AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203940 MtrunA17_Chr4g0053001 96.979 331 9 1 1 330 1 331 0.0 665
Msa1203940 MtrunA17_Chr6g0483441 49.080 326 126 8 12 329 1 294 7.22e-94 281
Msa1203940 MtrunA17_Chr8g0392551 50.629 318 135 5 12 329 1 296 2.03e-90 272
Msa1203940 MtrunA17_Chr2g0331671 42.006 319 169 11 14 329 4 309 2.36e-69 218
Msa1203940 MtrunA17_Chr4g0038691 43.769 329 162 10 10 329 4 318 2.88e-68 216
Msa1203940 MtrunA17_Chr6g0486001 40.308 325 170 9 12 330 1 307 7.02e-58 189
Msa1203940 MtrunA17_Chr3g0091821 57.325 157 61 3 171 326 39 190 2.96e-49 163
Msa1203940 MtrunA17_Chr3g0090061 26.471 306 187 11 39 311 29 329 4.42e-19 86.7
Msa1203940 MtrunA17_Chr8g0379281 45.055 91 41 1 146 236 105 186 1.60e-17 79.7
Msa1203940 MtrunA17_Chr8g0379271 34.375 96 59 2 236 329 1 94 3.95e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203940 AT1G45688.1 51.744 344 130 8 12 326 1 337 1.41e-97 292
Msa1203940 AT5G42860.1 49.107 336 129 7 12 326 1 315 2.01e-93 281
Msa1203940 AT1G45688.2 49.801 251 95 7 12 244 1 238 9.67e-73 225
Msa1203940 AT2G41990.1 39.117 317 169 7 12 326 1 295 4.44e-51 171
Msa1203940 AT4G35170.1 36.364 308 174 7 25 327 7 297 9.49e-51 171
Msa1203940 AT3G24600.1 32.812 320 187 7 12 325 2 299 5.93e-37 135
Msa1203940 AT3G24605.1 30.263 304 187 8 10 311 1 281 3.30e-35 130
Msa1203940 AT3G08490.1 23.585 212 155 4 121 326 57 267 2.64e-17 80.9

Find 97 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGTGGGCTTGAGTTAA+AGG 0.197154 8_1:+59349755 None:intergenic
AGAGTTATTGTTAGTGTAAT+TGG 0.210630 8_1:+59349989 None:intergenic
CAAAATCTAAATTACACTTT+TGG 0.222927 8_1:+59348126 None:intergenic
GATTATGGATCCGAAGAAAA+TGG 0.228318 8_1:-59348395 Msa1203940:CDS
ACCATTGACATTGAATATTA+TGG 0.231681 8_1:-59348488 Msa1203940:CDS
TAATTTATGTAGTAATTTAA+AGG 0.232581 8_1:-59348271 Msa1203940:three_prime_UTR
GCCAATTACCTTTCCTGTTA+TGG 0.240601 8_1:+59349622 None:intergenic
AGGTCAAAAGCTTATGTATT+AGG 0.241379 8_1:-59348463 Msa1203940:CDS
GTTCTATTTCAACTTCAAAT+AGG 0.289456 8_1:-59348097 Msa1203940:three_prime_UTR
CCAATTACCTTTCCTGTTAT+GGG 0.301565 8_1:+59349623 None:intergenic
AATTTATGTAGTAATTTAAA+GGG 0.302845 8_1:-59348270 Msa1203940:three_prime_UTR
TCTATTAAAGTGATGGTAAA+AGG 0.303644 8_1:-59348580 Msa1203940:CDS
GGAAGTCATATTCCACTATA+TGG 0.304021 8_1:-59348559 Msa1203940:CDS
AATTGAGTGTGCATTGATTA+TGG 0.311781 8_1:-59348410 Msa1203940:CDS
CCCATAACAGGAAAGGTAAT+TGG 0.338006 8_1:-59349623 Msa1203940:CDS
GGTCAAAAGCTTATGTATTA+GGG 0.353077 8_1:-59348462 Msa1203940:CDS
GCAGTCAAGCTTCCCATAAC+AGG 0.360744 8_1:-59349635 Msa1203940:CDS
ATCTGCATAGCGTAAGTGTT+GGG 0.373743 8_1:+59350053 None:intergenic
TATTGTTACATGAAATTTGA+AGG 0.377989 8_1:-59348156 Msa1203940:three_prime_UTR
TGGTAATAATTGAGATCTAA+TGG 0.385611 8_1:+59348744 None:intergenic
TAACTCATACGCACACTTGT+TGG 0.394625 8_1:+59348354 None:intergenic
GGCTAACATTGTAATGTTGT+TGG 0.400142 8_1:+59349908 None:intergenic
TTGTTGATGAAGTTTGAGTT+TGG 0.400789 8_1:+59349949 None:intergenic
TACCAACTTACACTAGCAAC+TGG 0.405417 8_1:-59348726 Msa1203940:CDS
GTCAATGGTACCGGTTCAAC+CGG 0.412848 8_1:+59348502 None:intergenic
AAGAAGTCCTTCTTCTTCAA+TGG 0.413272 8_1:+59349575 None:intergenic
AGTAATAAATGAGAAACTAT+AGG 0.422988 8_1:-59348298 Msa1203940:three_prime_UTR
CACTTGTTGGTAAGTCGAAT+AGG 0.431111 8_1:+59348367 None:intergenic
TCTCATTCCAACTCATCGTT+GGG 0.432926 8_1:-59349708 Msa1203940:CDS
AGCTTATGTATTAGGGGCAT+TGG 0.433647 8_1:-59348455 Msa1203940:CDS
GGAAAGGTAATTGGCGTCCT+TGG 0.434224 8_1:-59349614 Msa1203940:CDS
CAATGGTTCACCGGTTGAAC+CGG 0.434589 8_1:-59348512 Msa1203940:CDS
TTTCTTGATTGATAAAACTT+AGG 0.441416 8_1:+59348613 None:intergenic
GCAGGAAAATAGCATCTCCT+AGG 0.445069 8_1:+59349522 None:intergenic
CAAGCGGGTGCGGATTTGTC+AGG 0.445363 8_1:-59348858 Msa1203940:CDS
TTCTCATTCCAACTCATCGT+TGG 0.452096 8_1:-59349709 Msa1203940:CDS
TTTAATGCCATTGAAGAAGA+AGG 0.460904 8_1:-59349582 Msa1203940:CDS
TTGTCGGTGAGGATTGTGTT+AGG 0.463501 8_1:+59349862 None:intergenic
