Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328480 | XP_003629403.1 | 94.982 | 558 | 26 | 2 | 1 | 558 | 1 | 556 | 0.0 | 1022 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328480 | sp|A7M6E8|TM1S_SOLLC | 66.187 | 556 | 179 | 2 | 12 | 562 | 10 | 561 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328480 | G7LDW3 | 94.982 | 558 | 26 | 2 | 1 | 558 | 1 | 556 | 0.0 | 1022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1202510 | Msa1328480 | 0.875576 | 2.764188e-68 | -8.615850e-47 |
| Msa1202620 | Msa1328480 | 0.821849 | 3.244986e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328480 | MtrunA17_Chr8g0372721 | 94.982 | 558 | 26 | 2 | 1 | 558 | 1 | 556 | 0.0 | 1022 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328480 | AT5G66420.2 | 68.336 | 559 | 168 | 5 | 10 | 562 | 5 | 560 | 0.0 | 704 |
| Msa1328480 | AT5G66420.3 | 68.336 | 559 | 168 | 5 | 10 | 562 | 5 | 560 | 0.0 | 703 |
| Msa1328480 | AT5G66420.1 | 72.198 | 464 | 124 | 3 | 101 | 562 | 1 | 461 | 0.0 | 617 |
Find 155 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGTCTCTTAGGGTGTTT+TGG | 0.175673 | 8_4:-46335560 | Msa1328480:intron |
| TGGACATGTTGGACAGTTTC+AGG | 0.191901 | 8_4:+46334613 | None:intergenic |
| GATAAAGGAATTCCTATAAT+TGG | 0.203295 | 8_4:-46334111 | Msa1328480:CDS |
| GTATGAGAGAACTTCGTTTC+TGG | 0.209114 | 8_4:+46336966 | None:intergenic |
| ATTAAAATCTTGTTGAATAG+TGG | 0.228395 | 8_4:+46337203 | None:intergenic |
| TTGGAAGGATTCGGAGTTTA+GGG | 0.234485 | 8_4:-46336588 | Msa1328480:CDS |
| TTCTGATTTAGTGTTGTTTC+CGG | 0.241724 | 8_4:-46336692 | Msa1328480:CDS |
| GTTGGAAGGATTCGGAGTTT+AGG | 0.281805 | 8_4:-46336589 | Msa1328480:CDS |
| ATGCTACTGGGGTTGGTGGT+AGG | 0.296691 | 8_4:-46336444 | Msa1328480:CDS |
| TAAAGAGGGTTATGAGAGTT+TGG | 0.306047 | 8_4:-46336473 | Msa1328480:CDS |
| GTTGCCTCTGGATCATAAAA+AGG | 0.311577 | 8_4:+46334921 | None:intergenic |
| CCAGCACCAGCTCCAATTAT+AGG | 0.313229 | 8_4:+46334099 | None:intergenic |
| TCAGGGCGCTTCCGGATGGC+TGG | 0.318709 | 8_4:-46334015 | Msa1328480:CDS |
| ATCGTTCACTTCTCTTCCAC+TGG | 0.330759 | 8_4:-46336776 | Msa1328480:CDS |
| CCGGCGATTGTTGATGTTGC+CGG | 0.336777 | 8_4:-46336673 | Msa1328480:CDS |
| GTTTCGAATAAATCAAGCTT+TGG | 0.339409 | 8_4:-46334580 | Msa1328480:CDS |
| GGCGATGCTCTGATCGGAAT+TGG | 0.348691 | 8_4:+46336846 | None:intergenic |
| TATTCGAAACAGAACCTTCA+TGG | 0.349418 | 8_4:+46334593 | None:intergenic |
| GTGAAATCTGGTGAAGGTTT+TGG | 0.353239 | 8_4:+46336997 | None:intergenic |
| TTCGTTGAGCTTAGTGTCTA+AGG | 0.353826 | 8_4:+46337128 | None:intergenic |
| TTTCGAATAAATCAAGCTTT+GGG | 0.363828 | 8_4:-46334579 | Msa1328480:CDS |
| CAATGCTGCTGCTGCTTTCG+CGG | 0.366932 | 8_4:-46336620 | Msa1328480:CDS |
| TGTACAACTCAGGGCGCTTC+CGG | 0.367533 | 8_4:-46334023 | Msa1328480:CDS |
| CCTATAATTGGAGCTGGTGC+TGG | 0.368558 | 8_4:-46334099 | Msa1328480:CDS |
| GACGACGACGATGTCGAGTT+TGG | 0.370363 | 8_4:+46337044 | None:intergenic |
| CAGTTTATTTGCTATAAAAT+CGG | 0.373046 | 8_4:+46335016 | None:intergenic |
| ACGACGACGATGTCGAGTTT+GGG | 0.373119 | 8_4:+46337045 | None:intergenic |
| ATTTCTATTGGCAGAAACTT+TGG | 0.377740 | 8_4:-46334175 | Msa1328480:intron |
| ACTGTTGGTATAACTATGTT+TGG | 0.381548 | 8_4:-46336538 | Msa1328480:CDS |
| TTTAAAGATCAAATAGATAA+AGG | 0.388535 | 8_4:-46334126 | Msa1328480:CDS |
| GCTTTCGCGGGGATGGTAGT+TGG | 0.393619 | 8_4:-46336607 | Msa1328480:CDS |
| CGGTTGAAACAATGAGCTTC+GGG | 0.395860 | 8_4:+46336749 | None:intergenic |
| ATCGGAGAAGCGGTGGAGAT+TGG | 0.396280 | 8_4:+46337077 | None:intergenic |
| CAGAGCATCGCCGGAGTTAT+CGG | 0.396375 | 8_4:-46336835 | Msa1328480:CDS |
| TTGAAGTGCTTGGCTCATTA+CGG | 0.400952 | 8_4:+46336885 | None:intergenic |
| AATGCTGCTGCTGCTTTCGC+GGG | 0.402218 | 8_4:-46336619 | Msa1328480:CDS |
| TGCTGCTGCTTTCGCGGGGA+TGG | 0.405453 | 8_4:-46336614 | Msa1328480:CDS |
| GATTAGAGAGGGGTTTATAC+AGG | 0.412056 | 8_4:-46336407 | Msa1328480:intron |
| TGCTACTGGGGTTGGTGGTA+GGG | 0.413980 | 8_4:-46336443 | Msa1328480:CDS |
| TCCTCCAGCTTCTTCAAACT+TGG | 0.422732 | 8_4:+46334062 | None:intergenic |
| TGGGGTTGGTGGTAGGGCTA+TGG | 0.428818 | 8_4:-46336437 | Msa1328480:CDS |
| ATTCAAGGTCATTGATATGA+TGG | 0.430606 | 8_4:+46334716 | None:intergenic |
| TCGTGTTTGCCTTCCAGAAA+AGG | 0.434590 | 8_4:-46334973 | Msa1328480:CDS |
| GGATGGTAGTTGGAAGGATT+CGG | 0.439718 | 8_4:-46336597 | Msa1328480:CDS |
| ATTGGAGCTGGTGCTGGGAC+CGG | 0.439807 | 8_4:-46334093 | Msa1328480:CDS |
| TTGCCTCTGTCTTGTGGAAG+AGG | 0.440747 | 8_4:+46336916 | None:intergenic |
| CTAGTGCATTTGCAAATTCA+AGG | 0.443766 | 8_4:+46334701 | None:intergenic |
| GCATTAGACATGGTGAACTT+TGG | 0.447128 | 8_4:-46335424 | Msa1328480:CDS |
| TTCCAACGTAAGGTTCCGTT+TGG | 0.447456 | 8_4:+46336716 | None:intergenic |
| TTTCTTTGCTGAAAACTCTC+TGG | 0.449471 | 8_4:+46335385 | None:intergenic |
| TTATAGCAAATAAACTGAAC+AGG | 0.450455 | 8_4:-46335010 | Msa1328480:CDS |
