8_1:-56226563 Msa1202620:CDS
GTAAACTTATCATCAACTCG+CGG 0.742358 8_1:+56227689 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTCAACAAGATTTTAATA+TGG - chr8_1:56222491-56222510 Msa1202620:three_prime_UTR 15.0%
!! AGATTATAAATGTTACAAAA+AGG + chr8_1:56223633-56223652 None:intergenic 15.0%
!! CAATGTATGTATAATATAAA+AGG + chr8_1:56223844-56223863 None:intergenic 15.0%
!! AAAATAAACCAAATAAATGT+TGG + chr8_1:56223933-56223952 None:intergenic 15.0%
!!! TTAACTTTTATTGAATTGTA+TGG - chr8_1:56223995-56224014 Msa1202620:intron 15.0%
!! TTTAAAGATCAAATAGATAA+AGG - chr8_1:56225565-56225584 Msa1202620:intron 15.0%
!! AAAATGAATCATATTATAAG+TGG + chr8_1:56226840-56226859 None:intergenic 15.0%
!! TAAAATAGAGAAATAATAGA+AGG - chr8_1:56227529-56227548 Msa1202620:intron 15.0%
!! AAAATAGAGAAATAATAGAA+GGG - chr8_1:56227530-56227549 Msa1202620:intron 15.0%
!! TTAAAATCTTGTTGAATAGT+GGG + chr8_1:56222489-56222508 None:intergenic 20.0%
!! ATTAAAATCTTGTTGAATAG+TGG + chr8_1:56222490-56222509 None:intergenic 20.0%
!!! TTTAAAATATTTGAGTTGCA+TGG - chr8_1:56223812-56223831 Msa1202620:CDS 20.0%
!!! AAATTTCATTTTTACTCTCA+TGG - chr8_1:56223904-56223923 Msa1202620:CDS 20.0%
!! GTATAAAAAAATACAAACAG+AGG + chr8_1:56224107-56224126 None:intergenic 20.0%
!! ATATATCAGTGATCTTATAT+TGG - chr8_1:56224501-56224520 Msa1202620:intron 20.0%
!!! CAGTTTATTTGCTATAAAAT+CGG + chr8_1:56224678-56224697 None:intergenic 20.0%
!!! AAAGTTTCAATTTTCTAACT+TGG - chr8_1:56224894-56224913 Msa1202620:intron 20.0%
!!! GAATATGCATTTTATTTGAA+AGG + chr8_1:56225283-56225302 None:intergenic 20.0%
!! ATTTCATGGAAAAATTAACA+CGG + chr8_1:56225368-56225387 None:intergenic 20.0%
!! TTAACACAAAAAAAAGCTAT+TGG + chr8_1:56225436-56225455 None:intergenic 20.0%
!! AAAAGGAAAAAAAAACATAC+CGG + chr8_1:56225778-56225797 None:intergenic 20.0%
!!! ACAAAAGTATAGAAAGAAAA+AGG + chr8_1:56225795-56225814 None:intergenic 20.0%
!! TCGAGATTATTGTTAAATAT+AGG - chr8_1:56225917-56225936 Msa1202620:intron 20.0%
!! AAGTTCTTAGAAACATTAAA+TGG - chr8_1:56226107-56226126 Msa1202620:CDS 20.0%
!!! ATTTCTAACATACTTTTTGT+GGG - chr8_1:56226130-56226149 Msa1202620:CDS 20.0%
!! GCATTAATATACAAACAAAA+AGG + chr8_1:56227153-56227172 None:intergenic 20.0%
!! TTAAAAAAAACCATTATCCT+GGG - chr8_1:56227265-56227284 Msa1202620:intron 20.0%
!!! GAATTTTTCCTAATTACTTT+TGG - chr8_1:56227887-56227906 Msa1202620:CDS 20.0%
! TGTTGAATGCATATAAAGTT+AGG + chr8_1:56223325-56223344 None:intergenic 25.0%
! AAACAAAGTAGGGAAAAATT+TGG + chr8_1:56223375-56223394 None:intergenic 25.0%
!! TTAGGAAATTTTACGCATAT+TGG - chr8_1:56223488-56223507 Msa1202620:intron 25.0%
! ACAACTTACAATCATCAATT+TGG + chr8_1:56223569-56223588 None:intergenic 25.0%
!!! GTTTTAAATTAAAGCATTCG+AGG - chr8_1:56223734-56223753 Msa1202620:CDS 25.0%
! AAAAAAATACAAACAGAGGA+AGG + chr8_1:56224103-56224122 None:intergenic 25.0%
! TATATATGAACACAATAAGC+AGG - chr8_1:56224329-56224348 Msa1202620:intron 25.0%
!! AAATGCATTTTATAATCCAC+TGG - chr8_1:56224532-56224551 Msa1202620:intron 25.0%
!! AATGCATTTTATAATCCACT+GGG - chr8_1:56224533-56224552 Msa1202620:intron 25.0%
! AGATGTTTGATATGTTGAAA+TGG - chr8_1:56224561-56224580 Msa1202620:intron 25.0%
! TTATAGCAAATAAACTGAAC+AGG - chr8_1:56224681-56224700 Msa1202620:intron 25.0%
! TACTTCTTCATGAATTACAA+AGG - chr8_1:56224798-56224817 Msa1202620:intron 25.0%
!! GAAGAATCTTTAACAGTTTT+CGG + chr8_1:56225039-56225058 None:intergenic 25.0%
! TTTCGAATAAATCAAGCTTT+GGG - chr8_1:56225112-56225131 Msa1202620:CDS 25.0%
! AATAAATTCTGTCTTTCTAG+TGG - chr8_1:56225252-56225271 Msa1202620:CDS 25.0%
!! TGCATATTCTTTTACAACAA+TGG - chr8_1:56225294-56225313 Msa1202620:intron 25.0%
! AAAAATTAACACGGATAATG+TGG + chr8_1:56225359-56225378 None:intergenic 25.0%
!!! CATTGAGTAAATGTTTTTTC+AGG + chr8_1:56225413-56225432 None:intergenic 25.0%
! TGTTAAACTTCTGTTGAATT+TGG - chr8_1:56225450-56225469 Msa1202620:intron 25.0%
!! AGTACTGTTTTCATTTCTAT+TGG - chr8_1:56225504-56225523 Msa1202620:intron 25.0%
! GATAAAGGAATTCCTATAAT+TGG - chr8_1:56225580-56225599 Msa1202620:intron 25.0%
!!! TAATAGTTTTGTACAACTCA+GGG - chr8_1:56225659-56225678 Msa1202620:intron 25.0%
!! TTCTATACTTTTGTTCTTAG+AGG - chr8_1:56225801-56225820 Msa1202620:CDS 25.0%
!! TCTATACTTTTGTTCTTAGA+GGG - chr8_1:56225802-56225821 Msa1202620:CDS 25.0%
! TGTTAAATATAGGTGATAAG+TGG - chr8_1:56225927-56225946 Msa1202620:intron 25.0%
!!! GATTTCTAACATACTTTTTG+TGG - chr8_1:56226129-56226148 Msa1202620:CDS 25.0%
!! ACAACAAATTTTCACTCTAA+TGG - chr8_1:56226180-56226199 Msa1202620:CDS 25.0%
!! TAATAGTGTTTGAAGTTCAT+AGG + chr8_1:56226291-56226310 None:intergenic 25.0%
! ATTAATTGACCTGAAAGTTA+TGG - chr8_1:56226325-56226344 Msa1202620:intron 25.0%
!! ATCTAGTAGTTTAAGCTTTT+GGG - chr8_1:56226385-56226404 Msa1202620:intron 25.0%
!! TACAAAATTTTCCAACTGTT+GGG - chr8_1:56226709-56226728 Msa1202620:intron 25.0%
! TCATATTATAAGTGGTCTAA+CGG + chr8_1:56226832-56226851 None:intergenic 25.0%
! CATATGAGCTACAATAATAT+CGG + chr8_1:56226980-56226999 None:intergenic 25.0%
! GATATTATTGTAGCTCATAT+GGG - chr8_1:56226979-56226998 Msa1202620:intron 25.0%
! CTTAAAAAAAACCATTATCC+TGG - chr8_1:56227264-56227283 Msa1202620:intron 25.0%
!!! TACTTCTATTGAGCTTTTTT+TGG - chr8_1:56227345-56227364 Msa1202620:intron 25.0%
! TTTCTCACACTTTATAATGA+GGG + chr8_1:56227401-56227420 None:intergenic 25.0%