TCATTTATTACTTCCACGTA+TGG 0.474436 8_1:+59348309 None:intergenic
GCTTACCTCGGAGTCTGTCT+TGG 0.474995 8_1:+59349887 None:intergenic
AGCCCACTTCAAAGCCCGTT+GGG 0.480036 8_1:-59349744 Msa1203940:CDS
AAGAAACAAACAAGAAAAGC+AGG 0.481474 8_1:+59349504 None:intergenic
ATTATGGATCCGAAGAAAAT+GGG 0.484777 8_1:-59348394 Msa1203940:CDS
GCAAGATTGAACACTGTCAA+TGG 0.507281 8_1:-59348529 Msa1203940:CDS
CGTTGGAAGAGTCGCGTGAT+GGG 0.507373 8_1:+59349799 None:intergenic
AATGAGGAGGAGATCCCAAC+GGG 0.512593 8_1:+59349730 None:intergenic
TTCCAGTTGCTAGTGTAAGT+TGG 0.513143 8_1:+59348724 None:intergenic
ACCATAATATTCAATGTCAA+TGG 0.513438 8_1:+59348487 None:intergenic
GAGGAAGATTCACGTGAATG+TGG 0.516881 8_1:+59349684 None:intergenic
ATTTATCATTCAAGCGGGTG+CGG 0.517433 8_1:-59348868 Msa1203940:CDS
CGTAAGTGTTGGGGCATGCA+AGG 0.518852 8_1:+59350063 None:intergenic
AGGTAATTGGCGTCCTTGGA+AGG 0.521480 8_1:-59349610 Msa1203940:CDS
TCGTTGGAAGAGTCGCGTGA+TGG 0.526058 8_1:+59349798 None:intergenic
ATATTCAATGTCAATGGTAC+CGG 0.541625 8_1:+59348493 None:intergenic
TAACATTGTAATGTTGTTGG+TGG 0.542071 8_1:+59349911 None:intergenic
GAACACTGTCAATGGTTCAC+CGG 0.544355 8_1:-59348521 Msa1203940:CDS
TCAAAGATCTATTAAAGTGA+TGG 0.547641 8_1:-59348587 Msa1203940:CDS
ATGCAGATCGTGGATTCCCT+AGG 0.552676 8_1:-59349539 Msa1203940:CDS
GTCAGGAGTTGCCACTAGCA+TGG 0.553632 8_1:-59348841 Msa1203940:CDS
ATCCCAACGGGCTTTGAAGT+GGG 0.555397 8_1:+59349742 None:intergenic
GATCCCAACGGGCTTTGAAG+TGG 0.558461 8_1:+59349741 None:intergenic
AGCCCATCACGTGATCTTGT+CGG 0.561235 8_1:+59349846 None:intergenic
GTCATATTCCACTATATGGA+GGG 0.565203 8_1:-59348555 Msa1203940:CDS
TTGTGTTAGGCTGCTTACCT+CGG 0.565391 8_1:+59349875 None:intergenic
AAGCCCACTTCAAAGCCCGT+TGG 0.565440 8_1:-59349745 Msa1203940:CDS
GATAGATTTATCATTCAAGC+GGG 0.565737 8_1:-59348873 Msa1203940:CDS
GATGAGTTGGAATGAGAATG+AGG 0.578944 8_1:+59349714 None:intergenic
AATCTGCATAGCGTAAGTGT+TGG 0.579164 8_1:+59350052 None:intergenic
CAGGAAAATAGCATCTCCTA+GGG 0.584033 8_1:+59349523 None:intergenic
ATTTATGTAGTAATTTAAAG+GGG 0.587629 8_1:-59348269 Msa1203940:three_prime_UTR
TGATAGATTTATCATTCAAG+CGG 0.599846 8_1:-59348874 Msa1203940:CDS
CACCGACAAGATCACGTGAT+GGG 0.601025 8_1:-59349848 Msa1203940:CDS
TCATATTCCACTATATGGAG+GGG 0.602380 8_1:-59348554 Msa1203940:CDS
CAAGCTTCCCATAACAGGAA+AGG 0.602700 8_1:-59349630 Msa1203940:CDS
ATGTGGGCCCAACGATGAGT+TGG 0.610898 8_1:+59349701 None:intergenic
CATATTCCACTATATGGAGG+GGG 0.611721 8_1:-59348553 Msa1203940:CDS
GCATTAAACTGATCCTTCCA+AGG 0.614580 8_1:+59349597 None:intergenic
TCTGCATAGCGTAAGTGTTG+GGG 0.616021 8_1:+59350054 None:intergenic
AGTCATATTCCACTATATGG+AGG 0.618199 8_1:-59348556 Msa1203940:CDS
ATTCATGGACACCATGCTAG+TGG 0.619012 8_1:+59348830 None:intergenic
TGACATTGAATATTATGGTG+AGG 0.620220 8_1:-59348483 Msa1203940:CDS
CTAATGGAGATGATGCAACA+TGG 0.632609 8_1:+59348760 None:intergenic
ATCACGTGATCTTGTCGGTG+AGG 0.634015 8_1:+59349851 None:intergenic
AGGAAGATTCACGTGAATGT+GGG 0.636052 8_1:+59349685 None:intergenic
GTCAAAAGCTTATGTATTAG+GGG 0.642134 8_1:-59348461 Msa1203940:CDS
GATGATGATGATGCAGATCG+TGG 0.642710 8_1:-59349549 Msa1203940:CDS
AGCTTGACTGCTCTTACGTG+AGG 0.648575 8_1:+59349647 None:intergenic
TCACCGACAAGATCACGTGA+TGG 0.649203 8_1:-59349849 Msa1203940:CDS
TATCATGTTTGATGAGTGAG+TGG 0.654886 8_1:+59350020 None:intergenic
GAATGAGGAGGAGATCCCAA+CGG 0.666085 8_1:+59349729 None:intergenic
GGGCATGCAAGGACAGCTAG+TGG 0.666634 8_1:+59350074 None:intergenic
GAGTTGGAATGAGAATGAGG+AGG 0.698188 8_1:+59349717 None:intergenic
AGACTCGATCATACCATACG+TGG 0.701427 8_1:-59348322 Msa1203940:three_prime_UTR
ACGTGAGGCAGAGTATCTCG+TGG 0.711321 8_1:+59349662 None:intergenic
TCACGCGACTCTTCCAACGA+CGG 0.716008 8_1:-59349795 Msa1203940:CDS
TGAGGCAGAGTATCTCGTGG+AGG 0.725109 8_1:+59349665 None:intergenic
GTTAGCCAAGACAGACTCCG+AGG 0.733209 8_1:-59349892 Msa1203940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATCATGTATTATATTATA+TGG - chr8_1:59349532-59349551 Msa1203940:CDS 10.0%
