Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206200 | XP_013457561.1 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206200 | sp|Q944A9|NPS11_ARATH | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 2.28e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206200 | A0A072UPG8 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 534 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1206200 | Msa1206230 | 0.830224 | 3.312274e-55 | -8.615850e-47 |
| Msa1206200 | Msa1297970 | 0.806630 | 7.492919e-50 | -8.615850e-47 |
| Msa1206200 | Msa1305280 | 0.861076 | 1.322472e-63 | -8.615850e-47 |
| Msa1206200 | Msa1432920 | 0.818672 | 1.734625e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206200 | MtrunA17_Chr4g0055321 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 534 |
| Msa1206200 | MtrunA17_Chr2g0302561 | 65.370 | 257 | 84 | 2 | 7 | 260 | 7 | 261 | 1.45e-110 | 319 |
| Msa1206200 | MtrunA17_Chr4g0069271 | 64.202 | 257 | 87 | 2 | 7 | 260 | 7 | 261 | 2.35e-105 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206200 | AT2G35190.1 | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 2.31e-135 | 382 |
| Msa1206200 | AT3G17440.1 | 63.953 | 258 | 87 | 2 | 7 | 260 | 7 | 262 | 7.69e-108 | 313 |
| Msa1206200 | AT1G48240.1 | 63.178 | 258 | 89 | 2 | 7 | 260 | 7 | 262 | 4.61e-106 | 308 |
| Msa1206200 | AT1G48240.2 | 63.380 | 213 | 72 | 2 | 52 | 260 | 1 | 211 | 2.74e-84 | 251 |
| Msa1206200 | AT3G17440.2 | 61.353 | 207 | 76 | 1 | 7 | 209 | 7 | 213 | 4.83e-84 | 251 |
Find 82 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGTGTCACCTTCAT+TGG | 0.188616 | 8_1:+63102204 | None:intergenic |
| CATATTGATTTGGTGCTCTT+TGG | 0.220494 | 8_1:-63099123 | Msa1206200:three_prime_UTR |
| TGATTGATTACCGTTGAAAA+TGG | 0.262568 | 8_1:-63103583 | Msa1206200:exon |
| TAGGAAATGGGTGATGGTTT+TGG | 0.271860 | 8_1:+63103996 | None:intergenic |
| TCAGAAGCTGGAGAAAATTA+AGG | 0.285108 | 8_1:-63103380 | Msa1206200:CDS |
| AAGCCATTGAGAGGGGAAAA+AGG | 0.306993 | 8_1:-63101279 | Msa1206200:CDS |
| TTTGGTGCTCTTTGGTTTGA+TGG | 0.316124 | 8_1:-63099115 | Msa1206200:three_prime_UTR |
| GTTCAAGACACGGTAAATAT+TGG | 0.323026 | 8_1:-63100316 | Msa1206200:CDS |
| TATAAAGAAAGCATCTAAAT+TGG | 0.326069 | 8_1:-63100113 | Msa1206200:CDS |
| TGAATGAGGGACAATTGTTT+TGG | 0.334093 | 8_1:-63099188 | Msa1206200:three_prime_UTR |
| ATAATATTCTCTCATGCTTC+AGG | 0.348689 | 8_1:+63099011 | None:intergenic |
| TCTTCTGTGTCACCTTCATT+GGG | 0.361367 | 8_1:+63102205 | None:intergenic |
| TGCTACTGACAAGTGTATTA+TGG | 0.366980 | 8_1:-63099971 | Msa1206200:CDS |
| ATGATCTCATCATATTGATT+TGG | 0.372273 | 8_1:-63099133 | Msa1206200:three_prime_UTR |
| AATAAATGCAGCACTCTGTT+TGG | 0.387247 | 8_1:-63103731 | Msa1206200:five_prime_UTR |
| AAGGGATCAAAAGCGCGTTT+AGG | 0.389328 | 8_1:+63103756 | None:intergenic |
| AAGGACATTCGCGACATTCC+AGG | 0.392891 | 8_1:-63099288 | Msa1206200:CDS |
| AGATCTGAATGAGGAAGGTT+TGG | 0.393793 | 8_1:+63103637 | None:intergenic |
| TGAGACTGCTGCAGCTCTTA+AGG | 0.393912 | 8_1:-63100290 | Msa1206200:CDS |
| TCTAAATTGGTCAAAGAAAT+CGG | 0.398484 | 8_1:-63100100 | Msa1206200:CDS |
| TCGCGAATGTCCTTGTTCTC+TGG | 0.411929 | 8_1:+63099297 | None:intergenic |
| CTTCTGTTATTCGTGACAAC+AGG | 0.414955 | 8_1:+63099255 | None:intergenic |
| TGATAAAGAAGTCAAAGCTT+TGG | 0.415503 | 8_1:-63102631 | Msa1206200:CDS |
| ATTGTGTTGTTACATAATAG+TGG | 0.425954 | 8_1:-63099047 | Msa1206200:three_prime_UTR |
| AAGAATAAACAAAACATTGT+TGG | 0.436069 | 8_1:+63103838 | None:intergenic |
| AATGTCAAATGAACAGCTAA+TGG | 0.436817 | 8_1:-63101335 | Msa1206200:CDS |
| TAAGCGAATTGAACTCTTTG+AGG | 0.446185 | 8_1:-63102230 | Msa1206200:CDS |
| GAAAATGTCTTGCTAGCTTC+CGG | 0.447441 | 8_1:-63102184 | Msa1206200:intron |
| CGAATAACAGAAGACTGCTT+TGG | 0.448220 | 8_1:-63099245 | Msa1206200:CDS |
| CTAACGTGTTGACTCGTGTA+TGG | 0.453343 | 8_1:+63104026 | None:intergenic |
| AGAATAAACAAAACATTGTT+GGG | 0.455034 | 8_1:+63103839 | None:intergenic |
| AATGAACAGCTAATGGATCA+TGG | 0.468547 | 8_1:-63101328 | Msa1206200:CDS |
| TTTGAACGACTATAGGAAAT+GGG | 0.468998 | 8_1:+63103984 | None:intergenic |
| CGATAGAGCGCGGAAATTGT+CGG | 0.478777 | 8_1:+63103509 | None:intergenic |
| CTCTTTGAGGGGCCCAATGA+AGG | 0.480045 | 8_1:-63102217 | Msa1206200:CDS |
| GAGAAAATGCGAGAATGTAA+AGG | 0.481989 | 8_1:-63103319 | Msa1206200:CDS |
| AGCTAATGGATCATGGGAAT+CGG | 0.490306 | 8_1:-63101321 | Msa1206200:CDS |
| AATTGCTATCATTATTGTAA+AGG | 0.494738 | 8_1:-63099920 | Msa1206200:intron |
| AGAAAATGCGAGAATGTAAA+GGG | 0.498268 | 8_1:-63103318 | Msa1206200:intron |
| AAGCGAATTGAACTCTTTGA+GGG | 0.509218 | 8_1:-63102229 | Msa1206200:CDS |
| GATTATTGGATTCTGTAATG+TGG | 0.515607 | 8_1:+63103689 | None:intergenic |
| CAGAAATGGATTTCAGAAGC+TGG | 0.516653 | 8_1:-63103392 | Msa1206200:CDS |
| AGTGCAAAATCTGACGGTTG+AGG | 0.520924 | 8_1:-63103607 | Msa1206200:five_prime_UTR |
| ACAACAGGAGGAGCTAATCC+TGG | 0.528610 | 8_1:+63099270 | None:intergenic |
| GAGTAGAAAGAGCAGGCAAT+TGG | 0.528613 | 8_1:-63103353 | Msa1206200:CDS |
| GAGCAGAGTTGTCAATGAGC+TGG | 0.530134 | 8_1:-63100152 | Msa1206200:CDS |
| TGCTGCAGCTCTTAAGGCAC+AGG | 0.531146 | 8_1:-63100284 | Msa1206200:intron |
| TAAAGAAGTCAAAGCTTTGG+AGG | 0.533235 | 8_1:-63102628 | Msa1206200:CDS |
| TTACATAATAGTGGATTGGT+TGG | 0.533723 | 8_1:-63099038 | Msa1206200:three_prime_UTR |
| GTTGTTACATAATAGTGGAT+TGG | 0.536981 | 8_1:-63099042 | Msa1206200:three_prime_UTR |
| ATGAACAGCTAATGGATCAT+GGG | 0.537163 | 8_1:-63101327 | Msa1206200:CDS |
| GTTGAAAATGGATCAGTTGT+CGG | 0.540328 | 8_1:-63103571 | Msa1206200:exon |
| GGTCAAAGAAATCGGTAGGC+AGG | 0.545431 | 8_1:-63100092 | Msa1206200:intron |
| GAGGATCTGGCGGAGATCGA+CGG | 0.558067 | 8_1:-63103540 | Msa1206200:CDS |
| GGATCATGGGAATCGGATGA+TGG | 0.561416 | 8_1:-63101314 | Msa1206200:CDS |
| GTGAAGATTGTGATGAATGA+GGG | 0.562280 | 8_1:-63099201 | Msa1206200:three_prime_UTR |
| CTGTTATTCGTGACAACAGG+AGG | 0.572975 | 8_1:+63099258 | None:intergenic |
| CGACTATAGGAAATGGGTGA+TGG | 0.574117 | 8_1:+63103990 | None:intergenic |
| GCTAAACAAATGAATCCTCT+CGG | 0.575017 | 8_1:-63098903 | Msa1206200:three_prime_UTR |
| AGTGAAGATTGTGATGAATG+AGG | 0.580215 | 8_1:-63099202 | Msa1206200:three_prime_UTR |
| TAAACAAAACATTGTTGGGT+CGG | 0.582811 | 8_1:+63103843 | None:intergenic |
| ACACAGATCAAGCCATTGAG+AGG | 0.592198 | 8_1:-63101288 | Msa1206200:CDS |
| AATTGGTCAAAGAAATCGGT+AGG | 0.592479 | 8_1:-63100096 | Msa1206200:CDS |
| CGGCGAGATCTGAATGAGGA+AGG | 0.595127 | 8_1:+63103632 | None:intergenic |
| TGGTTTGATGGCGATGACAA+TGG | 0.597022 | 8_1:-63099103 | Msa1206200:three_prime_UTR |
| CACAGATCAAGCCATTGAGA+GGG | 0.597880 | 8_1:-63101287 | Msa1206200:CDS |
| GGCGATCAGCGAGGATCTGG+CGG | 0.606362 | 8_1:-63103550 | Msa1206200:CDS |
| ATAGTCGTTCAAAATTTAAG+CGG | 0.612540 | 8_1:-63103974 | Msa1206200:five_prime_UTR |
| GCCGTTAGTGCAAAATCTGA+CGG | 0.619243 | 8_1:-63103613 | Msa1206200:five_prime_UTR |
| TTTGATTCTTGATATAACGA+TGG | 0.621864 | 8_1:+63104057 | None:intergenic |
| GCTTGTACATCCAGAGAACA+AGG | 0.635136 | 8_1:-63099307 | Msa1206200:CDS |
| AGGATGCGAGTAGAAAGAGC+AGG | 0.636628 | 8_1:-63103360 | Msa1206200:CDS |
| GCAATAGATTGTTCAAGACA+CGG | 0.645457 | 8_1:-63100326 | Msa1206200:intron |
| ATTAATAATCACGATTCACG+AGG | 0.647397 | 8_1:-63103888 | Msa1206200:five_prime_UTR |
| TAGATTCTTACGATAGAGCG+CGG | 0.658099 | 8_1:+63103499 | None:intergenic |
| CTAACGGCGAGATCTGAATG+AGG | 0.662619 | 8_1:+63103628 | None:intergenic |
| AGCGAATTGAACTCTTTGAG+GGG | 0.666057 | 8_1:-63102228 | Msa1206200:CDS |
| CAATTACTCCAATGACGATG+AGG | 0.668385 | 8_1:+63099938 | None:intergenic |
| ACAGATCAAGCCATTGAGAG+GGG | 0.669219 | 8_1:-63101286 | Msa1206200:CDS |
| TTAATAATCACGATTCACGA+GGG | 0.705362 | 8_1:-63103887 | Msa1206200:five_prime_UTR |
| TCAGTTGTCGGCGATCAGCG+AGG | 0.738571 | 8_1:-63103559 | Msa1206200:CDS |
| CAAACAACAAACAATCCGAG+AGG | 0.740636 | 8_1:+63098888 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTTTAGTATTTT+TGG | + | chr8_1:63098878-63098897 | None:intergenic | 10.0% |
| !! | AATAAAAATGAATGTAAAAA+AGG | + | chr8_1:63101160-63101179 | None:intergenic | 10.0% |
| !!! | ATAATTTGATGATTTTTGAA+AGG | + | chr8_1:63099034-63099053 | None:intergenic | 15.0% |
| !!! | GATTTTATAATGTAGATTAT+TGG | + | chr8_1:63099138-63099157 | None:intergenic | 15.0% |
| !!! | TCGTTTTCAATATTTTTAAA+GGG | - | chr8_1:63100018-63100037 | Msa1206200:intron | 15.0% |
| !! | ATATTTAGTAATTTAGTCAA+TGG | - | chr8_1:63100772-63100791 | Msa1206200:intron | 15.0% |
| !! | AAATTGTCATAAGATATTTA+CGG | + | chr8_1:63101880-63101899 | None:intergenic | 15.0% |
| !!! | ATTCTTTAATTTAAATGAGA+AGG | + | chr8_1:63101923-63101942 | None:intergenic | 15.0% |
| !! | TTGTATATGAATAAAAATCA+AGG | + | chr8_1:63102009-63102028 | None:intergenic | 15.0% |
| !!! | TTTCTATATTTTGTTTTCAA+AGG | - | chr8_1:63102150-63102169 | Msa1206200:intron | 15.0% |
| !! | AGAAAAATAATTAAACATAC+AGG | + | chr8_1:63103834-63103853 | None:intergenic | 15.0% |
| !!! | TTTTTGGTTCTAAATGAATT+TGG | + | chr8_1:63098862-63098881 | None:intergenic | 20.0% |
| !! | AGAATAAACAAAACATTGTT+GGG | + | chr8_1:63098974-63098993 | None:intergenic | 20.0% |
| !! | AAGAATAAACAAAACATTGT+TGG | + | chr8_1:63098975-63098994 | None:intergenic | 20.0% |
| !!! | TTTTTATCACATTTTCAACA+CGG | + | chr8_1:63099656-63099675 | None:intergenic | 20.0% |
| !!! | TGATTGTATAAAATTGATTC+TGG | - | chr8_1:63099752-63099771 | Msa1206200:intron | 20.0% |
| !!! | TTTTAGCTTAGAAACAATTT+TGG | - | chr8_1:63099890-63099909 | Msa1206200:intron | 20.0% |
| !!! | CTCGTTTTCAATATTTTTAA+AGG | - | chr8_1:63100017-63100036 | Msa1206200:intron | 20.0% |
| !!! | CTTTTTCTCATTCAAAAATT+TGG | + | chr8_1:63100229-63100248 | None:intergenic | 20.0% |
| !!! | ACTTCATGTTTTAAGTTTAT+TGG | - | chr8_1:63100324-63100343 | Msa1206200:intron | 20.0% |
| !! | TGGTATCTATAAATTCTAAA+TGG | - | chr8_1:63100344-63100363 | Msa1206200:intron | 20.0% |
| !! | TGTAAATTCTTGTTAGTAAT+AGG | + | chr8_1:63100377-63100396 | None:intergenic | 20.0% |
| !!! | TATGATCATTTTATTTCTCT+AGG | - | chr8_1:63100722-63100741 | Msa1206200:intron | 20.0% |
| !!! | CATTAATATTTGCTAAACTT+AGG | + | chr8_1:63100912-63100931 | None:intergenic | 20.0% |
| !! | AAATATTAATGCAATCTAGT+AGG | - | chr8_1:63100921-63100940 | Msa1206200:intron | 20.0% |
| !! | GCTTCAATATAAAGTAAAAA+AGG | - | chr8_1:63101191-63101210 | Msa1206200:intron | 20.0% |
| !!! | TTAAAAACACTTGAGTATTT+TGG | - | chr8_1:63101321-63101340 | Msa1206200:CDS | 20.0% |
| !!! | AAATGAAATACAAGCTATTT+TGG | - | chr8_1:63101375-63101394 | Msa1206200:intron | 20.0% |
| !! | TAAACAGATTAAATCTTCTT+TGG | + | chr8_1:63101415-63101434 | None:intergenic | 20.0% |
| !!! | ATTTAATCTGTTTACCATTT+TGG | - | chr8_1:63101421-63101440 | Msa1206200:intron | 20.0% |
| !! | CAGTTAGTTAAGAAAATATA+TGG | - | chr8_1:63101711-63101730 | Msa1206200:intron | 20.0% |
| !! | AACAATAAACAACAAACAAT+AGG | + | chr8_1:63101829-63101848 | None:intergenic | 20.0% |
| !! | TATGAATAAAAATCAAGGTT+GGG | + | chr8_1:63102004-63102023 | None:intergenic | 20.0% |
| !! | ATATGAATAAAAATCAAGGT+TGG | + | chr8_1:63102005-63102024 | None:intergenic | 20.0% |
| !!! | AAAAAAACTTGATTTTGACA+TGG | - | chr8_1:63102592-63102611 | Msa1206200:CDS | 20.0% |
| !!! | AAAAAACTTGATTTTGACAT+GGG | - | chr8_1:63102593-63102612 | Msa1206200:CDS | 20.0% |
| !! | ATGCTTTCTTTATAGAAAAA+TGG | + | chr8_1:63102691-63102710 | None:intergenic | 20.0% |
| !!! | TATAAAGAAAGCATCTAAAT+TGG | - | chr8_1:63102697-63102716 | Msa1206200:intron | 20.0% |
| !! | AATGATTCATAAAGTAAGTT+AGG | + | chr8_1:63102785-63102804 | None:intergenic | 20.0% |
| !! | AATTGCTATCATTATTGTAA+AGG | - | chr8_1:63102890-63102909 | Msa1206200:intron | 20.0% |
| !! | GAAATTTACTTTCTAACTTA+TGG | - | chr8_1:63102918-63102937 | Msa1206200:intron | 20.0% |
| !!! | ATCAAGTATTTTTGAAAGAA+CGG | + | chr8_1:63103995-63104014 | None:intergenic | 20.0% |
| ! | TTTGATTCTTGATATAACGA+TGG | + | chr8_1:63098756-63098775 | None:intergenic | 25.0% |
| !! | CTTAAATTTTGAACGACTAT+AGG | + | chr8_1:63098836-63098855 | None:intergenic | 25.0% |
| ! | ATAGTCGTTCAAAATTTAAG+CGG | - | chr8_1:63098836-63098855 | Msa1206200:three_prime_UTR | 25.0% |
| !!! | GTTGATTTTTTGTTCAGAAA+TGG | - | chr8_1:63099404-63099423 | Msa1206200:intron | 25.0% |
| !! | CTTGATGCTGTTAATTTTAT+TGG | - | chr8_1:63099598-63099617 | Msa1206200:intron | 25.0% |
| ! | AGCTAAAAGTGATTTATGTT+TGG | - | chr8_1:63099794-63099813 | Msa1206200:intron | 25.0% |
| ! | AAGTTAAAAGTCAATTGTAG+AGG | - | chr8_1:63099854-63099873 | Msa1206200:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr8_1:63099944-63099963 | None:intergenic | 25.0% |
| !!! | TACTCCTTTAGAATCAATTT+AGG | - | chr8_1:63099963-63099982 | Msa1206200:CDS | 25.0% |
| ! | GAAAACGAGTTATTTATGTT+TGG | + | chr8_1:63100006-63100025 | None:intergenic | 25.0% |
| !! | TTGATTGTTTGATTCCATTT+TGG | - | chr8_1:63100041-63100060 | Msa1206200:intron | 25.0% |
| ! | TACTCTAGTGTATATATTGT+TGG | - | chr8_1:63100126-63100145 | Msa1206200:CDS | 25.0% |
| ! | ACTCTAGTGTATATATTGTT+GGG | - | chr8_1:63100127-63100146 | Msa1206200:CDS | 25.0% |
| ! | ACATGAAGTAGCAAAATTAA+GGG | + | chr8_1:63100313-63100332 | None:intergenic | 25.0% |
| ! | AACATGAAGTAGCAAAATTA+AGG | + | chr8_1:63100314-63100333 | None:intergenic | 25.0% |
| ! | ATAAATCAAGCATAACAAGA+AGG | + | chr8_1:63100845-63100864 | None:intergenic | 25.0% |
| ! | ACTTCTGCATTATTTCATAT+TGG | - | chr8_1:63101027-63101046 | Msa1206200:intron | 25.0% |
| ! | CTTCTGCATTATTTCATATT+GGG | - | chr8_1:63101028-63101047 | Msa1206200:intron | 25.0% |
| ! | TTGATATTAAGAGCAGAAAT+AGG | + | chr8_1:63101272-63101291 | None:intergenic | 25.0% |
| !!! | GTTTACCATTTTGGTTAATT+TGG | - | chr8_1:63101430-63101449 | Msa1206200:intron | 25.0% |
| ! | TTTGACCTTCAAGTAATATA+TGG | - | chr8_1:63101767-63101786 | Msa1206200:intron | 25.0% |
| ! | AAAGACCATATATTACTTGA+AGG | + | chr8_1:63101775-63101794 | None:intergenic | 25.0% |
| !!! | GATGTTTGATTTGAATATTC+TGG | - | chr8_1:63102384-63102403 | Msa1206200:intron | 25.0% |
| ! | TATTTCATGTGGATAAAGAT+GGG | - | chr8_1:63102426-63102445 | Msa1206200:intron | 25.0% |
| !!! | TTTTTTCTTCGACTATTTCT+GGG | + | chr8_1:63102577-63102596 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTCGACTATTTC+TGG | + | chr8_1:63102578-63102597 | None:intergenic | 25.0% |
| ! | TCTAAATTGGTCAAAGAAAT+CGG | - | chr8_1:63102710-63102729 | Msa1206200:intron | 25.0% |
| ! | CAATTTACCATAAGTAAACA+AGG | + | chr8_1:63103009-63103028 | None:intergenic | 25.0% |
| ! | AAAAGCTATAAATCTGTGAA+AGG | + | chr8_1:63103149-63103168 | None:intergenic | 25.0% |
| !!! | AAACTCTATTCAGTGTTTTT+TGG | - | chr8_1:63103251-63103270 | Msa1206200:intron | 25.0% |
| ! | GGTGTTTACAAAAAGAAAAT+TGG | + | chr8_1:63103344-63103363 | None:intergenic | 25.0% |
| ! | AATCAGTAAAATAAGCAGTT+TGG | + | chr8_1:63103418-63103437 | None:intergenic | 25.0% |
| !! | ATGATCTCATCATATTGATT+TGG | - | chr8_1:63103677-63103696 | Msa1206200:five_prime_UTR | 25.0% |
| !! | ATTGTGTTGTTACATAATAG+TGG | - | chr8_1:63103763-63103782 | Msa1206200:five_prime_UTR | 25.0% |
| !! | ATTTTTATCTGTCGAATGAT+AGG | - | chr8_1:63103880-63103899 | Msa1206200:five_prime_UTR | 25.0% |
| !! | TTTTTATCTGTCGAATGATA+GGG | - | chr8_1:63103881-63103900 | Msa1206200:five_prime_UTR | 25.0% |
| TTTGAACGACTATAGGAAAT+GGG | + | chr8_1:63098829-63098848 | None:intergenic | 30.0% | |
| ! | TTTTGAACGACTATAGGAAA+TGG | + | chr8_1:63098830-63098849 | None:intergenic | 30.0% |
| ATTAATAATCACGATTCACG+AGG | - | chr8_1:63098922-63098941 | Msa1206200:three_prime_UTR | 30.0% | |
| TTAATAATCACGATTCACGA+GGG | - | chr8_1:63098923-63098942 | Msa1206200:three_prime_UTR | 30.0% | |
| TAAACAAAACATTGTTGGGT+CGG | + | chr8_1:63098970-63098989 | None:intergenic | 30.0% | |
| !!! | GAGTGCTGCATTTATTTTAA+GGG | + | chr8_1:63099075-63099094 | None:intergenic | 30.0% |
| !!! | AGAGTGCTGCATTTATTTTA+AGG | + | chr8_1:63099076-63099095 | None:intergenic | 30.0% |
| GATTATTGGATTCTGTAATG+TGG | + | chr8_1:63099124-63099143 | None:intergenic | 30.0% | |
| TGATTGATTACCGTTGAAAA+TGG | - | chr8_1:63099227-63099246 | Msa1206200:exon | 30.0% | |
| ! | TTTACATTCTCGCATTTTCT+CGG | + | chr8_1:63099492-63099511 | None:intergenic | 30.0% |
| AGAAAATGCGAGAATGTAAA+GGG | - | chr8_1:63099492-63099511 | Msa1206200:intron | 30.0% | |
| GATGTTTGTGTTTGATTATG+TGG | - | chr8_1:63099705-63099724 | Msa1206200:intron | 30.0% | |
| TGGACACATTTATATAAACG+TGG | - | chr8_1:63099814-63099833 | Msa1206200:intron | 30.0% | |
| GGACACATTTATATAAACGT+GGG | - | chr8_1:63099815-63099834 | Msa1206200:intron | 30.0% | |
| ! | TGAGCCTAAATTGATTCTAA+AGG | + | chr8_1:63099970-63099989 | None:intergenic | 30.0% |
| AATTTAGGCTCATCTAAAAG+TGG | - | chr8_1:63099978-63099997 | Msa1206200:intron | 30.0% | |
| GTAATTCATGGATCAAAACT+TGG | + | chr8_1:63100080-63100099 | None:intergenic | 30.0% | |
| TGATAAAGAAGTCAAAGCTT+TGG | - | chr8_1:63100179-63100198 | Msa1206200:intron | 30.0% | |
| AATGGTAAGATGTTTAACTC+TGG | - | chr8_1:63100254-63100273 | Msa1206200:intron | 30.0% | |
| CATGAAGTAGCAAAATTAAG+GGG | + | chr8_1:63100312-63100331 | None:intergenic | 30.0% | |
| ! | GAGATTCTAAAGAAGCAAAA+TGG | + | chr8_1:63100463-63100482 | None:intergenic | 30.0% |
| CTTACTTATTGATGCTATCA+AGG | + | chr8_1:63100515-63100534 | None:intergenic | 30.0% | |
| !! | AGTTACTCAGTTTTTAGACA+AGG | - | chr8_1:63100807-63100826 | Msa1206200:intron | 30.0% |
| GAAAAATATGACTGTATGAG+CGG | - | chr8_1:63100955-63100974 | Msa1206200:intron | 30.0% | |
| CATTATTTCATATTGGGAGA+TGG | - | chr8_1:63101034-63101053 | Msa1206200:intron | 30.0% | |
| TGTTTCAGCTATTGTTTGAA+GGG | - | chr8_1:63101240-63101259 | Msa1206200:intron | 30.0% | |
| ! | AAACTACTTCCGACTTTTAA+AGG | + | chr8_1:63101354-63101373 | None:intergenic | 30.0% |
| !! | TTAAATCTTCTTTGGTGATG+TGG | + | chr8_1:63101407-63101426 | None:intergenic | 30.0% |
| ATGCTCCAAATTAACCAAAA+TGG | + | chr8_1:63101438-63101457 | None:intergenic | 30.0% | |
| AATGTCAAATGAACAGCTAA+TGG | - | chr8_1:63101475-63101494 | Msa1206200:intron | 30.0% | |
| GCAAATTATAAAATCACCAG+TGG | + | chr8_1:63101608-63101627 | None:intergenic | 30.0% | |
| GTAAAGCAAAGCATAATATG+TGG | + | chr8_1:63101670-63101689 | None:intergenic | 30.0% | |
| ! | TTTTTGTCAAACTGTTGTCT+TGG | - | chr8_1:63101797-63101816 | Msa1206200:intron | 30.0% |
| TTTAAATGAGAAGGAACTTG+CGG | + | chr8_1:63101914-63101933 | None:intergenic | 30.0% | |
| AATAAAAATCAAGGTTGGGA+AGG | + | chr8_1:63102000-63102019 | None:intergenic | 30.0% | |
| TCCAAGATATTGCTAAATCA+TGG | - | chr8_1:63102079-63102098 | Msa1206200:intron | 30.0% | |
| TCCATGATTTAGCAATATCT+TGG | + | chr8_1:63102083-63102102 | None:intergenic | 30.0% | |
| ATCATGGAATCAGTGAAATA+AGG | - | chr8_1:63102095-63102114 | Msa1206200:intron | 30.0% | |
| ! | AATAAGGATGAAAAAGTGTG+AGG | - | chr8_1:63102111-63102130 | Msa1206200:intron | 30.0% |
| ! | TGACACAATTTAAGACTACA+AGG | + | chr8_1:63102201-63102220 | None:intergenic | 30.0% |
| ATTCTGTTGTCTATTTCATG+TGG | - | chr8_1:63102415-63102434 | Msa1206200:intron | 30.0% | |
| CTATTTCATGTGGATAAAGA+TGG | - | chr8_1:63102425-63102444 | Msa1206200:intron | 30.0% | |
| TTGAACAATCTATTGCAGAA+GGG | + | chr8_1:63102480-63102499 | None:intergenic | 30.0% | |
| !!! | TTTTTCTTCGACTATTTCTG+GGG | + | chr8_1:63102576-63102595 | None:intergenic | 30.0% |
| CTATACTGAACAAAATGATG+TGG | + | chr8_1:63102760-63102779 | None:intergenic | 30.0% | |
| !!! | TTTTTTGGCTTGTTAACAGA+CGG | - | chr8_1:63103266-63103285 | Msa1206200:intron | 30.0% |
| ! | CTTCTTGAATCTAGTTTACA+AGG | + | chr8_1:63103384-63103403 | None:intergenic | 30.0% |
| !! | GTTGTTACATAATAGTGGAT+TGG | - | chr8_1:63103768-63103787 | Msa1206200:five_prime_UTR | 30.0% |
| !! | TTACATAATAGTGGATTGGT+TGG | - | chr8_1:63103772-63103791 | Msa1206200:five_prime_UTR | 30.0% |
| ATAATATTCTCTCATGCTTC+AGG | + | chr8_1:63103802-63103821 | None:intergenic | 30.0% | |
| AATAAATGCAGCACTCTGTT+TGG | - | chr8_1:63099079-63099098 | Msa1206200:three_prime_UTR | 35.0% | |
| ! | GACAACTGATCCATTTTCAA+CGG | + | chr8_1:63099240-63099259 | None:intergenic | 35.0% |
| GTTGAAAATGGATCAGTTGT+CGG | - | chr8_1:63099239-63099258 | Msa1206200:CDS | 35.0% | |
| TGAAGCGGAAATCAAAACAA+TGG | + | chr8_1:63099347-63099366 | None:intergenic | 35.0% | |
| CATGAGACAGAAATTTGAAG+CGG | + | chr8_1:63099362-63099381 | None:intergenic | 35.0% | |
| TCAGAAGCTGGAGAAAATTA+AGG | - | chr8_1:63099430-63099449 | Msa1206200:intron | 35.0% | |
| GAGAAAATGCGAGAATGTAA+AGG | - | chr8_1:63099491-63099510 | Msa1206200:intron | 35.0% | |
| !! | GACATGTTTGGATGTTTTAG+CGG | + | chr8_1:63099932-63099951 | None:intergenic | 35.0% |
| !! | GTTTGATTCCATTTTGGCAT+TGG | - | chr8_1:63100047-63100066 | Msa1206200:intron | 35.0% |
| AATTACCGTGATTAGTGGTT+TGG | - | chr8_1:63100094-63100113 | Msa1206200:CDS | 35.0% | |
| !!! | TTGTTGGGTCTGTTTTTTTC+AGG | - | chr8_1:63100142-63100161 | Msa1206200:CDS | 35.0% |
| ! | TAAAGAAGTCAAAGCTTTGG+AGG | - | chr8_1:63100182-63100201 | Msa1206200:intron | 35.0% |
| GAATGAGAAAAAGCAGTCAA+TGG | - | chr8_1:63100236-63100255 | Msa1206200:intron | 35.0% | |
| TAAGCGAATTGAACTCTTTG+AGG | - | chr8_1:63100580-63100599 | Msa1206200:intron | 35.0% | |
| AAGCGAATTGAACTCTTTGA+GGG | - | chr8_1:63100581-63100600 | Msa1206200:intron | 35.0% | |
| CTGTTTCAGCTATTGTTTGA+AGG | - | chr8_1:63101239-63101258 | Msa1206200:intron | 35.0% | |
| GTTTCAGCTATTGTTTGAAG+GGG | - | chr8_1:63101241-63101260 | Msa1206200:intron | 35.0% | |
| TTTCAGCTATTGTTTGAAGG+GGG | - | chr8_1:63101242-63101261 | Msa1206200:intron | 35.0% | |
| ! | AATGAACAGCTAATGGATCA+TGG | - | chr8_1:63101482-63101501 | Msa1206200:intron | 35.0% |
| ! | ATGAACAGCTAATGGATCAT+GGG | - | chr8_1:63101483-63101502 | Msa1206200:intron | 35.0% |
| TTTCCAAATACATAGACCAC+TGG | - | chr8_1:63101589-63101608 | Msa1206200:intron | 35.0% | |
| !! | GAGCTACAACATTTGCTTTT+AGG | + | chr8_1:63101648-63101667 | None:intergenic | 35.0% |
| TTGTTATCTAAACACCTCCT+TGG | - | chr8_1:63102226-63102245 | Msa1206200:CDS | 35.0% | |
| TGTTATCTAAACACCTCCTT+GGG | - | chr8_1:63102227-63102246 | Msa1206200:CDS | 35.0% | |
| ! | ATATTTTCCACATGTACCCA+AGG | + | chr8_1:63102246-63102265 | None:intergenic | 35.0% |
| CTTGAACAATCTATTGCAGA+AGG | + | chr8_1:63102481-63102500 | None:intergenic | 35.0% | |
| GCAATAGATTGTTCAAGACA+CGG | - | chr8_1:63102484-63102503 | Msa1206200:intron | 35.0% | |
| GTTCAAGACACGGTAAATAT+TGG | - | chr8_1:63102494-63102513 | Msa1206200:intron | 35.0% | |
| !! | TGATTTTGACATGGGTACTA+AGG | - | chr8_1:63102601-63102620 | Msa1206200:CDS | 35.0% |
| !! | GATTTTGACATGGGTACTAA+GGG | - | chr8_1:63102602-63102621 | Msa1206200:CDS | 35.0% |
| ! | TAACCTCTTCCTTTTGTAGA+CGG | - | chr8_1:63102628-63102647 | Msa1206200:CDS | 35.0% |
| TCATTTGTTCCGTCTACAAA+AGG | + | chr8_1:63102640-63102659 | None:intergenic | 35.0% | |
| AATTGGTCAAAGAAATCGGT+AGG | - | chr8_1:63102714-63102733 | Msa1206200:intron | 35.0% | |
| ! | CTTGCTCGCATTTTTGTAAT+AGG | - | chr8_1:63102815-63102834 | Msa1206200:intron | 35.0% |
| TGCTACTGACAAGTGTATTA+TGG | - | chr8_1:63102839-63102858 | Msa1206200:intron | 35.0% | |
| !! | TTACTTTTCCTCATCGTCAT+TGG | - | chr8_1:63102864-63102883 | Msa1206200:intron | 35.0% |
| GTGCTTCATGGTGAATTTAT+TGG | - | chr8_1:63102971-63102990 | Msa1206200:intron | 35.0% | |
| TAAGTAAACAAGGCACATCT+AGG | + | chr8_1:63102999-63103018 | None:intergenic | 35.0% | |
| !! | AGATGTGCCTTGTTTACTTA+TGG | - | chr8_1:63102999-63103018 | Msa1206200:intron | 35.0% |
| ! | TCTTTTTGTAAACACCACCT+TGG | - | chr8_1:63103348-63103367 | Msa1206200:CDS | 35.0% |
| TACAAGGTAAACTGAAACCA+AGG | + | chr8_1:63103368-63103387 | None:intergenic | 35.0% | |
| AGTGAAGATTGTGATGAATG+AGG | - | chr8_1:63103608-63103627 | Msa1206200:five_prime_UTR | 35.0% | |
| GTGAAGATTGTGATGAATGA+GGG | - | chr8_1:63103609-63103628 | Msa1206200:five_prime_UTR | 35.0% | |
| ! | TGAATGAGGGACAATTGTTT+TGG | - | chr8_1:63103622-63103641 | Msa1206200:five_prime_UTR | 35.0% |
| ! | GAATGAGGGACAATTGTTTT+GGG | - | chr8_1:63103623-63103642 | Msa1206200:five_prime_UTR | 35.0% |
| !! | CATATTGATTTGGTGCTCTT+TGG | - | chr8_1:63103687-63103706 | Msa1206200:five_prime_UTR | 35.0% |
| GCTAAACAAATGAATCCTCT+CGG | - | chr8_1:63103907-63103926 | Msa1206200:five_prime_UTR | 35.0% | |
| !! | TAGGAAATGGGTGATGGTTT+TGG | + | chr8_1:63098817-63098836 | None:intergenic | 40.0% |
| AGATCTGAATGAGGAAGGTT+TGG | + | chr8_1:63099176-63099195 | None:intergenic | 40.0% | |
| ! | ACCGTCAGATTTTGCACTAA+CGG | + | chr8_1:63099201-63099220 | None:intergenic | 40.0% |
| TAGATTCTTACGATAGAGCG+CGG | + | chr8_1:63099314-63099333 | None:intergenic | 40.0% | |
| AGCGGAAATCAAAACAATGG+AGG | + | chr8_1:63099344-63099363 | None:intergenic | 40.0% | |
| ! | CAGAAATGGATTTCAGAAGC+TGG | - | chr8_1:63099418-63099437 | Msa1206200:intron | 40.0% |
| ! | TCACATTTTCAACACGGATC+TGG | + | chr8_1:63099650-63099669 | None:intergenic | 40.0% |
| CCACTAATCACGGTAATTCA+TGG | + | chr8_1:63100092-63100111 | None:intergenic | 40.0% | |
| CCATGAATTACCGTGATTAG+TGG | - | chr8_1:63100089-63100108 | Msa1206200:intron | 40.0% | |
| AAGAGCCAAACCACTAATCA+CGG | + | chr8_1:63100102-63100121 | None:intergenic | 40.0% | |
| ! | TCATTTTGTTCTTGCTCGAG+TGG | - | chr8_1:63100481-63100500 | Msa1206200:intron | 40.0% |
| TCTGCATTGCATTGAAACAC+AGG | + | chr8_1:63100540-63100559 | None:intergenic | 40.0% | |
| AGCGAATTGAACTCTTTGAG+GGG | - | chr8_1:63100582-63100601 | Msa1206200:intron | 40.0% | |
| TCTTCTGTGTCACCTTCATT+GGG | + | chr8_1:63100608-63100627 | None:intergenic | 40.0% | |
| TTCTTCTGTGTCACCTTCAT+TGG | + | chr8_1:63100609-63100628 | None:intergenic | 40.0% | |
| ! | GAAAATGTCTTGCTAGCTTC+CGG | - | chr8_1:63100626-63100645 | Msa1206200:intron | 40.0% |
| ! | TAACAAGAAGGTAGAAGCAC+AGG | + | chr8_1:63100833-63100852 | None:intergenic | 40.0% |
| TGCTTGATTTATACGACTCG+TGG | - | chr8_1:63100853-63100872 | Msa1206200:intron | 40.0% | |
| ATGCAATCTAGTAGGAAGCA+TGG | - | chr8_1:63100929-63100948 | Msa1206200:intron | 40.0% | |
| AAATATGACTGTATGAGCGG+AGG | - | chr8_1:63100958-63100977 | Msa1206200:intron | 40.0% | |
| TGACTTTCACTGAAACATCG+AGG | + | chr8_1:63100987-63101006 | None:intergenic | 40.0% | |
| ! | AGATCATAGAAGTGCGAGAA+AGG | + | chr8_1:63101133-63101152 | None:intergenic | 40.0% |
| ! | GGCTGTCAACCTTTAAAAGT+CGG | - | chr8_1:63101342-63101361 | Msa1206200:intron | 40.0% |
| ! | AGCTAATGGATCATGGGAAT+CGG | - | chr8_1:63101489-63101508 | Msa1206200:intron | 40.0% |
| TCACCAGTGGTCTATGTATT+TGG | + | chr8_1:63101595-63101614 | None:intergenic | 40.0% | |
| ACGGAAGTAAAATGACGAGA+CGG | + | chr8_1:63101861-63101880 | None:intergenic | 40.0% | |
| ! | GATGAAAAAGTGTGAGGAAG+TGG | - | chr8_1:63102117-63102136 | Msa1206200:intron | 40.0% |
| ACTGTCCATCAAACTTCTAG+AGG | + | chr8_1:63102330-63102349 | None:intergenic | 40.0% | |
| ! | TCTAGAAGTTTGATGGACAG+TGG | - | chr8_1:63102329-63102348 | Msa1206200:intron | 40.0% |
| ATCTATTGCAGAAGGGTTCA+TGG | + | chr8_1:63102473-63102492 | None:intergenic | 40.0% | |
| CAATTACTCCAATGACGATG+AGG | + | chr8_1:63102875-63102894 | None:intergenic | 40.0% | |
| TGAAGCACAGCAACAATAGA+TGG | + | chr8_1:63102959-63102978 | None:intergenic | 40.0% | |
| TCTATTGTTGCTGTGCTTCA+TGG | - | chr8_1:63102959-63102978 | Msa1206200:intron | 40.0% | |
| ! | TCACTAGGCATAGCTTTTGA+TGG | - | chr8_1:63103123-63103142 | Msa1206200:intron | 40.0% |
| AAGGTAAACTGAAACCAAGG+TGG | + | chr8_1:63103365-63103384 | None:intergenic | 40.0% | |
| CTTCTGTTATTCGTGACAAC+AGG | + | chr8_1:63103558-63103577 | None:intergenic | 40.0% | |
| CGAATAACAGAAGACTGCTT+TGG | - | chr8_1:63103565-63103584 | Msa1206200:CDS | 40.0% | |
| !!! | TTGTTTTGGGAACAGACACA+AGG | - | chr8_1:63103636-63103655 | Msa1206200:five_prime_UTR | 40.0% |
| !! | TTTGGTGCTCTTTGGTTTGA+TGG | - | chr8_1:63103695-63103714 | Msa1206200:five_prime_UTR | 40.0% |
| CAAACAACAAACAATCCGAG+AGG | + | chr8_1:63103925-63103944 | None:intergenic | 40.0% | |
| !! | CTAACGTGTTGACTCGTGTA+TGG | + | chr8_1:63098787-63098806 | None:intergenic | 45.0% |
| CGACTATAGGAAATGGGTGA+TGG | + | chr8_1:63098823-63098842 | None:intergenic | 45.0% | |
| ! | AAGGGATCAAAAGCGCGTTT+AGG | + | chr8_1:63099057-63099076 | None:intergenic | 45.0% |
| GCCGTTAGTGCAAAATCTGA+CGG | - | chr8_1:63099197-63099216 | Msa1206200:three_prime_UTR | 45.0% | |
| AGTGCAAAATCTGACGGTTG+AGG | - | chr8_1:63099203-63099222 | Msa1206200:three_prime_UTR | 45.0% | |
| GAGTAGAAAGAGCAGGCAAT+TGG | - | chr8_1:63099457-63099476 | Msa1206200:intron | 45.0% | |
| GTGTGCTTCCAATGCCAAAA+TGG | + | chr8_1:63100058-63100077 | None:intergenic | 45.0% | |
| GAAGAAGCCAGTGTACTTAC+CGG | + | chr8_1:63100648-63100667 | None:intergenic | 45.0% | |
| ACACAGATCAAGCCATTGAG+AGG | - | chr8_1:63101522-63101541 | Msa1206200:intron | 45.0% | |
| CACAGATCAAGCCATTGAGA+GGG | - | chr8_1:63101523-63101542 | Msa1206200:intron | 45.0% | |
| ACAGATCAAGCCATTGAGAG+GGG | - | chr8_1:63101524-63101543 | Msa1206200:intron | 45.0% | |
| AAGCCATTGAGAGGGGAAAA+AGG | - | chr8_1:63101531-63101550 | Msa1206200:intron | 45.0% | |
| AGCCATTGAGAGGGGAAAAA+GGG | - | chr8_1:63101532-63101551 | Msa1206200:intron | 45.0% | |
| ! | AACCCTTTTTCCCCTCTCAA+TGG | + | chr8_1:63101537-63101556 | None:intergenic | 45.0% |
| ATTGAGAGGGGAAAAAGGGT+TGG | - | chr8_1:63101536-63101555 | Msa1206200:intron | 45.0% | |
| ! | TTTTCCACATGTACCCAAGG+AGG | + | chr8_1:63102243-63102262 | None:intergenic | 45.0% |
| GGGAACATGGAGTTCAATTG+TGG | + | chr8_1:63102301-63102320 | None:intergenic | 45.0% | |
| ! | CAAACTTCTAGAGGAGGAGA+GGG | + | chr8_1:63102321-63102340 | None:intergenic | 45.0% |
| ! | TCAAACTTCTAGAGGAGGAG+AGG | + | chr8_1:63102322-63102341 | None:intergenic | 45.0% |
| ! | CTCCTCCTCTAGAAGTTTGA+TGG | - | chr8_1:63102322-63102341 | Msa1206200:intron | 45.0% |
| ! | GTCCATCAAACTTCTAGAGG+AGG | + | chr8_1:63102327-63102346 | None:intergenic | 45.0% |
| GTTCCGTCTACAAAAGGAAG+AGG | + | chr8_1:63102634-63102653 | None:intergenic | 45.0% | |
| GTAAATTGCTCGACAACACG+TGG | - | chr8_1:63103021-63103040 | Msa1206200:intron | 45.0% | |
| !! | AGTGGACGGGTTCTTTTTCA+TGG | + | chr8_1:63103098-63103117 | None:intergenic | 45.0% |
| CTATGCCTAGTGAAGACTAG+TGG | + | chr8_1:63103116-63103135 | None:intergenic | 45.0% | |
| GTTAACAGACGGTCAAGATC+AGG | - | chr8_1:63103277-63103296 | Msa1206200:intron | 45.0% | |
| GCTTGTACATCCAGAGAACA+AGG | - | chr8_1:63103503-63103522 | Msa1206200:intron | 45.0% | |
| CTGTTATTCGTGACAACAGG+AGG | + | chr8_1:63103555-63103574 | None:intergenic | 45.0% | |
| !! | TGGTTTGATGGCGATGACAA+TGG | - | chr8_1:63103707-63103726 | Msa1206200:five_prime_UTR | 45.0% |
| CTAACGGCGAGATCTGAATG+AGG | + | chr8_1:63099185-63099204 | None:intergenic | 50.0% | |
| CGATAGAGCGCGGAAATTGT+CGG | + | chr8_1:63099304-63099323 | None:intergenic | 50.0% | |
| AGGATGCGAGTAGAAAGAGC+AGG | - | chr8_1:63099450-63099469 | Msa1206200:intron | 50.0% | |
| CTAGCTTCCGGTAAGTACAC+TGG | - | chr8_1:63100638-63100657 | Msa1206200:intron | 50.0% | |
| AGCTATTGTTTGAAGGGGGC+TGG | - | chr8_1:63101246-63101265 | Msa1206200:intron | 50.0% | |
| GGATCATGGGAATCGGATGA+TGG | - | chr8_1:63101496-63101515 | Msa1206200:intron | 50.0% | |
| GGTTGGGAAGGTGATGTTTC+AGG | + | chr8_1:63101988-63102007 | None:intergenic | 50.0% | |
| ATCTTGGAGAGCAGACAGAG+AGG | + | chr8_1:63102067-63102086 | None:intergenic | 50.0% | |
| AACACCTCCTTGGGTACATG+TGG | - | chr8_1:63102236-63102255 | Msa1206200:CDS | 50.0% | |
| TGAGACTGCTGCAGCTCTTA+AGG | - | chr8_1:63102520-63102539 | Msa1206200:intron | 50.0% | |
| GAGCAGAGTTGTCAATGAGC+TGG | - | chr8_1:63102658-63102677 | Msa1206200:intron | 50.0% | |
| ! | CCTAGTGAAGACTAGTGGAC+GGG | + | chr8_1:63103111-63103130 | None:intergenic | 50.0% |
| GCCTAGTGAAGACTAGTGGA+CGG | + | chr8_1:63103112-63103131 | None:intergenic | 50.0% | |
| TCGCGAATGTCCTTGTTCTC+TGG | + | chr8_1:63103516-63103535 | None:intergenic | 50.0% | |
| AAGGACATTCGCGACATTCC+AGG | - | chr8_1:63103522-63103541 | Msa1206200:CDS | 50.0% | |
| ACAACAGGAGGAGCTAATCC+TGG | + | chr8_1:63103543-63103562 | None:intergenic | 50.0% | |
| CGGCGAGATCTGAATGAGGA+AGG | + | chr8_1:63099181-63099200 | None:intergenic | 55.0% | |
| ! | CTCTTTGAGGGGCCCAATGA+AGG | - | chr8_1:63100593-63100612 | Msa1206200:intron | 55.0% |
| AGCAGACAGAGAGGACGTTG+TGG | + | chr8_1:63102058-63102077 | None:intergenic | 55.0% | |
| CTAGAGGAGGAGAGGGAACA+TGG | + | chr8_1:63102314-63102333 | None:intergenic | 55.0% | |
| TGCTGCAGCTCTTAAGGCAC+AGG | - | chr8_1:63102526-63102545 | Msa1206200:intron | 55.0% | |
| !! | CCCGTCCACTAGTCTTCACT+AGG | - | chr8_1:63103108-63103127 | Msa1206200:intron | 55.0% |
| TCAGTTGTCGGCGATCAGCG+AGG | - | chr8_1:63099251-63099270 | Msa1206200:CDS | 60.0% | |
| GAGGATCTGGCGGAGATCGA+CGG | - | chr8_1:63099270-63099289 | Msa1206200:CDS | 60.0% | |
| GTCGGCGATCAGCGAGGATC+TGG | - | chr8_1:63099257-63099276 | Msa1206200:CDS | 65.0% | |
| GGCGATCAGCGAGGATCTGG+CGG | - | chr8_1:63099260-63099279 | Msa1206200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 63098741 | 63104091 | 63098741 | ID=Msa1206200;Name=Msa1206200 |
| chr8_1 | mRNA | 63098741 | 63104091 | 63098741 | ID=Msa1206200-mRNA-1;Parent=Msa1206200;Name=Msa1206200-mRNA-1;_AED=0.08;_eAED=0.08;_QI=505|1|1|1|1|1|10|492|263 |
| chr8_1 | exon | 63098741 | 63099328 | 63098741 | ID=Msa1206200-mRNA-1:exon:20452;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63099921 | 63099995 | 63099921 | ID=Msa1206200-mRNA-1:exon:20451;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63100093 | 63100185 | 63100093 | ID=Msa1206200-mRNA-1:exon:20450;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63100285 | 63100341 | 63100285 | ID=Msa1206200-mRNA-1:exon:20449;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63101279 | 63101358 | 63101279 | ID=Msa1206200-mRNA-1:exon:20448;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63102185 | 63102273 | 63102185 | ID=Msa1206200-mRNA-1:exon:20447;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63102386 | 63102423 | 63102386 | ID=Msa1206200-mRNA-1:exon:20446;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63102575 | 63102668 | 63102575 | ID=Msa1206200-mRNA-1:exon:20445;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63103319 | 63103411 | 63103319 | ID=Msa1206200-mRNA-1:exon:20444;Parent=Msa1206200-mRNA-1 |
| chr8_1 | exon | 63103510 | 63104091 | 63103510 | ID=Msa1206200-mRNA-1:exon:20443;Parent=Msa1206200-mRNA-1 |
| chr8_1 | five_prime_UTR | 63103587 | 63104091 | 63103587 | ID=Msa1206200-mRNA-1:five_prime_utr;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63103510 | 63103586 | 63103510 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63103319 | 63103411 | 63103319 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63102575 | 63102668 | 63102575 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63102386 | 63102423 | 63102386 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63102185 | 63102273 | 63102185 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63101279 | 63101358 | 63101279 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63100285 | 63100341 | 63100285 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63100093 | 63100185 | 63100093 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63099921 | 63099995 | 63099921 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | CDS | 63099233 | 63099328 | 63099233 | ID=Msa1206200-mRNA-1:cds;Parent=Msa1206200-mRNA-1 |
| chr8_1 | three_prime_UTR | 63098741 | 63099232 | 63098741 | ID=Msa1206200-mRNA-1:three_prime_utr;Parent=Msa1206200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