!!! TAATATCTCCTATCACTTTT+TGG + chr8_1:56227587-56227606 None:intergenic 25.0%
! AAAAAGTGATAGGAGATATT+AGG - chr8_1:56227586-56227605 Msa1202620:CDS 25.0%
! TTCCATAAAAATTACCCATT+GGG + chr8_1:56227682-56227701 None:intergenic 25.0%
! ATTCCATAAAAATTACCCAT+TGG + chr8_1:56227683-56227702 None:intergenic 25.0%
!! AGAAAATTTTATCACAACCA+TGG + chr8_1:56227810-56227829 None:intergenic 25.0%
! TTTATATTGAAGAGAACCAA+AGG - chr8_1:56228066-56228085 Msa1202620:CDS 25.0%
! AAGTCAATTTCTATTCATTG+AGG - chr8_1:56228168-56228187 Msa1202620:CDS 25.0%
! GAGTTAAATGATACAAATGT+TGG - chr8_1:56228287-56228306 Msa1202620:CDS 25.0%
!! TTCTGATTTAGTGTTGTTTC+CGG - chr8_1:56222998-56223017 Msa1202620:intron 30.0%
!! GTTGATGATAAGTTTACTGT+TGG - chr8_1:56223137-56223156 Msa1202620:intron 30.0%
ACTGTTGGTATAACTATGTT+TGG - chr8_1:56223152-56223171 Msa1202620:intron 30.0%
TATGGAGAATTTGATTAGAG+AGG - chr8_1:56223271-56223290 Msa1202620:intron 30.0%
ATGGAGAATTTGATTAGAGA+GGG - chr8_1:56223272-56223291 Msa1202620:intron 30.0%
TTTGTTTGACACACTCAAAT+AGG - chr8_1:56223388-56223407 Msa1202620:intron 30.0%
GAACCAATATGCGTAAAATT+TGG + chr8_1:56223455-56223474 None:intergenic 30.0%
!! TAGGAACTAAATTGATAGTG+AGG - chr8_1:56223528-56223547 Msa1202620:intron 30.0%
!! AGGAACTAAATTGATAGTGA+GGG - chr8_1:56223529-56223548 Msa1202620:intron 30.0%
ACTCTATTAAACTGTCAAGT+TGG + chr8_1:56223604-56223623 None:intergenic 30.0%
AAAGACAAACCAACTTCTTA+TGG + chr8_1:56223783-56223802 None:intergenic 30.0%
ATGAACTGTAATGATCTTTG+TGG - chr8_1:56224029-56224048 Msa1202620:intron 30.0%
TATACATATTCCTGTCTCTT+AGG - chr8_1:56224122-56224141 Msa1202620:CDS 30.0%
ATACATATTCCTGTCTCTTA+GGG - chr8_1:56224123-56224142 Msa1202620:CDS 30.0%
TCTCTATTATGACATCAAAG+CGG + chr8_1:56224218-56224237 None:intergenic 30.0%
CGAAAGTGAAATAGTAATCA+TGG + chr8_1:56224423-56224442 None:intergenic 30.0%
TTCACTTTCGTTATGCATAT+AGG - chr8_1:56224433-56224452 Msa1202620:intron 30.0%
TCGTTATGCATATAGGATAT+TGG - chr8_1:56224440-56224459 Msa1202620:intron 30.0%
ATCACTGATATATCTTGCTT+TGG + chr8_1:56224494-56224513 None:intergenic 30.0%
! TAAATCAGTTGATTCTTTCC+AGG - chr8_1:56224610-56224629 Msa1202620:intron 30.0%
! TAAACCTTTTTATGATCCAG+AGG - chr8_1:56224766-56224785 Msa1202620:intron 30.0%
!! CAATTTTCTAACTTGGTTCT+AGG - chr8_1:56224901-56224920 Msa1202620:intron 30.0%
TTCAAGGTCATTGATATGAT+GGG + chr8_1:56224977-56224996 None:intergenic 30.0%
ATTCAAGGTCATTGATATGA+TGG + chr8_1:56224978-56224997 None:intergenic 30.0%
!! ACTAGTTGATGCATTTTTAG+AGG - chr8_1:56225008-56225027 Msa1202620:intron 30.0%
GTTTCGAATAAATCAAGCTT+TGG - chr8_1:56225111-56225130 Msa1202620:CDS 30.0%
!! ATGCATTTTATTTGAAAGGC+CGG + chr8_1:56225279-56225298 None:intergenic 30.0%
CATGAAATTTAGTTAGTGCT+GGG - chr8_1:56225380-56225399 Msa1202620:intron 30.0%
ATGAAATTTAGTTAGTGCTG+GGG - chr8_1:56225381-56225400 Msa1202620:intron 30.0%
ATTTCTATTGGCAGAAACTT+TGG - chr8_1:56225516-56225535 Msa1202620:intron 30.0%
!!! CTAATAGTTTTGTACAACTC+AGG - chr8_1:56225658-56225677 Msa1202620:intron 30.0%
CATCACTAACAATATACTAC+CGG - chr8_1:56226077-56226096 Msa1202620:CDS 30.0%
! TTCTAAGAACTTACTATTGC+CGG + chr8_1:56226099-56226118 None:intergenic 30.0%
! CAAATTTTCACTCTAATGGT+AGG - chr8_1:56226184-56226203 Msa1202620:CDS 30.0%
TGTAAGAATGGTTCTTCTTA+AGG + chr8_1:56226212-56226231 None:intergenic 30.0%
TCCAATTCAGTTACTTATGT+GGG + chr8_1:56226243-56226262 None:intergenic 30.0%
GATTTCTTACCATAACTTTC+AGG + chr8_1:56226337-56226356 None:intergenic 30.0%
CAAAAGCTTAAACTACTAGA+TGG + chr8_1:56226386-56226405 None:intergenic 30.0%
! CATCTAGTAGTTTAAGCTTT+TGG - chr8_1:56226384-56226403 Msa1202620:intron 30.0%
AGTTATCTTGGGTGATAAAT+TGG - chr8_1:56226496-56226515 Msa1202620:CDS 30.0%
TGATAGTAAATTCCTTGTCA+AGG - chr8_1:56226526-56226545 Msa1202620:CDS 30.0%
! GTACAAAATTTTCCAACTGT+TGG - chr8_1:56226708-56226727 Msa1202620:intron 30.0%
! GGTTGTATGATGGTAATTTT+AGG - chr8_1:56226730-56226749 Msa1202620:intron 30.0%
AAATCTTGAAGAAACAGGAA+TGG - chr8_1:56226755-56226774 Msa1202620:intron 30.0%
AATCTTGAAGAAACAGGAAT+GGG - chr8_1:56226756-56226775 Msa1202620:intron 30.0%
TTCGTATTAAATTGACAGCT+TGG - chr8_1:56226858-56226877 Msa1202620:intron 30.0%
ATCCAAAAAGCCCATAAAAT+GGG - chr8_1:56226892-56226911 Msa1202620:intron 30.0%
! TCATGTTGATTGAATGCATA+AGG + chr8_1:56226931-56226950 None:intergenic 30.0%
TCAACATGAAGCTATTGAAA+TGG - chr8_1:56226942-56226961 Msa1202620:intron 30.0%
CGATATTATTGTAGCTCATA+TGG - chr8_1:56226978-56226997 Msa1202620:intron 30.0%
ATACAAACAAAAAGGTTTCC+AGG + chr8_1:56227145-56227164 None:intergenic 30.0%
CCTACAATTTAAAAACTGAC+AGG + chr8_1:56227202-56227221 None:intergenic 30.0%
! CCTGTCAGTTTTTAAATTGT+AGG - chr8_1:56227199-56227218 Msa1202620:intron 30.0%
!!! TTTTTAAGACCGTCAGTTAT+TGG + chr8_1:56227252-56227271 None:intergenic 30.0%
!! TCAATAGAAGTATTTCAGCA+TGG + chr8_1:56227337-56227356 None:intergenic 30.0%
TTCTCACACTTTATAATGAG+GGG + chr8_1:56227400-56227419 None:intergenic 30.0%
CTTTCTCACACTTTATAATG+AGG + chr8_1:56227402-56227421 None:intergenic 30.0%
CATTATAAAGTGTGAGAAAG+AGG - chr8_1:56227402-56227421 Msa1202620:intron 30.0%
GAAAAAGAAGGCTCAATTAT+AGG - chr8_1:56227441-56227460 Msa1202620:intron 30.0%
TGAAAAATGCTAAACCCAAT+GGG - chr8_1:56227665-56227684 Msa1202620:CDS 30.0%