!! TAATTTATGTAGTAATTTAA+AGG - chr8_1:59349917-59349936 Msa1203940:CDS 10.0%
!! AATTTATGTAGTAATTTAAA+GGG - chr8_1:59349918-59349937 Msa1203940:CDS 10.0%
!! TAATCATGTATTATATTATA+TGG - chr8_1:59349532-59349551 Msa1203940:CDS 10.0%
!! TAATTTATGTAGTAATTTAA+AGG - chr8_1:59349917-59349936 Msa1203940:CDS 10.0%
!! AATTTATGTAGTAATTTAAA+GGG - chr8_1:59349918-59349937 Msa1203940:CDS 10.0%
!! ATTGAAAAATCAACATTATA+TGG + chr8_1:59349215-59349234 None:intergenic 15.0%
!! ATTTATGTAGTAATTTAAAG+GGG - chr8_1:59349919-59349938 Msa1203940:CDS 15.0%
!!! AAAATCTAAATTACACTTTT+GGG + chr8_1:59350064-59350083 None:intergenic 15.0%
!! ATTGAAAAATCAACATTATA+TGG + chr8_1:59349215-59349234 None:intergenic 15.0%
!! ATTTATGTAGTAATTTAAAG+GGG - chr8_1:59349919-59349938 Msa1203940:CDS 15.0%
!!! AAAATCTAAATTACACTTTT+GGG + chr8_1:59350064-59350083 None:intergenic 15.0%
!! TACATTGAAATTAGAAATGA+TGG + chr8_1:59348791-59348810 None:intergenic 20.0%
!! ATCATTTCTAATTTCAATGT+AGG - chr8_1:59348790-59348809 Msa1203940:CDS 20.0%
!!! CTTTTATTTGAATGCATATT+TGG + chr8_1:59349054-59349073 None:intergenic 20.0%
!!! TTTTAATTATAGTCACAATG+TGG + chr8_1:59349131-59349150 None:intergenic 20.0%
!! TTTCTTGATTGATAAAACTT+AGG + chr8_1:59349578-59349597 None:intergenic 20.0%
!! AGTAATAAATGAGAAACTAT+AGG - chr8_1:59349890-59349909 Msa1203940:CDS 20.0%
!! TATTGTTACATGAAATTTGA+AGG - chr8_1:59350032-59350051 Msa1203940:five_prime_UTR 20.0%
!!! CAAAATCTAAATTACACTTT+TGG + chr8_1:59350065-59350084 None:intergenic 20.0%
!!! AAGTGTAATTTAGATTTTGT+CGG - chr8_1:59350066-59350085 Msa1203940:five_prime_UTR 20.0%
!! TACATTGAAATTAGAAATGA+TGG + chr8_1:59348791-59348810 None:intergenic 20.0%
!! ATCATTTCTAATTTCAATGT+AGG - chr8_1:59348790-59348809 Msa1203940:CDS 20.0%
!!! CTTTTATTTGAATGCATATT+TGG + chr8_1:59349054-59349073 None:intergenic 20.0%
!!! TTTTAATTATAGTCACAATG+TGG + chr8_1:59349131-59349150 None:intergenic 20.0%
!! TTTCTTGATTGATAAAACTT+AGG + chr8_1:59349578-59349597 None:intergenic 20.0%
!! AGTAATAAATGAGAAACTAT+AGG - chr8_1:59349890-59349909 Msa1203940:CDS 20.0%
!! TATTGTTACATGAAATTTGA+AGG - chr8_1:59350032-59350051 Msa1203940:five_prime_UTR 20.0%
!!! CAAAATCTAAATTACACTTT+TGG + chr8_1:59350065-59350084 None:intergenic 20.0%
!!! AAGTGTAATTTAGATTTTGT+CGG - chr8_1:59350066-59350085 Msa1203940:five_prime_UTR 20.0%
! AGAGTTATTGTTAGTGTAAT+TGG + chr8_1:59348202-59348221 None:intergenic 25.0%
! AGATAAATCTGTATTTGAAG+TGG - chr8_1:59349150-59349169 Msa1203940:intron 25.0%
!! GATAAATCTGTATTTGAAGT+GGG - chr8_1:59349151-59349170 Msa1203940:intron 25.0%
!!! TTGTTTTGTGTATGTATGTT+TGG - chr8_1:59349277-59349296 Msa1203940:intron 25.0%
! TGATAGATTTATCATTCAAG+CGG - chr8_1:59349314-59349333 Msa1203940:intron 25.0%
! TGGTAATAATTGAGATCTAA+TGG + chr8_1:59349447-59349466 None:intergenic 25.0%
! TCAAAGATCTATTAAAGTGA+TGG - chr8_1:59349601-59349620 Msa1203940:CDS 25.0%
! TCTATTAAAGTGATGGTAAA+AGG - chr8_1:59349608-59349627 Msa1203940:CDS 25.0%
! ACCATTGACATTGAATATTA+TGG - chr8_1:59349700-59349719 Msa1203940:CDS 25.0%
! ACCATAATATTCAATGTCAA+TGG + chr8_1:59349704-59349723 None:intergenic 25.0%
!! TCAATTTTCTTGTTGAATCT+TGG + chr8_1:59349764-59349783 None:intergenic 25.0%
! GTTCTATTTCAACTTCAAAT+AGG - chr8_1:59350091-59350110 Msa1203940:five_prime_UTR 25.0%
! AGAGTTATTGTTAGTGTAAT+TGG + chr8_1:59348202-59348221 None:intergenic 25.0%
! AGATAAATCTGTATTTGAAG+TGG - chr8_1:59349150-59349169 Msa1203940:intron 25.0%
!! GATAAATCTGTATTTGAAGT+GGG - chr8_1:59349151-59349170 Msa1203940:intron 25.0%
!!! TTGTTTTGTGTATGTATGTT+TGG - chr8_1:59349277-59349296 Msa1203940:intron 25.0%
! TGATAGATTTATCATTCAAG+CGG - chr8_1:59349314-59349333 Msa1203940:intron 25.0%
! TGGTAATAATTGAGATCTAA+TGG + chr8_1:59349447-59349466 None:intergenic 25.0%
! TCAAAGATCTATTAAAGTGA+TGG - chr8_1:59349601-59349620 Msa1203940:CDS 25.0%
! TCTATTAAAGTGATGGTAAA+AGG - chr8_1:59349608-59349627 Msa1203940:CDS 25.0%
