AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215980 MtrunA17_Chr4g0065401 99.727 733 2 0 1 733 1 733 0.0 1517
Msa1215980 MtrunA17_Chr4g0068511 33.792 654 378 10 35 664 216 838 2.47e-106 345
Msa1215980 MtrunA17_Chr4g0035581 35.394 647 361 14 68 685 170 788 5.12e-106 342
Msa1215980 MtrunA17_Chr8g0381871 33.234 671 369 13 39 658 20 662 3.49e-103 335
Msa1215980 MtrunA17_Chr2g0296441 34.091 616 336 12 93 667 76 662 4.15e-100 325
Msa1215980 MtrunA17_Chr4g0052131 34.173 635 340 15 61 648 38 641 8.22e-96 314
Msa1215980 MtrunA17_Chr7g0269941 36.066 549 311 11 124 658 131 653 9.19e-96 312
Msa1215980 MtrunA17_Chr7g0263661 32.727 605 315 16 118 651 124 707 9.15e-83 280
Msa1215980 MtrunA17_Chr2g0279361 30.873 664 403 18 57 696 34 665 1.77e-77 262
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215980 AT2G07690.1 78.581 733 151 2 1 733 1 727 0.0 1189
Msa1215980 AT2G07690.2 78.308 733 151 3 1 733 1 725 0.0 1180
Msa1215980 AT2G16440.1 31.669 701 421 12 35 703 140 814 8.03e-107 345
Msa1215980 AT1G44900.2 33.692 650 380 9 35 661 216 837 2.92e-105 343
Msa1215980 AT1G44900.1 33.692 650 380 9 35 661 218 839 3.33e-105 343
Msa1215980 AT5G44635.1 32.789 674 370 13 39 658 20 664 1.34e-101 331
Msa1215980 AT5G44635.2 32.789 674 370 13 39 658 20 664 1.92e-101 331
Msa1215980 AT5G46280.3 33.022 642 344 14 57 648 28 633 9.13e-101 325
Msa1215980 AT5G46280.1 33.022 642 344 14 57 648 28 633 6.86e-100 325
Msa1215980 AT5G46280.2 33.121 628 334 13 57 634 28 619 2.64e-99 319
Msa1215980 AT4G02060.2 33.486 657 380 15 40 658 14 651 2.63e-97 317
Msa1215980 AT4G02060.1 33.486 657 380 15 40 658 14 651 2.63e-97 317
Msa1215980 AT3G09660.2 31.746 630 345 17 84 651 97 703 1.13e-88 295
Msa1215980 AT3G09660.3 31.898 627 345 17 84 651 97 700 1.36e-88 295
Msa1215980 AT3G09660.1 31.746 630 345 17 84 651 97 703 2.80e-88 295
Msa1215980 AT5G46280.4 32.574 571 303 12 57 577 28 566 1.12e-85 281
Msa1215980 AT2G14050.1 33.725 510 291 12 149 642 131 609 5.66e-71 244
Msa1215980 AT2G14050.2 33.725 510 291 12 149 642 131 609 6.67e-71 244

Find 206 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATCAACGAGAAGATATT+TGG 0.123004 8_1:-77480904 None:intergenic
CCTATTGCTGTTTATACTTC+TGG 0.178036 8_1:+77483527 Msa1215980:CDS
AAGATTGCTCCGTCTATATT+TGG 0.214278 8_1:+77482918 Msa1215980:CDS
TGTATCTCACGGGCCATTTC+AGG 0.220604 8_1:-77486022 None:intergenic
TCCAGCTGCCTTACAGTAAT+TGG 0.220836 8_1:-77484964 None:intergenic
AGAATGCCAAGCTTCATTTA+AGG 0.228020 8_1:+77486739 Msa1215980:three_prime_UTR
TAGATCTCTGATTTGGGGTT+AGG 0.231546 8_1:-77480688 None:intergenic
TACAGACAACTATTCTTTCT+AGG 0.235658 8_1:+77484121 Msa1215980:CDS
TCAGATTCTTCTTACTTCTA+AGG 0.251667 8_1:+77481176 Msa1215980:CDS
TGAGTTCTTCGAGTTATTTA+AGG 0.252849 8_1:+77486771 Msa1215980:three_prime_UTR
CTGATTTGGGGTTAGGGTTT+CGG 0.258519 8_1:-77480681 None:intergenic
AACTGCGGCGGCGCAGGTTT+TGG 0.265279 8_1:+77481089 Msa1215980:CDS
GAGAAAGGCGTGTTGTATTT+CGG 0.296469 8_1:+77486671 Msa1215980:CDS
CAGTTAGACAGCCTTATATC+AGG 0.298824 8_1:+77482442 Msa1215980:CDS
TCGAAGCTTGTTAAAATTGC+TGG 0.301023 8_1:+77481715 Msa1215980:CDS
CAAATATCTTCTCGTTGATA+TGG 0.306777 8_1:+77480905 Msa1215980:CDS
GTTCCGTGTCGGCCAGGACT+TGG 0.311021 8_1:+77481820 Msa1215980:CDS
GACTTACAGTGCTGCTATCT+TGG 0.313274 8_1:-77483589 None:intergenic
ACCTGTGACTTTGCAGTAGA+TGG 0.318792 8_1:-77483148 None:intergenic
TTCTTCTACATGATACCTAA+TGG 0.324040 8_1:-77486720 None:intergenic
AAGAATAAGAGGGAGGGTTT+TGG 0.333172 8_1:-77480609 None:intergenic
CCGTTTCCAAGGAAGAAAAT+TGG 0.334699 8_1:+77484495 Msa1215980:CDS
GTTCAGATAAAGAGAAGAAT+CGG 0.335265 8_1:+77486138 Msa1215980:CDS
CTCTCTGGTGCATGATTAGA+AGG 0.339833 8_1:-77486630 None:intergenic
TTCCGTGTCGGCCAGGACTT+GGG 0.342804 8_1:+77481821 Msa1215980:CDS
ATTCCTACAACCCTGATATA+AGG 0.342845 8_1:-77482453 None:intergenic
CCAGAAGTATAAACAGCAAT+AGG 0.346443 8_1:-77483527 None:intergenic
TGGCCATGATGATGTCAAAA+AGG 0.353386 8_1:+77482938 Msa1215980:CDS
AACGGTTGTTATTCCTGCTT+TGG 0.353473 8_1:-77483907 None:intergenic
ACGAAGGTTGCTGGAGATAC+TGG 0.362908 8_1:+77481123 Msa1215980:CDS
GAATGCCAAGCTTCATTTAA+GGG 0.370794 8_1:+77486740 Msa1215980:three_prime_UTR
CTGTTTCGATGAGATCGCTT+GGG 0.370900 8_1:+77481205 Msa1215980:CDS
AGATCTCTGATTTGGGGTTA+GGG 0.372955 8_1:-77480687 None:intergenic
AAATATAGACGGAGCAATCT+TGG 0.375907 8_1:-77482916 None:intergenic
GATATTTGGGATTGTGAAGA+AGG 0.376760 8_1:-77480890 None:intergenic
CGGAGTTTAGAAGGAAGATC+AGG 0.377014 8_1:-77480948 None:intergenic
GAGGATGGTGTGGTTGGAGA+TGG 0.382041 8_1:-77480802 None:intergenic
GCTGTTTATACTTCTGGAAA+AGG 0.386854 8_1:+77483533 Msa1215980:CDS
CTTACAATTCTTACATATCA+AGG 0.387938 8_1:-77481785 None:intergenic
GTAAGGAAAGACATTGTTAC+CGG 0.388239 8_1:-77480859 None:intergenic
ACGGATAGAAGCAAGTTTCT+AGG 0.389472 8_1:-77482192 None:intergenic
ATGGGAAGAAGAAGAATAAG+AGG 0.390349 8_1:-77480620 None:intergenic
AACAATAAGCCACGGATCAA+TGG 0.390998 8_1:-77482009 None:intergenic
AGTTTGAAGACGAAGGTTGC+TGG 0.391003 8_1:+77481114 Msa1215980:CDS
CTGTTCCATGGCTTCATGAA+TGG 0.399516 8_1:-77483868 None:intergenic
GGAGCAGATCGGAGTTTAGA+AGG 0.399895 8_1:-77480957 None:intergenic
CCAGATGGGGTGAGATTAAG+AGG 0.400870 8_1:+77483097 Msa1215980:CDS
GATAAATCTCTCACCTGAAA+TGG 0.405703 8_1:+77486009 Msa1215980:CDS
CCTCTTAATCTCACCCCATC+TGG 0.406630 8_1:-77483097 None:intergenic
TGCTGGAGATACTGGTGATA+TGG 0.408690 8_1:+77481131 Msa1215980:CDS
TGAAGAAGGCTTTCTCTGTA+AGG 0.411037 8_1:-77480876 None:intergenic
TCAACATACTTGCTCTTGTC+GGG 0.412217 8_1:-77482032 None:intergenic
CAGCCTTATATCAGGGTTGT+AGG 0.413282 8_1:+77482450 Msa1215980:CDS
TGTTATTCCTGCTTTGGCTA+TGG 0.413969 8_1:-77483901 None:intergenic
GATATCAATGTGTTACTTCT+CGG 0.414213 8_1:+77483121 Msa1215980:CDS
GATGGTGTGGTTGGAGATGG+TGG 0.418214 8_1:-77480799 None:intergenic
AGGCGGCAAGCAAATGAAAC+TGG 0.418931 8_1:+77484925 Msa1215980:CDS
ATATCAATGTGTTACTTCTC+GGG 0.421636 8_1:+77483122 Msa1215980:CDS
ACAATGGATGCAGCTAAGTC+TGG 0.421713 8_1:+77485974 Msa1215980:CDS
TCAGTCTTCTTTCTGATATG+TGG 0.422676 8_1:-77486170 None:intergenic
TTCATCCGTAACTTTGAAAC+CGG 0.423579 8_1:+77480840 Msa1215980:CDS
TAACAACCGTTCTTAATTCA+AGG 0.424580 8_1:+77483919 Msa1215980:CDS
ATATCAACGAGAAGATATTT+GGG 0.427630 8_1:-77480903 None:intergenic
TGGTTTACACACCTATCTTC+TGG 0.427654 8_1:-77483771 None:intergenic
TGAAATGGCCCGTGAGATAC+AGG 0.429731 8_1:+77486024 Msa1215980:CDS
GTGCAACGAGGGGCGAGAAC+AGG 0.440941 8_1:+77484468 Msa1215980:CDS
TGTTACCGGTTTCAAAGTTA+CGG 0.442414 8_1:-77480845 None:intergenic
AAGTAGAGTACAAGCGAGAA+AGG 0.446154 8_1:+77486656 Msa1215980:CDS
ATTGATGATCTCGGCAGAAT+GGG 0.446684 8_1:+77486192 Msa1215980:CDS
CTTGAAGTTGCAAGAAAATC+CGG 0.449099 8_1:+77482064 Msa1215980:CDS
GGATATAGTTTGCTGTTCCA+TGG 0.450556 8_1:-77483880 None:intergenic
CGAAGCTTGTTAAAATTGCT+GGG 0.450647 8_1:+77481716 Msa1215980:CDS
GTTTGAAACTGCGGCGGCGC+AGG 0.452541 8_1:+77481083 Msa1215980:intron
TCCGTGTCGGCCAGGACTTG+GGG 0.453112 8_1:+77481822 Msa1215980:CDS
TAAAGAGAAGAATCGGGATT+GGG 0.454048 8_1:+77486145 Msa1215980:CDS
TCTTCTACATGATACCTAAT+GGG 0.456395 8_1:-77486719 None:intergenic
ACCAATTACTGTAAGGCAGC+TGG 0.457399 8_1:+77484963 Msa1215980:CDS
AGACACGGTGAAAAGCCTTA+TGG 0.460557 8_1:-77485951 None:intergenic
TGTACTCTACTTCGTCTCTC+TGG 0.460659 8_1:-77486645 None:intergenic
TCTAATGTCAATCTTATTGT+GGG 0.462673 8_1:+77486895 Msa1215980:three_prime_UTR
AATAGCTAGTCATATCATAA+AGG 0.465357 8_1:+77484430 Msa1215980:CDS
TTCATGTGATCATGTTCCTC+AGG 0.467813 8_1:+77481861 Msa1215980:CDS
GATTGATGATCTCGGCAGAA+TGG 0.467916 8_1:+77486191 Msa1215980:CDS
ATAAAGAGAAGAATCGGGAT+TGG 0.469531 8_1:+77486144 Msa1215980:CDS
TCTGTTTCGATGAGATCGCT+TGG 0.471927 8_1:+77481204 Msa1215980:CDS
ATCAACATACTTGCTCTTGT+CGG 0.473145 8_1:-77482033 None:intergenic
TCCTGCCGATATTCTTCCTC+TGG 0.474302 8_1:+77480977 Msa1215980:CDS
TGAAGGAGGAGCCATGGTCT+TGG 0.475981 8_1:+77483704 Msa1215980:CDS
CGCAGTGGGACCTCGAGACT+TGG 0.476032 8_1:-77482493 None:intergenic
GCAAGCAGCATTTGCCAGAT+GGG 0.480137 8_1:+77483083 Msa1215980:intron
ATAAGATGAGACCAGAAGAT+AGG 0.481347 8_1:+77483760 Msa1215980:CDS
GGTGGGAAAACTGACAAGTT+AGG 0.483332 8_1:-77486698 None:intergenic
ATCTAATGTCAATCTTATTG+TGG 0.484927 8_1:+77486894 Msa1215980:three_prime_UTR
GGCTTCTTGCACATTGTCCT+CGG 0.485618 8_1:-77485930 None:intergenic
AAGCAAGTTCCGTGTCGGCC+AGG 0.487155 8_1:+77481814 Msa1215980:CDS
ACAATAAGCCACGGATCAAT+GGG 0.489065 8_1:-77482008 None:intergenic
CAGAATGTACGAACAAGATA+AGG 0.491874 8_1:+77484173 Msa1215980:CDS
CAGGTGAGAGATTTATCTGT+TGG 0.492731 8_1:-77486003 None:intergenic
CGTCGTCCCATGAGTGTGCT+TGG 0.492954 8_1:-77480755 None:intergenic
AATTACCAGAGGAAGAATAT+CGG 0.493469 8_1:-77480982 None:intergenic
GGAAAAGTGTAGTGGGTGCG+TGG 0.495558 8_1:-77480570 None:intergenic
AGGGCGTTATGATGACCTTA+AGG 0.497343 8_1:+77483974 Msa1215980:CDS
TGCAAGCAGCATTTGCCAGA+TGG 0.508045 8_1:+77483082 Msa1215980:intron
GATATGTAAGAATTGTAAGA+AGG 0.509211 8_1:+77481789 Msa1215980:CDS
ATATGTAAGAATTGTAAGAA+GGG 0.510915 8_1:+77481790 Msa1215980:CDS
TCCATCTACTGCAAAGTCAC+AGG 0.516239 8_1:+77483147 Msa1215980:CDS
ATGGGACAAGGTTCTTCTCC+AGG 0.516636 8_1:-77481990 None:intergenic
TTCAGATAAAGAGAAGAATC+GGG 0.516845 8_1:+77486139 Msa1215980:CDS
AATAACTCGAAGAACTCAAT+CGG 0.517477 8_1:-77486766 None:intergenic
GGCTCAAGATTAACAATCGT+TGG 0.518736 8_1:+77482246 Msa1215980:CDS
ACGATTGTTAATCTTGAGCC+AGG 0.521348 8_1:-77482243 None:intergenic
CACTCATGGGACGACGGCCG+TGG 0.521865 8_1:+77480762 Msa1215980:CDS
GTGGTTGGAGATGGTGGCAT+CGG 0.523372 8_1:-77480793 None:intergenic
AACTCACGATGTAGAAGAGT+TGG 0.523786 8_1:-77482292 None:intergenic
CTGCAATACCAATTACTGTA+AGG 0.524353 8_1:+77484956 Msa1215980:CDS
TTTATTTGGAGGGTCGAGAA+AGG 0.525220 8_1:+77482974 Msa1215980:CDS
GGAAAAGGATCATCAGCTGC+TGG 0.525321 8_1:+77483548 Msa1215980:CDS
AATTGCTGCATCGAGGACTA+AGG 0.527556 8_1:+77481744 Msa1215980:CDS
ACAGCGACCAAGCACACTCA+TGG 0.529247 8_1:+77480748 Msa1215980:CDS
AGAAGACTGATTGATGATCT+CGG 0.532446 8_1:+77486183 Msa1215980:CDS
AGGAAGAAAATTGGCTGAAG+AGG 0.535236 8_1:+77484504 Msa1215980:CDS
GGTCATCATAACGCCCTGAT+GGG 0.536805 8_1:-77483968 None:intergenic
AGGTCATCATAACGCCCTGA+TGG 0.538183 8_1:-77483969 None:intergenic
CTTGTTCAAACTGTAGTGCC+TGG 0.539191 8_1:+77482225 Msa1215980:CDS
GGCAGCTGGAAGCTATTGTA+AGG 0.539565 8_1:+77484977 Msa1215980:CDS
ACAATGTGCAAGAAGCCATA+AGG 0.541102 8_1:+77485936 Msa1215980:CDS
GGAGCCATGGTCTTGGCAGA+TGG 0.545202 8_1:+77483711 Msa1215980:CDS
TTTCTAGGAAGCTCTCCAGT+TGG 0.550986 8_1:-77482177 None:intergenic
ACTATATCCATAGCCAAAGC+AGG 0.554265 8_1:+77483894 Msa1215980:CDS
TCACGATGTAGAAGAGTTGG+AGG 0.555343 8_1:-77482289 None:intergenic
GATATGGAAGATGCTGCTCC+TGG 0.556873 8_1:+77481147 Msa1215980:CDS
TCTTCATTTGTAAACGCAGT+GGG 0.560112 8_1:-77482507 None:intergenic
AGTTAGACAGCCTTATATCA+GGG 0.561967 8_1:+77482443 Msa1215980:CDS
CGACCCTCCAAATAAAAGAC+AGG 0.564378 8_1:-77482967 None:intergenic
TGAATGCCACCCTCGTCTAT+CGG 0.564691 8_1:+77484631 Msa1215980:CDS
ACCAGAGGAAGAATATCGGC+AGG 0.566555 8_1:-77480978 None:intergenic
TTATCTTGAAGGAGGAGCCA+TGG 0.566964 8_1:+77483698 Msa1215980:CDS
TTTGGTGAGTTTGAAGACGA+AGG 0.568540 8_1:+77481107 Msa1215980:CDS
GAACAGGACTCCCGTTTCCA+AGG 0.569413 8_1:+77484484 Msa1215980:CDS
CACGACAAACCTGTATCTCA+CGG 0.571503 8_1:-77486033 None:intergenic
GGATGCCCTTAAATGAAGCT+TGG 0.572015 8_1:-77486745 None:intergenic
AGGGTTGTAGGAATAGAAGA+TGG 0.573206 8_1:+77482462 Msa1215980:CDS
TTCATCAGCTAGTGCAACGA+GGG 0.574875 8_1:+77484457 Msa1215980:CDS
TGGCATCGGTTTCGCCGCCA+CGG 0.575788 8_1:-77480779 None:intergenic
AAGAAGAAGAATAAGAGGGA+GGG 0.579155 8_1:-77480615 None:intergenic
TGTTTCGATGAGATCGCTTG+GGG 0.579790 8_1:+77481206 Msa1215980:CDS
GATTCTTCTTACTTCTAAGG+AGG 0.580034 8_1:+77481179 Msa1215980:CDS
TCATGGGACGACGGCCGTGG+CGG 0.583602 8_1:+77480765 Msa1215980:CDS
GAAAAGTGTAGTGGGTGCGT+GGG 0.585703 8_1:-77480569 None:intergenic
TTTGGCGGGAATGTTGTGGC+GGG 0.587640 8_1:-77480591 None:intergenic
TAGTGGGTGCGTGGGAGCGT+AGG 0.588934 8_1:-77480561 None:intergenic
TGGGAAGAAGAAGAATAAGA+GGG 0.590980 8_1:-77480619 None:intergenic
AGAAGAATCTGAACATCACC+AGG 0.592820 8_1:-77481165 None:intergenic
GAAGAAGAAGAATAAGAGGG+AGG 0.595697 8_1:-77480616 None:intergenic
TAATTATGTGAATATCAGAC+AGG 0.597312 8_1:+77484679 Msa1215980:CDS
AGCAAATGAAACTGGAGAAG+CGG 0.600677 8_1:+77484933 Msa1215980:CDS
CAAGCAGCATTTGCCAGATG+GGG 0.602806 8_1:+77483084 Msa1215980:intron
TCTACATGATACCTAATGGG+TGG 0.604704 8_1:-77486716 None:intergenic
CAGCGACCAAGCACACTCAT+GGG 0.605684 8_1:+77480749 Msa1215980:CDS
AGAAGTCCTTGAATTAAGAA+CGG 0.607422 8_1:-77483925 None:intergenic
GGTTGCCATTCATGAAGCCA+TGG 0.607570 8_1:+77483863 Msa1215980:CDS
CTACATGATACCTAATGGGT+GGG 0.608345 8_1:-77486715 None:intergenic
TTCTTCATTTGTAAACGCAG+TGG 0.608401 8_1:-77482508 None:intergenic
GTCATCATAACGCCCTGATG+GGG 0.610509 8_1:-77483967 None:intergenic
AAAATGTCAGGTTGGGACGA+AGG 0.611384 8_1:+77480714 Msa1215980:exon
CCGTGTCGGCCAGGACTTGG+GGG 0.613588 8_1:+77481823 Msa1215980:CDS
AACCTTGTCCCATTGATCCG+TGG 0.613642 8_1:+77482000 Msa1215980:CDS
TATGTAAGAATTGTAAGAAG+GGG 0.613683 8_1:+77481791 Msa1215980:CDS
GCCATGGTCTTGGCAGATGG+AGG 0.614872 8_1:+77483714 Msa1215980:CDS
ACGACAAACCTGTATCTCAC+GGG 0.614925 8_1:-77486032 None:intergenic
ACCTCCATCTGCCAAGACCA+TGG 0.616041 8_1:-77483715 None:intergenic
GAATATCGGCAGGAGCAGAT+CGG 0.620076 8_1:-77480968 None:intergenic
AATGTTTCTCCAGACTGCAC+AGG 0.622699 8_1:+77484086 Msa1215980:intron
TTGTGGCGGGAAAAGTGTAG+TGG 0.625630 8_1:-77480578 None:intergenic
AGCTGCATCCATTGTAGACA+CGG 0.626896 8_1:-77485966 None:intergenic
TTGAACAAGATGTCGATCAA+CGG 0.632238 8_1:-77482211 None:intergenic
AACCATGTACTCCAAAACCA+TGG 0.632906 8_1:+77486865 Msa1215980:three_prime_UTR
GCTAACATCGAGTCTTACAA+AGG 0.634962 8_1:-77486806 None:intergenic
TCATCATGGCCAAATATAGA+CGG 0.635047 8_1:-77482927 None:intergenic
CAAGCACACTCATGGGACGA+CGG 0.635542 8_1:+77480756 Msa1215980:CDS
TCATCATAACGCCCTGATGG+GGG 0.637899 8_1:-77483966 None:intergenic
TATCGGAAGCTGCAGCAACA+AGG 0.639095 8_1:+77484648 Msa1215980:CDS
CGTGGGAGCGTAGGATATCG+TGG 0.642852 8_1:-77480552 None:intergenic
AGGGGAAGCAAGTTCCGTGT+CGG 0.645373 8_1:+77481809 Msa1215980:CDS
TCTCTGGTGCATGATTAGAA+GGG 0.649766 8_1:-77486629 None:intergenic
TTTGTAGTTTGAAACTGCGG+CGG 0.651828 8_1:+77481077 Msa1215980:intron
TTGTCGGGAACAATAAGCCA+CGG 0.652093 8_1:-77482017 None:intergenic
TATCAATGTGTTACTTCTCG+GGG 0.652386 8_1:+77483123 Msa1215980:CDS
CTAATGTCAATCTTATTGTG+GGG 0.655683 8_1:+77486896 Msa1215980:three_prime_UTR
GGAAATGAAGCCAAGTCTCG+AGG 0.655979 8_1:+77482483 Msa1215980:CDS
GCTGCAGCTTCCGATAGACG+AGG 0.659463 8_1:-77484641 None:intergenic
GGAGTTTAGAAGGAAGATCA+GGG 0.662361 8_1:-77480947 None:intergenic
CAGATCTAATCATGCTACCG+AGG 0.663347 8_1:+77485913 Msa1215980:intron
ATGTCAGGTTGGGACGAAGG+AGG 0.674877 8_1:+77480717 Msa1215980:CDS
CTGCAGCTTCCGATAGACGA+GGG 0.675030 8_1:-77484640 None:intergenic
TGTGGCGGGAAAAGTGTAGT+GGG 0.681312 8_1:-77480577 None:intergenic
CTTGGATTACAGAGGCTGTG+AGG 0.684123 8_1:-77483571 None:intergenic
TTGATGATCTCGGCAGAATG+GGG 0.686544 8_1:+77486193 Msa1215980:CDS
ATTCATCAGCTAGTGCAACG+AGG 0.690555 8_1:+77484456 Msa1215980:CDS
GCTGCTATCTTGGATTACAG+AGG 0.692274 8_1:-77483579 None:intergenic
AGCCACGGATCAATGGGACA+AGG 0.695865 8_1:-77482002 None:intergenic
GGATAACAATTGCTGCATCG+AGG 0.699806 8_1:+77481737 Msa1215980:CDS
TCATCAGCTAGTGCAACGAG+GGG 0.709012 8_1:+77484458 Msa1215980:CDS
CAGCTTCCGATAGACGAGGG+TGG 0.710744 8_1:-77484637 None:intergenic
GGAACATGATCACATGAACG+TGG 0.719167 8_1:-77481856 None:intergenic
GAAGTTGCAAGAAAATCCGG+AGG 0.735071 8_1:+77482067 Msa1215980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTCACAAATTATTAT+TGG + chr8_1:77481373-77481392 Msa1215980:intron 10.0%
!!! ATTTAATTATTTTTAAACCT+AGG + chr8_1:77482763-77482782 Msa1215980:intron 10.0%
!!! TATTTTATTTTTTTCTTCTG+TGG - chr8_1:77480659-77480678 None:intergenic 15.0%
!!! ATTTTTAAACCAACTTTATT+AGG + chr8_1:77482649-77482668 Msa1215980:intron 15.0%
!!! TGGAAAAATAATTACATTTT+TGG - chr8_1:77483323-77483342 None:intergenic 15.0%
!! AAAAAAAAAAAAAAAGAGAG+AGG - chr8_1:77484019-77484038 None:intergenic 15.0%
!!! CTAGATAATTTTTTCAAAAA+AGG - chr8_1:77484261-77484280 None:intergenic 15.0%
!! ATGTAAAATATATTTATGCA+TGG - chr8_1:77484353-77484372 None:intergenic 15.0%
!!! TAAATTTTTTTCACAAGAAA+AGG - chr8_1:77484898-77484917 None:intergenic 15.0%
!!! TTTTCTTGTGAAAAAAATTT+AGG + chr8_1:77484897-77484916 Msa1215980:intron 15.0%
!! TTAAAAAAAGACTTGTAAAA+AGG + chr8_1:77485577-77485596 Msa1215980:intron 15.0%
!! TAAAAAAAGACTTGTAAAAA+GGG + chr8_1:77485578-77485597 Msa1215980:intron 15.0%
!!! TTTTGTATATCTATATCAAT+TGG + chr8_1:77485663-77485682 Msa1215980:intron 15.0%
!!! TAAAAGATACACATTTTAAA+CGG + chr8_1:77486314-77486333 Msa1215980:intron 15.0%
!! TATAATTCAAGAGAAAAAAA+AGG - chr8_1:77486510-77486529 None:intergenic 15.0%
!!! TTTTTTTAGATCTCTGATTT+GGG - chr8_1:77480697-77480716 None:intergenic 20.0%
!!! TTTTTTTTAGATCTCTGATT+TGG - chr8_1:77480698-77480717 None:intergenic 20.0%
!!! CTTATTTAATTTTGAGCATT+TGG + chr8_1:77481596-77481615 Msa1215980:intron 20.0%
!!! TATCTTTTTATCATTTTCGT+AGG + chr8_1:77481681-77481700 Msa1215980:intron 20.0%
!! ATATGTAAGAATTGTAAGAA+GGG + chr8_1:77481790-77481809 Msa1215980:CDS 20.0%
!! TATACATTTGATATGACAAA+AGG + chr8_1:77482096-77482115 Msa1215980:intron 20.0%
!!! GTTTAAAAATTTAGTTTCAC+GGG - chr8_1:77482639-77482658 None:intergenic 20.0%
!!! GGTTTAAAAATTTAGTTTCA+CGG - chr8_1:77482640-77482659 None:intergenic 20.0%
!! AATCTAAGCATTATTATATG+TGG - chr8_1:77483346-77483365 None:intergenic 20.0%
!!! TCTATTTTTACAATTTAGCT+TGG + chr8_1:77483396-77483415 Msa1215980:intron 20.0%
!!! TGAAAAAAATTTAGGATATG+AGG + chr8_1:77484905-77484924 Msa1215980:intron 20.0%
!! AAAGAAAGACATTGAAATTA+GGG - chr8_1:77485457-77485476 None:intergenic 20.0%
!! AAAAGAAAGACATTGAAATT+AGG - chr8_1:77485458-77485477 None:intergenic 20.0%
!! GAAAAAATGTCTTATATTCA+TGG + chr8_1:77485613-77485632 Msa1215980:intron 20.0%
!! GTTCAATAATTCAATAGTTA+TGG + chr8_1:77485685-77485704 Msa1215980:intron 20.0%
!!! TTTTAAAAGTTTGAACCAAA+TGG - chr8_1:77486299-77486318 None:intergenic 20.0%
!!! AAAAGATACACATTTTAAAC+GGG + chr8_1:77486315-77486334 Msa1215980:intron 20.0%
!!! TTCTGTAGTCTAAATATTTT+TGG - chr8_1:77486399-77486418 None:intergenic 20.0%
!!! ATATATACATGTAAGCTTTT+GGG - chr8_1:77486560-77486579 None:intergenic 20.0%
!!! AATATATACATGTAAGCTTT+TGG - chr8_1:77486561-77486580 None:intergenic 20.0%
!! TTCATATATAACAACATTTC+AGG + chr8_1:77486597-77486616 Msa1215980:intron 20.0%
!!! TTTTTTTCTTCTGTGGTTTT+GGG - chr8_1:77480652-77480671 None:intergenic 25.0%
!!! ATTTTTTTCTTCTGTGGTTT+TGG - chr8_1:77480653-77480672 None:intergenic 25.0%
!!! TTTTTTAGATCTCTGATTTG+GGG - chr8_1:77480696-77480715 None:intergenic 25.0%
! AGAGATCTAAAAAAAATGTC+AGG + chr8_1:77480702-77480721 Msa1215980:exon 25.0%
! ATCTAAAAAAAATGTCAGGT+TGG + chr8_1:77480706-77480725 Msa1215980:exon 25.0%
! TCTAAAAAAAATGTCAGGTT+GGG + chr8_1:77480707-77480726 Msa1215980:exon 25.0%
!!! TGAATTCTTTGAATTTTTGG+AGG - chr8_1:77480824-77480843 None:intergenic 25.0%
!! GGATGAATTCTTTGAATTTT+TGG - chr8_1:77480827-77480846 None:intergenic 25.0%
! ATATCAACGAGAAGATATTT+GGG - chr8_1:77480906-77480925 None:intergenic 25.0%
! AAATCAACAAATTCATCAAC+TGG - chr8_1:77481029-77481048 None:intergenic 25.0%
!!! TTTTTTGTAGTTTGAAACTG+CGG + chr8_1:77481074-77481093 Msa1215980:intron 25.0%
! TTGTGTTTATGAAGTTGTTT+AGG + chr8_1:77481249-77481268 Msa1215980:intron 25.0%
! TGTGTTTATGAAGTTGTTTA+GGG + chr8_1:77481250-77481269 Msa1215980:intron 25.0%
! CAGATATCAAATATCTCAAT+TGG - chr8_1:77481286-77481305 None:intergenic 25.0%
! CTTACAATTCTTACATATCA+AGG - chr8_1:77481788-77481807 None:intergenic 25.0%
! GATATGTAAGAATTGTAAGA+AGG + chr8_1:77481789-77481808 Msa1215980:CDS 25.0%
! TATGTAAGAATTGTAAGAAG+GGG + chr8_1:77481791-77481810 Msa1215980:CDS 25.0%
!!! TTCTTTATTTTGCGTTTTTG+AGG + chr8_1:77481931-77481950 Msa1215980:intron 25.0%
!! TGGAATCTATAGTATTTTTC+AGG + chr8_1:77482266-77482285 Msa1215980:CDS 25.0%
!! TGAATACTCATGTATTTTGT+TGG + chr8_1:77483011-77483030 Msa1215980:intron 25.0%
! AAATATCCAAACTTTCAACA+TGG + chr8_1:77483034-77483053 Msa1215980:intron 25.0%
!!! TTTGCATTTTTCCTTTAGAA+TGG + chr8_1:77483241-77483260 Msa1215980:intron 25.0%
!!! ATTTTTACAATTTAGCTTGG+CGG + chr8_1:77483399-77483418 Msa1215980:intron 25.0%
!! CTTTGGTAATTTATCATTGT+TGG + chr8_1:77483806-77483825 Msa1215980:intron 25.0%
!! TTTCACTGTATCTTTTATGT+AGG + chr8_1:77483841-77483860 Msa1215980:intron 25.0%
!! TTCACTGTATCTTTTATGTA+GGG + chr8_1:77483842-77483861 Msa1215980:intron 25.0%
! AAAAAAAAAAAGAGAGAGGA+GGG - chr8_1:77484015-77484034 None:intergenic 25.0%
! AAAAAAAAAAAAGAGAGAGG+AGG - chr8_1:77484016-77484035 None:intergenic 25.0%
! AATAGCTAGTCATATCATAA+AGG + chr8_1:77484430-77484449 Msa1215980:CDS 25.0%
! CTTTGAGCTGTTATATAAAT+AGG + chr8_1:77484588-77484607 Msa1215980:intron 25.0%
! TAATTATGTGAATATCAGAC+AGG + chr8_1:77484679-77484698 Msa1215980:CDS 25.0%
! ATGACATCCAACAATAAAAA+AGG - chr8_1:77484808-77484827 None:intergenic 25.0%
! TTTATTAGTTCAGCATTCAA+AGG - chr8_1:77484847-77484866 None:intergenic 25.0%
!! AAAAAATTTAGGATATGAGG+CGG + chr8_1:77484908-77484927 Msa1215980:intron 25.0%
!! AATTTTTATGAAAATGCACC+AGG - chr8_1:77485078-77485097 None:intergenic 25.0%
! AGATAAGTAATGTAAGTATG+AGG - chr8_1:77485208-77485227 None:intergenic 25.0%
! TGATAAGGTCATAATGAAAT+CGG - chr8_1:77485279-77485298 None:intergenic 25.0%
!! ATAACTCATATAACTTGTCA+TGG + chr8_1:77485314-77485333 Msa1215980:intron 25.0%
!! ATAACTCATATAACTTGTCA+TGG + chr8_1:77485314-77485333 Msa1215980:intron 25.0%
!!! TTCTTTTTTCTTGTGAAGAT+TGG - chr8_1:77485494-77485513 None:intergenic 25.0%
!! CCTTAAAAGCTTATGTTTTT+GGG + chr8_1:77485719-77485738 Msa1215980:intron 25.0%
!! ATTAAGGATTTTACATGCAA+TGG - chr8_1:77485758-77485777 None:intergenic 25.0%
! TCTTTAAGCAATGCATATTA+AGG - chr8_1:77485774-77485793 None:intergenic 25.0%
! GCATTATGACAAAAAAATCA+TGG - chr8_1:77485872-77485891 None:intergenic 25.0%
!! AAAGATACACATTTTAAACG+GGG + chr8_1:77486316-77486335 Msa1215980:intron 25.0%
! ATCTAATGTCAATCTTATTG+TGG + chr8_1:77486894-77486913 Msa1215980:three_prime_UTR 25.0%
! TCTAATGTCAATCTTATTGT+GGG + chr8_1:77486895-77486914 Msa1215980:three_prime_UTR 25.0%
!!! TTTTTTCTTCTGTGGTTTTG+GGG - chr8_1:77480651-77480670 None:intergenic 30.0%
!! TTCTTTGAATTTTTGGAGGA+TGG - chr8_1:77480820-77480839 None:intergenic 30.0%
CATATCAACGAGAAGATATT+TGG - chr8_1:77480907-77480926 None:intergenic 30.0%
CAAATATCTTCTCGTTGATA+TGG + chr8_1:77480905-77480924 Msa1215980:CDS 30.0%
AATTACCAGAGGAAGAATAT+CGG - chr8_1:77480985-77481004 None:intergenic 30.0%
AGTTTAGAAGAAATTACCAG+AGG - chr8_1:77480996-77481015 None:intergenic 30.0%
TCAGATTCTTCTTACTTCTA+AGG + chr8_1:77481176-77481195 Msa1215980:CDS 30.0%
! CACACTTCAATTAAAAGTGT+CGG - chr8_1:77481314-77481333 None:intergenic 30.0%
!! ACTTTTAATTGAAGTGTGAC+CGG + chr8_1:77481316-77481335 Msa1215980:intron 30.0%
ATTATTGAAACTCAAGTGCT+TGG + chr8_1:77481466-77481485 Msa1215980:intron 30.0%
TTATTGAAACTCAAGTGCTT+GGG + chr8_1:77481467-77481486 Msa1215980:intron 30.0%
! AGCATAATCAACTTGTTTCA+TGG - chr8_1:77481519-77481538 None:intergenic 30.0%
TTGTCTTTCTTTCAAGAGAT+TGG + chr8_1:77481632-77481651 Msa1215980:intron 30.0%
TCAAGAGATTGGTATATTTG+AGG + chr8_1:77481643-77481662 Msa1215980:intron 30.0%
GATGTCTCTTACATGATAAA+AGG + chr8_1:77481953-77481972 Msa1215980:intron 30.0%
!!! AAGGTTTTTTTTTTGTAGCC+TGG + chr8_1:77481972-77481991 Msa1215980:intron 30.0%
CAAATGTATATTACTACCTC+CGG - chr8_1:77482086-77482105 None:intergenic 30.0%
TAATCATGACATCTTTATGC+TGG + chr8_1:77482139-77482158 Msa1215980:intron 30.0%
TATTGACATCAACTGTAGAT+TGG - chr8_1:77482380-77482399 None:intergenic 30.0%
! CAAAGTAGTCAATTGATAGT+TGG - chr8_1:77482545-77482564 None:intergenic 30.0%
TACTTTGCTTTATACCTTGT+TGG + chr8_1:77482558-77482577 Msa1215980:intron 30.0%
CTAAAACGTGATATTAAAGG+AGG - chr8_1:77482587-77482606 None:intergenic 30.0%
CAGCTAAAACGTGATATTAA+AGG - chr8_1:77482590-77482609 None:intergenic 30.0%
CACTGATAACCTAATAAAGT+TGG - chr8_1:77482661-77482680 None:intergenic 30.0%
TAGAACTGAGAAATCATAGA+CGG - chr8_1:77482721-77482740 None:intergenic 30.0%
!! GATATCAATGTGTTACTTCT+CGG + chr8_1:77483121-77483140 Msa1215980:CDS 30.0%
!! ATATCAATGTGTTACTTCTC+GGG + chr8_1:77483122-77483141 Msa1215980:CDS 30.0%
! TTTGCAATTTTCCTTTAGAC+TGG + chr8_1:77483177-77483196 Msa1215980:intron 30.0%
TAACTAAAGAACCAGTCTAA+AGG - chr8_1:77483191-77483210 None:intergenic 30.0%
!! TTTCCTTTAGAATGGTTCTT+TGG + chr8_1:77483249-77483268 Msa1215980:intron 30.0%
TAACCAAAGAACCATTCTAA+AGG - chr8_1:77483255-77483274 None:intergenic 30.0%
CTAAGCATTATTATATGTGG+TGG - chr8_1:77483343-77483362 None:intergenic 30.0%
GCAAACAATGCATTAAGTAA+AGG - chr8_1:77483614-77483633 None:intergenic 30.0%
ACTTAATGCATTGTTTGCAT+TGG + chr8_1:77483616-77483635 Msa1215980:intron 30.0%
AACCATTTCTTGTTACTCTT+TGG + chr8_1:77483789-77483808 Msa1215980:intron 30.0%
TACCAAAGAGTAACAAGAAA+TGG - chr8_1:77483794-77483813 None:intergenic 30.0%
TAACAACCGTTCTTAATTCA+AGG + chr8_1:77483919-77483938 Msa1215980:CDS 30.0%
AGAAGTCCTTGAATTAAGAA+CGG - chr8_1:77483928-77483947 None:intergenic 30.0%
ATATATAGCAGTTGACCTTA+AGG - chr8_1:77483992-77484011 None:intergenic 30.0%
TACAGACAACTATTCTTTCT+AGG + chr8_1:77484121-77484140 Msa1215980:CDS 30.0%
!! TTAGTAGTTGATGATGATGT+TGG + chr8_1:77484766-77484785 Msa1215980:intron 30.0%
ATAAAAAAGGCAAAACCGAT+CGG - chr8_1:77484795-77484814 None:intergenic 30.0%
!! GGTTTTGCCTTTTTTATTGT+TGG + chr8_1:77484798-77484817 Msa1215980:intron 30.0%
! TATCGCTGTTATTCTTTTCT+GGG + chr8_1:77485034-77485053 Msa1215980:intron 30.0%
CACAGACTGATATAGATTAT+AGG + chr8_1:77485104-77485123 Msa1215980:intron 30.0%
AGACTGATATAGATTATAGG+AGG + chr8_1:77485107-77485126 Msa1215980:intron 30.0%
GTCACATAGTCTGATTAATA+TGG + chr8_1:77485132-77485151 Msa1215980:intron 30.0%
TGAGTTATCCATGAATTAGT+CGG - chr8_1:77485359-77485378 None:intergenic 30.0%
AATAATTACAAGGGCAATCT+TGG - chr8_1:77485430-77485449 None:intergenic 30.0%
TAGGGTGACAATAATTACAA+GGG - chr8_1:77485439-77485458 None:intergenic 30.0%
TTAGGGTGACAATAATTACA+AGG - chr8_1:77485440-77485459 None:intergenic 30.0%
! GCCTTAAAAGCTTATGTTTT+TGG + chr8_1:77485718-77485737 Msa1215980:intron 30.0%
! CCCAAAAACATAAGCTTTTA+AGG - chr8_1:77485722-77485741 None:intergenic 30.0%
CTGGTAAGAGTTAATTAAAG+AGG - chr8_1:77485896-77485915 None:intergenic 30.0%
! TTCTCTTTTTCCTTCCATAT+AGG + chr8_1:77486068-77486087 Msa1215980:intron 30.0%
ATCAGCATATGAAACCTATA+TGG - chr8_1:77486085-77486104 None:intergenic 30.0%
GTTCAGATAAAGAGAAGAAT+CGG + chr8_1:77486138-77486157 Msa1215980:CDS 30.0%
TTCAGATAAAGAGAAGAATC+GGG + chr8_1:77486139-77486158 Msa1215980:CDS 30.0%
! ATTTTAAACGGGGTTATGTT+GGG + chr8_1:77486326-77486345 Msa1215980:intron 30.0%
!!! AACAGTTTTGAACAGTGTTA+CGG - chr8_1:77486464-77486483 None:intergenic 30.0%
TCTTCTACATGATACCTAAT+GGG - chr8_1:77486722-77486741 None:intergenic 30.0%
TTCTTCTACATGATACCTAA+TGG - chr8_1:77486723-77486742 None:intergenic 30.0%
AATAACTCGAAGAACTCAAT+CGG - chr8_1:77486769-77486788 None:intergenic 30.0%
! TGAGTTCTTCGAGTTATTTA+AGG + chr8_1:77486771-77486790 Msa1215980:three_prime_UTR 30.0%
! TAGATTCTTTTCCATGGTTT+TGG - chr8_1:77486879-77486898 None:intergenic 30.0%
! TGACATTAGATTCTTTTCCA+TGG - chr8_1:77486885-77486904 None:intergenic 30.0%
CTAATGTCAATCTTATTGTG+GGG + chr8_1:77486896-77486915 Msa1215980:three_prime_UTR 30.0%
AAGAAGAAGAATAAGAGGGA+GGG - chr8_1:77480618-77480637 None:intergenic 35.0%
TGGGAAGAAGAAGAATAAGA+GGG - chr8_1:77480622-77480641 None:intergenic 35.0%
ATGGGAAGAAGAAGAATAAG+AGG - chr8_1:77480623-77480642 None:intergenic 35.0%
!! TTCATCCGTAACTTTGAAAC+CGG + chr8_1:77480840-77480859 Msa1215980:CDS 35.0%
!! TGTTACCGGTTTCAAAGTTA+CGG - chr8_1:77480848-77480867 None:intergenic 35.0%
GTAAGGAAAGACATTGTTAC+CGG - chr8_1:77480862-77480881 None:intergenic 35.0%
! GATATTTGGGATTGTGAAGA+AGG - chr8_1:77480893-77480912 None:intergenic 35.0%
! GATTCTTCTTACTTCTAAGG+AGG + chr8_1:77481179-77481198 Msa1215980:CDS 35.0%
!! ACTTCAATTAAAAGTGTCGG+TGG - chr8_1:77481311-77481330 None:intergenic 35.0%
TATTGAAACTCAAGTGCTTG+GGG + chr8_1:77481468-77481487 Msa1215980:intron 35.0%
! AGATATTTGCTAGTTGCAAC+AGG + chr8_1:77481562-77481581 Msa1215980:intron 35.0%
!! TCGAAGCTTGTTAAAATTGC+TGG + chr8_1:77481715-77481734 Msa1215980:CDS 35.0%
!! CGAAGCTTGTTAAAATTGCT+GGG + chr8_1:77481716-77481735 Msa1215980:CDS 35.0%
!!! GTCTTTTGCTTATTTTGCAG+TGG + chr8_1:77481897-77481916 Msa1215980:intron 35.0%
ATCAACATACTTGCTCTTGT+CGG - chr8_1:77482036-77482055 None:intergenic 35.0%
CTTGAAGTTGCAAGAAAATC+CGG + chr8_1:77482064-77482083 Msa1215980:CDS 35.0%
!!! ATCTTTATGCTGGCTTTTGA+AGG + chr8_1:77482149-77482168 Msa1215980:intron 35.0%
TTGAACAAGATGTCGATCAA+CGG - chr8_1:77482214-77482233 None:intergenic 35.0%
! TGTGTTTTATGCAGCAACAA+AGG + chr8_1:77482411-77482430 Msa1215980:intron 35.0%
! AGTTAGACAGCCTTATATCA+GGG + chr8_1:77482443-77482462 Msa1215980:CDS 35.0%
ATTCCTACAACCCTGATATA+AGG - chr8_1:77482456-77482475 None:intergenic 35.0%
TCTTCATTTGTAAACGCAGT+GGG - chr8_1:77482510-77482529 None:intergenic 35.0%
TTCTTCATTTGTAAACGCAG+TGG - chr8_1:77482511-77482530 None:intergenic 35.0%
GTGAATGTTAACAGTGTTTG+TGG + chr8_1:77482611-77482630 Msa1215980:intron 35.0%
! AGACGGTATCTAGTATTGAA+AGG - chr8_1:77482704-77482723 None:intergenic 35.0%
TAGGAATGAAAATTCAGCCT+AGG - chr8_1:77482783-77482802 None:intergenic 35.0%
GATGAGGAATATGTAACAGT+AGG - chr8_1:77482802-77482821 None:intergenic 35.0%
AAGATACCATTATTAGCACC+AGG - chr8_1:77482835-77482854 None:intergenic 35.0%
AAATATAGACGGAGCAATCT+TGG - chr8_1:77482919-77482938 None:intergenic 35.0%
AAGATTGCTCCGTCTATATT+TGG + chr8_1:77482918-77482937 Msa1215980:CDS 35.0%
TCATCATGGCCAAATATAGA+CGG - chr8_1:77482930-77482949 None:intergenic 35.0%
! TAGCCTTTTTGACATCATCA+TGG - chr8_1:77482944-77482963 None:intergenic 35.0%
! TGATGATGTCAAAAAGGCTA+TGG + chr8_1:77482944-77482963 Msa1215980:CDS 35.0%
!! TATCAATGTGTTACTTCTCG+GGG + chr8_1:77483123-77483142 Msa1215980:CDS 35.0%
!! TTAAAAACAAGTGCCACTTG+TGG + chr8_1:77483294-77483313 Msa1215980:intron 35.0%
!! ACATTTTTGGATACCACAAG+TGG - chr8_1:77483310-77483329 None:intergenic 35.0%
CTACGATGCGAATGAAATAA+TGG - chr8_1:77483440-77483459 None:intergenic 35.0%
AACTGTAAAATGTAACCGTC+AGG - chr8_1:77483482-77483501 None:intergenic 35.0%
! CCAGAAGTATAAACAGCAAT+AGG - chr8_1:77483530-77483549 None:intergenic 35.0%
!! CCTATTGCTGTTTATACTTC+TGG + chr8_1:77483527-77483546 Msa1215980:CDS 35.0%
! GCTGTTTATACTTCTGGAAA+AGG + chr8_1:77483533-77483552 Msa1215980:CDS 35.0%
ATAAGATGAGACCAGAAGAT+AGG + chr8_1:77483760-77483779 Msa1215980:CDS 35.0%
CAGAATGTACGAACAAGATA+AGG + chr8_1:77484173-77484192 Msa1215980:CDS 35.0%
!!! TTCGATAGTTTTCAAGTCAG+TGG + chr8_1:77484384-77484403 Msa1215980:intron 35.0%
! CAATTTTCTTCCTTGGAAAC+GGG - chr8_1:77484497-77484516 None:intergenic 35.0%
! CCAATTTTCTTCCTTGGAAA+CGG - chr8_1:77484498-77484517 None:intergenic 35.0%
CTAATAACCATATCGAGACT+AGG - chr8_1:77484750-77484769 None:intergenic 35.0%
CTGCAATACCAATTACTGTA+AGG + chr8_1:77484956-77484975 Msa1215980:CDS 35.0%
! GTATCGCTGTTATTCTTTTC+TGG + chr8_1:77485033-77485052 Msa1215980:intron 35.0%
! TTTTATGAAAATGCACCAGG+AGG - chr8_1:77485075-77485094 None:intergenic 35.0%
ATGTGTCTCAATGTACAGTA+AGG - chr8_1:77485184-77485203 None:intergenic 35.0%
CCATGAATTCAGATGTGATA+AGG - chr8_1:77485294-77485313 None:intergenic 35.0%
CCTTATCACATCTGAATTCA+TGG + chr8_1:77485291-77485310 Msa1215980:intron 35.0%
! CAAATATGCCGACTAATTCA+TGG + chr8_1:77485348-77485367 Msa1215980:intron 35.0%
GATAAATCTCTCACCTGAAA+TGG + chr8_1:77486009-77486028 Msa1215980:CDS 35.0%
GCATATGAAACCTATATGGA+AGG - chr8_1:77486081-77486100 None:intergenic 35.0%
ATAAAGAGAAGAATCGGGAT+TGG + chr8_1:77486144-77486163 Msa1215980:CDS 35.0%
TAAAGAGAAGAATCGGGATT+GGG + chr8_1:77486145-77486164 Msa1215980:CDS 35.0%
TCAGTCTTCTTTCTGATATG+TGG - chr8_1:77486173-77486192 None:intergenic 35.0%
! AGAAGACTGATTGATGATCT+CGG + chr8_1:77486183-77486202 Msa1215980:CDS 35.0%
! CATTTTAAACGGGGTTATGT+TGG + chr8_1:77486325-77486344 Msa1215980:intron 35.0%
AGAATGCCAAGCTTCATTTA+AGG + chr8_1:77486739-77486758 Msa1215980:three_prime_UTR 35.0%
GAATGCCAAGCTTCATTTAA+GGG + chr8_1:77486740-77486759 Msa1215980:three_prime_UTR 35.0%
! AAGAATAAGAGGGAGGGTTT+TGG - chr8_1:77480612-77480631 None:intergenic 40.0%
GAAGAAGAAGAATAAGAGGG+AGG - chr8_1:77480619-77480638 None:intergenic 40.0%
!!! TGTGGTTTTGGGGAAGAAAT+GGG - chr8_1:77480641-77480660 None:intergenic 40.0%
!! AGATCTCTGATTTGGGGTTA+GGG - chr8_1:77480690-77480709 None:intergenic 40.0%
!! TAGATCTCTGATTTGGGGTT+AGG - chr8_1:77480691-77480710 None:intergenic 40.0%
!! TGAATTTTTGGAGGATGGTG+TGG - chr8_1:77480815-77480834 None:intergenic 40.0%
TGAAGAAGGCTTTCTCTGTA+AGG - chr8_1:77480879-77480898 None:intergenic 40.0%
GGAGTTTAGAAGGAAGATCA+GGG - chr8_1:77480950-77480969 None:intergenic 40.0%
! TTTGTAGTTTGAAACTGCGG+CGG + chr8_1:77481077-77481096 Msa1215980:intron 40.0%
TTTGGTGAGTTTGAAGACGA+AGG + chr8_1:77481107-77481126 Msa1215980:CDS 40.0%
AGAAGAATCTGAACATCACC+AGG - chr8_1:77481168-77481187 None:intergenic 40.0%
ATGAAGTTGTTTAGGGAGCT+AGG + chr8_1:77481257-77481276 Msa1215980:intron 40.0%
TGAAGTTGTTTAGGGAGCTA+GGG + chr8_1:77481258-77481277 Msa1215980:intron 40.0%
TTTGTCTTGTGTCCATGTGT+GGG + chr8_1:77481404-77481423 Msa1215980:intron 40.0%
AATACTATGAAGCCCACACA+TGG - chr8_1:77481419-77481438 None:intergenic 40.0%
TTCATGTGATCATGTTCCTC+AGG + chr8_1:77481861-77481880 Msa1215980:CDS 40.0%
ACAATAAGCCACGGATCAAT+GGG - chr8_1:77482011-77482030 None:intergenic 40.0%
AACAATAAGCCACGGATCAA+TGG - chr8_1:77482012-77482031 None:intergenic 40.0%
TCAACATACTTGCTCTTGTC+GGG - chr8_1:77482035-77482054 None:intergenic 40.0%
! CGGATTTTCTTGCAACTTCA+AGG - chr8_1:77482066-77482085 None:intergenic 40.0%
ACGGATAGAAGCAAGTTTCT+AGG - chr8_1:77482195-77482214 None:intergenic 40.0%
ACGATTGTTAATCTTGAGCC+AGG - chr8_1:77482246-77482265 None:intergenic 40.0%
GGCTCAAGATTAACAATCGT+TGG + chr8_1:77482246-77482265 Msa1215980:CDS 40.0%
AACTCACGATGTAGAAGAGT+TGG - chr8_1:77482295-77482314 None:intergenic 40.0%
! CAGTTAGACAGCCTTATATC+AGG + chr8_1:77482442-77482461 Msa1215980:CDS 40.0%
AGGGTTGTAGGAATAGAAGA+TGG + chr8_1:77482462-77482481 Msa1215980:CDS 40.0%
! GATGTTCCTGGTGCTAATAA+TGG + chr8_1:77482826-77482845 Msa1215980:intron 40.0%
! TGGCCATGATGATGTCAAAA+AGG + chr8_1:77482938-77482957 Msa1215980:CDS 40.0%
! GCTATGGCCTGTCTTTTATT+TGG + chr8_1:77482960-77482979 Msa1215980:CDS 40.0%
!! ATGGCCTGTCTTTTATTTGG+AGG + chr8_1:77482963-77482982 Msa1215980:CDS 40.0%
!! TGGCCTGTCTTTTATTTGGA+GGG + chr8_1:77482964-77482983 Msa1215980:CDS 40.0%
TTTATTTGGAGGGTCGAGAA+AGG + chr8_1:77482974-77482993 Msa1215980:CDS 40.0%
ATTCTCAATCAAGATACGCG+AGG - chr8_1:77483642-77483661 None:intergenic 40.0%
TGGTTTACACACCTATCTTC+TGG - chr8_1:77483774-77483793 None:intergenic 40.0%
!! GGATATAGTTTGCTGTTCCA+TGG - chr8_1:77483883-77483902 None:intergenic 40.0%
ACTATATCCATAGCCAAAGC+AGG + chr8_1:77483894-77483913 Msa1215980:CDS 40.0%
TGTTATTCCTGCTTTGGCTA+TGG - chr8_1:77483904-77483923 None:intergenic 40.0%
! AACGGTTGTTATTCCTGCTT+TGG - chr8_1:77483910-77483929 None:intergenic 40.0%
!! TGCCTCTTGATTTGTGTGTT+TGG + chr8_1:77484304-77484323 Msa1215980:intron 40.0%
TGCCAAACACACAAATCAAG+AGG - chr8_1:77484309-77484328 None:intergenic 40.0%
! AGTCAGTGGTTGACGTATTT+TGG + chr8_1:77484398-77484417 Msa1215980:intron 40.0%
CCGTTTCCAAGGAAGAAAAT+TGG + chr8_1:77484495-77484514 Msa1215980:CDS 40.0%
! CTTCAGCCAATTTTCTTCCT+TGG - chr8_1:77484504-77484523 None:intergenic 40.0%
AGGAAGAAAATTGGCTGAAG+AGG + chr8_1:77484504-77484523 Msa1215980:CDS 40.0%
! ATGTTAGCCTAGTCTCGATA+TGG + chr8_1:77484740-77484759 Msa1215980:intron 40.0%
AGCAAATGAAACTGGAGAAG+CGG + chr8_1:77484933-77484952 Msa1215980:CDS 40.0%
! TTGTCCTTTTCATGCGTAAG+AGG + chr8_1:77485517-77485536 Msa1215980:intron 40.0%
CTATCCTCTTACGCATGAAA+AGG - chr8_1:77485524-77485543 None:intergenic 40.0%
ACCAACAAAAGAGCGGAAAA+AGG - chr8_1:77485849-77485868 None:intergenic 40.0%
ATCATGGACCAACAAAAGAG+CGG - chr8_1:77485856-77485875 None:intergenic 40.0%
ACAATGTGCAAGAAGCCATA+AGG + chr8_1:77485936-77485955 Msa1215980:CDS 40.0%
CAGGTGAGAGATTTATCTGT+TGG - chr8_1:77486006-77486025 None:intergenic 40.0%
! ATTGATGATCTCGGCAGAAT+GGG + chr8_1:77486192-77486211 Msa1215980:CDS 40.0%
TGACTTTCTTCTCAGCTAAG+TGG - chr8_1:77486249-77486268 None:intergenic 40.0%
CAAATGGCGTCATCAAATTC+TGG - chr8_1:77486283-77486302 None:intergenic 40.0%
!! CAGAATTTGATGACGCCATT+TGG + chr8_1:77486281-77486300 Msa1215980:intron 40.0%
GGTGTTTGTGTGCTTATGAT+GGG - chr8_1:77486378-77486397 None:intergenic 40.0%
TGGTGTTTGTGTGCTTATGA+TGG - chr8_1:77486379-77486398 None:intergenic 40.0%
TCACATTGTTGCAGTGACAA+AGG + chr8_1:77486426-77486445 Msa1215980:intron 40.0%
CACATTGTTGCAGTGACAAA+GGG + chr8_1:77486427-77486446 Msa1215980:intron 40.0%
ACATTGTTGCAGTGACAAAG+GGG + chr8_1:77486428-77486447 Msa1215980:intron 40.0%
TCTCTGGTGCATGATTAGAA+GGG - chr8_1:77486632-77486651 None:intergenic 40.0%
AAGTAGAGTACAAGCGAGAA+AGG + chr8_1:77486656-77486675 Msa1215980:CDS 40.0%
! GAGAAAGGCGTGTTGTATTT+CGG + chr8_1:77486671-77486690 Msa1215980:CDS 40.0%
! CTACATGATACCTAATGGGT+GGG - chr8_1:77486718-77486737 None:intergenic 40.0%
TCTACATGATACCTAATGGG+TGG - chr8_1:77486719-77486738 None:intergenic 40.0%
GCTAACATCGAGTCTTACAA+AGG - chr8_1:77486809-77486828 None:intergenic 40.0%
AACCATGTACTCCAAAACCA+TGG + chr8_1:77486865-77486884 Msa1215980:three_prime_UTR 40.0%
!!! TTCCATGGTTTTGGAGTACA+TGG - chr8_1:77486870-77486889 None:intergenic 40.0%
!! AATAAGAGGGAGGGTTTTGG+CGG - chr8_1:77480609-77480628 None:intergenic 45.0%
!!! CTGTGGTTTTGGGGAAGAAA+TGG - chr8_1:77480642-77480661 None:intergenic 45.0%
!! CTGATTTGGGGTTAGGGTTT+CGG - chr8_1:77480684-77480703 None:intergenic 45.0%
!! AAAATGTCAGGTTGGGACGA+AGG + chr8_1:77480714-77480733 Msa1215980:exon 45.0%
!! TTTTTGGAGGATGGTGTGGT+TGG - chr8_1:77480811-77480830 None:intergenic 45.0%
CGGAGTTTAGAAGGAAGATC+AGG - chr8_1:77480951-77480970 None:intergenic 45.0%
AGTTTGAAGACGAAGGTTGC+TGG + chr8_1:77481114-77481133 Msa1215980:CDS 45.0%
TGCTGGAGATACTGGTGATA+TGG + chr8_1:77481131-77481150 Msa1215980:CDS 45.0%
TCTGTTTCGATGAGATCGCT+TGG + chr8_1:77481204-77481223 Msa1215980:CDS 45.0%
CTGTTTCGATGAGATCGCTT+GGG + chr8_1:77481205-77481224 Msa1215980:CDS 45.0%
TGTTTCGATGAGATCGCTTG+GGG + chr8_1:77481206-77481225 Msa1215980:CDS 45.0%
GTTTGTCTTGTGTCCATGTG+TGG + chr8_1:77481403-77481422 Msa1215980:intron 45.0%
!! ATGCTGACTCTCGAATGCTT+AGG + chr8_1:77481534-77481553 Msa1215980:intron 45.0%
GGATAACAATTGCTGCATCG+AGG + chr8_1:77481737-77481756 Msa1215980:CDS 45.0%
AATTGCTGCATCGAGGACTA+AGG + chr8_1:77481744-77481763 Msa1215980:CDS 45.0%
GGAACATGATCACATGAACG+TGG - chr8_1:77481859-77481878 None:intergenic 45.0%
GACAGCACAAACTAAACCTG+AGG - chr8_1:77481880-77481899 None:intergenic 45.0%
TTGTCGGGAACAATAAGCCA+CGG - chr8_1:77482020-77482039 None:intergenic 45.0%
GAAGTTGCAAGAAAATCCGG+AGG + chr8_1:77482067-77482086 Msa1215980:CDS 45.0%
!! CTTTTGAAGGACGTTCCAAC+TGG + chr8_1:77482162-77482181 Msa1215980:intron 45.0%
! TTTCTAGGAAGCTCTCCAGT+TGG - chr8_1:77482180-77482199 None:intergenic 45.0%
CTTGTTCAAACTGTAGTGCC+TGG + chr8_1:77482225-77482244 Msa1215980:CDS 45.0%
TCACGATGTAGAAGAGTTGG+AGG - chr8_1:77482292-77482311 None:intergenic 45.0%
! CAGCCTTATATCAGGGTTGT+AGG + chr8_1:77482450-77482469 Msa1215980:CDS 45.0%
ATTAAAGGAGGCAGCCAACA+AGG - chr8_1:77482575-77482594 None:intergenic 45.0%
TCCTCATCTGTAGATGTTCC+TGG + chr8_1:77482814-77482833 Msa1215980:intron 45.0%
ACCAGGAACATCTACAGATG+AGG - chr8_1:77482818-77482837 None:intergenic 45.0%
CGACCCTCCAAATAAAAGAC+AGG - chr8_1:77482970-77482989 None:intergenic 45.0%
CAGCAGCCATGTTGAAAGTT+TGG - chr8_1:77483043-77483062 None:intergenic 45.0%
CAACATGGCTGCTGATCATA+TGG + chr8_1:77483049-77483068 Msa1215980:intron 45.0%
TCCATCTACTGCAAAGTCAC+AGG + chr8_1:77483147-77483166 Msa1215980:CDS 45.0%
ACCTGTGACTTTGCAGTAGA+TGG - chr8_1:77483151-77483170 None:intergenic 45.0%
CATTTCCCTACATTGCCTGA+CGG + chr8_1:77483464-77483483 Msa1215980:intron 45.0%
TGTAACCGTCAGGCAATGTA+GGG - chr8_1:77483472-77483491 None:intergenic 45.0%
ATGTAACCGTCAGGCAATGT+AGG - chr8_1:77483473-77483492 None:intergenic 45.0%
GCTGCTATCTTGGATTACAG+AGG - chr8_1:77483582-77483601 None:intergenic 45.0%
! GACTTACAGTGCTGCTATCT+TGG - chr8_1:77483592-77483611 None:intergenic 45.0%
!! CAGCGCGAGTTTTATCTTGA+AGG + chr8_1:77483687-77483706 Msa1215980:intron 45.0%
!! CGCGAGTTTTATCTTGAAGG+AGG + chr8_1:77483690-77483709 Msa1215980:CDS 45.0%
TTATCTTGAAGGAGGAGCCA+TGG + chr8_1:77483698-77483717 Msa1215980:CDS 45.0%
CTGTTCCATGGCTTCATGAA+TGG - chr8_1:77483871-77483890 None:intergenic 45.0%
! AGGGCGTTATGATGACCTTA+AGG + chr8_1:77483974-77483993 Msa1215980:CDS 45.0%
AATGTTTCTCCAGACTGCAC+AGG + chr8_1:77484086-77484105 Msa1215980:intron 45.0%
CAATATTGTCCTGTGCAGTC+TGG - chr8_1:77484098-77484117 None:intergenic 45.0%
CACATGCTGAAAGCTGAGAA+CGG - chr8_1:77484220-77484239 None:intergenic 45.0%
ATTCATCAGCTAGTGCAACG+AGG + chr8_1:77484456-77484475 Msa1215980:CDS 45.0%
TTCATCAGCTAGTGCAACGA+GGG + chr8_1:77484457-77484476 Msa1215980:CDS 45.0%
! TGATGATGTTGGAGACCGAT+CGG + chr8_1:77484777-77484796 Msa1215980:intron 45.0%
ACCAATTACTGTAAGGCAGC+TGG + chr8_1:77484963-77484982 Msa1215980:CDS 45.0%
TCCAGCTGCCTTACAGTAAT+TGG - chr8_1:77484967-77484986 None:intergenic 45.0%
TGAAAATGCACCAGGAGGTA+TGG - chr8_1:77485070-77485089 None:intergenic 45.0%
! GCCTTTTTCCGCTCTTTTGT+TGG + chr8_1:77485845-77485864 Msa1215980:intron 45.0%
CTCGGTAGCATGATTAGATC+TGG - chr8_1:77485915-77485934 None:intergenic 45.0%
CAGATCTAATCATGCTACCG+AGG + chr8_1:77485913-77485932 Msa1215980:intron 45.0%
AGACACGGTGAAAAGCCTTA+TGG - chr8_1:77485954-77485973 None:intergenic 45.0%
! GCTTTTCACCGTGTCTACAA+TGG + chr8_1:77485958-77485977 Msa1215980:CDS 45.0%
AGCTGCATCCATTGTAGACA+CGG - chr8_1:77485969-77485988 None:intergenic 45.0%
ACAATGGATGCAGCTAAGTC+TGG + chr8_1:77485974-77485993 Msa1215980:CDS 45.0%
ACGACAAACCTGTATCTCAC+GGG - chr8_1:77486035-77486054 None:intergenic 45.0%
CACGACAAACCTGTATCTCA+CGG - chr8_1:77486036-77486055 None:intergenic 45.0%
! GATTGATGATCTCGGCAGAA+TGG + chr8_1:77486191-77486210 Msa1215980:CDS 45.0%
! TTGATGATCTCGGCAGAATG+GGG + chr8_1:77486193-77486212 Msa1215980:CDS 45.0%
CTCTCTGGTGCATGATTAGA+AGG - chr8_1:77486633-77486652 None:intergenic 45.0%
TGTACTCTACTTCGTCTCTC+TGG - chr8_1:77486648-77486667 None:intergenic 45.0%
GGTGGGAAAACTGACAAGTT+AGG - chr8_1:77486701-77486720 None:intergenic 45.0%
! TGTCAGTTTTCCCACCCATT+AGG + chr8_1:77486705-77486724 Msa1215980:three_prime_UTR 45.0%
GGATGCCCTTAAATGAAGCT+TGG - chr8_1:77486748-77486767 None:intergenic 45.0%
!! GAAAAGTGTAGTGGGTGCGT+GGG - chr8_1:77480572-77480591 None:intergenic 50.0%
! TGTGGCGGGAAAAGTGTAGT+GGG - chr8_1:77480580-77480599 None:intergenic 50.0%
! TTGTGGCGGGAAAAGTGTAG+TGG - chr8_1:77480581-77480600 None:intergenic 50.0%
! TTTTGGCGGGAATGTTGTGG+CGG - chr8_1:77480595-77480614 None:intergenic 50.0%
!! ATAAGAGGGAGGGTTTTGGC+GGG - chr8_1:77480608-77480627 None:intergenic 50.0%
GGAGCAGATCGGAGTTTAGA+AGG - chr8_1:77480960-77480979 None:intergenic 50.0%
GAATATCGGCAGGAGCAGAT+CGG - chr8_1:77480971-77480990 None:intergenic 50.0%
TCCTGCCGATATTCTTCCTC+TGG + chr8_1:77480977-77480996 Msa1215980:CDS 50.0%
ACCAGAGGAAGAATATCGGC+AGG - chr8_1:77480981-77481000 None:intergenic 50.0%
ACGAAGGTTGCTGGAGATAC+TGG + chr8_1:77481123-77481142 Msa1215980:CDS 50.0%
GATATGGAAGATGCTGCTCC+TGG + chr8_1:77481147-77481166 Msa1215980:CDS 50.0%
TCACATGTGTCGTGTCAGAC+CGG - chr8_1:77481338-77481357 None:intergenic 50.0%
ATGGGACAAGGTTCTTCTCC+AGG - chr8_1:77481993-77482012 None:intergenic 50.0%
AACCTTGTCCCATTGATCCG+TGG + chr8_1:77482000-77482019 Msa1215980:CDS 50.0%
GGAAATGAAGCCAAGTCTCG+AGG + chr8_1:77482483-77482502 Msa1215980:CDS 50.0%
! TCTGGCAAATGCTGCTTGCA+AGG - chr8_1:77483082-77483101 None:intergenic 50.0%
TGCAAGCAGCATTTGCCAGA+TGG + chr8_1:77483082-77483101 Msa1215980:intron 50.0%
GCAAGCAGCATTTGCCAGAT+GGG + chr8_1:77483083-77483102 Msa1215980:intron 50.0%
CAAGCAGCATTTGCCAGATG+GGG + chr8_1:77483084-77483103 Msa1215980:intron 50.0%
CCTCTTAATCTCACCCCATC+TGG - chr8_1:77483100-77483119 None:intergenic 50.0%
CCAGATGGGGTGAGATTAAG+AGG + chr8_1:77483097-77483116 Msa1215980:CDS 50.0%
GGAAAAGGATCATCAGCTGC+TGG + chr8_1:77483548-77483567 Msa1215980:CDS 50.0%
CTTGGATTACAGAGGCTGTG+AGG - chr8_1:77483574-77483593 None:intergenic 50.0%
GGTTGCCATTCATGAAGCCA+TGG + chr8_1:77483863-77483882 Msa1215980:CDS 50.0%
TCATCATAACGCCCTGATGG+GGG - chr8_1:77483969-77483988 None:intergenic 50.0%
GTCATCATAACGCCCTGATG+GGG - chr8_1:77483970-77483989 None:intergenic 50.0%
GGTCATCATAACGCCCTGAT+GGG - chr8_1:77483971-77483990 None:intergenic 50.0%
AGGTCATCATAACGCCCTGA+TGG - chr8_1:77483972-77483991 None:intergenic 50.0%
TCATCAGCTAGTGCAACGAG+GGG + chr8_1:77484458-77484477 Msa1215980:CDS 50.0%
TGAATGCCACCCTCGTCTAT+CGG + chr8_1:77484631-77484650 Msa1215980:CDS 50.0%
TATCGGAAGCTGCAGCAACA+AGG + chr8_1:77484648-77484667 Msa1215980:CDS 50.0%
AGGCGGCAAGCAAATGAAAC+TGG + chr8_1:77484925-77484944 Msa1215980:CDS 50.0%
GGCAGCTGGAAGCTATTGTA+AGG + chr8_1:77484977-77484996 Msa1215980:CDS 50.0%
! CACCTTTTGTCCATACCTCC+TGG + chr8_1:77485057-77485076 Msa1215980:intron 50.0%
! CACCAGGAGGTATGGACAAA+AGG - chr8_1:77485062-77485081 None:intergenic 50.0%
GGCTTCTTGCACATTGTCCT+CGG - chr8_1:77485933-77485952 None:intergenic 50.0%
TGTATCTCACGGGCCATTTC+AGG - chr8_1:77486025-77486044 None:intergenic 50.0%
TGAAATGGCCCGTGAGATAC+AGG + chr8_1:77486024-77486043 Msa1215980:CDS 50.0%
!! GGAAAAGTGTAGTGGGTGCG+TGG - chr8_1:77480573-77480592 None:intergenic 55.0%
TTTGGCGGGAATGTTGTGGC+GGG - chr8_1:77480594-77480613 None:intergenic 55.0%
!! GGGTTTTGGCGGGAATGTTG+TGG - chr8_1:77480598-77480617 None:intergenic 55.0%
!! ATGTCAGGTTGGGACGAAGG+AGG + chr8_1:77480717-77480736 Msa1215980:CDS 55.0%
ACAGCGACCAAGCACACTCA+TGG + chr8_1:77480748-77480767 Msa1215980:CDS 55.0%
CAGCGACCAAGCACACTCAT+GGG + chr8_1:77480749-77480768 Msa1215980:CDS 55.0%
CAAGCACACTCATGGGACGA+CGG + chr8_1:77480756-77480775 Msa1215980:CDS 55.0%
! GTGGTTGGAGATGGTGGCAT+CGG - chr8_1:77480796-77480815 None:intergenic 55.0%
GATGGTGTGGTTGGAGATGG+TGG - chr8_1:77480802-77480821 None:intergenic 55.0%
GAGGATGGTGTGGTTGGAGA+TGG - chr8_1:77480805-77480824 None:intergenic 55.0%
AGGGGAAGCAAGTTCCGTGT+CGG + chr8_1:77481809-77481828 Msa1215980:CDS 55.0%
AGCCACGGATCAATGGGACA+AGG - chr8_1:77482005-77482024 None:intergenic 55.0%
TGAAGGAGGAGCCATGGTCT+TGG + chr8_1:77483704-77483723 Msa1215980:CDS 55.0%
ACCTCCATCTGCCAAGACCA+TGG - chr8_1:77483718-77483737 None:intergenic 55.0%
ATAACGCCCTGATGGGGGAT+TGG - chr8_1:77483964-77483983 None:intergenic 55.0%
GAACAGGACTCCCGTTTCCA+AGG + chr8_1:77484484-77484503 Msa1215980:CDS 55.0%
CTGCAGCTTCCGATAGACGA+GGG - chr8_1:77484643-77484662 None:intergenic 55.0%
! CGTGGGAGCGTAGGATATCG+TGG - chr8_1:77480555-77480574 None:intergenic 60.0%
CGTCGTCCCATGAGTGTGCT+TGG - chr8_1:77480758-77480777 None:intergenic 60.0%
! AAGCAAGTTCCGTGTCGGCC+AGG + chr8_1:77481814-77481833 Msa1215980:CDS 60.0%
! TTCCGTGTCGGCCAGGACTT+GGG + chr8_1:77481821-77481840 Msa1215980:CDS 60.0%
ACAACTGCTCCCCCAAGTCC+TGG - chr8_1:77481835-77481854 None:intergenic 60.0%
! GGAGCCATGGTCTTGGCAGA+TGG + chr8_1:77483711-77483730 Msa1215980:CDS 60.0%
! GCCATGGTCTTGGCAGATGG+AGG + chr8_1:77483714-77483733 Msa1215980:CDS 60.0%
CTGCTGCCAATCCCCCATCA+GGG + chr8_1:77483955-77483974 Msa1215980:CDS 60.0%
CAGCTTCCGATAGACGAGGG+TGG - chr8_1:77484640-77484659 None:intergenic 60.0%
GCTGCAGCTTCCGATAGACG+AGG - chr8_1:77484644-77484663 None:intergenic 60.0%
! TAGTGGGTGCGTGGGAGCGT+AGG - chr8_1:77480564-77480583 None:intergenic 65.0%
!! TGGCATCGGTTTCGCCGCCA+CGG - chr8_1:77480782-77480801 None:intergenic 65.0%
! GTTTGAAACTGCGGCGGCGC+AGG + chr8_1:77481083-77481102 Msa1215980:intron 65.0%
! AACTGCGGCGGCGCAGGTTT+TGG + chr8_1:77481089-77481108 Msa1215980:CDS 65.0%
! GTTCCGTGTCGGCCAGGACT+TGG + chr8_1:77481820-77481839 Msa1215980:CDS 65.0%
! TCCGTGTCGGCCAGGACTTG+GGG + chr8_1:77481822-77481841 Msa1215980:CDS 65.0%
CGCAGTGGGACCTCGAGACT+TGG - chr8_1:77482496-77482515 None:intergenic 65.0%
GCTGCTGCCAATCCCCCATC+AGG + chr8_1:77483954-77483973 Msa1215980:CDS 65.0%
GTGCAACGAGGGGCGAGAAC+AGG + chr8_1:77484468-77484487 Msa1215980:CDS 65.0%
CACTCATGGGACGACGGCCG+TGG + chr8_1:77480762-77480781 Msa1215980:CDS 70.0%
TCATGGGACGACGGCCGTGG+CGG + chr8_1:77480765-77480784 Msa1215980:CDS 70.0%
CCCCCAAGTCCTGGCCGACA+CGG - chr8_1:77481826-77481845 None:intergenic 70.0%
! CCGTGTCGGCCAGGACTTGG+GGG + chr8_1:77481823-77481842 Msa1215980:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 77480550 77486981 77480550 ID=Msa1215980;Name=Msa1215980
chr8_1 mRNA 77480550 77486981 77480550 ID=Msa1215980-mRNA-1;Parent=Msa1215980;Name=Msa1215980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=167|1|1|1|1|1|18|279|733
chr8_1 exon 77480550 77480998 77480550 ID=Msa1215980-mRNA-1:exon:26696;Parent=Msa1215980-mRNA-1
chr8_1 exon 77481084 77481227 77481084 ID=Msa1215980-mRNA-1:exon:26697;Parent=Msa1215980-mRNA-1
chr8_1 exon 77481703 77481882 77481703 ID=Msa1215980-mRNA-1:exon:26698;Parent=Msa1215980-mRNA-1
chr8_1 exon 77481990 77482088 77481990 ID=Msa1215980-mRNA-1:exon:26699;Parent=Msa1215980-mRNA-1
chr8_1 exon 77482171 77482307 77482171 ID=Msa1215980-mRNA-1:exon:26700;Parent=Msa1215980-mRNA-1
chr8_1 exon 77482425 77482530 77482425 ID=Msa1215980-mRNA-1:exon:26701;Parent=Msa1215980-mRNA-1
chr8_1 exon 77482861 77482995 77482861 ID=Msa1215980-mRNA-1:exon:26702;Parent=Msa1215980-mRNA-1
chr8_1 exon 77483091 77483168 77483091 ID=Msa1215980-mRNA-1:exon:26703;Parent=Msa1215980-mRNA-1
chr8_1 exon 77483500 77483604 77483500 ID=Msa1215980-mRNA-1:exon:26704;Parent=Msa1215980-mRNA-1
chr8_1 exon 77483690 77483781 77483690 ID=Msa1215980-mRNA-1:exon:26705;Parent=Msa1215980-mRNA-1
chr8_1 exon 77483863 77483995 77483863 ID=Msa1215980-mRNA-1:exon:26706;Parent=Msa1215980-mRNA-1
chr8_1 exon 77484099 77484194 77484099 ID=Msa1215980-mRNA-1:exon:26707;Parent=Msa1215980-mRNA-1
chr8_1 exon 77484428 77484525 77484428 ID=Msa1215980-mRNA-1:exon:26708;Parent=Msa1215980-mRNA-1
chr8_1 exon 77484610 77484700 77484610 ID=Msa1215980-mRNA-1:exon:26709;Parent=Msa1215980-mRNA-1
chr8_1 exon 77484919 77485028 77484919 ID=Msa1215980-mRNA-1:exon:26710;Parent=Msa1215980-mRNA-1
chr8_1 exon 77485916 77486045 77485916 ID=Msa1215980-mRNA-1:exon:26711;Parent=Msa1215980-mRNA-1
chr8_1 exon 77486129 77486230 77486129 ID=Msa1215980-mRNA-1:exon:26712;Parent=Msa1215980-mRNA-1
chr8_1 exon 77486619 77486981 77486619 ID=Msa1215980-mRNA-1:exon:26713;Parent=Msa1215980-mRNA-1
chr8_1 five_prime_UTR 77480550 77480716 77480550 ID=Msa1215980-mRNA-1:five_prime_utr;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77480717 77480998 77480717 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77481084 77481227 77481084 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77481703 77481882 77481703 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77481990 77482088 77481990 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77482171 77482307 77482171 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77482425 77482530 77482425 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77482861 77482995 77482861 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77483091 77483168 77483091 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77483500 77483604 77483500 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77483690 77483781 77483690 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77483863 77483995 77483863 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77484099 77484194 77484099 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77484428 77484525 77484428 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77484610 77484700 77484610 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77484919 77485028 77484919 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77485916 77486045 77485916 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77486129 77486230 77486129 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 CDS 77486619 77486702 77486619 ID=Msa1215980-mRNA-1:cds;Parent=Msa1215980-mRNA-1
chr8_1 three_prime_UTR 77486703 77486981 77486703 ID=Msa1215980-mRNA-1:three_prime_utr;Parent=Msa1215980-mRNA-1
Gene Sequence

>Msa1215980

ATGTCAGGTTGGGACGAAGGAGGCGTATACTACAGCGACCAAGCACACTCATGGGACGACGGCCGTGGCGGCGAAACCGATGCCACCATCTCCAACCACACCATCCTCCAAAAATTCAAAGAATTCATCCGTAACTTTGAAACCGGTAACAATGTCTTTCCTTACAGAGAAAGCCTTCTTCACAATCCCAAATATCTTCTCGTTGATATGGAAGATCTCGACTCTTTTGACCCTGATCTTCCTTCTAAACTCCGATCTGCTCCTGCCGATATTCTTCCTCTGTTTGAAACTGCGGCGGCGCAGGTTTTGGTGAGTTTGAAGACGAAGGTTGCTGGAGATACTGGTGATATGGAAGATGCTGCTCCTGGTGATGTTCAGATTCTTCTTACTTCTAAGGAGGATTCTGTTTCGATGAGATCGCTTGGGGCTCAATACATTTCGAAGCTTGTTAAAATTGCTGGGATAACAATTGCTGCATCGAGGACTAAGGCAAAAGCAACATATGTGACCTTGATATGTAAGAATTGTAAGAAGGGGAAGCAAGTTCCGTGTCGGCCAGGACTTGGGGGAGCAGTTGTTCCACGTTCATGTGATCATGTTCCTCAGCCTGGAGAAGAACCTTGTCCCATTGATCCGTGGCTTATTGTTCCCGACAAGAGCAAGTATGTTGATCAACAAACCTTGAAGTTGCAAGAAAATCCGGAGGACGTTCCAACTGGAGAGCTTCCTAGAAACTTGCTTCTATCCGTTGATCGACATCTTGTTCAAACTGTAGTGCCTGGCTCAAGATTAACAATCGTTGGAATCTATAGTATTTTTCAGGCCTCCAACTCTTCTACATCCAACAAAGGAGCAGTTGCAGTTAGACAGCCTTATATCAGGGTTGTAGGAATAGAAGATGGAAATGAAGCCAAGTCTCGAGGTCCCACTGCGTTTACAAATGAAGAAATTGAAGAGTTCAAAAAATTTGCAGCTGATCATGATGTATACAAAAATATATGCTCCAAGATTGCTCCGTCTATATTTGGCCATGATGATGTCAAAAAGGCTATGGCCTGTCTTTTATTTGGAGGGTCGAGAAAGCATTTGCCAGATGGGGTGAGATTAAGAGGTGATATCAATGTGTTACTTCTCGGGGATCCATCTACTGCAAAGTCACAGTTTCTCAAGTTTGTTGAAAAGACTGCACCTATTGCTGTTTATACTTCTGGAAAAGGATCATCAGCTGCTGGCCTCACAGCCTCTGTAATCCAAGATAGCAGCACTCGCGAGTTTTATCTTGAAGGAGGAGCCATGGTCTTGGCAGATGGAGGTGTTGTCTGCATTGATGAGTTTGATAAGATGAGACCAGAAGATAGGGTTGCCATTCATGAAGCCATGGAACAGCAAACTATATCCATAGCCAAAGCAGGAATAACAACCGTTCTTAATTCAAGGACTTCTGTTCTTGCTGCTGCCAATCCCCCATCAGGGCGTTATGATGACCTTAAGACTGCACAGGACAATATTGATTTACAGACAACTATTCTTTCTAGGTTTGATTTAATCTTCATAGTGAAAGACATCAGAATGTACGAACAAGATAAGATAATAGCTAGTCATATCATAAAGGTTCATTCATCAGCTAGTGCAACGAGGGGCGAGAACAGGACTCCCGTTTCCAAGGAAGAAAATTGGCTGAAGAGGTACTTGCAATATTGTCGAACTGAATGCCACCCTCGTCTATCGGAAGCTGCAGCAACAAGGCTGCAAAATAATTATGTGAATATCAGACAGGATATGAGGCGGCAAGCAAATGAAACTGGAGAAGCGGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTGTAAGGTTGAGTGAGTCACTTGCAAAGATGAAACTATCTAATCATGCTACCGAGGACAATGTGCAAGAAGCCATAAGGCTTTTCACCGTGTCTACAATGGATGCAGCTAAGTCTGGAATAAACCAACAGATAAATCTCTCACCTGAAATGGCCCGTGAGATACAGCAAGCAGAAGTTCAGATAAAGAGAAGAATCGGGATTGGGAACCACATATCAGAAAGAAGACTGATTGATGATCTCGGCAGAATGGGGATGAATGAATCTATTGTAAGAAGAGCCCTTCTAATCATGCACCAGAGAGACGAAGTAGAGTACAAGCGAGAAAGGCGTGTTGTATTTCGGAAAGCCTAA
Protein sequence

>Msa1215980

MSGWDEGGVYYSDQAHSWDDGRGGETDATISNHTILQKFKEFIRNFETGNNVFPYRESLLHNPKYLLVDMEDLDSFDPDLPSKLRSAPADILPLFETAAAQVLVSLKTKVAGDTGDMEDAAPGDVQILLTSKEDSVSMRSLGAQYISKLVKIAGITIAASRTKAKATYVTLICKNCKKGKQVPCRPGLGGAVVPRSCDHVPQPGEEPCPIDPWLIVPDKSKYVDQQTLKLQENPEDVPTGELPRNLLLSVDRHLVQTVVPGSRLTIVGIYSIFQASNSSTSNKGAVAVRQPYIRVVGIEDGNEAKSRGPTAFTNEEIEEFKKFAADHDVYKNICSKIAPSIFGHDDVKKAMACLLFGGSRKHLPDGVRLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLTASVIQDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYEQDKIIASHIIKVHSSASATRGENRTPVSKEENWLKRYLQYCRTECHPRLSEAAATRLQNNYVNIRQDMRRQANETGEAAAIPITVRQLEAIVRLSESLAKMKLSNHATEDNVQEAIRLFTVSTMDAAKSGINQQINLSPEMAREIQQAEVQIKRRIGIGNHISERRLIDDLGRMGMNESIVRRALLIMHQRDEVEYKRERRVVFRKA*