! AACCCAATGGGTAATTTTTA+TGG - chr8_1:56227677-56227696 Msa1202620:CDS 30.0%
! TAATTTTTATGGAATTGCCG+TGG - chr8_1:56227688-56227707 Msa1202620:CDS 30.0%
! AGTATTACTTGAGTGTGTTT+TGG - chr8_1:56227728-56227747 Msa1202620:CDS 30.0%
! GTATTACTTGAGTGTGTTTT+GGG - chr8_1:56227729-56227748 Msa1202620:CDS 30.0%
ATTACAATTACCACTCTCAA+TGG + chr8_1:56227763-56227782 None:intergenic 30.0%
GTGGTAATTGTAATTGTTGA+TGG - chr8_1:56227769-56227788 Msa1202620:CDS 30.0%
AGTTATTGTTTGCTCTTACT+TGG - chr8_1:56227841-56227860 Msa1202620:CDS 30.0%
TCTAGTTGCCAAAAGTAATT+AGG + chr8_1:56227898-56227917 None:intergenic 30.0%
AATAATGTACTGGAATATGC+AGG - chr8_1:56228015-56228034 Msa1202620:CDS 30.0%
AATATAAATTCTGCCTCTTC+TGG + chr8_1:56228054-56228073 None:intergenic 30.0%
AAATGACGAAGCAAATGTAA+GGG - chr8_1:56228310-56228329 Msa1202620:CDS 30.0%
AAAGAATAAAGTGCAAGTGA+TGG - chr8_1:56228341-56228360 Msa1202620:five_prime_UTR 30.0%
AAGAATAAAGTGCAAGTGAT+GGG - chr8_1:56228342-56228361 Msa1202620:five_prime_UTR 30.0%
ATGAATGTGAAATCTGGTGA+AGG + chr8_1:56222702-56222721 None:intergenic 35.0%
! GTAAGAAATGTTGAAGTGCT+TGG + chr8_1:56222818-56222837 None:intergenic 35.0%
AAATCAGAAGTTCCAACGTA+AGG + chr8_1:56222987-56223006 None:intergenic 35.0%
TCTGCTAACACTATTAACAC+CGG + chr8_1:56223039-56223058 None:intergenic 35.0%
TGTTAATAGTGTTAGCAGAG+TGG - chr8_1:56223040-56223059 Msa1202620:intron 35.0%
GTAAACTTATCATCAACTCG+CGG + chr8_1:56223134-56223153 None:intergenic 35.0%
TAGAGATAGGTTGCATAAAG+AGG - chr8_1:56223202-56223221 Msa1202620:intron 35.0%
AGAGATAGGTTGCATAAAGA+GGG - chr8_1:56223203-56223222 Msa1202620:intron 35.0%
TAAAGAGGGTTATGAGAGTT+TGG - chr8_1:56223217-56223236 Msa1202620:intron 35.0%
!!! AGTTTGGTTTTTCATGCTAC+TGG - chr8_1:56223233-56223252 Msa1202620:intron 35.0%
!!! GTTTGGTTTTTCATGCTACT+GGG - chr8_1:56223234-56223253 Msa1202620:intron 35.0%
!!! TTTGGTTTTTCATGCTACTG+GGG - chr8_1:56223235-56223254 Msa1202620:intron 35.0%
TGGAGAATTTGATTAGAGAG+GGG - chr8_1:56223273-56223292 Msa1202620:intron 35.0%
!!! ACAATGTAGTTTTAGTCACC+TGG - chr8_1:56223342-56223361 Msa1202620:intron 35.0%
! GAAAAATTTGGTGGTTTACC+AGG + chr8_1:56223363-56223382 None:intergenic 35.0%
CAAAGTAGGGAAAAATTTGG+TGG + chr8_1:56223372-56223391 None:intergenic 35.0%
TGAGTGTGTCAAACAAAGTA+GGG + chr8_1:56223385-56223404 None:intergenic 35.0%
TTGAGTGTGTCAAACAAAGT+AGG + chr8_1:56223386-56223405 None:intergenic 35.0%
! CTGCCAAATTTTACGCATAT+TGG - chr8_1:56223449-56223468 Msa1202620:intron 35.0%
!! GGAACTAAATTGATAGTGAG+GGG - chr8_1:56223530-56223549 Msa1202620:intron 35.0%
ATAGTGAGGGGTTAAACATA+GGG - chr8_1:56223542-56223561 Msa1202620:intron 35.0%
GGAAGATTACCATAAGAAGT+TGG - chr8_1:56223771-56223790 Msa1202620:CDS 35.0%
CATGGTTGCCAACATTTATT+TGG - chr8_1:56223922-56223941 Msa1202620:CDS 35.0%
TTAGATGCGTGTGTTTACAT+TGG - chr8_1:56223951-56223970 Msa1202620:intron 35.0%
!! TGTGTTTACATTGGCTGTTT+TGG - chr8_1:56223960-56223979 Msa1202620:intron 35.0%
CATTACAGTTCATCTTGTTG+TGG + chr8_1:56224022-56224041 None:intergenic 35.0%
GCATAAAGAAGAATCTGAAG+CGG + chr8_1:56224077-56224096 None:intergenic 35.0%
CTCTATTATGACATCAAAGC+GGG + chr8_1:56224217-56224236 None:intergenic 35.0%
AATAGAGAAGAAAATCCCCT+TGG - chr8_1:56224230-56224249 Msa1202620:intron 35.0%
TTTCTTTGCTGAAAACTCTC+TGG + chr8_1:56224309-56224328 None:intergenic 35.0%
TCAAACATCTTTAATCCCAG+TGG + chr8_1:56224551-56224570 None:intergenic 35.0%
! AAAGCAGATATACCCTTTTC+TGG + chr8_1:56224734-56224753 None:intergenic 35.0%
GGATCATAAAAAGGTTTACC+TGG + chr8_1:56224764-56224783 None:intergenic 35.0%
!! GTTCTAGGAAGAACTTCTTA+AGG - chr8_1:56224916-56224935 Msa1202620:intron 35.0%
! TCTAAAGTTGTGTATTGTGC+AGG - chr8_1:56224939-56224958 Msa1202620:intron 35.0%
TCAAGGTCATTGATATGATG+GGG + chr8_1:56224976-56224995 None:intergenic 35.0%
CTAGTGCATTTGCAAATTCA+AGG + chr8_1:56224993-56225012 None:intergenic 35.0%
TATTCGAAACAGAACCTTCA+TGG + chr8_1:56225101-56225120 None:intergenic 35.0%
TTCACTAGGTGTGTAAACAA+TGG + chr8_1:56225139-56225158 None:intergenic 35.0%
ATCTACATGAAATGAGAACC+TGG + chr8_1:56225177-56225196 None:intergenic 35.0%
!! TGCATTTTATTTGAAAGGCC+GGG + chr8_1:56225278-56225297 None:intergenic 35.0%
CCAGCACTAACTAAATTTCA+TGG + chr8_1:56225382-56225401 None:intergenic 35.0%
CCATGAAATTTAGTTAGTGC+TGG - chr8_1:56225379-56225398 Msa1202620:intron 35.0%
CTTGAACAGAATTTAGCAGT+TGG + chr8_1:56225837-56225856 None:intergenic 35.0%
! GTTCAAGTATTGTTCACTTC+AGG - chr8_1:56225850-56225869 Msa1202620:CDS 35.0%
TCCACAATTACAATCGCATT+TGG + chr8_1:56225977-56225996 None:intergenic 35.0%
TTGTAATTGTGGAATCACTC+TGG - chr8_1:56225984-56226003 Msa1202620:intron 35.0%
TGTAATTGTGGAATCACTCT+GGG - chr8_1:56225985-56226004 Msa1202620:intron 35.0%
! GGTGTTGAAGAAAGATGTTA+GGG - chr8_1:56226012-56226031 Msa1202620:CDS 35.0%
GTGTTGAAGAAAGATGTTAG+GGG - chr8_1:56226013-56226032 Msa1202620:CDS 35.0%
TGTTGAAGAAAGATGTTAGG+GGG - chr8_1:56226014-56226033 Msa1202620:CDS 35.0%
! ACTTTTTGTGGGTCATACAA+TGG - chr8_1:56226141-56226160 Msa1202620:CDS 35.0%
TGGGTTCTTGTATGTAAGAA+TGG + chr8_1:56226224-56226243 None:intergenic 35.0%
ACCCACATAAGTAACTGAAT+TGG - chr8_1:56226239-56226258 Msa1202620:intron 35.0%
CTCCAATTCAGTTACTTATG+TGG + chr8_1:56226244-56226263 None:intergenic 35.0%