| ACGGTTGAAACAATGAGCTT+CGG | 0.451533 | 8_4:+46336748 | None:intergenic |
| CGCTTCCGGATGGCTGGGAG+AGG | 0.452905 | 8_4:-46334009 | Msa1328480:CDS |
| GAGGTAGCAGACTACATAGT+TGG | 0.454554 | 8_4:-46335523 | Msa1328480:CDS |
| TTCCGTTTGGCCACTAGCTA+CGG | 0.457357 | 8_4:+46336729 | None:intergenic |
| GCTGGGAGAGGTTCATTAGC+AGG | 0.457648 | 8_4:-46333997 | Msa1328480:CDS |
| GTTATCGGCGTTGGCGGTAG+CGG | 0.458736 | 8_4:-46336820 | Msa1328480:CDS |
| AAGAGGCGTGGTGGCTGTGT+CGG | 0.464483 | 8_4:+46336933 | None:intergenic |
| TTCAAACTTGGCAGATATCC+CGG | 0.468179 | 8_4:+46334074 | None:intergenic |
| ATGGAGAATTTGATTAGAGA+GGG | 0.469127 | 8_4:-46336418 | Msa1328480:CDS |
| ACATACCGGCAAAACTTCAT+TGG | 0.469735 | 8_4:+46333930 | None:intergenic |
| TGCTTGGCTCATTACGGAAA+CGG | 0.470622 | 8_4:+46336891 | None:intergenic |
| CTACATAGTTGGAGGTGTAA+TGG | 0.471501 | 8_4:-46335512 | Msa1328480:CDS |
| CGTGTTTGCCTTCCAGAAAA+GGG | 0.477764 | 8_4:-46334972 | Msa1328480:CDS |
| CTGGAGATGAATGTGAAATC+TGG | 0.480275 | 8_4:+46336985 | None:intergenic |
| GTGTTGATGCTGTTAGAGAT+AGG | 0.480492 | 8_4:-46336501 | Msa1328480:CDS |
| TTTCATGCTACTGGGGTTGG+TGG | 0.481155 | 8_4:-46336448 | Msa1328480:CDS |
| GTAAGAAATGTTGAAGTGCT+TGG | 0.484412 | 8_4:+46336875 | None:intergenic |
| TTGGAGCTGGTGCTGGGACC+GGG | 0.488582 | 8_4:-46334092 | Msa1328480:CDS |
| ACGGCTTTGCCTCTGTCTTG+TGG | 0.488610 | 8_4:+46336910 | None:intergenic |
| TTGCTGAAAACTCTCTGGTA+TGG | 0.489290 | 8_4:+46335390 | None:intergenic |
| CTATAATTGGAGCTGGTGCT+GGG | 0.491055 | 8_4:-46334098 | Msa1328480:CDS |
| GAGATTGGAGCGGAGTGAAT+CGG | 0.491499 | 8_4:+46337092 | None:intergenic |
| GCCGGAGTTATCGGCGTTGG+CGG | 0.491993 | 8_4:-46336826 | Msa1328480:CDS |
| TTTGCATCTGGGAATTCACT+AGG | 0.496951 | 8_4:+46334541 | None:intergenic |
| AGAGATAGGTTGCATAAAGA+GGG | 0.499545 | 8_4:-46336487 | Msa1328480:CDS |
| TTAAAATCTTGTTGAATAGT+GGG | 0.501359 | 8_4:+46337204 | None:intergenic |
| CAGGGCGCTTCCGGATGGCT+GGG | 0.503971 | 8_4:-46334014 | Msa1328480:CDS |
| CTCTATTATGACATCAAAGC+GGG | 0.511978 | 8_4:+46335477 | None:intergenic |
| AGAAGTACACCAGTTGCCTC+TGG | 0.512364 | 8_4:+46334909 | None:intergenic |
| ATGAACCTCTCCCAGCCATC+CGG | 0.512584 | 8_4:+46334004 | None:intergenic |
| TCTGCCAAGTTTGAAGAAGC+TGG | 0.514940 | 8_4:-46334066 | Msa1328480:CDS |
| TAGAGATAGGTTGCATAAAG+AGG | 0.515466 | 8_4:-46336488 | Msa1328480:CDS |
| AACCGTAGCTAGTGGCCAAA+CGG | 0.517646 | 8_4:-46336731 | Msa1328480:CDS |
| GTTGATGATAAGTTTACTGT+TGG | 0.517901 | 8_4:-46336553 | Msa1328480:CDS |
| TTCAAGGTCATTGATATGAT+GGG | 0.519290 | 8_4:+46334717 | None:intergenic |
| TCGTTCACTTCTCTTCCACT+GGG | 0.520818 | 8_4:-46336775 | Msa1328480:CDS |
| CGACGACGATGTCGAGTTTG+GGG | 0.527701 | 8_4:+46337046 | None:intergenic |
| ATCGCCGGAGTTATCGGCGT+TGG | 0.533332 | 8_4:-46336829 | Msa1328480:CDS |
| TCGCGGGGATGGTAGTTGGA+AGG | 0.534807 | 8_4:-46336603 | Msa1328480:CDS |
| ACCGCCAACGCCGATAACTC+CGG | 0.535032 | 8_4:+46336825 | None:intergenic |
| ATATCTGCTTTAGATGCTCC+AGG | 0.535571 | 8_4:-46334948 | Msa1328480:CDS |
| TATGGAGAATTTGATTAGAG+AGG | 0.536927 | 8_4:-46336419 | Msa1328480:CDS |
| AACTCCGGCGATGCTCTGAT+CGG | 0.539560 | 8_4:+46336840 | None:intergenic |
| ACAGTTTCAGGAATGGCTGC+TGG | 0.540216 | 8_4:+46334625 | None:intergenic |
| TATATATGAACACAATAAGC+AGG | 0.542965 | 8_4:-46335362 | Msa1328480:intron |
| CAACTCAGGGCGCTTCCGGA+TGG | 0.544432 | 8_4:-46334019 | Msa1328480:CDS |
| ACAGCATTAGCATCAGCAAA+TGG | 0.545306 | 8_4:+46333967 | None:intergenic |
| GGAATTCCTATAATTGGAGC+TGG | 0.547436 | 8_4:-46334105 | Msa1328480:CDS |
| AATTCCGATCAGAGCATCGC+CGG | 0.552505 | 8_4:-46336844 | Msa1328480:CDS |
| GGAGTGAATCGGAGATGAAA+CGG | 0.559585 | 8_4:+46337103 | None:intergenic |
| AATCCCCTTGGTCCTTAGTG+TGG | 0.560012 | 8_4:-46335449 | Msa1328480:CDS |
| TACTTCTTCATGAATTACAA+AGG | 0.560642 | 8_4:-46334893 | Msa1328480:CDS |
| TCAGACTGATGATATTCGAC+AGG | 0.561285 | 8_4:-46334865 | Msa1328480:intron |
| GAATTCCCAGATGCAAAACC+AGG | 0.561552 | 8_4:-46334535 | Msa1328480:intron |
| TGTCTAATGCTCCCACACTA+AGG | 0.562423 | 8_4:+46335437 | None:intergenic |
| ATCCCCTTGGTCCTTAGTGT+GGG | 0.567379 | 8_4:-46335448 | Msa1328480:CDS |
| AAATCAGAAGTTCCAACGTA+AGG | 0.568648 | 8_4:+46336706 | None:intergenic |
| CAGAAAACACGAAGAGTGGT+GGG | 0.570115 | 8_4:+46337159 | None:intergenic |
| AGGCGTGGTGGCTGTGTCGG+CGG | 0.576331 | 8_4:+46336936 | None:intergenic |
| AAGTGTGATCGGAGAAGCGG+TGG | 0.579853 | 8_4:+46337070 | None:intergenic |
| CTGGGAGAGGTTCATTAGCA+GGG | 0.582821 | 8_4:-46333996 | Msa1328480:CDS |
| CAGAACCTTCATGGACATGT+TGG | 0.584516 | 8_4:+46334602 | None:intergenic |
| ATTGTTTCAACCGTAGCTAG+TGG | 0.590015 | 8_4:-46336739 | Msa1328480:CDS |
| TGGCTGTGTCGGCGGTGTCG+TGG | 0.591273 | 8_4:+46336944 | None:intergenic |
| GCAGAAAACACGAAGAGTGG+TGG | 0.593483 | 8_4:+46337158 | None:intergenic |
| ATCTTGTTGAATAGTGGGCG+AGG | 0.593533 | 8_4:+46337209 | None:intergenic |