! ACCATTGACATTGAATATTA+TGG - chr8_1:59349700-59349719 Msa1203940:CDS 25.0%
! ACCATAATATTCAATGTCAA+TGG + chr8_1:59349704-59349723 None:intergenic 25.0%
!! TCAATTTTCTTGTTGAATCT+TGG + chr8_1:59349764-59349783 None:intergenic 25.0%
! GTTCTATTTCAACTTCAAAT+AGG - chr8_1:59350091-59350110 Msa1203940:five_prime_UTR 25.0%
! TTGTTGATGAAGTTTGAGTT+TGG + chr8_1:59348242-59348261 None:intergenic 30.0%
TAACATTGTAATGTTGTTGG+TGG + chr8_1:59348280-59348299 None:intergenic 30.0%
TTTAATGCCATTGAAGAAGA+AGG - chr8_1:59348606-59348625 Msa1203940:CDS 30.0%
AAGAAACAAACAAGAAAAGC+AGG + chr8_1:59348687-59348706 None:intergenic 30.0%
! TGTTTTCTCTCTCATTCTTT+GGG - chr8_1:59348719-59348738 Msa1203940:intron 30.0%
GAGAAATACCTTGAGAAAAA+TGG + chr8_1:59348769-59348788 None:intergenic 30.0%
TTTAGATTCACAGAATGACA+TGG - chr8_1:59348825-59348844 Msa1203940:CDS 30.0%
AAGTTGTCACAATTGTTCTT+TGG - chr8_1:59349071-59349090 Msa1203940:intron 30.0%
CAACATTATATGGAAAACCA+CGG + chr8_1:59349205-59349224 None:intergenic 30.0%
GATAGATTTATCATTCAAGC+GGG - chr8_1:59349315-59349334 Msa1203940:intron 30.0%
!!! TCTAAATGTCATTTTCACAG+TGG + chr8_1:59349385-59349404 None:intergenic 30.0%
!!! AGAAACACTGCAACATTTTT+TGG - chr8_1:59349402-59349421 Msa1203940:intron 30.0%
!!! GAAACACTGCAACATTTTTT+GGG - chr8_1:59349403-59349422 Msa1203940:intron 30.0%
!!! AAACACTGCAACATTTTTTG+GGG - chr8_1:59349404-59349423 Msa1203940:intron 30.0%
ATATTCAATGTCAATGGTAC+CGG + chr8_1:59349698-59349717 None:intergenic 30.0%
TGACATTGAATATTATGGTG+AGG - chr8_1:59349705-59349724 Msa1203940:CDS 30.0%
AGGTCAAAAGCTTATGTATT+AGG - chr8_1:59349725-59349744 Msa1203940:CDS 30.0%
GGTCAAAAGCTTATGTATTA+GGG - chr8_1:59349726-59349745 Msa1203940:CDS 30.0%
GTCAAAAGCTTATGTATTAG+GGG - chr8_1:59349727-59349746 Msa1203940:CDS 30.0%
!! AATTGAGTGTGCATTGATTA+TGG - chr8_1:59349778-59349797 Msa1203940:CDS 30.0%
ATTATGGATCCGAAGAAAAT+GGG - chr8_1:59349794-59349813 Msa1203940:CDS 30.0%
TCATTTATTACTTCCACGTA+TGG + chr8_1:59349882-59349901 None:intergenic 30.0%
! TGTAATTTAGATTTTGTCGG+TGG - chr8_1:59350069-59350088 Msa1203940:five_prime_UTR 30.0%
! TTGTTGATGAAGTTTGAGTT+TGG + chr8_1:59348242-59348261 None:intergenic 30.0%
TAACATTGTAATGTTGTTGG+TGG + chr8_1:59348280-59348299 None:intergenic 30.0%
TTTAATGCCATTGAAGAAGA+AGG - chr8_1:59348606-59348625 Msa1203940:CDS 30.0%
AAGAAACAAACAAGAAAAGC+AGG + chr8_1:59348687-59348706 None:intergenic 30.0%
! TGTTTTCTCTCTCATTCTTT+GGG - chr8_1:59348719-59348738 Msa1203940:intron 30.0%
GAGAAATACCTTGAGAAAAA+TGG + chr8_1:59348769-59348788 None:intergenic 30.0%
TTTAGATTCACAGAATGACA+TGG - chr8_1:59348825-59348844 Msa1203940:CDS 30.0%
AAGTTGTCACAATTGTTCTT+TGG - chr8_1:59349071-59349090 Msa1203940:intron 30.0%
CAACATTATATGGAAAACCA+CGG + chr8_1:59349205-59349224 None:intergenic 30.0%
GATAGATTTATCATTCAAGC+GGG - chr8_1:59349315-59349334 Msa1203940:intron 30.0%
!!! TCTAAATGTCATTTTCACAG+TGG + chr8_1:59349385-59349404 None:intergenic 30.0%
!!! AGAAACACTGCAACATTTTT+TGG - chr8_1:59349402-59349421 Msa1203940:intron 30.0%
!!! GAAACACTGCAACATTTTTT+GGG - chr8_1:59349403-59349422 Msa1203940:intron 30.0%
!!! AAACACTGCAACATTTTTTG+GGG - chr8_1:59349404-59349423 Msa1203940:intron 30.0%
ATATTCAATGTCAATGGTAC+CGG + chr8_1:59349698-59349717 None:intergenic 30.0%
TGACATTGAATATTATGGTG+AGG - chr8_1:59349705-59349724 Msa1203940:CDS 30.0%
AGGTCAAAAGCTTATGTATT+AGG - chr8_1:59349725-59349744 Msa1203940:CDS 30.0%
GGTCAAAAGCTTATGTATTA+GGG - chr8_1:59349726-59349745 Msa1203940:CDS 30.0%
GTCAAAAGCTTATGTATTAG+GGG - chr8_1:59349727-59349746 Msa1203940:CDS 30.0%
!! AATTGAGTGTGCATTGATTA+TGG - chr8_1:59349778-59349797 Msa1203940:CDS 30.0%
ATTATGGATCCGAAGAAAAT+GGG - chr8_1:59349794-59349813 Msa1203940:CDS 30.0%
TCATTTATTACTTCCACGTA+TGG + chr8_1:59349882-59349901 None:intergenic 30.0%
! TGTAATTTAGATTTTGTCGG+TGG - chr8_1:59350069-59350088 Msa1203940:five_prime_UTR 30.0%
TATCATGTTTGATGAGTGAG+TGG + chr8_1:59348171-59348190 None:intergenic 35.0%
GGCTAACATTGTAATGTTGT+TGG + chr8_1:59348283-59348302 None:intergenic 35.0%
CCAATTACCTTTCCTGTTAT+GGG + chr8_1:59348568-59348587 None:intergenic 35.0%
AAGAAGTCCTTCTTCTTCAA+TGG + chr8_1:59348616-59348635 None:intergenic 35.0%
! CTGTTTTCTCTCTCATTCTT+TGG - chr8_1:59348718-59348737 Msa1203940:intron 35.0%
! GAAAAATGGCAGGTTTTTGA+GGG + chr8_1:59348755-59348774 None:intergenic 35.0%
! AGAAAAATGGCAGGTTTTTG+AGG + chr8_1:59348756-59348775 None:intergenic 35.0%
!!! AAAACCTGCCATTTTTCTCA+AGG - chr8_1:59348758-59348777 Msa1203940:CDS 35.0%
AATACCTTGAGAAAAATGGC+AGG + chr8_1:59348765-59348784 None:intergenic 35.0%
!! GTAATCAGAAGTGTCGATAT+CGG + chr8_1:59348947-59348966 None:intergenic 35.0%
GTATTTCCCATTTAATACCG+TGG - chr8_1:59349185-59349204 Msa1203940:intron 35.0%
GGAAAACCACGGTATTAAAT+GGG + chr8_1:59349194-59349213 None:intergenic 35.0%
TGGAAAACCACGGTATTAAA+TGG + chr8_1:59349195-59349214 None:intergenic 35.0%
! CATTTTCACAGTGGAATTCA+TGG + chr8_1:59349376-59349395 None:intergenic 35.0%
GGAAGTCATATTCCACTATA+TGG - chr8_1:59349629-59349648 Msa1203940:CDS 35.0%
AGTCATATTCCACTATATGG+AGG - chr8_1:59349632-59349651 Msa1203940:CDS 35.0%
GTCATATTCCACTATATGGA+GGG - chr8_1:59349633-59349652 Msa1203940:CDS 35.0%
TCATATTCCACTATATGGAG+GGG - chr8_1:59349634-59349653 Msa1203940:CDS 35.0%
GATTATGGATCCGAAGAAAA+TGG - chr8_1:59349793-59349812 Msa1203940:CDS 35.0%
! ATAGGCTTACCCATTTTCTT+CGG + chr8_1:59349806-59349825 None:intergenic 35.0%
! ATTCGCACATGAGTTTTCTT+TGG - chr8_1:59349971-59349990 Msa1203940:five_prime_UTR 35.0%
TATCATGTTTGATGAGTGAG+TGG + chr8_1:59348171-59348190 None:intergenic 35.0%
GGCTAACATTGTAATGTTGT+TGG + chr8_1:59348283-59348302 None:intergenic 35.0%
CCAATTACCTTTCCTGTTAT+GGG + chr8_1:59348568-59348587 None:intergenic 35.0%
AAGAAGTCCTTCTTCTTCAA+TGG + chr8_1:59348616-59348635 None:intergenic 35.0%
! CTGTTTTCTCTCTCATTCTT+TGG - chr8_1:59348718-59348737 Msa1203940:intron 35.0%
! GAAAAATGGCAGGTTTTTGA+GGG + chr8_1:59348755-59348774 None:intergenic 35.0%
! AGAAAAATGGCAGGTTTTTG+AGG + chr8_1:59348756-59348775 None:intergenic 35.0%
!!! AAAACCTGCCATTTTTCTCA+AGG - chr8_1:59348758-59348777 Msa1203940:CDS 35.0%
AATACCTTGAGAAAAATGGC+AGG + chr8_1:59348765-59348784 None:intergenic 35.0%
!! GTAATCAGAAGTGTCGATAT+CGG + chr8_1:59348947-59348966 None:intergenic 35.0%
GTATTTCCCATTTAATACCG+TGG - chr8_1:59349185-59349204 Msa1203940:intron 35.0%
GGAAAACCACGGTATTAAAT+GGG + chr8_1:59349194-59349213 None:intergenic 35.0%
TGGAAAACCACGGTATTAAA+TGG + chr8_1:59349195-59349214 None:intergenic 35.0%
! CATTTTCACAGTGGAATTCA+TGG + chr8_1:59349376-59349395 None:intergenic 35.0%
GGAAGTCATATTCCACTATA+TGG - chr8_1:59349629-59349648 Msa1203940:CDS 35.0%
AGTCATATTCCACTATATGG+AGG - chr8_1:59349632-59349651 Msa1203940:CDS 35.0%
GTCATATTCCACTATATGGA+GGG - chr8_1:59349633-59349652 Msa1203940:CDS 35.0%
TCATATTCCACTATATGGAG+GGG - chr8_1:59349634-59349653 Msa1203940:CDS 35.0%
GATTATGGATCCGAAGAAAA+TGG - chr8_1:59349793-59349812 Msa1203940:CDS 35.0%
! ATAGGCTTACCCATTTTCTT+CGG + chr8_1:59349806-59349825 None:intergenic 35.0%
! ATTCGCACATGAGTTTTCTT+TGG - chr8_1:59349971-59349990 Msa1203940:five_prime_UTR 35.0%
ATCTGCATAGCGTAAGTGTT+GGG + chr8_1:59348138-59348157 None:intergenic 40.0%
AATCTGCATAGCGTAAGTGT+TGG + chr8_1:59348139-59348158 None:intergenic 40.0%
!!! ATGTTGTTGGTGGTGTTTTC+TGG + chr8_1:59348270-59348289 None:intergenic 40.0%
! TTGAAGTGGGCTTGAGTTAA+AGG + chr8_1:59348436-59348455 None:intergenic 40.0%
! GATGAGTTGGAATGAGAATG+AGG + chr8_1:59348477-59348496 None:intergenic 40.0%
TTCTCATTCCAACTCATCGT+TGG - chr8_1:59348479-59348498 Msa1203940:CDS 40.0%
TCTCATTCCAACTCATCGTT+GGG - chr8_1:59348480-59348499 Msa1203940:CDS 40.0%
AGGAAGATTCACGTGAATGT+GGG + chr8_1:59348506-59348525 None:intergenic 40.0%
CCCATAACAGGAAAGGTAAT+TGG - chr8_1:59348565-59348584 Msa1203940:CDS 40.0%
GCCAATTACCTTTCCTGTTA+TGG + chr8_1:59348569-59348588 None:intergenic 40.0%
GCATTAAACTGATCCTTCCA+AGG + chr8_1:59348594-59348613 None:intergenic 40.0%