GGTAAGAAATCTGCTGTAAA+AGG - chr8_1:56226346-56226365 Msa1202620:intron 35.0%
! GAGTTGGTTCATGACAATTA+AGG - chr8_1:56226409-56226428 Msa1202620:intron 35.0%
GTGCTAAACTTTAATTCCTG+AGG - chr8_1:56226434-56226453 Msa1202620:intron 35.0%
AAACTTTAATTCCTGAGGTC+AGG - chr8_1:56226439-56226458 Msa1202620:intron 35.0%
CTGTCTAACATACTGATCTT+TGG - chr8_1:56226576-56226595 Msa1202620:CDS 35.0%
!!! CATACTGATCTTTGGTTTTC+AGG - chr8_1:56226584-56226603 Msa1202620:CDS 35.0%
AATGGATCACTTCCTTAAAC+AGG - chr8_1:56226662-56226681 Msa1202620:CDS 35.0%
AGGCAAAATCTTGAAGAAAC+AGG - chr8_1:56226750-56226769 Msa1202620:intron 35.0%
TTAAATTGACAGCTTGGAAG+TGG - chr8_1:56226864-56226883 Msa1202620:intron 35.0%
GATCCAAAAAGCCCATAAAA+TGG - chr8_1:56226891-56226910 Msa1202620:intron 35.0%
! TGTCAAGAGACCCATTTTAT+GGG + chr8_1:56226905-56226924 None:intergenic 35.0%
! TTGTCAAGAGACCCATTTTA+TGG + chr8_1:56226906-56226925 None:intergenic 35.0%
GCTATTGAAATGGCTAAAGT+TGG - chr8_1:56226952-56226971 Msa1202620:intron 35.0%
AAAAACAGCTCTTTCACTTG+AGG - chr8_1:56227029-56227048 Msa1202620:intron 35.0%
TGTTTGCATCCAATAACTGA+CGG - chr8_1:56227240-56227259 Msa1202620:intron 35.0%
!! TAGAAGTATTTCAGCATGGA+TGG + chr8_1:56227333-56227352 None:intergenic 35.0%
AAGTGTGAGAAAGAGGAAAA+AGG - chr8_1:56227409-56227428 Msa1202620:intron 35.0%
AGTGTGAGAAAGAGGAAAAA+GGG - chr8_1:56227410-56227429 Msa1202620:intron 35.0%
ATCAGTAAGATGGAATGAGA+AGG - chr8_1:56227554-56227573 Msa1202620:CDS 35.0%
GTGAAAAATGCTAAACCCAA+TGG - chr8_1:56227664-56227683 Msa1202620:CDS 35.0%
TCTCACTGAAAAATCATCCA+CGG + chr8_1:56227708-56227727 None:intergenic 35.0%
! GGTAAACTATTTTCTTGCCA+TGG - chr8_1:56227790-56227809 Msa1202620:CDS 35.0%
GAGCAAACAATAACTTAACG+AGG + chr8_1:56227836-56227855 None:intergenic 35.0%
!! CGCGCTTAATTTAGTTTGTT+GGG - chr8_1:56227864-56227883 Msa1202620:CDS 35.0%
!! GCGCTTAATTTAGTTTGTTG+GGG - chr8_1:56227865-56227884 Msa1202620:CDS 35.0%
ATTAAGAACAACGAGCAGTA+AGG + chr8_1:56227949-56227968 None:intergenic 35.0%
CCAGTACATTATTCTCAACT+GGG + chr8_1:56228008-56228027 None:intergenic 35.0%
TCCAGTACATTATTCTCAAC+TGG + chr8_1:56228009-56228028 None:intergenic 35.0%
ATAAAAACCATGGACTCCTT+TGG + chr8_1:56228085-56228104 None:intergenic 35.0%
! AAAGGAGTCCATGGTTTTTA+TGG - chr8_1:56228084-56228103 Msa1202620:CDS 35.0%
! AAGGAGTCCATGGTTTTTAT+GGG - chr8_1:56228085-56228104 Msa1202620:CDS 35.0%
GTACGCTACATTGCTAATAA+TGG - chr8_1:56228237-56228256 Msa1202620:CDS 35.0%
GAAATGACGAAGCAAATGTA+AGG - chr8_1:56228309-56228328 Msa1202620:CDS 35.0%
TTCGTTGAGCTTAGTGTCTA+AGG + chr8_1:56222565-56222584 None:intergenic 40.0%
!!! ATCTGGTGAAGGTTTTGGTT+GGG + chr8_1:56222691-56222710 None:intergenic 40.0%
!! AATCTGGTGAAGGTTTTGGT+TGG + chr8_1:56222692-56222711 None:intergenic 40.0%
! GTGAAATCTGGTGAAGGTTT+TGG + chr8_1:56222696-56222715 None:intergenic 40.0%
CTGGAGATGAATGTGAAATC+TGG + chr8_1:56222708-56222727 None:intergenic 40.0%
GTATGAGAGAACTTCGTTTC+TGG + chr8_1:56222727-56222746 None:intergenic 40.0%
! TTGAAGTGCTTGGCTCATTA+CGG + chr8_1:56222808-56222827 None:intergenic 40.0%
ACGGTTGAAACAATGAGCTT+CGG + chr8_1:56222945-56222964 None:intergenic 40.0%
ATTGTTTCAACCGTAGCTAG+TGG - chr8_1:56222951-56222970 Msa1202620:intron 40.0%
TTGGAAGGATTCGGAGTTTA+GGG - chr8_1:56223102-56223121 Msa1202620:intron 40.0%
TCTCTAACAGCATCAACACA+AGG + chr8_1:56223188-56223207 None:intergenic 40.0%
! GTGTTGATGCTGTTAGAGAT+AGG - chr8_1:56223189-56223208 Msa1202620:intron 40.0%
GATTAGAGAGGGGTTTATAC+AGG - chr8_1:56223283-56223302 Msa1202620:intron 40.0%
ACACACTCAAATAGGTCTCT+AGG - chr8_1:56223396-56223415 Msa1202620:intron 40.0%
! GGTTCATCTGAGATTGTGTT+AGG - chr8_1:56223470-56223489 Msa1202620:intron 40.0%
! GGTTCATCTGAGAGTATGTT+AGG - chr8_1:56223509-56223528 Msa1202620:intron 40.0%
GATAGTGAGGGGTTAAACAT+AGG - chr8_1:56223541-56223560 Msa1202620:intron 40.0%
! TTCATAGAGCGCTCTCAAAT+AGG + chr8_1:56223660-56223679 None:intergenic 40.0%
!! TATGAAGTCAGGGACTAGTT+TGG - chr8_1:56223674-56223693 Msa1202620:intron 40.0%
AAGCATTCGAGGTTTGTATC+TGG - chr8_1:56223745-56223764 Msa1202620:CDS 40.0%
TTCGAGGTTTGTATCTGGTT+TGG - chr8_1:56223750-56223769 Msa1202620:CDS 40.0%
TTTGGACATCACAACAACAG+AGG - chr8_1:56224149-56224168 Msa1202620:CDS 40.0%
! CTACATAGTTGGAGGTGTAA+TGG - chr8_1:56224179-56224198 Msa1202620:CDS 40.0%
GCATTAGACATGGTGAACTT+TGG - chr8_1:56224267-56224286 Msa1202620:intron 40.0%
TTGCTGAAAACTCTCTGGTA+TGG + chr8_1:56224304-56224323 None:intergenic 40.0%
AACACAATAAGCAGGTGACT+AGG - chr8_1:56224337-56224356 Msa1202620:intron 40.0%
GACGACTACTCTATATGACT+AGG - chr8_1:56224361-56224380 Msa1202620:intron 40.0%
! CAGATATACCCTTTTCTGGA+AGG + chr8_1:56224730-56224749 None:intergenic 40.0%
! ATATCTGCTTTAGATGCTCC+AGG - chr8_1:56224743-56224762 Msa1202620:intron 40.0%
GTTGCCTCTGGATCATAAAA+AGG + chr8_1:56224773-56224792 None:intergenic 40.0%
! TTTTATGATCCAGAGGCAAC+TGG - chr8_1:56224773-56224792 Msa1202620:intron 40.0%
TCAGACTGATGATATTCGAC+AGG - chr8_1:56224826-56224845 Msa1202620:intron 40.0%
ATGTTGGACAGTTTCAGGAA+TGG + chr8_1:56225076-56225095 None:intergenic 40.0%
TTTGCATCTGGGAATTCACT+AGG + chr8_1:56225153-56225172 None:intergenic 40.0%
GGAATTCCTATAATTGGAGC+TGG - chr8_1:56225586-56225605 Msa1202620:intron 40.0%
TTCAAACTTGGCAGATATCC+CGG + chr8_1:56225620-56225639 None:intergenic 40.0%