| ATGTTGGACAGTTTCAGGAA+TGG | 0.595655 | 8_4:+46334618 | None:intergenic |
| TGGAGAATTTGATTAGAGAG+GGG | 0.600490 | 8_4:-46336417 | Msa1328480:CDS |
| ATGCTGCTGCTGCTTTCGCG+GGG | 0.602053 | 8_4:-46336618 | Msa1328480:CDS |
| AATAGAGAAGAAAATCCCCT+TGG | 0.605017 | 8_4:-46335461 | Msa1328480:CDS |
| ACTGTCCAACATGTCCATGA+AGG | 0.605252 | 8_4:-46334607 | Msa1328480:CDS |
| AGAAAACACGAAGAGTGGTG+GGG | 0.608458 | 8_4:+46337160 | None:intergenic |
| GTAGCAGACTACATAGTTGG+AGG | 0.610759 | 8_4:-46335520 | Msa1328480:CDS |
| TAATGCTGTTGTGCTTGACA+TGG | 0.611095 | 8_4:-46333953 | Msa1328480:CDS |
| ATCGGCGTTGGCGGTAGCGG+AGG | 0.611183 | 8_4:-46336817 | Msa1328480:CDS |
| GACGCAGAAAACACGAAGAG+TGG | 0.615260 | 8_4:+46337155 | None:intergenic |
| TTCGCTCATGCGAACAACAG+TGG | 0.616404 | 8_4:-46335057 | Msa1328480:CDS |
| TGTTAATAGTGTTAGCAGAG+TGG | 0.616656 | 8_4:-46336650 | Msa1328480:CDS |
| GAAAACACGAAGAGTGGTGG+GGG | 0.617414 | 8_4:+46337161 | None:intergenic |
| GGGAAGTGTGATCGGAGAAG+CGG | 0.617529 | 8_4:+46337067 | None:intergenic |
| CCGGCAACATCAACAATCGC+CGG | 0.626831 | 8_4:+46336673 | None:intergenic |
| TGCTCCCACACTAAGGACCA+AGG | 0.628723 | 8_4:+46335444 | None:intergenic |
| TTCACTAGGTGTGTAAACAA+TGG | 0.631098 | 8_4:+46334555 | None:intergenic |
| GCTCCCACACTAAGGACCAA+GGG | 0.633888 | 8_4:+46335445 | None:intergenic |
| TCAAGGTCATTGATATGATG+GGG | 0.640054 | 8_4:+46334718 | None:intergenic |
| GTTTCAGGAATGGCTGCTGG+TGG | 0.640666 | 8_4:+46334628 | None:intergenic |
| TGGAAGGATTCGGAGTTTAG+GGG | 0.641478 | 8_4:-46336587 | Msa1328480:CDS |
| GTCTTGTGGAAGAGGCGTGG+TGG | 0.645418 | 8_4:+46336924 | None:intergenic |
| ATGAATGTGAAATCTGGTGA+AGG | 0.646641 | 8_4:+46336991 | None:intergenic |
| TCTGTCTTGTGGAAGAGGCG+TGG | 0.650333 | 8_4:+46336921 | None:intergenic |
| GGCCAAACGGAACCTTACGT+TGG | 0.650375 | 8_4:-46336718 | Msa1328480:CDS |
| TCTGCTAACACTATTAACAC+CGG | 0.659837 | 8_4:+46336654 | None:intergenic |
| TCTCTAACAGCATCAACACA+AGG | 0.665197 | 8_4:+46336505 | None:intergenic |
| GACGACGATGTCGAGTTTGG+GGG | 0.669216 | 8_4:+46337047 | None:intergenic |
| CTCCCACACTAAGGACCAAG+GGG | 0.674241 | 8_4:+46335446 | None:intergenic |
| GCCAAGTTTGAAGAAGCTGG+AGG | 0.688470 | 8_4:-46334063 | Msa1328480:CDS |
| ACGCCTCTTCCACAAGACAG+AGG | 0.696926 | 8_4:-46336919 | Msa1328480:CDS |
| TTGTTGAATAGTGGGCGAGG+AGG | 0.699454 | 8_4:+46337212 | None:intergenic |
| TCTCTATTATGACATCAAAG+CGG | 0.700503 | 8_4:+46335476 | None:intergenic |
| CGTTCACTTCTCTTCCACTG+GGG | 0.700969 | 8_4:-46336774 | Msa1328480:CDS |
| AGAAGCGGTGGAGATTGGAG+CGG | 0.701088 | 8_4:+46337082 | None:intergenic |
| TTTGGACATCACAACAACAG+AGG | 0.705289 | 8_4:-46335542 | Msa1328480:CDS |
| TAGTGTGGGAGCATTAGACA+TGG | 0.711178 | 8_4:-46335434 | Msa1328480:CDS |
| GTAAACTTATCATCAACTCG+CGG | 0.742358 | 8_4:+46336559 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTCAACAAGATTTTAATA+TGG | - | chr8_4:46333909-46333928 | Msa1328480:intron | 15.0% |
| !! | AGATTATAAATGTTACAAAA+AGG | + | chr8_4:46335050-46335069 | None:intergenic | 15.0% |
| !! | CAATGTATGTATAATATAAA+AGG | + | chr8_4:46335261-46335280 | None:intergenic | 15.0% |
| !! | AAAATAAACCAAATAAATGT+TGG | + | chr8_4:46335350-46335369 | None:intergenic | 15.0% |
| !!! | TTAACTTTTATTGAATTGTA+TGG | - | chr8_4:46335412-46335431 | Msa1328480:CDS | 15.0% |
| !! | TTTAAAGATCAAATAGATAA+AGG | - | chr8_4:46336982-46337001 | Msa1328480:CDS | 15.0% |
| !! | TTAAAATCTTGTTGAATAGT+GGG | + | chr8_4:46333907-46333926 | None:intergenic | 20.0% |
| !! | ATTAAAATCTTGTTGAATAG+TGG | + | chr8_4:46333908-46333927 | None:intergenic | 20.0% |
| !!! | TTTAAAATATTTGAGTTGCA+TGG | - | chr8_4:46335229-46335248 | Msa1328480:intron | 20.0% |
| !!! | AAATTTCATTTTTACTCTCA+TGG | - | chr8_4:46335321-46335340 | Msa1328480:intron | 20.0% |
| !! | GTATAAAAAAATACAAACAG+AGG | + | chr8_4:46335524-46335543 | None:intergenic | 20.0% |
| !! | ATATATCAGTGATCTTATAT+TGG | - | chr8_4:46335918-46335937 | Msa1328480:intron | 20.0% |
| !!! | CAGTTTATTTGCTATAAAAT+CGG | + | chr8_4:46336095-46336114 | None:intergenic | 20.0% |
| !!! | AAAGTTTCAATTTTCTAACT+TGG | - | chr8_4:46336311-46336330 | Msa1328480:intron | 20.0% |
| !!! | GAATATGCATTTTATTTGAA+AGG | + | chr8_4:46336700-46336719 | None:intergenic | 20.0% |
| !! | ATTTCATGGAAAAATTAACA+CGG | + | chr8_4:46336785-46336804 | None:intergenic | 20.0% |
| !! | TTAACACAAAAAAAAGCTAT+TGG | + | chr8_4:46336853-46336872 | None:intergenic | 20.0% |
| !! | AAAGGAAAAAAAAAACATAC+CGG | + | chr8_4:46337195-46337214 | None:intergenic | 20.0% |
| !!! | ACAAAAGTATAGAAAGAAAA+AGG | + | chr8_4:46337213-46337232 | None:intergenic | 20.0% |
| ! | TGTTGAATGCATATAAAGTT+AGG | + | chr8_4:46334743-46334762 | None:intergenic | 25.0% |
| ! | AAACAAAGTAGGGAAAAATT+TGG | + | chr8_4:46334793-46334812 | None:intergenic | 25.0% |
| !! | TTAGGAAATTTTACGCATAT+TGG | - | chr8_4:46334906-46334925 | Msa1328480:CDS | 25.0% |
| ! | ACAACTTACAATCATCAATT+TGG | + | chr8_4:46334986-46335005 | None:intergenic | 25.0% |
| !!! | GTTTTAAATTAAAGCATTCG+AGG | - | chr8_4:46335151-46335170 | Msa1328480:intron | 25.0% |
| ! | AAAAAAATACAAACAGAGGA+AGG | + | chr8_4:46335520-46335539 | None:intergenic | 25.0% |
| ! | TATATATGAACACAATAAGC+AGG | - | chr8_4:46335746-46335765 | Msa1328480:intron | 25.0% |
| !! | AAATGCATTTTATAATCCAC+TGG | - | chr8_4:46335949-46335968 | Msa1328480:intron | 25.0% |
| !! | AATGCATTTTATAATCCACT+GGG | - | chr8_4:46335950-46335969 | Msa1328480:intron | 25.0% |
| ! | AGATGTTTGATATGTTGAAA+TGG | - | chr8_4:46335978-46335997 | Msa1328480:intron | 25.0% |
| ! | TTATAGCAAATAAACTGAAC+AGG | - | chr8_4:46336098-46336117 | Msa1328480:intron | 25.0% |
| ! | TACTTCTTCATGAATTACAA+AGG | - | chr8_4:46336215-46336234 | Msa1328480:intron | 25.0% |
| !! | GAAGAATCTTTAACAGTTTT+CGG | + | chr8_4:46336456-46336475 | None:intergenic | 25.0% |
| ! | TTTCGAATAAATCAAGCTTT+GGG | - | chr8_4:46336529-46336548 | Msa1328480:CDS | 25.0% |
| ! | AATAAATTCTGTCTTTCTAG+TGG | - | chr8_4:46336669-46336688 | Msa1328480:CDS | 25.0% |
| !! | TGCATATTCTTTTACAACAA+TGG | - | chr8_4:46336711-46336730 | Msa1328480:CDS | 25.0% |
| ! | AAAAATTAACACGGATAATG+TGG | + | chr8_4:46336776-46336795 | None:intergenic | 25.0% |
| !!! | CATTGAGTAAATGTTTTTTC+AGG | + | chr8_4:46336830-46336849 | None:intergenic | 25.0% |
| ! | TGTTAAACTTCTGTTGAATT+TGG | - | chr8_4:46336867-46336886 | Msa1328480:CDS | 25.0% |
| !! | AGTACTGTTTTCATTTCTAT+TGG | - | chr8_4:46336921-46336940 | Msa1328480:CDS | 25.0% |
| ! | GATAAAGGAATTCCTATAAT+TGG | - | chr8_4:46336997-46337016 | Msa1328480:CDS | 25.0% |
| !!! | TAATAGTTTTGTACAACTCA+GGG | - | chr8_4:46337076-46337095 | Msa1328480:CDS | 25.0% |
| !! | TTCTATACTTTTGTTCTTAG+AGG | - | chr8_4:46337219-46337238 | Msa1328480:five_prime_UTR | 25.0% |
| !! | TCTATACTTTTGTTCTTAGA+GGG | - | chr8_4:46337220-46337239 | Msa1328480:five_prime_UTR | 25.0% |
| !! | TTCTGATTTAGTGTTGTTTC+CGG | - | chr8_4:46334416-46334435 | Msa1328480:intron | 30.0% |
| !! | GTTGATGATAAGTTTACTGT+TGG | - | chr8_4:46334555-46334574 | Msa1328480:CDS | 30.0% |
| ACTGTTGGTATAACTATGTT+TGG | - | chr8_4:46334570-46334589 | Msa1328480:CDS | 30.0% | |
| TATGGAGAATTTGATTAGAG+AGG | - | chr8_4:46334689-46334708 | Msa1328480:CDS | 30.0% | |
| ATGGAGAATTTGATTAGAGA+GGG | - | chr8_4:46334690-46334709 | Msa1328480:CDS | 30.0% | |
| TTTGTTTGACACACTCAAAT+AGG | - | chr8_4:46334806-46334825 | Msa1328480:intron | 30.0% | |
| GAACCAATATGCGTAAAATT+TGG | + | chr8_4:46334873-46334892 | None:intergenic | 30.0% | |
| !! | TAGGAACTAAATTGATAGTG+AGG | - | chr8_4:46334946-46334965 | Msa1328480:CDS | 30.0% |
| !! | AGGAACTAAATTGATAGTGA+GGG | - | chr8_4:46334947-46334966 | Msa1328480:CDS | 30.0% |
| ACTCTATTAAACTGTCAAGT+TGG | + | chr8_4:46335021-46335040 | None:intergenic | 30.0% | |
| AAAGACAAACCAACTTCTTA+TGG | + | chr8_4:46335200-46335219 | None:intergenic | 30.0% | |
| ATGAACTGTAATGATCTTTG+TGG | - | chr8_4:46335446-46335465 | Msa1328480:CDS | 30.0% | |
| TATACATATTCCTGTCTCTT+AGG | - | chr8_4:46335539-46335558 | Msa1328480:CDS | 30.0% | |
| ATACATATTCCTGTCTCTTA+GGG | - | chr8_4:46335540-46335559 | Msa1328480:CDS | 30.0% | |
| TCTCTATTATGACATCAAAG+CGG | + | chr8_4:46335635-46335654 | None:intergenic | 30.0% | |
| CGAAAGTGAAATAGTAATCA+TGG | + | chr8_4:46335840-46335859 | None:intergenic | 30.0% | |
| TTCACTTTCGTTATGCATAT+AGG | - | chr8_4:46335850-46335869 | Msa1328480:intron | 30.0% | |
| TCGTTATGCATATAGGATAT+TGG | - | chr8_4:46335857-46335876 | Msa1328480:intron | 30.0% | |
| ATCACTGATATATCTTGCTT+TGG | + | chr8_4:46335911-46335930 | None:intergenic | 30.0% | |
| ! | TAAATCAGTTGATTCTTTCC+AGG | - | chr8_4:46336027-46336046 | Msa1328480:intron | 30.0% |
| ! | TAAACCTTTTTATGATCCAG+AGG | - | chr8_4:46336183-46336202 | Msa1328480:intron | 30.0% |
| !! | CAATTTTCTAACTTGGTTCT+AGG | - | chr8_4:46336318-46336337 | Msa1328480:intron | 30.0% |
| TTCAAGGTCATTGATATGAT+GGG | + | chr8_4:46336394-46336413 | None:intergenic | 30.0% | |
| ATTCAAGGTCATTGATATGA+TGG | + | chr8_4:46336395-46336414 | None:intergenic | 30.0% | |
| !! | ACTAGTTGATGCATTTTTAG+AGG | - | chr8_4:46336425-46336444 | Msa1328480:CDS | 30.0% |
| GTTTCGAATAAATCAAGCTT+TGG | - | chr8_4:46336528-46336547 | Msa1328480:CDS | 30.0% | |
| !! | ATGCATTTTATTTGAAAGGC+CGG | + | chr8_4:46336696-46336715 | None:intergenic | 30.0% |
| CATGAAATTTAGTTAGTGCT+GGG | - | chr8_4:46336797-46336816 | Msa1328480:CDS | 30.0% | |
| ATGAAATTTAGTTAGTGCTG+GGG | - | chr8_4:46336798-46336817 | Msa1328480:CDS | 30.0% | |
| ATTTCTATTGGCAGAAACTT+TGG | - | chr8_4:46336933-46336952 | Msa1328480:CDS | 30.0% | |
| !!! | CTAATAGTTTTGTACAACTC+AGG | - | chr8_4:46337075-46337094 | Msa1328480:CDS | 30.0% |
| ATGAATGTGAAATCTGGTGA+AGG | + | chr8_4:46334120-46334139 | None:intergenic | 35.0% | |
| ! | GTAAGAAATGTTGAAGTGCT+TGG | + | chr8_4:46334236-46334255 | None:intergenic | 35.0% |
| AAATCAGAAGTTCCAACGTA+AGG | + | chr8_4:46334405-46334424 | None:intergenic | 35.0% | |
| TCTGCTAACACTATTAACAC+CGG | + | chr8_4:46334457-46334476 | None:intergenic | 35.0% | |
| TGTTAATAGTGTTAGCAGAG+TGG | - | chr8_4:46334458-46334477 | Msa1328480:intron | 35.0% | |
| GTAAACTTATCATCAACTCG+CGG | + | chr8_4:46334552-46334571 | None:intergenic | 35.0% | |
| TAGAGATAGGTTGCATAAAG+AGG | - | chr8_4:46334620-46334639 | Msa1328480:CDS | 35.0% | |
| AGAGATAGGTTGCATAAAGA+GGG | - | chr8_4:46334621-46334640 | Msa1328480:CDS | 35.0% | |
| TAAAGAGGGTTATGAGAGTT+TGG | - | chr8_4:46334635-46334654 | Msa1328480:CDS | 35.0% | |
| !!! | AGTTTGGTTTTTCATGCTAC+TGG | - | chr8_4:46334651-46334670 | Msa1328480:CDS | 35.0% |
| !!! | GTTTGGTTTTTCATGCTACT+GGG | - | chr8_4:46334652-46334671 | Msa1328480:CDS | 35.0% |
| !!! | TTTGGTTTTTCATGCTACTG+GGG | - | chr8_4:46334653-46334672 | Msa1328480:CDS | 35.0% |
| TGGAGAATTTGATTAGAGAG+GGG | - | chr8_4:46334691-46334710 | Msa1328480:CDS | 35.0% | |
| !!! | ACAATGTAGTTTTAGTCACC+TGG | - | chr8_4:46334760-46334779 | Msa1328480:intron | 35.0% |
| ! | GAAAAATTTGGTGGTTTACC+AGG | + | chr8_4:46334781-46334800 | None:intergenic | 35.0% |
| CAAAGTAGGGAAAAATTTGG+TGG | + | chr8_4:46334790-46334809 | None:intergenic | 35.0% | |
| TGAGTGTGTCAAACAAAGTA+GGG | + | chr8_4:46334803-46334822 | None:intergenic | 35.0% | |
| TTGAGTGTGTCAAACAAAGT+AGG | + | chr8_4:46334804-46334823 | None:intergenic | 35.0% | |
| ! | CTGCCAAATTTTACGCATAT+TGG | - | chr8_4:46334867-46334886 | Msa1328480:CDS | 35.0% |
| ! | TGATAGTGAGGGTTAAACAT+AGG | - | chr8_4:46334958-46334977 | Msa1328480:CDS | 35.0% |
| GATAGTGAGGGTTAAACATA+GGG | - | chr8_4:46334959-46334978 | Msa1328480:CDS | 35.0% | |
| GGAAGATTACCATAAGAAGT+TGG | - | chr8_4:46335188-46335207 | Msa1328480:intron | 35.0% | |
| CATGGTTGCCAACATTTATT+TGG | - | chr8_4:46335339-46335358 | Msa1328480:intron | 35.0% | |
| TTAGATGCGTGTGTTTACAT+TGG | - | chr8_4:46335368-46335387 | Msa1328480:CDS | 35.0% | |
| !! | TGTGTTTACATTGGCTGTTT+TGG | - | chr8_4:46335377-46335396 | Msa1328480:CDS | 35.0% |
| CATTACAGTTCATCTTGTTG+TGG | + | chr8_4:46335439-46335458 | None:intergenic | 35.0% | |
| GCATAAAGAAGAATCTGAAG+CGG | + | chr8_4:46335494-46335513 | None:intergenic | 35.0% | |
| CTCTATTATGACATCAAAGC+GGG | + | chr8_4:46335634-46335653 | None:intergenic | 35.0% | |
| AATAGAGAAGAAAATCCCCT+TGG | - | chr8_4:46335647-46335666 | Msa1328480:intron | 35.0% | |
| TTTCTTTGCTGAAAACTCTC+TGG | + | chr8_4:46335726-46335745 | None:intergenic | 35.0% | |
| TCAAACATCTTTAATCCCAG+TGG | + | chr8_4:46335968-46335987 | None:intergenic | 35.0% | |
| ! | AAAGCAGATATACCCTTTTC+TGG | + | chr8_4:46336151-46336170 | None:intergenic | 35.0% |
| GGATCATAAAAAGGTTTACC+TGG | + | chr8_4:46336181-46336200 | None:intergenic | 35.0% | |
| !! | GTTCTAGGAAGAACTTCTTA+AGG | - | chr8_4:46336333-46336352 | Msa1328480:intron | 35.0% |
| ! | TCTAAAGTTGTGTATTGTGC+AGG | - | chr8_4:46336356-46336375 | Msa1328480:intron | 35.0% |
| TCAAGGTCATTGATATGATG+GGG | + | chr8_4:46336393-46336412 | None:intergenic | 35.0% | |
| CTAGTGCATTTGCAAATTCA+AGG | + | chr8_4:46336410-46336429 | None:intergenic | 35.0% | |
| TATTCGAAACAGAACCTTCA+TGG | + | chr8_4:46336518-46336537 | None:intergenic | 35.0% | |
| TTCACTAGGTGTGTAAACAA+TGG | + | chr8_4:46336556-46336575 | None:intergenic | 35.0% | |
| ATCTACATGAAATGAGAACC+TGG | + | chr8_4:46336594-46336613 | None:intergenic | 35.0% | |
| !! | TGCATTTTATTTGAAAGGCC+GGG | + | chr8_4:46336695-46336714 | None:intergenic | 35.0% |
| CCAGCACTAACTAAATTTCA+TGG | + | chr8_4:46336799-46336818 | None:intergenic | 35.0% | |
| CCATGAAATTTAGTTAGTGC+TGG | - | chr8_4:46336796-46336815 | Msa1328480:CDS | 35.0% | |
| CTTGAACAGAATTTAGCAGT+TGG | + | chr8_4:46337255-46337274 | None:intergenic | 35.0% | |
| ! | GTTCAAGTATTGTTCACTTC+AGG | - | chr8_4:46337268-46337287 | Msa1328480:five_prime_UTR | 35.0% |
| TTCGTTGAGCTTAGTGTCTA+AGG | + | chr8_4:46333983-46334002 | None:intergenic | 40.0% | |
| !!! | ATCTGGTGAAGGTTTTGGTT+GGG | + | chr8_4:46334109-46334128 | None:intergenic | 40.0% |
| !! | AATCTGGTGAAGGTTTTGGT+TGG | + | chr8_4:46334110-46334129 | None:intergenic | 40.0% |
| ! | GTGAAATCTGGTGAAGGTTT+TGG | + | chr8_4:46334114-46334133 | None:intergenic | 40.0% |
| CTGGAGATGAATGTGAAATC+TGG | + | chr8_4:46334126-46334145 | None:intergenic | 40.0% | |
| GTATGAGAGAACTTCGTTTC+TGG | + | chr8_4:46334145-46334164 | None:intergenic | 40.0% | |
| ! | TTGAAGTGCTTGGCTCATTA+CGG | + | chr8_4:46334226-46334245 | None:intergenic | 40.0% |
| ACGGTTGAAACAATGAGCTT+CGG | + | chr8_4:46334363-46334382 | None:intergenic | 40.0% | |
| ATTGTTTCAACCGTAGCTAG+TGG | - | chr8_4:46334369-46334388 | Msa1328480:intron | 40.0% | |
| TTGGAAGGATTCGGAGTTTA+GGG | - | chr8_4:46334520-46334539 | Msa1328480:intron | 40.0% | |
| TCTCTAACAGCATCAACACA+AGG | + | chr8_4:46334606-46334625 | None:intergenic | 40.0% | |
| ! | GTGTTGATGCTGTTAGAGAT+AGG | - | chr8_4:46334607-46334626 | Msa1328480:CDS | 40.0% |
| GATTAGAGAGGGGTTTATAC+AGG | - | chr8_4:46334701-46334720 | Msa1328480:CDS | 40.0% | |
| ACACACTCAAATAGGTCTCT+AGG | - | chr8_4:46334814-46334833 | Msa1328480:intron | 40.0% | |
| ! | GGTTCATCTGAGATTGTGTT+AGG | - | chr8_4:46334888-46334907 | Msa1328480:CDS | 40.0% |
| ! | GGTTCATCTGAGAGTATGTT+AGG | - | chr8_4:46334927-46334946 | Msa1328480:CDS | 40.0% |
| ! | TTCATAGAGCGCTCTCAAAT+AGG | + | chr8_4:46335077-46335096 | None:intergenic | 40.0% |
| !! | TATGAAGTCAGGGACTAGTT+TGG | - | chr8_4:46335091-46335110 | Msa1328480:intron | 40.0% |
| AAGCATTCGAGGTTTGTATC+TGG | - | chr8_4:46335162-46335181 | Msa1328480:intron | 40.0% | |
| TTCGAGGTTTGTATCTGGTT+TGG | - | chr8_4:46335167-46335186 | Msa1328480:intron | 40.0% | |
| TTTGGACATCACAACAACAG+AGG | - | chr8_4:46335566-46335585 | Msa1328480:intron | 40.0% | |
| ! | CTACATAGTTGGAGGTGTAA+TGG | - | chr8_4:46335596-46335615 | Msa1328480:intron | 40.0% |
| GCATTAGACATGGTGAACTT+TGG | - | chr8_4:46335684-46335703 | Msa1328480:intron | 40.0% | |
| TTGCTGAAAACTCTCTGGTA+TGG | + | chr8_4:46335721-46335740 | None:intergenic | 40.0% | |
| AACACAATAAGCAGGTGACT+AGG | - | chr8_4:46335754-46335773 | Msa1328480:intron | 40.0% | |
| GACGACTACTCTATATGACT+AGG | - | chr8_4:46335778-46335797 | Msa1328480:intron | 40.0% | |
| ! | CAGATATACCCTTTTCTGGA+AGG | + | chr8_4:46336147-46336166 | None:intergenic | 40.0% |
| ! | ATATCTGCTTTAGATGCTCC+AGG | - | chr8_4:46336160-46336179 | Msa1328480:intron | 40.0% |
| GTTGCCTCTGGATCATAAAA+AGG | + | chr8_4:46336190-46336209 | None:intergenic | 40.0% | |
| ! | TTTTATGATCCAGAGGCAAC+TGG | - | chr8_4:46336190-46336209 | Msa1328480:intron | 40.0% |
| TCAGACTGATGATATTCGAC+AGG | - | chr8_4:46336243-46336262 | Msa1328480:intron | 40.0% | |
| ATGTTGGACAGTTTCAGGAA+TGG | + | chr8_4:46336493-46336512 | None:intergenic | 40.0% | |
| TTTGCATCTGGGAATTCACT+AGG | + | chr8_4:46336570-46336589 | None:intergenic | 40.0% | |
| GGAATTCCTATAATTGGAGC+TGG | - | chr8_4:46337003-46337022 | Msa1328480:CDS | 40.0% | |
| TTCAAACTTGGCAGATATCC+CGG | + | chr8_4:46337037-46337056 | None:intergenic | 40.0% | |
| ACAGCATTAGCATCAGCAAA+TGG | + | chr8_4:46337144-46337163 | None:intergenic | 40.0% | |
| TAATGCTGTTGTGCTTGACA+TGG | - | chr8_4:46337155-46337174 | Msa1328480:CDS | 40.0% | |
| ACATACCGGCAAAACTTCAT+TGG | + | chr8_4:46337181-46337200 | None:intergenic | 40.0% | |
| ! | CAAGTATTGTTCACTTCAGG+TGG | - | chr8_4:46337271-46337290 | Msa1328480:five_prime_UTR | 40.0% |
| !! | ATCTTGTTGAATAGTGGGCG+AGG | + | chr8_4:46333902-46333921 | None:intergenic | 45.0% |
| AGAAAACACGAAGAGTGGTG+GGG | + | chr8_4:46333951-46333970 | None:intergenic | 45.0% | |
| CAGAAAACACGAAGAGTGGT+GGG | + | chr8_4:46333952-46333971 | None:intergenic | 45.0% | |
| ! | ACTCTTCGTGTTTTCTGCGT+CGG | - | chr8_4:46333955-46333974 | Msa1328480:CDS | 45.0% |
| GGAGTGAATCGGAGATGAAA+CGG | + | chr8_4:46334008-46334027 | None:intergenic | 45.0% | |
| TGCTTGGCTCATTACGGAAA+CGG | + | chr8_4:46334220-46334239 | None:intergenic | 45.0% | |
| ATCGTTCACTTCTCTTCCAC+TGG | - | chr8_4:46334332-46334351 | Msa1328480:intron | 45.0% | |
| TCGTTCACTTCTCTTCCACT+GGG | - | chr8_4:46334333-46334352 | Msa1328480:intron | 45.0% | |
| CGGTTGAAACAATGAGCTTC+GGG | + | chr8_4:46334362-46334381 | None:intergenic | 45.0% | |
| TTCCAACGTAAGGTTCCGTT+TGG | + | chr8_4:46334395-46334414 | None:intergenic | 45.0% | |
| GGATGGTAGTTGGAAGGATT+CGG | - | chr8_4:46334511-46334530 | Msa1328480:intron | 45.0% | |
| GTTGGAAGGATTCGGAGTTT+AGG | - | chr8_4:46334519-46334538 | Msa1328480:intron | 45.0% | |
| TGGAAGGATTCGGAGTTTAG+GGG | - | chr8_4:46334521-46334540 | Msa1328480:intron | 45.0% | |
| ! | GTTTTTCATGCTACTGGGGT+TGG | - | chr8_4:46334657-46334676 | Msa1328480:CDS | 45.0% |
| !! | TCCTGTCTCTTAGGGTGTTT+TGG | - | chr8_4:46335548-46335567 | Msa1328480:CDS | 45.0% |
| TCCAAAACACCCTAAGAGAC+AGG | + | chr8_4:46335552-46335571 | None:intergenic | 45.0% | |
| GAGGTAGCAGACTACATAGT+TGG | - | chr8_4:46335585-46335604 | Msa1328480:intron | 45.0% | |
| GTAGCAGACTACATAGTTGG+AGG | - | chr8_4:46335588-46335607 | Msa1328480:intron | 45.0% | |
| TGTCTAATGCTCCCACACTA+AGG | + | chr8_4:46335674-46335693 | None:intergenic | 45.0% | |
| !! | TAGTGTGGGAGCATTAGACA+TGG | - | chr8_4:46335674-46335693 | Msa1328480:intron | 45.0% |
| GGTCAAAGTCGTAGGATAGT+GGG | + | chr8_4:46335890-46335909 | None:intergenic | 45.0% | |
| TGGTCAAAGTCGTAGGATAG+TGG | + | chr8_4:46335891-46335910 | None:intergenic | 45.0% | |
| CTTGCTTTGGTCAAAGTCGT+AGG | + | chr8_4:46335898-46335917 | None:intergenic | 45.0% | |
| TCGTGTTTGCCTTCCAGAAA+AGG | - | chr8_4:46336135-46336154 | Msa1328480:intron | 45.0% | |
| CGTGTTTGCCTTCCAGAAAA+GGG | - | chr8_4:46336136-46336155 | Msa1328480:intron | 45.0% | |
| GTTGTGTATTGTGCAGGTGA+AGG | - | chr8_4:46336362-46336381 | Msa1328480:intron | 45.0% | |
| TGGACATGTTGGACAGTTTC+AGG | + | chr8_4:46336498-46336517 | None:intergenic | 45.0% | |
| ACTGTCCAACATGTCCATGA+AGG | - | chr8_4:46336501-46336520 | Msa1328480:CDS | 45.0% | |
| CAGAACCTTCATGGACATGT+TGG | + | chr8_4:46336509-46336528 | None:intergenic | 45.0% | |
| GAATTCCCAGATGCAAAACC+AGG | - | chr8_4:46336573-46336592 | Msa1328480:CDS | 45.0% | |
| !!! | GAGAACCTGGTTTTGCATCT+GGG | + | chr8_4:46336581-46336600 | None:intergenic | 45.0% |
| !!! | TGAGAACCTGGTTTTGCATC+TGG | + | chr8_4:46336582-46336601 | None:intergenic | 45.0% |
| ! | ATTCTGTCTTTCTAGTGGCC+CGG | - | chr8_4:46336674-46336693 | Msa1328480:CDS | 45.0% |
| CTATAATTGGAGCTGGTGCT+GGG | - | chr8_4:46337010-46337029 | Msa1328480:CDS | 45.0% | |
| TCTGCCAAGTTTGAAGAAGC+TGG | - | chr8_4:46337042-46337061 | Msa1328480:CDS | 45.0% | |
| TCCTCCAGCTTCTTCAAACT+TGG | + | chr8_4:46337049-46337068 | None:intergenic | 45.0% | |
| ! | CATGGCCAATGAAGTTTTGC+CGG | - | chr8_4:46337173-46337192 | Msa1328480:CDS | 45.0% |
| !! | TTGTTGAATAGTGGGCGAGG+AGG | + | chr8_4:46333899-46333918 | None:intergenic | 50.0% |
| GAAAACACGAAGAGTGGTGG+GGG | + | chr8_4:46333950-46333969 | None:intergenic | 50.0% | |
| GCAGAAAACACGAAGAGTGG+TGG | + | chr8_4:46333953-46333972 | None:intergenic | 50.0% | |
| GACGCAGAAAACACGAAGAG+TGG | + | chr8_4:46333956-46333975 | None:intergenic | 50.0% | |
| GAGATTGGAGCGGAGTGAAT+CGG | + | chr8_4:46334019-46334038 | None:intergenic | 50.0% | |
| ! | GAGTTTGGGGGAAGTGTGAT+CGG | + | chr8_4:46334052-46334071 | None:intergenic | 50.0% |
| ACGACGACGATGTCGAGTTT+GGG | + | chr8_4:46334066-46334085 | None:intergenic | 50.0% | |
| !!! | AGGTTTTGGTTGGGTTGGAG+CGG | + | chr8_4:46334100-46334119 | None:intergenic | 50.0% |
| !!! | GGTGAAGGTTTTGGTTGGGT+TGG | + | chr8_4:46334105-46334124 | None:intergenic | 50.0% |
| TTGCCTCTGTCTTGTGGAAG+AGG | + | chr8_4:46334195-46334214 | None:intergenic | 50.0% | |
| !! | AATTCCGATCAGAGCATCGC+CGG | - | chr8_4:46334264-46334283 | Msa1328480:intron | 50.0% |
| CGTTCACTTCTCTTCCACTG+GGG | - | chr8_4:46334334-46334353 | Msa1328480:intron | 50.0% | |
| AACCGTAGCTAGTGGCCAAA+CGG | - | chr8_4:46334377-46334396 | Msa1328480:intron | 50.0% | |
| TTCCGTTTGGCCACTAGCTA+CGG | + | chr8_4:46334382-46334401 | None:intergenic | 50.0% | |
| TTTCATGCTACTGGGGTTGG+TGG | - | chr8_4:46334660-46334679 | Msa1328480:CDS | 50.0% | |
| !! | TGAGAGCGCTCTATGAAGTC+AGG | - | chr8_4:46335080-46335099 | Msa1328480:intron | 50.0% |
| !! | GAGAGCGCTCTATGAAGTCA+GGG | - | chr8_4:46335081-46335100 | Msa1328480:intron | 50.0% |
| AATCCCCTTGGTCCTTAGTG+TGG | - | chr8_4:46335659-46335678 | Msa1328480:intron | 50.0% | |
| ATCCCCTTGGTCCTTAGTGT+GGG | - | chr8_4:46335660-46335679 | Msa1328480:intron | 50.0% | |
| TTGTTCGCATGAGCGAAACC+TGG | + | chr8_4:46336048-46336067 | None:intergenic | 50.0% | |
| TTCGCTCATGCGAACAACAG+TGG | - | chr8_4:46336051-46336070 | Msa1328480:intron | 50.0% | |
| ! | AGAAGTACACCAGTTGCCTC+TGG | + | chr8_4:46336202-46336221 | None:intergenic | 50.0% |
| ACAGTTTCAGGAATGGCTGC+TGG | + | chr8_4:46336486-46336505 | None:intergenic | 50.0% | |
| CCAGCACCAGCTCCAATTAT+AGG | + | chr8_4:46337012-46337031 | None:intergenic | 50.0% | |
| CCTATAATTGGAGCTGGTGC+TGG | - | chr8_4:46337009-46337028 | Msa1328480:CDS | 50.0% | |
| GCCAAGTTTGAAGAAGCTGG+AGG | - | chr8_4:46337045-46337064 | Msa1328480:CDS | 50.0% | |
| CTGGGAGAGGTTCATTAGCA+GGG | - | chr8_4:46337112-46337131 | Msa1328480:CDS | 50.0% | |
| AGAAGCGGTGGAGATTGGAG+CGG | + | chr8_4:46334029-46334048 | None:intergenic | 55.0% | |
| ATCGGAGAAGCGGTGGAGAT+TGG | + | chr8_4:46334034-46334053 | None:intergenic | 55.0% | |
| AAGTGTGATCGGAGAAGCGG+TGG | + | chr8_4:46334041-46334060 | None:intergenic | 55.0% | |
| ! | GGGAAGTGTGATCGGAGAAG+CGG | + | chr8_4:46334044-46334063 | None:intergenic | 55.0% |
| GACGACGATGTCGAGTTTGG+GGG | + | chr8_4:46334064-46334083 | None:intergenic | 55.0% | |
| CGACGACGATGTCGAGTTTG+GGG | + | chr8_4:46334065-46334084 | None:intergenic | 55.0% | |
| GACGACGACGATGTCGAGTT+TGG | + | chr8_4:46334067-46334086 | None:intergenic | 55.0% | |
| !!! | TTTTGGTTGGGTTGGAGCGG+TGG | + | chr8_4:46334097-46334116 | None:intergenic | 55.0% |
| TCTGTCTTGTGGAAGAGGCG+TGG | + | chr8_4:46334190-46334209 | None:intergenic | 55.0% | |
| ACGCCTCTTCCACAAGACAG+AGG | - | chr8_4:46334189-46334208 | Msa1328480:intron | 55.0% | |
| ACGGCTTTGCCTCTGTCTTG+TGG | + | chr8_4:46334201-46334220 | None:intergenic | 55.0% | |
| GGCGATGCTCTGATCGGAAT+TGG | + | chr8_4:46334265-46334284 | None:intergenic | 55.0% | |
| AACTCCGGCGATGCTCTGAT+CGG | + | chr8_4:46334271-46334290 | None:intergenic | 55.0% | |
| !! | CAGAGCATCGCCGGAGTTAT+CGG | - | chr8_4:46334273-46334292 | Msa1328480:intron | 55.0% |
| GGCCAAACGGAACCTTACGT+TGG | - | chr8_4:46334390-46334409 | Msa1328480:intron | 55.0% | |
| CCGGCAACATCAACAATCGC+CGG | + | chr8_4:46334438-46334457 | None:intergenic | 55.0% | |
| CCGGCGATTGTTGATGTTGC+CGG | - | chr8_4:46334435-46334454 | Msa1328480:intron | 55.0% | |
| !! | CAATGCTGCTGCTGCTTTCG+CGG | - | chr8_4:46334488-46334507 | Msa1328480:intron | 55.0% |
| !! | AATGCTGCTGCTGCTTTCGC+GGG | - | chr8_4:46334489-46334508 | Msa1328480:intron | 55.0% |
| !! | ATGCTACTGGGGTTGGTGGT+AGG | - | chr8_4:46334664-46334683 | Msa1328480:CDS | 55.0% |
| !! | TGCTACTGGGGTTGGTGGTA+GGG | - | chr8_4:46334665-46334684 | Msa1328480:CDS | 55.0% |
| CTCCCACACTAAGGACCAAG+GGG | + | chr8_4:46335665-46335684 | None:intergenic | 55.0% | |
| GCTCCCACACTAAGGACCAA+GGG | + | chr8_4:46335666-46335685 | None:intergenic | 55.0% | |
| TGCTCCCACACTAAGGACCA+AGG | + | chr8_4:46335667-46335686 | None:intergenic | 55.0% | |
| GTTTCAGGAATGGCTGCTGG+TGG | + | chr8_4:46336483-46336502 | None:intergenic | 55.0% | |
| ! | TGTACAACTCAGGGCGCTTC+CGG | - | chr8_4:46337085-46337104 | Msa1328480:CDS | 55.0% |
| ATGAACCTCTCCCAGCCATC+CGG | + | chr8_4:46337107-46337126 | None:intergenic | 55.0% | |
| GCTGGGAGAGGTTCATTAGC+AGG | - | chr8_4:46337111-46337130 | Msa1328480:CDS | 55.0% | |
| ! | AACACGAAGAGTGGTGGGGG+TGG | + | chr8_4:46333947-46333966 | None:intergenic | 60.0% |
| ! | AAGAGGCGTGGTGGCTGTGT+CGG | + | chr8_4:46334178-46334197 | None:intergenic | 60.0% |
| ! | GTCTTGTGGAAGAGGCGTGG+TGG | + | chr8_4:46334187-46334206 | None:intergenic | 60.0% |
| ATCGCCGGAGTTATCGGCGT+TGG | - | chr8_4:46334279-46334298 | Msa1328480:intron | 60.0% | |
| ACCGCCAACGCCGATAACTC+CGG | + | chr8_4:46334286-46334305 | None:intergenic | 60.0% | |
| !! | GTTATCGGCGTTGGCGGTAG+CGG | - | chr8_4:46334288-46334307 | Msa1328480:intron | 60.0% |
| ATGAGCTTCGGGATCCCCAG+TGG | + | chr8_4:46334351-46334370 | None:intergenic | 60.0% | |
| !! | ATGCTGCTGCTGCTTTCGCG+GGG | - | chr8_4:46334490-46334509 | Msa1328480:intron | 60.0% |
| GCTTTCGCGGGGATGGTAGT+TGG | - | chr8_4:46334501-46334520 | Msa1328480:intron | 60.0% | |
| TCGCGGGGATGGTAGTTGGA+AGG | - | chr8_4:46334505-46334524 | Msa1328480:intron | 60.0% | |
| !! | TGGGGTTGGTGGTAGGGCTA+TGG | - | chr8_4:46334671-46334690 | Msa1328480:CDS | 60.0% |
| ! | ATTGGAGCTGGTGCTGGGAC+CGG | - | chr8_4:46337015-46337034 | Msa1328480:CDS | 60.0% |
| ! | GCCGGAGTTATCGGCGTTGG+CGG | - | chr8_4:46334282-46334301 | Msa1328480:intron | 65.0% |
| !! | TGCTGCTGCTTTCGCGGGGA+TGG | - | chr8_4:46334494-46334513 | Msa1328480:intron | 65.0% |
| ! | TTGGAGCTGGTGCTGGGACC+GGG | - | chr8_4:46337016-46337035 | Msa1328480:CDS | 65.0% |
| ! | CAACTCAGGGCGCTTCCGGA+TGG | - | chr8_4:46337089-46337108 | Msa1328480:CDS | 65.0% |
| ! | TGGCTGTGTCGGCGGTGTCG+TGG | + | chr8_4:46334167-46334186 | None:intergenic | 70.0% |
| AGGCGTGGTGGCTGTGTCGG+CGG | + | chr8_4:46334175-46334194 | None:intergenic | 70.0% | |
| !! | ATCGGCGTTGGCGGTAGCGG+AGG | - | chr8_4:46334291-46334310 | Msa1328480:intron | 70.0% |
| ! | TCAGGGCGCTTCCGGATGGC+TGG | - | chr8_4:46337093-46337112 | Msa1328480:CDS | 70.0% |
| ! | CAGGGCGCTTCCGGATGGCT+GGG | - | chr8_4:46337094-46337113 | Msa1328480:CDS | 70.0% |
| CGCTTCCGGATGGCTGGGAG+AGG | - | chr8_4:46337099-46337118 | Msa1328480:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 46333814 | 46337316 | 46333814 | ID=Msa1328480;Name=Msa1328480 |
| chr8_4 | mRNA | 46333814 | 46337316 | 46333814 | ID=Msa1328480-mRNA-1;Parent=Msa1328480;Name=Msa1328480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=114|0.8|0.66|0.83|1|1|6|0|569 |
| chr8_4 | exon | 46333814 | 46333840 | 46333814 | ID=Msa1328480-mRNA-1:exon:13121;Parent=Msa1328480-mRNA-1 |
| chr8_4 | exon | 46333936 | 46334183 | 46333936 | ID=Msa1328480-mRNA-1:exon:13120;Parent=Msa1328480-mRNA-1 |
| chr8_4 | exon | 46334536 | 46334752 | 46334536 | ID=Msa1328480-mRNA-1:exon:13119;Parent=Msa1328480-mRNA-1 |
| chr8_4 | exon | 46334866 | 46335081 | 46334866 | ID=Msa1328480-mRNA-1:exon:13118;Parent=Msa1328480-mRNA-1 |
| chr8_4 | exon | 46335363 | 46335569 | 46335363 | ID=Msa1328480-mRNA-1:exon:13117;Parent=Msa1328480-mRNA-1 |
| chr8_4 | exon | 46336408 | 46337316 | 46336408 | ID=Msa1328480-mRNA-1:exon:13116;Parent=Msa1328480-mRNA-1 |
| chr8_4 | five_prime_UTR | 46337203 | 46337316 | 46337203 | ID=Msa1328480-mRNA-1:five_prime_utr;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46336408 | 46337202 | 46336408 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46335363 | 46335569 | 46335363 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46334866 | 46335081 | 46334866 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46334536 | 46334752 | 46334536 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46333936 | 46334183 | 46333936 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| chr8_4 | CDS | 46333814 | 46333840 | 46333814 | ID=Msa1328480-mRNA-1:cds;Parent=Msa1328480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