CAGGAAAATAGCATCTCCTA+GGG + chr8_1:59348668-59348687 None:intergenic 40.0%
TCGATATCGGACATAGACAT+CGG + chr8_1:59348934-59348953 None:intergenic 40.0%
!! CAGTAATGAAGCACTGACAT+CGG + chr8_1:59349026-59349045 None:intergenic 40.0%
ATTTATCATTCAAGCGGGTG+CGG - chr8_1:59349320-59349339 Msa1203940:intron 40.0%
CTAATGGAGATGATGCAACA+TGG + chr8_1:59349431-59349450 None:intergenic 40.0%
TACCAACTTACACTAGCAAC+TGG - chr8_1:59349462-59349481 Msa1203940:CDS 40.0%
TTCCAGTTGCTAGTGTAAGT+TGG + chr8_1:59349467-59349486 None:intergenic 40.0%
CATATTCCACTATATGGAGG+GGG - chr8_1:59349635-59349654 Msa1203940:CDS 40.0%
GCAAGATTGAACACTGTCAA+TGG - chr8_1:59349659-59349678 Msa1203940:CDS 40.0%
! AGCTTATGTATTAGGGGCAT+TGG - chr8_1:59349733-59349752 Msa1203940:CDS 40.0%
! CACTTGTTGGTAAGTCGAAT+AGG + chr8_1:59349824-59349843 None:intergenic 40.0%
TAACTCATACGCACACTTGT+TGG + chr8_1:59349837-59349856 None:intergenic 40.0%
ATCTGCATAGCGTAAGTGTT+GGG + chr8_1:59348138-59348157 None:intergenic 40.0%
AATCTGCATAGCGTAAGTGT+TGG + chr8_1:59348139-59348158 None:intergenic 40.0%
!!! ATGTTGTTGGTGGTGTTTTC+TGG + chr8_1:59348270-59348289 None:intergenic 40.0%
! TTGAAGTGGGCTTGAGTTAA+AGG + chr8_1:59348436-59348455 None:intergenic 40.0%
! GATGAGTTGGAATGAGAATG+AGG + chr8_1:59348477-59348496 None:intergenic 40.0%
TTCTCATTCCAACTCATCGT+TGG - chr8_1:59348479-59348498 Msa1203940:CDS 40.0%
TCTCATTCCAACTCATCGTT+GGG - chr8_1:59348480-59348499 Msa1203940:CDS 40.0%
AGGAAGATTCACGTGAATGT+GGG + chr8_1:59348506-59348525 None:intergenic 40.0%
CCCATAACAGGAAAGGTAAT+TGG - chr8_1:59348565-59348584 Msa1203940:CDS 40.0%
GCCAATTACCTTTCCTGTTA+TGG + chr8_1:59348569-59348588 None:intergenic 40.0%
GCATTAAACTGATCCTTCCA+AGG + chr8_1:59348594-59348613 None:intergenic 40.0%
CAGGAAAATAGCATCTCCTA+GGG + chr8_1:59348668-59348687 None:intergenic 40.0%
TCGATATCGGACATAGACAT+CGG + chr8_1:59348934-59348953 None:intergenic 40.0%
!! CAGTAATGAAGCACTGACAT+CGG + chr8_1:59349026-59349045 None:intergenic 40.0%
ATTTATCATTCAAGCGGGTG+CGG - chr8_1:59349320-59349339 Msa1203940:intron 40.0%
CTAATGGAGATGATGCAACA+TGG + chr8_1:59349431-59349450 None:intergenic 40.0%
TACCAACTTACACTAGCAAC+TGG - chr8_1:59349462-59349481 Msa1203940:CDS 40.0%
TTCCAGTTGCTAGTGTAAGT+TGG + chr8_1:59349467-59349486 None:intergenic 40.0%
CATATTCCACTATATGGAGG+GGG - chr8_1:59349635-59349654 Msa1203940:CDS 40.0%
GCAAGATTGAACACTGTCAA+TGG - chr8_1:59349659-59349678 Msa1203940:CDS 40.0%
! AGCTTATGTATTAGGGGCAT+TGG - chr8_1:59349733-59349752 Msa1203940:CDS 40.0%
! CACTTGTTGGTAAGTCGAAT+AGG + chr8_1:59349824-59349843 None:intergenic 40.0%
TAACTCATACGCACACTTGT+TGG + chr8_1:59349837-59349856 None:intergenic 40.0%
! TCTGCATAGCGTAAGTGTTG+GGG + chr8_1:59348137-59348156 None:intergenic 45.0%
TTGTGTTAGGCTGCTTACCT+CGG + chr8_1:59348316-59348335 None:intergenic 45.0%
TTGTCGGTGAGGATTGTGTT+AGG + chr8_1:59348329-59348348 None:intergenic 45.0%
!!! TGTTGTTTTCTCACCGTCGT+TGG + chr8_1:59348409-59348428 None:intergenic 45.0%
GAGTTGGAATGAGAATGAGG+AGG + chr8_1:59348474-59348493 None:intergenic 45.0%
GAGGAAGATTCACGTGAATG+TGG + chr8_1:59348507-59348526 None:intergenic 45.0%
CAAGCTTCCCATAACAGGAA+AGG - chr8_1:59348558-59348577 Msa1203940:CDS 45.0%
! GATGATGATGATGCAGATCG+TGG - chr8_1:59348639-59348658 Msa1203940:intron 45.0%
GCAGGAAAATAGCATCTCCT+AGG + chr8_1:59348669-59348688 None:intergenic 45.0%
CATCGGGACAAAGAGATTGA+CGG + chr8_1:59348917-59348936 None:intergenic 45.0%
CGATATCGGACATAGACATC+GGG + chr8_1:59348933-59348952 None:intergenic 45.0%
ATTCATGGACACCATGCTAG+TGG + chr8_1:59349361-59349380 None:intergenic 45.0%
GAACACTGTCAATGGTTCAC+CGG - chr8_1:59349667-59349686 Msa1203940:CDS 45.0%
AGACTCGATCATACCATACG+TGG - chr8_1:59349866-59349885 Msa1203940:CDS 45.0%
! TCTGCATAGCGTAAGTGTTG+GGG + chr8_1:59348137-59348156 None:intergenic 45.0%
TTGTGTTAGGCTGCTTACCT+CGG + chr8_1:59348316-59348335 None:intergenic 45.0%
TTGTCGGTGAGGATTGTGTT+AGG + chr8_1:59348329-59348348 None:intergenic 45.0%
!!! TGTTGTTTTCTCACCGTCGT+TGG + chr8_1:59348409-59348428 None:intergenic 45.0%
GAGTTGGAATGAGAATGAGG+AGG + chr8_1:59348474-59348493 None:intergenic 45.0%
GAGGAAGATTCACGTGAATG+TGG + chr8_1:59348507-59348526 None:intergenic 45.0%
CAAGCTTCCCATAACAGGAA+AGG - chr8_1:59348558-59348577 Msa1203940:CDS 45.0%
! GATGATGATGATGCAGATCG+TGG - chr8_1:59348639-59348658 Msa1203940:intron 45.0%
GCAGGAAAATAGCATCTCCT+AGG + chr8_1:59348669-59348688 None:intergenic 45.0%
CATCGGGACAAAGAGATTGA+CGG + chr8_1:59348917-59348936 None:intergenic 45.0%
CGATATCGGACATAGACATC+GGG + chr8_1:59348933-59348952 None:intergenic 45.0%
ATTCATGGACACCATGCTAG+TGG + chr8_1:59349361-59349380 None:intergenic 45.0%
GAACACTGTCAATGGTTCAC+CGG - chr8_1:59349667-59349686 Msa1203940:CDS 45.0%
AGACTCGATCATACCATACG+TGG - chr8_1:59349866-59349885 Msa1203940:CDS 45.0%
ATCACGTGATCTTGTCGGTG+AGG + chr8_1:59348340-59348359 None:intergenic 50.0%
TCACCGACAAGATCACGTGA+TGG - chr8_1:59348339-59348358 Msa1203940:exon 50.0%
CACCGACAAGATCACGTGAT+GGG - chr8_1:59348340-59348359 Msa1203940:exon 50.0%
AGCCCATCACGTGATCTTGT+CGG + chr8_1:59348345-59348364 None:intergenic 50.0%
!! ATCCCAACGGGCTTTGAAGT+GGG + chr8_1:59348449-59348468 None:intergenic 50.0%
AATGAGGAGGAGATCCCAAC+GGG + chr8_1:59348461-59348480 None:intergenic 50.0%
GAATGAGGAGGAGATCCCAA+CGG + chr8_1:59348462-59348481 None:intergenic 50.0%
AGCTTGACTGCTCTTACGTG+AGG + chr8_1:59348544-59348563 None:intergenic 50.0%
GCAGTCAAGCTTCCCATAAC+AGG - chr8_1:59348553-59348572 Msa1203940:CDS 50.0%
GGAAAGGTAATTGGCGTCCT+TGG - chr8_1:59348574-59348593 Msa1203940:CDS 50.0%
AGGTAATTGGCGTCCTTGGA+AGG - chr8_1:59348578-59348597 Msa1203940:CDS 50.0%
ATGCAGATCGTGGATTCCCT+AGG - chr8_1:59348649-59348668 Msa1203940:intron 50.0%
! CAATGGTTCACCGGTTGAAC+CGG - chr8_1:59349676-59349695 Msa1203940:CDS 50.0%
!! GTCAATGGTACCGGTTCAAC+CGG + chr8_1:59349689-59349708 None:intergenic 50.0%
ATCACGTGATCTTGTCGGTG+AGG + chr8_1:59348340-59348359 None:intergenic 50.0%
TCACCGACAAGATCACGTGA+TGG - chr8_1:59348339-59348358 Msa1203940:exon 50.0%
CACCGACAAGATCACGTGAT+GGG - chr8_1:59348340-59348359 Msa1203940:exon 50.0%
AGCCCATCACGTGATCTTGT+CGG + chr8_1:59348345-59348364 None:intergenic 50.0%
!! ATCCCAACGGGCTTTGAAGT+GGG + chr8_1:59348449-59348468 None:intergenic 50.0%
AATGAGGAGGAGATCCCAAC+GGG + chr8_1:59348461-59348480 None:intergenic 50.0%
GAATGAGGAGGAGATCCCAA+CGG + chr8_1:59348462-59348481 None:intergenic 50.0%
AGCTTGACTGCTCTTACGTG+AGG + chr8_1:59348544-59348563 None:intergenic 50.0%
GCAGTCAAGCTTCCCATAAC+AGG - chr8_1:59348553-59348572 Msa1203940:CDS 50.0%
GGAAAGGTAATTGGCGTCCT+TGG - chr8_1:59348574-59348593 Msa1203940:CDS 50.0%
AGGTAATTGGCGTCCTTGGA+AGG - chr8_1:59348578-59348597 Msa1203940:CDS 50.0%
ATGCAGATCGTGGATTCCCT+AGG - chr8_1:59348649-59348668 Msa1203940:intron 50.0%
! CAATGGTTCACCGGTTGAAC+CGG - chr8_1:59349676-59349695 Msa1203940:CDS 50.0%
!! GTCAATGGTACCGGTTCAAC+CGG + chr8_1:59349689-59349708 None:intergenic 50.0%
!! CGTAAGTGTTGGGGCATGCA+AGG + chr8_1:59348128-59348147 None:intergenic 55.0%
GTTAGCCAAGACAGACTCCG+AGG - chr8_1:59348296-59348315 Msa1203940:three_prime_UTR 55.0%
GCTTACCTCGGAGTCTGTCT+TGG + chr8_1:59348304-59348323 None:intergenic 55.0%
CGTTGGAAGAGTCGCGTGAT+GGG + chr8_1:59348392-59348411 None:intergenic 55.0%
TCGTTGGAAGAGTCGCGTGA+TGG + chr8_1:59348393-59348412 None:intergenic 55.0%
TCACGCGACTCTTCCAACGA+CGG - chr8_1:59348393-59348412 Msa1203940:CDS 55.0%
AAGCCCACTTCAAAGCCCGT+TGG - chr8_1:59348443-59348462 Msa1203940:CDS 55.0%
AGCCCACTTCAAAGCCCGTT+GGG - chr8_1:59348444-59348463 Msa1203940:CDS 55.0%
!! GATCCCAACGGGCTTTGAAG+TGG + chr8_1:59348450-59348469 None:intergenic 55.0%
ATGTGGGCCCAACGATGAGT+TGG + chr8_1:59348490-59348509 None:intergenic 55.0%
! TGAGGCAGAGTATCTCGTGG+AGG + chr8_1:59348526-59348545 None:intergenic 55.0%
! ACGTGAGGCAGAGTATCTCG+TGG + chr8_1:59348529-59348548 None:intergenic 55.0%
GTCAGGAGTTGCCACTAGCA+TGG - chr8_1:59349347-59349366 Msa1203940:intron 55.0%
CTTGCTCCCCCTCCATATAG+TGG + chr8_1:59349644-59349663 None:intergenic 55.0%
!! CGTAAGTGTTGGGGCATGCA+AGG + chr8_1:59348128-59348147 None:intergenic 55.0%
GTTAGCCAAGACAGACTCCG+AGG - chr8_1:59348296-59348315 Msa1203940:three_prime_UTR 55.0%
GCTTACCTCGGAGTCTGTCT+TGG + chr8_1:59348304-59348323 None:intergenic 55.0%
CGTTGGAAGAGTCGCGTGAT+GGG + chr8_1:59348392-59348411 None:intergenic 55.0%
TCGTTGGAAGAGTCGCGTGA+TGG + chr8_1:59348393-59348412 None:intergenic 55.0%
TCACGCGACTCTTCCAACGA+CGG - chr8_1:59348393-59348412 Msa1203940:CDS 55.0%
AAGCCCACTTCAAAGCCCGT+TGG - chr8_1:59348443-59348462 Msa1203940:CDS 55.0%
AGCCCACTTCAAAGCCCGTT+GGG - chr8_1:59348444-59348463 Msa1203940:CDS 55.0%
!! GATCCCAACGGGCTTTGAAG+TGG + chr8_1:59348450-59348469 None:intergenic 55.0%
ATGTGGGCCCAACGATGAGT+TGG + chr8_1:59348490-59348509 None:intergenic 55.0%
! TGAGGCAGAGTATCTCGTGG+AGG + chr8_1:59348526-59348545 None:intergenic 55.0%
! ACGTGAGGCAGAGTATCTCG+TGG + chr8_1:59348529-59348548 None:intergenic 55.0%
GTCAGGAGTTGCCACTAGCA+TGG - chr8_1:59349347-59349366 Msa1203940:intron 55.0%
CTTGCTCCCCCTCCATATAG+TGG + chr8_1:59349644-59349663 None:intergenic 55.0%
GGGCATGCAAGGACAGCTAG+TGG + chr8_1:59348117-59348136 None:intergenic 60.0%
CAAGCGGGTGCGGATTTGTC+AGG - chr8_1:59349330-59349349 Msa1203940:intron 60.0%
GGGCATGCAAGGACAGCTAG+TGG + chr8_1:59348117-59348136 None:intergenic 60.0%
CAAGCGGGTGCGGATTTGTC+AGG - chr8_1:59349330-59349349 Msa1203940:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 59348088 59350122 59348088 ID=Msa1203940;Name=Msa1203940
chr8_1 mRNA 59348088 59350122 59348088 ID=Msa1203940-mRNA-1;Parent=Msa1203940;Name=Msa1203940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=173|1|1|1|1|1|3|263|330
chr8_1 exon 59348088 59348638 59348088 ID=Msa1203940-mRNA-1:exon:19163;Parent=Msa1203940-mRNA-1
chr8_1 exon 59348722 59348907 59348722 ID=Msa1203940-mRNA-1:exon:19162;Parent=Msa1203940-mRNA-1
chr8_1 exon 59349431 59350122 59349431 ID=Msa1203940-mRNA-1:exon:19161;Parent=Msa1203940-mRNA-1
chr8_1 five_prime_UTR 59349950 59350122 59349950 ID=Msa1203940-mRNA-1:five_prime_utr;Parent=Msa1203940-mRNA-1
chr8_1 CDS 59349431 59349949 59349431 ID=Msa1203940-mRNA-1:cds;Parent=Msa1203940-mRNA-1
chr8_1 CDS 59348722 59348907 59348722 ID=Msa1203940-mRNA-1:cds;Parent=Msa1203940-mRNA-1
chr8_1 CDS 59348351 59348638 59348351 ID=Msa1203940-mRNA-1:cds;Parent=Msa1203940-mRNA-1
chr8_1 three_prime_UTR 59348088 59348350 59348088 ID=Msa1203940-mRNA-1:three_prime_utr;Parent=Msa1203940-mRNA-1
Gene Sequence

>Msa1203940

ATGAAACCAGAAAACACCACCAACAACATTACAATGTTAGCCAAGACAGACTCCGAGGTAAGCAGCCTAACACAATCCTCACCGACAAGATCACGTGATGGGCTTCGTGCAGTTTACTACGTACAAAGCCCATCACGCGACTCTTCCAACGACGGTGAGAAAACAACAAACTCCTTTAACTCAAGCCCACTTCAAAGCCCGTTGGGATCTCCTCCTCATTCTCATTCCAACTCATCGTTGGGCCCACATTCACGTGAATCTTCCTCCACGAGATACTCTGCCTCACGTAAGAGCAGTCAAGCTTCCCATAACAGGAAAGGTAATTGGCGTCCTTGGAAGGATCAGTTTAATGCCATTGAAGAAGAAGGACTTCTTGATGATGATGATGATGCAGATCGTGGATTCCCTAGGAGATGCTATTTTCCTGCTTTTCTTGTTTGTTTCTTTGTTCTCTTCACTGTTTTCTCTCTCATTCTTTGGGCTGCAAGTCGCCCTCAAAAACCTGCCATTTTTCTCAAGAGTATAACATTTGATAGATTTATCATTCAAGCGGGTGCGGATTTGTCAGGAGTTGCCACTAGCATGGTGTCCATGAATTCCACTGTGAAAATGACATTTAGAAACACTGCAACATTTTTTGGGGTCCATGTTGCATCATCTCCATTAGATCTCAATTATTACCAACTTACACTAGCAACTGGAAATATGCCTAAGTTTTATCAATCAAGAAAAAGTCAAAGATCTATTAAAGTGATGGTAAAAGGAAGTCATATTCCACTATATGGAGGGGGAGCAAGATTGAACACTGTCAATGGTTCACCGGTTGAACCGGTACCATTGACATTGAATATTATGGTGAGGTCAAAAGCTTATGTATTAGGGGCATTGGTGAAGCCAAGATTCAACAAGAAAATTGAGTGTGCATTGATTATGGATCCGAAGAAAATGGGTAAGCCTATTCGACTTACCAACAAGTGTGCGTATGAGTTATAA
Protein sequence

>Msa1203940

MKPENTTNNITMLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSPPHSHSNSSLGPHSRESSSTRYSASRKSSQASHNRKGNWRPWKDQFNAIEEEGLLDDDDDADRGFPRRCYFPAFLVCFFVLFTVFSLILWAASRPQKPAIFLKSITFDRFIIQAGADLSGVATSMVSMNSTVKMTFRNTATFFGVHVASSPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVKGSHIPLYGGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPRFNKKIECALIMDPKKMGKPIRLTNKCAYEL*