ACAGCATTAGCATCAGCAAA+TGG + chr8_1:56225727-56225746 None:intergenic 40.0%
TAATGCTGTTGTGCTTGACA+TGG - chr8_1:56225738-56225757 Msa1202620:CDS 40.0%
ACATACCGGCAAAACTTCAT+TGG + chr8_1:56225764-56225783 None:intergenic 40.0%
! CAAGTATTGTTCACTTCAGG+TGG - chr8_1:56225853-56225872 Msa1202620:CDS 40.0%
GCCAAATGCGATTGTAATTG+TGG - chr8_1:56225973-56225992 Msa1202620:intron 40.0%
!! GGGTGTTGAAGAAAGATGTT+AGG - chr8_1:56226011-56226030 Msa1202620:CDS 40.0%
GTTGAAGAAAGATGTTAGGG+GGG - chr8_1:56226015-56226034 Msa1202620:CDS 40.0%
!! GTTTAAGCTTTTGGGAGAGT+TGG - chr8_1:56226393-56226412 Msa1202620:intron 40.0%
TCAGCCATCAGTAGTTATCT+TGG - chr8_1:56226484-56226503 Msa1202620:intron 40.0%
CAGCCATCAGTAGTTATCTT+GGG - chr8_1:56226485-56226504 Msa1202620:intron 40.0%
TCACCCAAGATAACTACTGA+TGG + chr8_1:56226491-56226510 None:intergenic 40.0%
!!! ACTGATCTTTGGTTTTCAGG+TGG - chr8_1:56226587-56226606 Msa1202620:CDS 40.0%
!!! TGGTTTTCAGGTGGTAAAGA+AGG - chr8_1:56226596-56226615 Msa1202620:CDS 40.0%
TAAGGAAGTGATCCATTCGT+CGG + chr8_1:56226659-56226678 None:intergenic 40.0%
TTAAACAGGTGGAGTCTACT+GGG - chr8_1:56226676-56226695 Msa1202620:CDS 40.0%
AAGAAACAGGAATGGGATAC+AGG - chr8_1:56226763-56226782 Msa1202620:intron 40.0%
TCTCAATACTGCGCATAAGT+TGG - chr8_1:56226805-56226824 Msa1202620:intron 40.0%
CTCAATACTGCGCATAAGTT+GGG - chr8_1:56226806-56226825 Msa1202620:intron 40.0%
! GACCCATTTTATGGGCTTTT+TGG + chr8_1:56226897-56226916 None:intergenic 40.0%
!!! AAGAGCTGTTTTTGCACCTA+TGG + chr8_1:56227022-56227041 None:intergenic 40.0%
TATTGCAGATGCAGCACATA+GGG - chr8_1:56227074-56227093 Msa1202620:intron 40.0%
AAACTTAAGGCCCAGGATAA+TGG + chr8_1:56227278-56227297 None:intergenic 40.0%
GTGTGAGAAAGAGGAAAAAG+GGG - chr8_1:56227411-56227430 Msa1202620:intron 40.0%
TGTGAGAAAGAGGAAAAAGG+GGG - chr8_1:56227412-56227431 Msa1202620:intron 40.0%
AGGGGGGTAAAAGAAAAAGA+AGG - chr8_1:56227429-56227448 Msa1202620:intron 40.0%
TAGGACTTGAAGTTGACCTT+AGG - chr8_1:56227460-56227479 Msa1202620:intron 40.0%
TTGACCTTAGGTGAGGAAAT+GGG - chr8_1:56227472-56227491 Msa1202620:intron 40.0%
CGATGTATCATTCAGAACGT+TGG - chr8_1:56227503-56227522 Msa1202620:intron 40.0%
!! ATAGAAGGGCATCAGTAAGA+TGG - chr8_1:56227544-56227563 Msa1202620:CDS 40.0%
! GCTTTGAGCCAAAAAGTGAT+AGG - chr8_1:56227576-56227595 Msa1202620:CDS 40.0%
GTGATAGGAGATATTAGGCT+AGG - chr8_1:56227591-56227610 Msa1202620:CDS 40.0%
CAGAGTGTGAAGATAGTACA+CGG - chr8_1:56227631-56227650 Msa1202620:CDS 40.0%
AGAGTGTGAAGATAGTACAC+GGG - chr8_1:56227632-56227651 Msa1202620:CDS 40.0%
GATAGTACACGGGAAGATTT+CGG - chr8_1:56227642-56227661 Msa1202620:CDS 40.0%
!! GCGCGCTTAATTTAGTTTGT+TGG - chr8_1:56227863-56227882 Msa1202620:CDS 40.0%
! GTTCTTAATGTCTAGAGCAG+CGG - chr8_1:56227960-56227979 Msa1202620:CDS 40.0%
CCCAGTTGAGAATAATGTAC+TGG - chr8_1:56228005-56228024 Msa1202620:CDS 40.0%
! AGGAGTCCATGGTTTTTATG+GGG - chr8_1:56228086-56228105 Msa1202620:CDS 40.0%
TTGAAGCCCCATAAAAACCA+TGG + chr8_1:56228095-56228114 None:intergenic 40.0%
! TTTTTATGGGGCTTCAAGCA+TGG - chr8_1:56228098-56228117 Msa1202620:CDS 40.0%
ATGTAGCGTACAAAACACAC+TGG + chr8_1:56228228-56228247 None:intergenic 40.0%
!! GCAGTGTTGATAACTGAGTT+AGG + chr8_1:56228399-56228418 None:intergenic 40.0%
!! ATCTTGTTGAATAGTGGGCG+AGG + chr8_1:56222484-56222503 None:intergenic 45.0%
AGAAAACACGAAGAGTGGTG+GGG + chr8_1:56222533-56222552 None:intergenic 45.0%
CAGAAAACACGAAGAGTGGT+GGG + chr8_1:56222534-56222553 None:intergenic 45.0%
! ACTCTTCGTGTTTTCTGCGT+CGG - chr8_1:56222537-56222556 Msa1202620:three_prime_UTR 45.0%
GGAGTGAATCGGAGATGAAA+CGG + chr8_1:56222590-56222609 None:intergenic 45.0%
TGCTTGGCTCATTACGGAAA+CGG + chr8_1:56222802-56222821 None:intergenic 45.0%
ATCGTTCACTTCTCTTCCAC+TGG - chr8_1:56222914-56222933 Msa1202620:intron 45.0%
TCGTTCACTTCTCTTCCACT+GGG - chr8_1:56222915-56222934 Msa1202620:intron 45.0%
CGGTTGAAACAATGAGCTTC+GGG + chr8_1:56222944-56222963 None:intergenic 45.0%
TTCCAACGTAAGGTTCCGTT+TGG + chr8_1:56222977-56222996 None:intergenic 45.0%
GGATGGTAGTTGGAAGGATT+CGG - chr8_1:56223093-56223112 Msa1202620:intron 45.0%
GTTGGAAGGATTCGGAGTTT+AGG - chr8_1:56223101-56223120 Msa1202620:intron 45.0%
TGGAAGGATTCGGAGTTTAG+GGG - chr8_1:56223103-56223122 Msa1202620:intron 45.0%
! GTTTTTCATGCTACTGGGGT+TGG - chr8_1:56223239-56223258 Msa1202620:intron 45.0%
!! TCCTGTCTCTTAGGGTGTTT+TGG - chr8_1:56224131-56224150 Msa1202620:CDS 45.0%
TCCAAAACACCCTAAGAGAC+AGG + chr8_1:56224135-56224154 None:intergenic 45.0%
GAGGTAGCAGACTACATAGT+TGG - chr8_1:56224168-56224187 Msa1202620:CDS 45.0%
GTAGCAGACTACATAGTTGG+AGG - chr8_1:56224171-56224190 Msa1202620:CDS 45.0%
TGTCTAATGCTCCCACACTA+AGG + chr8_1:56224257-56224276 None:intergenic 45.0%
!! TAGTGTGGGAGCATTAGACA+TGG - chr8_1:56224257-56224276 Msa1202620:intron 45.0%
GGTCAAAGTCGTAGGATAGT+GGG + chr8_1:56224473-56224492 None:intergenic 45.0%
TGGTCAAAGTCGTAGGATAG+TGG + chr8_1:56224474-56224493 None:intergenic 45.0%
CTTGCTTTGGTCAAAGTCGT+AGG + chr8_1:56224481-56224500 None:intergenic 45.0%
TCGTGTTTGCCTTCCAGAAA+AGG - chr8_1:56224718-56224737 Msa1202620:intron 45.0%
CGTGTTTGCCTTCCAGAAAA+GGG - chr8_1:56224719-56224738 Msa1202620:intron 45.0%
GTTGTGTATTGTGCAGGTGA+AGG - chr8_1:56224945-56224964 Msa1202620:intron 45.0%
TGGACATGTTGGACAGTTTC+AGG + chr8_1:56225081-56225100 None:intergenic 45.0%
ACTGTCCAACATGTCCATGA+AGG - chr8_1:56225084-56225103 Msa1202620:CDS 45.0%
CAGAACCTTCATGGACATGT+TGG + chr8_1:56225092-56225111 None:intergenic 45.0%
GAATTCCCAGATGCAAAACC+AGG - chr8_1:56225156-56225175 Msa1202620:CDS 45.0%
!!! GAGAACCTGGTTTTGCATCT+GGG + chr8_1:56225164-56225183 None:intergenic 45.0%
!!! TGAGAACCTGGTTTTGCATC+TGG + chr8_1:56225165-56225184 None:intergenic 45.0%
! ATTCTGTCTTTCTAGTGGCC+CGG - chr8_1:56225257-56225276 Msa1202620:CDS 45.0%
CTATAATTGGAGCTGGTGCT+GGG - chr8_1:56225593-56225612 Msa1202620:intron 45.0%
TCTGCCAAGTTTGAAGAAGC+TGG - chr8_1:56225625-56225644 Msa1202620:intron 45.0%
TCCTCCAGCTTCTTCAAACT+TGG + chr8_1:56225632-56225651 None:intergenic 45.0%
! CATGGCCAATGAAGTTTTGC+CGG - chr8_1:56225756-56225775 Msa1202620:CDS 45.0%
!! GCAGAAAGCACTTAGTGTCT+AGG - chr8_1:56226053-56226072 Msa1202620:CDS 45.0%
GATTCATTGCTGCCTTGACA+AGG + chr8_1:56226541-56226560 None:intergenic 45.0%
!! AAGAAGGTACCTGTTCTTGC+TGG - chr8_1:56226612-56226631 Msa1202620:CDS 45.0%
AAGTGATCCATTCGTCGGAA+GGG + chr8_1:56226654-56226673 None:intergenic 45.0%
GGATCACTTCCTTAAACAGG+TGG - chr8_1:56226665-56226684 Msa1202620:CDS 45.0%
CAGTAGACTCCACCTGTTTA+AGG + chr8_1:56226677-56226696 None:intergenic 45.0%
CTTAAACAGGTGGAGTCTAC+TGG - chr8_1:56226675-56226694 Msa1202620:CDS 45.0%
CCATCATACAACCCAACAGT+TGG + chr8_1:56226723-56226742 None:intergenic 45.0%
! CCAACTGTTGGGTTGTATGA+TGG - chr8_1:56226720-56226739 Msa1202620:intron 45.0%
AACAGGAATGGGATACAGGT+AGG - chr8_1:56226767-56226786 Msa1202620:intron 45.0%
TGGGATACAGGTAGGTGTTA+TGG - chr8_1:56226775-56226794 Msa1202620:intron 45.0%
! GGGATACAGGTAGGTGTTAT+GGG - chr8_1:56226776-56226795 Msa1202620:intron 45.0%
CATATGGGTCTAACCACAAC+AGG - chr8_1:56226994-56227013 Msa1202620:intron 45.0%
CTATTGCAGATGCAGCACAT+AGG - chr8_1:56227073-56227092 Msa1202620:intron 45.0%
GGCACAACACAATGGCATTA+GGG + chr8_1:56227104-56227123 None:intergenic 45.0%
TGGCACAACACAATGGCATT+AGG + chr8_1:56227105-56227124 None:intergenic 45.0%
AATGCCATTGTGTTGTGCCA+TGG - chr8_1:56227105-56227124 Msa1202620:intron 45.0%
AGGATATGTGCATACCTCCA+TGG + chr8_1:56227125-56227144 None:intergenic 45.0%
! ATGGAGGTATGCACATATCC+TGG - chr8_1:56227124-56227143 Msa1202620:intron 45.0%
ACGCACACAGCTCAAACTTA+AGG + chr8_1:56227291-56227310 None:intergenic 45.0%
GTGAGAAAGAGGAAAAAGGG+GGG - chr8_1:56227413-56227432 Msa1202620:intron 45.0%
CTTGAAGTTGACCTTAGGTG+AGG - chr8_1:56227465-56227484 Msa1202620:intron 45.0%
GTTGACCTTAGGTGAGGAAA+TGG - chr8_1:56227471-56227490 Msa1202620:intron 45.0%
GGTAAGAGATCCATTGAGAG+TGG - chr8_1:56227750-56227769 Msa1202620:CDS 45.0%
GAATATGCAGGCCCAATTTC+TGG - chr8_1:56228027-56228046 Msa1202620:CDS 45.0%
CCTCTTCTGGACCAGAAATT+GGG + chr8_1:56228041-56228060 None:intergenic 45.0%
AAGAGAACCAAAGGAGTCCA+TGG - chr8_1:56228075-56228094 Msa1202620:CDS 45.0%
ACTTGTGATAGCCTGTTCCA+CGG + chr8_1:56228133-56228152 None:intergenic 45.0%
!! TTGTTGAATAGTGGGCGAGG+AGG + chr8_1:56222481-56222500 None:intergenic 50.0%
GAAAACACGAAGAGTGGTGG+GGG + chr8_1:56222532-56222551 None:intergenic 50.0%
GCAGAAAACACGAAGAGTGG+TGG + chr8_1:56222535-56222554 None:intergenic 50.0%
GACGCAGAAAACACGAAGAG+TGG + chr8_1:56222538-56222557 None:intergenic 50.0%
GAGATTGGAGCGGAGTGAAT+CGG + chr8_1:56222601-56222620 None:intergenic 50.0%
! GAGTTTGGGGGAAGTGTGAT+CGG + chr8_1:56222634-56222653 None:intergenic 50.0%
ACGACGACGATGTCGAGTTT+GGG + chr8_1:56222648-56222667 None:intergenic 50.0%
!!! AGGTTTTGGTTGGGTTGGAG+CGG + chr8_1:56222682-56222701 None:intergenic 50.0%
!!! GGTGAAGGTTTTGGTTGGGT+TGG + chr8_1:56222687-56222706 None:intergenic 50.0%
TTGCCTCTGTCTTGTGGAAG+AGG + chr8_1:56222777-56222796 None:intergenic 50.0%
!! AATTCCGATCAGAGCATCGC+CGG - chr8_1:56222846-56222865 Msa1202620:intron 50.0%
CGTTCACTTCTCTTCCACTG+GGG - chr8_1:56222916-56222935 Msa1202620:intron 50.0%
AACCGTAGCTAGTGGCCAAA+CGG - chr8_1:56222959-56222978 Msa1202620:intron 50.0%
TTCCGTTTGGCCACTAGCTA+CGG + chr8_1:56222964-56222983 None:intergenic 50.0%
TTTCATGCTACTGGGGTTGG+TGG - chr8_1:56223242-56223261 Msa1202620:intron 50.0%
!! TGAGAGCGCTCTATGAAGTC+AGG - chr8_1:56223663-56223682 Msa1202620:intron 50.0%
!! GAGAGCGCTCTATGAAGTCA+GGG - chr8_1:56223664-56223683 Msa1202620:intron 50.0%
!! GAAGTCAGGGACTAGTTTGG+TGG - chr8_1:56223677-56223696 Msa1202620:intron 50.0%
AATCCCCTTGGTCCTTAGTG+TGG - chr8_1:56224242-56224261 Msa1202620:intron 50.0%
ATCCCCTTGGTCCTTAGTGT+GGG - chr8_1:56224243-56224262 Msa1202620:intron 50.0%
TTGTTCGCATGAGCGAAACC+TGG + chr8_1:56224631-56224650 None:intergenic 50.0%
TTCGCTCATGCGAACAACAG+TGG - chr8_1:56224634-56224653 Msa1202620:intron 50.0%
! AGAAGTACACCAGTTGCCTC+TGG + chr8_1:56224785-56224804 None:intergenic 50.0%
ACAGTTTCAGGAATGGCTGC+TGG + chr8_1:56225069-56225088 None:intergenic 50.0%
CCAGCACCAGCTCCAATTAT+AGG + chr8_1:56225595-56225614 None:intergenic 50.0%
CCTATAATTGGAGCTGGTGC+TGG - chr8_1:56225592-56225611 Msa1202620:intron 50.0%
GCCAAGTTTGAAGAAGCTGG+AGG - chr8_1:56225628-56225647 Msa1202620:intron 50.0%
CTGGGAGAGGTTCATTAGCA+GGG - chr8_1:56225695-56225714 Msa1202620:CDS 50.0%
! TTGTGGAATCACTCTGGGAG+AGG - chr8_1:56225990-56226009 Msa1202620:intron 50.0%
! TGTGGAATCACTCTGGGAGA+GGG - chr8_1:56225991-56226010 Msa1202620:intron 50.0%
AAGATGTTAGGGGGGACAGT+AGG - chr8_1:56226023-56226042 Msa1202620:CDS 50.0%
AACTGATCCCTTCCGACGAA+TGG - chr8_1:56226644-56226663 Msa1202620:CDS 50.0%
GAAGTGATCCATTCGTCGGA+AGG + chr8_1:56226655-56226674 None:intergenic 50.0%
TGGAGTCTACTGGGTTCTCT+GGG - chr8_1:56226685-56226704 Msa1202620:intron 50.0%
CTAACCACAACAGGCTCCAT+AGG - chr8_1:56227003-56227022 Msa1202620:intron 50.0%
ACCTCCATGGCACAACACAA+TGG + chr8_1:56227112-56227131 None:intergenic 50.0%
ACAGCTCAAACTTAAGGCCC+AGG + chr8_1:56227285-56227304 None:intergenic 50.0%
CGTTCCCATTTCCTCACCTA+AGG + chr8_1:56227479-56227498 None:intergenic 50.0%
!! CCCAATTTCTGGTCCAGAAG+AGG - chr8_1:56228038-56228057 Msa1202620:CDS 50.0%
GCCTCTTCTGGACCAGAAAT+TGG + chr8_1:56228042-56228061 None:intergenic 50.0%
AAGCATGGAAAGACTACCCG+TGG - chr8_1:56228113-56228132 Msa1202620:CDS 50.0%
CTTGTGATAGCCTGTTCCAC+GGG + chr8_1:56228132-56228151 None:intergenic 50.0%
AGAAGCGGTGGAGATTGGAG+CGG + chr8_1:56222611-56222630 None:intergenic 55.0%
ATCGGAGAAGCGGTGGAGAT+TGG + chr8_1:56222616-56222635 None:intergenic 55.0%
AAGTGTGATCGGAGAAGCGG+TGG + chr8_1:56222623-56222642 None:intergenic 55.0%
! GGGAAGTGTGATCGGAGAAG+CGG + chr8_1:56222626-56222645 None:intergenic 55.0%
GACGACGATGTCGAGTTTGG+GGG + chr8_1:56222646-56222665 None:intergenic 55.0%
CGACGACGATGTCGAGTTTG+GGG + chr8_1:56222647-56222666 None:intergenic 55.0%
GACGACGACGATGTCGAGTT+TGG + chr8_1:56222649-56222668 None:intergenic 55.0%
!!! TTTTGGTTGGGTTGGAGCGG+TGG + chr8_1:56222679-56222698 None:intergenic 55.0%
TCTGTCTTGTGGAAGAGGCG+TGG + chr8_1:56222772-56222791 None:intergenic 55.0%
ACGCCTCTTCCACAAGACAG+AGG - chr8_1:56222771-56222790 Msa1202620:CDS 55.0%
ACGGCTTTGCCTCTGTCTTG+TGG + chr8_1:56222783-56222802 None:intergenic 55.0%
GGCGATGCTCTGATCGGAAT+TGG + chr8_1:56222847-56222866 None:intergenic 55.0%
AACTCCGGCGATGCTCTGAT+CGG + chr8_1:56222853-56222872 None:intergenic 55.0%
!! CAGAGCATCGCCGGAGTTAT+CGG - chr8_1:56222855-56222874 Msa1202620:intron 55.0%
GGCCAAACGGAACCTTACGT+TGG - chr8_1:56222972-56222991 Msa1202620:intron 55.0%
CCGGCAACATCAACAATCGC+CGG + chr8_1:56223020-56223039 None:intergenic 55.0%
CCGGCGATTGTTGATGTTGC+CGG - chr8_1:56223017-56223036 Msa1202620:intron 55.0%
!! CAATGCTGCTGCTGCTTTCG+CGG - chr8_1:56223070-56223089 Msa1202620:intron 55.0%
!! AATGCTGCTGCTGCTTTCGC+GGG - chr8_1:56223071-56223090 Msa1202620:intron 55.0%
!! ATGCTACTGGGGTTGGTGGT+AGG - chr8_1:56223246-56223265 Msa1202620:intron 55.0%
!! TGCTACTGGGGTTGGTGGTA+GGG - chr8_1:56223247-56223266 Msa1202620:intron 55.0%
CTCCCACACTAAGGACCAAG+GGG + chr8_1:56224248-56224267 None:intergenic 55.0%
GCTCCCACACTAAGGACCAA+GGG + chr8_1:56224249-56224268 None:intergenic 55.0%
TGCTCCCACACTAAGGACCA+AGG + chr8_1:56224250-56224269 None:intergenic 55.0%
GTTTCAGGAATGGCTGCTGG+TGG + chr8_1:56225066-56225085 None:intergenic 55.0%
! TGTACAACTCAGGGCGCTTC+CGG - chr8_1:56225668-56225687 Msa1202620:CDS 55.0%
ATGAACCTCTCCCAGCCATC+CGG + chr8_1:56225690-56225709 None:intergenic 55.0%
GCTGGGAGAGGTTCATTAGC+AGG - chr8_1:56225694-56225713 Msa1202620:CDS 55.0%
GCACACACACCAGCAAGAAC+AGG + chr8_1:56226624-56226643 None:intergenic 55.0%
GTGGAGTCTACTGGGTTCTC+TGG - chr8_1:56226684-56226703 Msa1202620:intron 55.0%
GGAGTCTACTGGGTTCTCTG+GGG - chr8_1:56226686-56226705 Msa1202620:intron 55.0%
TGCACCTATGGAGCCTGTTG+TGG + chr8_1:56227010-56227029 None:intergenic 55.0%
GCCATTGTGTTGTGCCATGG+AGG - chr8_1:56227108-56227127 Msa1202620:intron 55.0%
GGAAAGACTACCCGTGGAAC+AGG - chr8_1:56228119-56228138 Msa1202620:CDS 55.0%
! AACACGAAGAGTGGTGGGGG+TGG + chr8_1:56222529-56222548 None:intergenic 60.0%
! AAGAGGCGTGGTGGCTGTGT+CGG + chr8_1:56222760-56222779 None:intergenic 60.0%
! GTCTTGTGGAAGAGGCGTGG+TGG + chr8_1:56222769-56222788 None:intergenic 60.0%
ATCGCCGGAGTTATCGGCGT+TGG - chr8_1:56222861-56222880 Msa1202620:intron 60.0%
ACCGCCAACGCCGATAACTC+CGG + chr8_1:56222868-56222887 None:intergenic 60.0%
!! GTTATCGGCGTTGGCGGTAG+CGG - chr8_1:56222870-56222889 Msa1202620:intron 60.0%
ATGAGCTTCGGGATCCCCAG+TGG + chr8_1:56222933-56222952 None:intergenic 60.0%
!! ATGCTGCTGCTGCTTTCGCG+GGG - chr8_1:56223072-56223091 Msa1202620:intron 60.0%
GCTTTCGCGGGGATGGTAGT+TGG - chr8_1:56223083-56223102 Msa1202620:intron 60.0%
TCGCGGGGATGGTAGTTGGA+AGG - chr8_1:56223087-56223106 Msa1202620:intron 60.0%
!! TGGGGTTGGTGGTAGGGCTA+TGG - chr8_1:56223253-56223272 Msa1202620:intron 60.0%
! ATTGGAGCTGGTGCTGGGAC+CGG - chr8_1:56225598-56225617 Msa1202620:intron 60.0%
TAGGGGGGACAGTAGGCTGT+TGG - chr8_1:56226030-56226049 Msa1202620:CDS 60.0%
AGGGGGGACAGTAGGCTGTT+GGG - chr8_1:56226031-56226050 Msa1202620:CDS 60.0%
ATCTAGCTGCGCCTGACCTC+AGG + chr8_1:56226453-56226472 None:intergenic 60.0%
! GCCGGAGTTATCGGCGTTGG+CGG - chr8_1:56222864-56222883 Msa1202620:intron 65.0%
!! TGCTGCTGCTTTCGCGGGGA+TGG - chr8_1:56223076-56223095 Msa1202620:intron 65.0%
! TTGGAGCTGGTGCTGGGACC+GGG - chr8_1:56225599-56225618 Msa1202620:intron 65.0%
! CAACTCAGGGCGCTTCCGGA+TGG - chr8_1:56225672-56225691 Msa1202620:CDS 65.0%
! TGGCTGTGTCGGCGGTGTCG+TGG + chr8_1:56222749-56222768 None:intergenic 70.0%
AGGCGTGGTGGCTGTGTCGG+CGG + chr8_1:56222757-56222776 None:intergenic 70.0%
!! ATCGGCGTTGGCGGTAGCGG+AGG - chr8_1:56222873-56222892 Msa1202620:intron 70.0%
! TCAGGGCGCTTCCGGATGGC+TGG - chr8_1:56225676-56225695 Msa1202620:CDS 70.0%
! CAGGGCGCTTCCGGATGGCT+GGG - chr8_1:56225677-56225696 Msa1202620:CDS 70.0%
CGCTTCCGGATGGCTGGGAG+AGG - chr8_1:56225682-56225701 Msa1202620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 56222396 56228446 56222396 ID=Msa1202620;Name=Msa1202620
chr8_1 mRNA 56222396 56228446 56222396 ID=Msa1202620-mRNA-1;Parent=Msa1202620;Name=Msa1202620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=114|1|1|1|1|1|8|258|755
chr8_1 exon 56222396 56222805 56222396 ID=Msa1202620-mRNA-1:exon:18272;Parent=Msa1202620-mRNA-1
chr8_1 exon 56223713 56223966 56223713 ID=Msa1202620-mRNA-1:exon:18271;Parent=Msa1202620-mRNA-1
chr8_1 exon 56224058 56224236 56224058 ID=Msa1202620-mRNA-1:exon:18270;Parent=Msa1202620-mRNA-1
chr8_1 exon 56225065 56225312 56225065 ID=Msa1202620-mRNA-1:exon:18269;Parent=Msa1202620-mRNA-1
chr8_1 exon 56225665 56225881 56225665 ID=Msa1202620-mRNA-1:exon:18268;Parent=Msa1202620-mRNA-1
chr8_1 exon 56225995 56226210 56225995 ID=Msa1202620-mRNA-1:exon:18267;Parent=Msa1202620-mRNA-1
chr8_1 exon 56226492 56226698 56226492 ID=Msa1202620-mRNA-1:exon:18266;Parent=Msa1202620-mRNA-1
chr8_1 exon 56227538 56228446 56227538 ID=Msa1202620-mRNA-1:exon:18265;Parent=Msa1202620-mRNA-1
chr8_1 five_prime_UTR 56228333 56228446 56228333 ID=Msa1202620-mRNA-1:five_prime_utr;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56227538 56228332 56227538 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56226492 56226698 56226492 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56225995 56226210 56225995 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56225665 56225881 56225665 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56225065 56225312 56225065 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56224058 56224236 56224058 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56223713 56223966 56223713 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 CDS 56222654 56222805 56222654 ID=Msa1202620-mRNA-1:cds;Parent=Msa1202620-mRNA-1
chr8_1 three_prime_UTR 56222396 56222653 56222396 ID=Msa1202620-mRNA-1:three_prime_utr;Parent=Msa1202620-mRNA-1
Gene Sequence

>Msa1202620

ATGGCACATCACACAACCACCCCCACCACTCTTCGTGTTTTCTGCGTCGGAACCTTAGACACTAAGCTCAACGAACTCCGTTTCATCTCCGATTCACTCCGCTCCAATCTCCACCGCTTCTCCGATCACACTTCCCCCAAACTCGACATCGTCGTCGTCGATGTTTCCACCGCTCCAACCCAACCAAAACCTTCACCAGATTTCACATTCATCTCCAGAAACGAAGTTCTCTCATACCACGACACCGCCGACACAGCCACCACGCCTCTTCCACAAGACAGAGGCAAAGCCGTTTCCGTAATGAGCCAAGCACTTCAACATTTCTTACAAAAATCCAATTCCGATCAGAGCATCGCCGGAGTTATCGGCGTTGGCGGTAGCGGAGGTACATCACTGTTATCATCATCGTTCACTTCTCTTCCACTGGGGATCCCGAAGCTCATTGTTTCAACCGTAGCTAGTGGCCAAACGGAACCTTACGTTGGAACTTCTGATTTAGTGTTGTTTCCGGCGATTGTTGATGTTGCCGGTGTTAATAGTGTTAGCAGAGTGGTTTTTAACAATGCTGCTGCTGCTTTCGCGGGGATGGTAGTTGGAAGGATTCGGAGTTTAGGGGATTCGCCGCGAGTTGATGATAAGTTTACTGTTGGTATAACTATGTTTGGAGTTACTACTCCTTGTGTTGATGCTGTTAGAGATAGGTTGCATAAAGAGGGTTATGAGAGTTTGGTTTTTCATGCTACTGGGGTTGGTGGTAGGGCTATGGAGAATTTGATTAGAGAGGGGTTTATACAGGGTGTTTTGGACATCACAACAACAGAGGTAGCAGACTACATAGTTGGAGGTGTAATGGCTTGCGACAGTTCCCGCTTTGATGTCATAATAGAGAAGAAAATCCCCTTGGTCCTTAGTGTGGGAGCATTAGACATGGTGAACTTTGGAGCAAAAGATACCATACCAGAGAGTTTTCAGCAAAGAAATATATATGAACACAATAAGCAGGTTTCGCTCATGCGAACAACAGTGGACGAGAACAGAAAATTTGCCGATTTTATAGCAAATAAACTGAACAGGTCATCATCTAAGATTCGTGTTTGCCTTCCAGAAAAGGGTATATCTGCTTTAGATGCTCCAGGTAAACCTTTTTATGATCCAGAGGCAACTGGTGTACTTCTTCATGAATTACAAAGGCTTATTCAGACTGATGATATTCGACAGGTGAAGGTGTATCCCCATCATATCAATGACCTTGAATTTGCAAATGCACTAGTTGATGCATTTTTAGAGGTTAATCCGAAAACTGTTAAAGATTCTTCTCATCCACCAGCAGCCATTCCTGAAACTGTCCAACATGTCCATGAAGGTTCTGTTTCGAATAAATCAAGCTTTGGGACCATTGTTTACACACCTAGTGAATTCCCAGATGCAAAACCAGAAACTTTGGAGAAAACACAGCTAATATTGCAGCAATTTAAAGATCAAATAGATAAAGGAATTCCTATAATTGGAGCTGGTGCTGGGACCGGGATATCTGCCAAGTTTGAAGAAGCTGGAGGAGTTGATCTAATAGTTTTGTACAACTCAGGGCGCTTCCGGATGGCTGGGAGAGGTTCATTAGCAGGGTTGTTGCCATTTGCTGATGCTAATGCTGTTGTGCTTGACATGGCCAATGAAGTTTTGCCGGTGGTAAAGAAGGTACCTGTTCTTGCTGGTGTGTGTGCAACTGATCCCTTCCGACGAATGGATCACTTCCTTAAACAGGTGGAGTCTACTGGGTTCTCTGGGGTACAAAATTTTCCAACTGTTGGGTTGTATGATGGTAATTTTAGGCAAAATCTTGAAGAAACAGGAATGGGATACAGCTTGGAAGTGGAGATGATCCAAAAAGCCCATAAAATGGGTCTCTTGACAACTCCTTATGCATTCAATCAACATGAAGCTATTGAAATGGCTAAAGTTGGTGCCGATATTATTGTAGCTCATATGGGTCTAACCACAACAGGCTCCATAGGTGCAAAAACAGCTCTTTCACTTGAGGAAAGTGTAGTTCTTGTACAAGCTATTGCAGATGCAGCACATAGGGTCAACCCTAATGCCATTGTGTTGTGCCATGGAGGCCCAATTTCTGGTCCAGAAGAGGCAGAATTTATATTGAAGAGAACCAAAGGAGTCCATGGTTTTTATGGGGCTTCAAGCATGGAAAGACTACCCGTGGAACAGGCTATCACAAGTACAGTCAAACAATACAAGTCAATTTCTATTCATTGA

Protein sequence

>Msa1202620

MAHHTTTPTTLRVFCVGTLDTKLNELRFISDSLRSNLHRFSDHTSPKLDIVVVDVSTAPTQPKPSPDFTFISRNEVLSYHDTADTATTPLPQDRGKAVSVMSQALQHFLQKSNSDQSIAGVIGVGGSGGTSLLSSSFTSLPLGIPKLIVSTVASGQTEPYVGTSDLVLFPAIVDVAGVNSVSRVVFNNAAAAFAGMVVGRIRSLGDSPRVDDKFTVGITMFGVTTPCVDAVRDRLHKEGYESLVFHATGVGGRAMENLIREGFIQGVLDITTTEVADYIVGGVMACDSSRFDVIIEKKIPLVLSVGALDMVNFGAKDTIPESFQQRNIYEHNKQVSLMRTTVDENRKFADFIANKLNRSSSKIRVCLPEKGISALDAPGKPFYDPEATGVLLHELQRLIQTDDIRQVKVYPHHINDLEFANALVDAFLEVNPKTVKDSSHPPAAIPETVQHVHEGSVSNKSSFGTIVYTPSEFPDAKPETLEKTQLILQQFKDQIDKGIPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTGFSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQHEAIEMAKVGADIIVAHMGLTTTGSIGAKTALSLEESVVLVQAIADAAHRVNPNAIVLCHGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISIH*