Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297970 | XP_013457561.1 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297970 | sp|Q944A9|NPS11_ARATH | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 3.12e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297970 | A0A072UPG8 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001680 | Msa1297970 | 0.830615 | 2.658146e-55 | -8.615850e-47 |
| Msa0012940 | Msa1297970 | 0.821695 | 3.521279e-53 | -8.615850e-47 |
| Msa0024710 | Msa1297970 | 0.805318 | 1.414594e-49 | -8.615850e-47 |
| Msa0052610 | Msa1297970 | 0.816681 | 4.879472e-52 | -8.615850e-47 |
| Msa0052870 | Msa1297970 | 0.804788 | 1.825973e-49 | -8.615850e-47 |
| Msa0075300 | Msa1297970 | 0.806268 | 8.934615e-50 | -8.615850e-47 |
| Msa0077340 | Msa1297970 | 0.811646 | 6.308704e-51 | -8.615850e-47 |
| Msa0081520 | Msa1297970 | 0.813605 | 2.352610e-51 | -8.615850e-47 |
| Msa0093850 | Msa1297970 | 0.835919 | 1.267334e-56 | -8.615850e-47 |
| Msa0098470 | Msa1297970 | 0.852599 | 4.152626e-61 | -8.615850e-47 |
| Msa0099230 | Msa1297970 | 0.850678 | 1.453416e-60 | -8.615850e-47 |
| Msa0103240 | Msa1297970 | 0.805639 | 1.211391e-49 | -8.615850e-47 |
| Msa0106320 | Msa1297970 | 0.851774 | 7.128099e-61 | -8.615850e-47 |
| Msa0626450 | Msa1297970 | 0.805869 | 1.083614e-49 | -8.615850e-47 |
| Msa0626490 | Msa1297970 | 0.811751 | 5.985305e-51 | -8.615850e-47 |
| Msa0638480 | Msa1297970 | 0.805772 | 1.135866e-49 | -8.615850e-47 |
| Msa0651550 | Msa1297970 | 0.801582 | 8.413791e-49 | -8.615850e-47 |
| Msa0652000 | Msa1297970 | 0.815218 | 1.034575e-51 | -8.615850e-47 |
| Msa0660370 | Msa1297970 | 0.843116 | 1.707587e-58 | -8.615850e-47 |
| Msa0664600 | Msa1297970 | 0.809494 | 1.840358e-50 | -8.615850e-47 |
| Msa0681260 | Msa1297970 | 0.811654 | 6.285200e-51 | -8.615850e-47 |
| Msa0681280 | Msa1297970 | 0.817822 | 2.701076e-52 | -8.615850e-47 |
| Msa0693330 | Msa1297970 | 0.803681 | 3.104739e-49 | -8.615850e-47 |
| Msa0711400 | Msa1297970 | 0.843338 | 1.489784e-58 | -8.615850e-47 |
| Msa0719400 | Msa1297970 | 0.801934 | 7.122154e-49 | -8.615850e-47 |
| Msa0780930 | Msa1297970 | 0.808280 | 3.346847e-50 | -8.615850e-47 |
| Msa0810930 | Msa1297970 | 0.821148 | 4.710038e-53 | -8.615850e-47 |
| Msa0833530 | Msa1297970 | 0.823161 | 1.607469e-53 | -8.615850e-47 |
| Msa0130110 | Msa1297970 | 0.817708 | 2.866822e-52 | -8.615850e-47 |
| Msa0136650 | Msa1297970 | 0.803105 | 4.085846e-49 | -8.615850e-47 |
| Msa0138360 | Msa1297970 | 0.811378 | 7.212992e-51 | -8.615850e-47 |
| Msa0148010 | Msa1297970 | 0.809637 | 1.714526e-50 | -8.615850e-47 |
| Msa0152870 | Msa1297970 | 0.847520 | 1.097704e-59 | -8.615850e-47 |
| Msa0166460 | Msa1297970 | 0.806640 | 7.458315e-50 | -8.615850e-47 |
| Msa0173890 | Msa1297970 | 0.821160 | 4.680336e-53 | -8.615850e-47 |
| Msa0174450 | Msa1297970 | 0.805380 | 1.373094e-49 | -8.615850e-47 |
| Msa0192480 | Msa1297970 | 0.827379 | 1.616163e-54 | -8.615850e-47 |
| Msa0209140 | Msa1297970 | 0.800613 | 1.327264e-48 | -8.615850e-47 |
| Msa0221000 | Msa1297970 | 0.818024 | 2.432218e-52 | -8.615850e-47 |
| Msa0223230 | Msa1297970 | 0.833023 | 6.767166e-56 | -8.615850e-47 |
| Msa0231630 | Msa1297970 | 0.821529 | 3.847007e-53 | -8.615850e-47 |
| Msa0238660 | Msa1297970 | 0.823982 | 1.032780e-53 | -8.615850e-47 |
| Msa1256850 | Msa1297970 | 0.913498 | 5.738935e-84 | -8.615850e-47 |
| Msa1266810 | Msa1297970 | 0.814511 | 1.484229e-51 | -8.615850e-47 |
| Msa1297970 | Msa1305280 | 0.843062 | 1.765008e-58 | -8.615850e-47 |
| Msa1297970 | Msa1306640 | 0.832523 | 9.006769e-56 | -8.615850e-47 |
| Msa1297970 | Msa1348090 | 0.814218 | 1.723320e-51 | -8.615850e-47 |
| Msa1297970 | Msa1371520 | 0.817567 | 3.083660e-52 | -8.615850e-47 |
| Msa1297970 | Msa1371910 | 0.858477 | 8.022213e-63 | -8.615850e-47 |
| Msa1297970 | Msa1373820 | 0.839072 | 1.971838e-57 | -8.615850e-47 |
| Msa1297970 | Msa1375280 | 0.840862 | 6.732508e-58 | -8.615850e-47 |
| Msa1297970 | Msa1385110 | 0.822747 | 2.007112e-53 | -8.615850e-47 |
| Msa1297970 | Msa1412000 | 0.809540 | 1.799561e-50 | -8.615850e-47 |
| Msa1297970 | Msa1414390 | 0.823381 | 1.428576e-53 | -8.615850e-47 |
| Msa1297970 | Msa1418240 | 0.800843 | 1.191618e-48 | -8.615850e-47 |
| Msa1297970 | Msa1427110 | 0.844328 | 8.094610e-59 | -8.615850e-47 |
| Msa1297970 | Msa1432500 | 0.802732 | 4.878770e-49 | -8.615850e-47 |
| Msa1297970 | Msa1432920 | 0.832690 | 8.183778e-56 | -8.615850e-47 |
| Msa1297970 | Msa1437940 | 0.814764 | 1.304878e-51 | -8.615850e-47 |
| Msa1297970 | Msa1440960 | 0.800187 | 1.620834e-48 | -8.615850e-47 |
| Msa1297970 | Msa1459460 | 0.808985 | 2.366544e-50 | -8.615850e-47 |
| Msa0375640 | Msa1297970 | 0.811591 | 6.484833e-51 | -8.615850e-47 |
| Msa0378720 | Msa1297970 | 0.811582 | 6.513508e-51 | -8.615850e-47 |
| Msa0417970 | Msa1297970 | 0.801606 | 8.316856e-49 | -8.615850e-47 |
| Msa0424160 | Msa1297970 | 0.821119 | 4.782608e-53 | -8.615850e-47 |
| Msa0430260 | Msa1297970 | 0.811144 | 8.108496e-51 | -8.615850e-47 |
| Msa0435370 | Msa1297970 | 0.838124 | 3.464304e-57 | -8.615850e-47 |
| Msa0435420 | Msa1297970 | 0.841928 | 3.527835e-58 | -8.615850e-47 |
| Msa0435570 | Msa1297970 | 0.842996 | 1.838296e-58 | -8.615850e-47 |
| Msa0474730 | Msa1297970 | 0.812080 | 5.076045e-51 | -8.615850e-47 |
| Msa0479200 | Msa1297970 | 0.807742 | 4.357380e-50 | -8.615850e-47 |
| Msa0982650 | Msa1297970 | 0.841996 | 3.386100e-58 | -8.615850e-47 |
| Msa1072940 | Msa1297970 | 0.821511 | 3.884415e-53 | -8.615850e-47 |
| Msa1076560 | Msa1297970 | 0.842509 | 2.476171e-58 | -8.615850e-47 |
| Msa1079230 | Msa1297970 | 0.819049 | 1.424268e-52 | -8.615850e-47 |
| Msa1085330 | Msa1297970 | 0.804484 | 2.113190e-49 | -8.615850e-47 |
| Msa0249540 | Msa1297970 | 0.807740 | 4.361358e-50 | -8.615850e-47 |
| Msa0276380 | Msa1297970 | 0.825627 | 4.227678e-54 | -8.615850e-47 |
| Msa0281470 | Msa1297970 | 0.840794 | 7.014732e-58 | -8.615850e-47 |
| Msa0307270 | Msa1297970 | 0.847102 | 1.429596e-59 | -8.615850e-47 |
| Msa0307570 | Msa1297970 | 0.805332 | 1.404745e-49 | -8.615850e-47 |
| Msa0341690 | Msa1297970 | 0.830642 | 2.618261e-55 | -8.615850e-47 |
| Msa1145240 | Msa1297970 | 0.810752 | 9.857423e-51 | -8.615850e-47 |
| Msa1160920 | Msa1297970 | 0.812439 | 4.237687e-51 | -8.615850e-47 |
| Msa1168950 | Msa1297970 | 0.807522 | 4.851165e-50 | -8.615850e-47 |
| Msa1169040 | Msa1297970 | 0.824239 | 8.990644e-54 | -8.615850e-47 |
| Msa1206200 | Msa1297970 | 0.806630 | 7.492919e-50 | -8.615850e-47 |
| Msa1206230 | Msa1297970 | 0.991436 | 1.227968e-187 | -8.615850e-47 |
| Msa0500380 | Msa1297970 | 0.814626 | 1.399576e-51 | -8.615850e-47 |
| Msa0515800 | Msa1297970 | 0.809690 | 1.670085e-50 | -8.615850e-47 |
| Msa0518030 | Msa1297970 | 0.813798 | 2.132410e-51 | -8.615850e-47 |
| Msa0519760 | Msa1297970 | 0.835140 | 1.994880e-56 | -8.615850e-47 |
| Msa0519810 | Msa1297970 | 0.840797 | 7.001412e-58 | -8.615850e-47 |
| Msa0519840 | Msa1297970 | 0.842838 | 2.024428e-58 | -8.615850e-47 |
| Msa0527190 | Msa1297970 | 0.804901 | 1.729278e-49 | -8.615850e-47 |
| Msa0581690 | Msa1297970 | 0.803429 | 3.500565e-49 | -8.615850e-47 |
| Msa0880270 | Msa1297970 | 0.840086 | 1.074699e-57 | -8.615850e-47 |
| Msa0902360 | Msa1297970 | 0.817911 | 2.579210e-52 | -8.615850e-47 |
| Msa0937020 | Msa1297970 | 0.805734 | 1.157128e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297970 | MtrunA17_Chr4g0055321 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 533 |
| Msa1297970 | MtrunA17_Chr2g0302561 | 65.370 | 257 | 84 | 2 | 7 | 260 | 7 | 261 | 1.89e-110 | 319 |
| Msa1297970 | MtrunA17_Chr4g0069271 | 64.202 | 257 | 87 | 2 | 7 | 260 | 7 | 261 | 2.16e-105 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297970 | AT2G35190.1 | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 3.17e-135 | 382 |
| Msa1297970 | AT3G17440.1 | 63.953 | 258 | 87 | 2 | 7 | 260 | 7 | 262 | 1.15e-107 | 313 |
| Msa1297970 | AT1G48240.1 | 63.178 | 258 | 89 | 2 | 7 | 260 | 7 | 262 | 4.48e-106 | 308 |
| Msa1297970 | AT1G48240.2 | 63.380 | 213 | 72 | 2 | 52 | 260 | 1 | 211 | 3.26e-84 | 251 |
| Msa1297970 | AT3G17440.2 | 61.353 | 207 | 76 | 1 | 7 | 209 | 7 | 213 | 4.33e-84 | 251 |
Find 73 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGCTCTCTCATGTTTC+AGG | 0.237882 | 8_3:+58631046 | None:intergenic |
| TAAATGAGGGACAATTGTTT+TGG | 0.239837 | 8_3:-58631223 | Msa1297970:three_prime_UTR |
| TTCTTCTGTGTCGCCTTCAT+TGG | 0.242708 | 8_3:+58634141 | None:intergenic |
| TGATTGATTACCGTTGAAAA+TGG | 0.262568 | 8_3:-58635535 | Msa1297970:exon |
| TCAGAAGCTGGAGAAAATTA+AGG | 0.285108 | 8_3:-58635331 | Msa1297970:CDS |
| AAGCCATTGAGAGGGGAAAA+AGG | 0.306993 | 8_3:-58633280 | Msa1297970:CDS |
| GTTCAAGACACGGTAAATAT+TGG | 0.323026 | 8_3:-58632361 | Msa1297970:CDS |
| TATAAAGAAAGCATCTAAAT+TGG | 0.326069 | 8_3:-58632157 | Msa1297970:CDS |
| TAAAGAAGTCAAAGCTTTAG+AGG | 0.333294 | 8_3:-58634566 | Msa1297970:CDS |
| TGCTACTGACAAGTGTATTA+TGG | 0.366980 | 8_3:-58632015 | Msa1297970:CDS |
| CTTCTGTTGTTCGTGACAAC+AGG | 0.367521 | 8_3:+58631296 | None:intergenic |
| AATAAATGCAGCACTCTGTT+TGG | 0.387247 | 8_3:-58635683 | Msa1297970:five_prime_UTR |
| AAGGGATCAAAAGCGCGTTT+AGG | 0.389328 | 8_3:+58635708 | None:intergenic |
| AAGGACATTCGCGACATTCC+AGG | 0.392891 | 8_3:-58631329 | Msa1297970:CDS |
| AGATCTGAATGAGGAAGGTT+TGG | 0.393793 | 8_3:+58635589 | None:intergenic |
| TGAGACTGCTGCAGCTCTTA+AGG | 0.393912 | 8_3:-58632335 | Msa1297970:CDS |
| TCGCGAATGTCCTTGTTCTC+TGG | 0.411929 | 8_3:+58631338 | None:intergenic |
| TCTTCTGTGTCGCCTTCATT+GGG | 0.414766 | 8_3:+58634142 | None:intergenic |
| TCTAAATTGGTCAAGGAAAT+CGG | 0.417319 | 8_3:-58632144 | Msa1297970:CDS |
| TAAGCGAATTGAACTCTTTG+AGG | 0.435458 | 8_3:-58634167 | Msa1297970:CDS |
| AAGAATAAACAAAACATTGT+TGG | 0.436069 | 8_3:+58635787 | None:intergenic |
| AATGTCAAATGAACAGCTAA+TGG | 0.436817 | 8_3:-58633336 | Msa1297970:CDS |
| ATTGTGTTGTTACATAATAG+TGG | 0.440547 | 8_3:-58631082 | Msa1297970:three_prime_UTR |
| GAAAATGTCTTGCTAGCTTC+CGG | 0.447441 | 8_3:-58634121 | Msa1297970:intron |
| AGAATAAACAAAACATTGTT+GGG | 0.455034 | 8_3:+58635788 | None:intergenic |
| AATGAACAGCTAATGGATCA+TGG | 0.468547 | 8_3:-58633329 | Msa1297970:CDS |
| AGAAAATGCGAGAGTGTAAA+GGG | 0.476625 | 8_3:-58635269 | Msa1297970:intron |
| CGATAGAGCGCGGAAATTGT+CGG | 0.478777 | 8_3:+58635461 | None:intergenic |
| CGAACAACAGAAGACTGCTT+TGG | 0.487369 | 8_3:-58631286 | Msa1297970:CDS |
| AGCTAATGGATCATGGGAAT+CGG | 0.490306 | 8_3:-58633322 | Msa1297970:CDS |
| AATTGCTATCATTATTGTAA+AGG | 0.494738 | 8_3:-58631964 | Msa1297970:intron |
| GAGAAAATGCGAGAGTGTAA+AGG | 0.497667 | 8_3:-58635270 | Msa1297970:CDS |
| AAGCGAATTGAACTCTTTGA+GGG | 0.501546 | 8_3:-58634166 | Msa1297970:CDS |
| CTCTTTGAGGGACCCAATGA+AGG | 0.509954 | 8_3:-58634154 | Msa1297970:CDS |
| GATTATTGGATTCTGTAATG+TGG | 0.515607 | 8_3:+58635641 | None:intergenic |
| CAGAAATGGATTTCAGAAGC+TGG | 0.516653 | 8_3:-58635343 | Msa1297970:CDS |
| AGTGCAAAATCTGACGGTTG+AGG | 0.520924 | 8_3:-58635559 | Msa1297970:five_prime_UTR |
| ACAACAGGAGGAGCTAATCC+TGG | 0.528610 | 8_3:+58631311 | None:intergenic |
| GAGTAGAAAGAGCAGGCAAT+TGG | 0.528613 | 8_3:-58635304 | Msa1297970:CDS |
| GAGCAGAGTTGTCAATGAGC+TGG | 0.530134 | 8_3:-58632196 | Msa1297970:CDS |
| TGCTGCAGCTCTTAAGGCAC+AGG | 0.531146 | 8_3:-58632329 | Msa1297970:intron |
| ATGAACAGCTAATGGATCAT+GGG | 0.537163 | 8_3:-58633328 | Msa1297970:CDS |
| GTTGAAAATGGATCAGTTGT+CGG | 0.540328 | 8_3:-58635523 | Msa1297970:exon |
| GGTCAAGGAAATCGGTAGGC+AGG | 0.545431 | 8_3:-58632136 | Msa1297970:intron |
| GTTGTTACATAATAGTGGAT+TGG | 0.547648 | 8_3:-58631077 | Msa1297970:three_prime_UTR |
| GATTGTGATGAACTTAAATG+AGG | 0.550199 | 8_3:-58631237 | Msa1297970:three_prime_UTR |
| GAGGATCTGGCGGAGATCGA+CGG | 0.558067 | 8_3:-58635492 | Msa1297970:CDS |
| GGATCATGGGAATCGGATGA+TGG | 0.561416 | 8_3:-58633315 | Msa1297970:CDS |
| GCTAAACAAACGAATCCTCT+CGG | 0.574048 | 8_3:-58630938 | Msa1297970:three_prime_UTR |
| GAAAGCATCTAAATTGGTCA+AGG | 0.580083 | 8_3:-58632151 | Msa1297970:CDS |
| TAAACAAAACATTGTTGGGT+CGG | 0.582811 | 8_3:+58635792 | None:intergenic |
| ACACAGATCAAGCCATTGAG+AGG | 0.592198 | 8_3:-58633289 | Msa1297970:CDS |
| ATTGTGATGAACTTAAATGA+GGG | 0.593340 | 8_3:-58631236 | Msa1297970:three_prime_UTR |
| CGGCGAGATCTGAATGAGGA+AGG | 0.595127 | 8_3:+58635584 | None:intergenic |
| CACAGATCAAGCCATTGAGA+GGG | 0.597880 | 8_3:-58633288 | Msa1297970:CDS |
| CTGTTGTTCGTGACAACAGG+AGG | 0.605031 | 8_3:+58631299 | None:intergenic |
| GGCGATCAGCGAGGATCTGG+CGG | 0.606362 | 8_3:-58635502 | Msa1297970:CDS |
| GTCAATCTTGTAATATACAG+CGG | 0.611557 | 8_3:-58630893 | Msa1297970:three_prime_UTR |
| GCCGTTAGTGCAAAATCTGA+CGG | 0.619243 | 8_3:-58635565 | Msa1297970:five_prime_UTR |
| TGGTTTGACGGCGATGACAA+TGG | 0.620641 | 8_3:-58631138 | Msa1297970:three_prime_UTR |
| ATATCAAGAATCAAATCAAG+CGG | 0.623736 | 8_3:-58635926 | None:intergenic |
| GCTTGTACATCCAGAGAACA+AGG | 0.635136 | 8_3:-58631348 | Msa1297970:CDS |
| AGGATGCGAGTAGAAAGAGC+AGG | 0.636628 | 8_3:-58635311 | Msa1297970:CDS |
| AATTGGTCAAGGAAATCGGT+AGG | 0.642065 | 8_3:-58632140 | Msa1297970:CDS |
| GCAATAGATTGTTCAAGACA+CGG | 0.645457 | 8_3:-58632371 | Msa1297970:intron |
| ACTAATAATCACGATTCACG+AGG | 0.655655 | 8_3:-58635837 | Msa1297970:five_prime_UTR |
| TAGATTCTTACGATAGAGCG+CGG | 0.658099 | 8_3:+58635451 | None:intergenic |
| CTAACGGCGAGATCTGAATG+AGG | 0.662619 | 8_3:+58635580 | None:intergenic |
| CAATTACTCCAATGACGATG+AGG | 0.668385 | 8_3:+58631982 | None:intergenic |
| ACAGATCAAGCCATTGAGAG+GGG | 0.669219 | 8_3:-58633287 | Msa1297970:CDS |
| CTAATAATCACGATTCACGA+GGG | 0.723400 | 8_3:-58635836 | Msa1297970:five_prime_UTR |
| TCAGTTGTCGGCGATCAGCG+AGG | 0.738571 | 8_3:-58635511 | Msa1297970:CDS |
| CAAACAACAAACAATCCGAG+AGG | 0.740636 | 8_3:+58630923 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTTTAGTATTTT+TGG | + | chr8_3:58630810-58630829 | None:intergenic | 10.0% |
| !!! | GATTTTATAATGTAGATTAT+TGG | + | chr8_3:58631070-58631089 | None:intergenic | 15.0% |
| !! | TGATTGTATAAAATTTATTC+TGG | - | chr8_3:58631667-58631686 | Msa1297970:intron | 15.0% |
| !!! | CTGTTTTCAATAATTTTAAA+AGG | - | chr8_3:58631964-58631983 | Msa1297970:intron | 15.0% |
| !! | CACTTTATATTTAGTAATTT+AGG | - | chr8_3:58632713-58632732 | Msa1297970:intron | 15.0% |
| !!! | AAAAAGTATGTATGTAAAAA+AGG | + | chr8_3:58633049-58633068 | None:intergenic | 15.0% |
| !! | TTAATATTAAAAGCAGAAAT+AGG | + | chr8_3:58633158-58633177 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGTGATATTCA+AGG | + | chr8_3:58633451-58633470 | None:intergenic | 15.0% |
| !! | AAATTGTCATAAGATATTTA+CGG | + | chr8_3:58633749-58633768 | None:intergenic | 15.0% |
| !!! | ATTCTTTAATTTAAATGAGA+AGG | + | chr8_3:58633795-58633814 | None:intergenic | 15.0% |
| !!! | TTTCTATATTTTGTTTTCAA+AGG | - | chr8_3:58633989-58634008 | Msa1297970:intron | 15.0% |
| !!! | TTATTATGTTGAAATTTTCT+CGG | - | chr8_3:58635030-58635049 | Msa1297970:intron | 15.0% |
| !! | AGTTCAAGAAAAATAATTAA+AGG | + | chr8_3:58635689-58635708 | None:intergenic | 15.0% |
| !!! | TTTTTATCTGTTTAATCATA+GGG | - | chr8_3:58635730-58635749 | Msa1297970:five_prime_UTR | 15.0% |
| !!! | TTTTTGGTTCTAAATGAATT+TGG | + | chr8_3:58630794-58630813 | None:intergenic | 20.0% |
| !! | AGAATAAACAAAACATTGTT+GGG | + | chr8_3:58630909-58630928 | None:intergenic | 20.0% |
| !! | AAGAATAAACAAAACATTGT+TGG | + | chr8_3:58630910-58630929 | None:intergenic | 20.0% |
| !!! | AGGATAATTTGATTTTTGAA+AGG | + | chr8_3:58630969-58630988 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTTGTTCAGAAA+TGG | - | chr8_3:58631337-58631356 | Msa1297970:CDS | 20.0% |
| !!! | TTTTAGCTTAGAAACAATTT+TGG | - | chr8_3:58631835-58631854 | Msa1297970:intron | 20.0% |
| !! | AAAACAGAGTTATTTATGTT+TGG | + | chr8_3:58631951-58631970 | None:intergenic | 20.0% |
| !! | TAATCTAGTGTATATATTGT+TGG | - | chr8_3:58632072-58632091 | Msa1297970:intron | 20.0% |
| !!! | CTTTTTCTCATTCAAAAATT+TGG | + | chr8_3:58632175-58632194 | None:intergenic | 20.0% |
| !!! | ACTTCATGTTTTAAGTTTAT+TGG | - | chr8_3:58632270-58632289 | Msa1297970:intron | 20.0% |
| !! | ATATTTAGTAATTTAGGCAA+TGG | - | chr8_3:58632719-58632738 | Msa1297970:intron | 20.0% |
| !!! | AGTTAAAAATACCTGTATTT+TGG | - | chr8_3:58633205-58633224 | Msa1297970:intron | 20.0% |
| !!! | AAATGAAATACAAGCTATTT+TGG | - | chr8_3:58633259-58633278 | Msa1297970:intron | 20.0% |
| !! | TAAACAGATTAAATCTTCTT+TGG | + | chr8_3:58633298-58633317 | None:intergenic | 20.0% |
| !!! | ATTTAATCTGTTTACCATTT+TGG | - | chr8_3:58633304-58633323 | Msa1297970:CDS | 20.0% |
| !! | CAGTTAGTTAAGAAAATATA+TGG | - | chr8_3:58633594-58633613 | Msa1297970:intron | 20.0% |
| !! | TTGTATATGAATAAAAAGCA+AGG | + | chr8_3:58633881-58633900 | None:intergenic | 20.0% |
| !! | AGCTTAAATAAACTTGATAT+TGG | - | chr8_3:58633900-58633919 | Msa1297970:intron | 20.0% |
| !! | TATTTCATGTGGATAAAATT+TGG | - | chr8_3:58634265-58634284 | Msa1297970:intron | 20.0% |
| !!! | AAAATCAAGTTTTTTTTCCT+TGG | + | chr8_3:58634428-58634447 | None:intergenic | 20.0% |
| !!! | AAAAAAACTTGATTTTGACA+TGG | - | chr8_3:58634432-58634451 | Msa1297970:intron | 20.0% |
| !!! | AAAAAACTTGATTTTGACAT+GGG | - | chr8_3:58634433-58634452 | Msa1297970:intron | 20.0% |
| !! | ATGCTTTCTTTATAGAAAAA+TGG | + | chr8_3:58634531-58634550 | None:intergenic | 20.0% |
| !!! | TATAAAGAAAGCATCTAAAT+TGG | - | chr8_3:58634537-58634556 | Msa1297970:CDS | 20.0% |
| !! | AATGATTCATAAAGTAAGTT+AGG | + | chr8_3:58634625-58634644 | None:intergenic | 20.0% |
| !! | AATTGCTATCATTATTGTAA+AGG | - | chr8_3:58634730-58634749 | Msa1297970:intron | 20.0% |
| !! | TATCATTATTGTAAAGGTAA+GGG | - | chr8_3:58634736-58634755 | Msa1297970:intron | 20.0% |
| !!! | AAATTTGCTTTCTAACTTTT+TGG | - | chr8_3:58634759-58634778 | Msa1297970:intron | 20.0% |
| !! | ATACATACATAAACTAAAAG+CGG | + | chr8_3:58635008-58635027 | None:intergenic | 20.0% |
| !!! | AGAAAAATAATTAAAGGTAC+AGG | + | chr8_3:58635683-58635702 | None:intergenic | 20.0% |
| !!! | GTTTTTATCTGTTTAATCAT+AGG | - | chr8_3:58635729-58635748 | Msa1297970:five_prime_UTR | 20.0% |
| !!! | ATCAAGTATTTTTGTAAGAA+CGG | + | chr8_3:58635842-58635861 | None:intergenic | 20.0% |
| ! | AAAAATCACATTGATCTTTC+AGG | + | chr8_3:58631600-58631619 | None:intergenic | 25.0% |
| ! | TATGTTTGTGTTTGATTATG+TGG | - | chr8_3:58631619-58631638 | Msa1297970:intron | 25.0% |
| ! | AGGTAAAAGTGATATATGTT+CGG | - | chr8_3:58631709-58631728 | Msa1297970:intron | 25.0% |
| ! | GGATGCATTTATATAAAAGT+GGG | - | chr8_3:58631730-58631749 | Msa1297970:intron | 25.0% |
| ! | AAGTTAAAAGTCAATTGTAG+AGG | - | chr8_3:58631799-58631818 | Msa1297970:intron | 25.0% |
| !!! | TACTCCTTTAGAATCAATTT+AGG | - | chr8_3:58631908-58631927 | Msa1297970:intron | 25.0% |
| !! | TTGATTGTTTGATTCCATTT+TGG | - | chr8_3:58631987-58632006 | Msa1297970:CDS | 25.0% |
| ! | ACATGAAGTAGCAAAATTAA+GGG | + | chr8_3:58632259-58632278 | None:intergenic | 25.0% |
| ! | AACATGAAGTAGCAAAATTA+AGG | + | chr8_3:58632260-58632279 | None:intergenic | 25.0% |
| ! | CTAGTGAAATAAAATGATCA+TGG | + | chr8_3:58632671-58632690 | None:intergenic | 25.0% |
| !!! | CATGATCATTTTATTTCACT+AGG | - | chr8_3:58632669-58632688 | Msa1297970:intron | 25.0% |
| ! | ATAAATCAAGCATAACAAGA+AGG | + | chr8_3:58632791-58632810 | None:intergenic | 25.0% |
| ! | ACTTCTGCATTATTTCATAT+TGG | - | chr8_3:58632916-58632935 | Msa1297970:intron | 25.0% |
| ! | CTTCTGCATTATTTCATATT+GGG | - | chr8_3:58632917-58632936 | Msa1297970:intron | 25.0% |
| !! | AAATTACTTCCGACTTTTAA+AGG | + | chr8_3:58633238-58633257 | None:intergenic | 25.0% |
| !!! | GTTTACCATTTTGGTTAATT+TGG | - | chr8_3:58633313-58633332 | Msa1297970:CDS | 25.0% |
| !!! | TAGTATTTTATTTGTCCTAG+AGG | - | chr8_3:58633515-58633534 | Msa1297970:intron | 25.0% |
| ! | TTTGACCTTCAAGTAATATA+TGG | - | chr8_3:58633650-58633669 | Msa1297970:intron | 25.0% |
| ! | AAAGACCATATATTACTTGA+AGG | + | chr8_3:58633658-58633677 | None:intergenic | 25.0% |
| ! | TATGAATAAAAAGCAAGGTT+GGG | + | chr8_3:58633876-58633895 | None:intergenic | 25.0% |
| ! | ATATGAATAAAAAGCAAGGT+TGG | + | chr8_3:58633877-58633896 | None:intergenic | 25.0% |
| ! | ATTGGATTATTGCTAAATCA+TGG | - | chr8_3:58633918-58633937 | Msa1297970:intron | 25.0% |
| !! | TGCAATTGTGGTTTAATTTA+AGG | + | chr8_3:58634128-58634147 | None:intergenic | 25.0% |
| ! | GAGAACTGAAAAATACTAAA+TGG | - | chr8_3:58634202-58634221 | Msa1297970:intron | 25.0% |
| ! | CTATCATTATTGTAAAGGTA+AGG | - | chr8_3:58634735-58634754 | Msa1297970:intron | 25.0% |
| !!! | TTCTTGAATCTAGTTTTACA+AGG | + | chr8_3:58635226-58635245 | None:intergenic | 25.0% |
| ! | AATCAGTAAAATAAGCAGTT+TGG | + | chr8_3:58635261-58635280 | None:intergenic | 25.0% |
| ! | ATTGTGATGAACTTAAATGA+GGG | - | chr8_3:58635458-58635477 | Msa1297970:intron | 25.0% |
| !! | ATTGTGTTGTTACATAATAG+TGG | - | chr8_3:58635612-58635631 | Msa1297970:five_prime_UTR | 25.0% |
| TAAACAAAACATTGTTGGGT+CGG | + | chr8_3:58630905-58630924 | None:intergenic | 30.0% | |
| !!! | GAGTGCTGCATTTATTTTAA+GGG | + | chr8_3:58631007-58631026 | None:intergenic | 30.0% |
| !!! | AGAGTGCTGCATTTATTTTA+AGG | + | chr8_3:58631008-58631027 | None:intergenic | 30.0% |
| GATTATTGGATTCTGTAATG+TGG | + | chr8_3:58631056-58631075 | None:intergenic | 30.0% | |
| TGATTGATTACCGTTGAAAA+TGG | - | chr8_3:58631159-58631178 | Msa1297970:three_prime_UTR | 30.0% | |
| ! | CTTGATGTTGTTCGTTTTAT+TGG | - | chr8_3:58631514-58631533 | Msa1297970:intron | 30.0% |
| !! | CATTGATCTTTCAGGTTAAT+AGG | + | chr8_3:58631592-58631611 | None:intergenic | 30.0% |
| !!! | GCTGAAAATGAGTTGATTTT+AGG | - | chr8_3:58631689-58631708 | Msa1297970:intron | 30.0% |
| CGGATGCATTTATATAAAAG+TGG | - | chr8_3:58631729-58631748 | Msa1297970:intron | 30.0% | |
| ! | TGAGCCTAAATTGATTCTAA+AGG | + | chr8_3:58631915-58631934 | None:intergenic | 30.0% |
| AATTTAGGCTCATCTAAAAG+TGG | - | chr8_3:58631923-58631942 | Msa1297970:intron | 30.0% | |
| !!! | TTGTTGGATCTGTTTTTTTC+AGG | - | chr8_3:58632088-58632107 | Msa1297970:intron | 30.0% |
| ! | TAAAGAAGTCAAAGCTTTAG+AGG | - | chr8_3:58632128-58632147 | Msa1297970:intron | 30.0% |
| CATGAAGTAGCAAAATTAAG+GGG | + | chr8_3:58632258-58632277 | None:intergenic | 30.0% | |
| GAACAAAATGAGAGATTCTA+AGG | + | chr8_3:58632419-58632438 | None:intergenic | 30.0% | |
| !! | AGTTACTCAGTTTTTAGACA+AGG | - | chr8_3:58632753-58632772 | Msa1297970:intron | 30.0% |
| CATTATTTCATATTGGGAGA+TGG | - | chr8_3:58632923-58632942 | Msa1297970:intron | 30.0% | |
| TGTTTCAGCTATTGTTTGAA+GGG | - | chr8_3:58633126-58633145 | Msa1297970:intron | 30.0% | |
| ATTAAATCTTCTTTGGTCAG+TGG | + | chr8_3:58633291-58633310 | None:intergenic | 30.0% | |
| ATGCTCCAAATTAACCAAAA+TGG | + | chr8_3:58633321-58633340 | None:intergenic | 30.0% | |
| AATGTCAAATGAACAGCTAA+TGG | - | chr8_3:58633358-58633377 | Msa1297970:intron | 30.0% | |
| TTTCCAAATACATAGACTAC+TGG | - | chr8_3:58633474-58633493 | Msa1297970:intron | 30.0% | |
| AAGTAAGCAAGCATAATATG+TGG | + | chr8_3:58633555-58633574 | None:intergenic | 30.0% | |
| TTAGAGCACAATTTAATTGC+TGG | - | chr8_3:58633620-58633639 | Msa1297970:intron | 30.0% | |
| ! | TTTTTGTCAAACTGTTGTCT+TGG | - | chr8_3:58633680-58633699 | Msa1297970:intron | 30.0% |
| GACGGTACTAAATAAACAAT+AGG | + | chr8_3:58633712-58633731 | None:intergenic | 30.0% | |
| ATCATGGAATCAGTGAAATA+AGG | - | chr8_3:58633934-58633953 | Msa1297970:intron | 30.0% | |
| ! | AATAAGGATGAAAAAGTGTG+AGG | - | chr8_3:58633950-58633969 | Msa1297970:intron | 30.0% |
| ! | CTACTCAATTTAAGACTACA+AGG | + | chr8_3:58634040-58634059 | None:intergenic | 30.0% |
| !! | GGTGTTTGATTTGAATATTC+TGG | - | chr8_3:58634223-58634242 | Msa1297970:intron | 30.0% |
| ATTCTGTTGTCTATTTCATG+TGG | - | chr8_3:58634254-58634273 | Msa1297970:intron | 30.0% | |
| TTGAACAATCTATTGCAGAA+GGG | + | chr8_3:58634319-58634338 | None:intergenic | 30.0% | |
| TCTAAATTGGTCAAGGAAAT+CGG | - | chr8_3:58634550-58634569 | Msa1297970:CDS | 30.0% | |
| CTATACTGAACAAAATGATG+TGG | + | chr8_3:58634600-58634619 | None:intergenic | 30.0% | |
| GTACTTCATGGTGAATTTAT+TGG | - | chr8_3:58634812-58634831 | Msa1297970:intron | 30.0% | |
| ATTTCTACCATAGGTAAACA+TGG | + | chr8_3:58634850-58634869 | None:intergenic | 30.0% | |
| ! | AAACTCTATTCAGTGCTTTT+TGG | - | chr8_3:58635093-58635112 | Msa1297970:intron | 30.0% |
| !! | AACTCTATTCAGTGCTTTTT+GGG | - | chr8_3:58635094-58635113 | Msa1297970:intron | 30.0% |
| GGCGTTTACAAAAAGAAAAT+TGG | + | chr8_3:58635186-58635205 | None:intergenic | 30.0% | |
| GATTGTGATGAACTTAAATG+AGG | - | chr8_3:58635457-58635476 | Msa1297970:intron | 30.0% | |
| ! | TAAATGAGGGACAATTGTTT+TGG | - | chr8_3:58635471-58635490 | Msa1297970:CDS | 30.0% |
| ! | AAATGAGGGACAATTGTTTT+GGG | - | chr8_3:58635472-58635491 | Msa1297970:CDS | 30.0% |
| !!! | CATATTGATTTTGTGCTCTT+TGG | - | chr8_3:58635536-58635555 | Msa1297970:exon | 30.0% |
| !! | GTTGTTACATAATAGTGGAT+TGG | - | chr8_3:58635617-58635636 | Msa1297970:five_prime_UTR | 30.0% |
| GTCAATCTTGTAATATACAG+CGG | - | chr8_3:58635801-58635820 | Msa1297970:five_prime_UTR | 30.0% | |
| ACTAATAATCACGATTCACG+AGG | - | chr8_3:58630857-58630876 | Msa1297970:three_prime_UTR | 35.0% | |
| CTAATAATCACGATTCACGA+GGG | - | chr8_3:58630858-58630877 | Msa1297970:three_prime_UTR | 35.0% | |
| AATAAATGCAGCACTCTGTT+TGG | - | chr8_3:58631011-58631030 | Msa1297970:three_prime_UTR | 35.0% | |
| ! | GACAACTGATCCATTTTCAA+CGG | + | chr8_3:58631172-58631191 | None:intergenic | 35.0% |
| GTTGAAAATGGATCAGTTGT+CGG | - | chr8_3:58631171-58631190 | Msa1297970:three_prime_UTR | 35.0% | |
| TGAAGGGGAAATCAAAACAA+TGG | + | chr8_3:58631279-58631298 | None:intergenic | 35.0% | |
| CATGAGACAGAAATTTGAAG+GGG | + | chr8_3:58631294-58631313 | None:intergenic | 35.0% | |
| GCATGAGACAGAAATTTGAA+GGG | + | chr8_3:58631295-58631314 | None:intergenic | 35.0% | |
| TGCATGAGACAGAAATTTGA+AGG | + | chr8_3:58631296-58631315 | None:intergenic | 35.0% | |
| TCAGAAGCTGGAGAAAATTA+AGG | - | chr8_3:58631363-58631382 | Msa1297970:intron | 35.0% | |
| ! | TTTACACTCTCGCATTTTCT+CGG | + | chr8_3:58631425-58631444 | None:intergenic | 35.0% |
| ! | AGAAAATGCGAGAGTGTAAA+GGG | - | chr8_3:58631425-58631444 | Msa1297970:intron | 35.0% |
| !! | GTTTGATTCCATTTTGGCAT+TGG | - | chr8_3:58631993-58632012 | Msa1297970:CDS | 35.0% |
| GTAATTCAAGGATCAAAGCT+TGG | + | chr8_3:58632026-58632045 | None:intergenic | 35.0% | |
| CCACTAATCATGGTAATTCA+AGG | + | chr8_3:58632038-58632057 | None:intergenic | 35.0% | |
| CCTTGAATTACCATGATTAG+TGG | - | chr8_3:58632035-58632054 | Msa1297970:intron | 35.0% | |
| AATTACCATGATTAGTGGTC+TGG | - | chr8_3:58632040-58632059 | Msa1297970:intron | 35.0% | |
| GAATGAGAAAAAGCAGTCAA+TGG | - | chr8_3:58632182-58632201 | Msa1297970:CDS | 35.0% | |
| ! | AATGGTAAGATGTTTAGCTC+TGG | - | chr8_3:58632200-58632219 | Msa1297970:CDS | 35.0% |
| ! | GAGATTCTAAGGAAGCAAAA+TGG | + | chr8_3:58632408-58632427 | None:intergenic | 35.0% |
| ! | TCATTTTGTTCTTGCTTGAG+TGG | - | chr8_3:58632428-58632447 | Msa1297970:intron | 35.0% |
| ! | CTTACTTGTTGATGCTATCA+AGG | + | chr8_3:58632462-58632481 | None:intergenic | 35.0% |
| TAAGCGAATTGAACTCTTTG+AGG | - | chr8_3:58632527-58632546 | Msa1297970:intron | 35.0% | |
| AAGCGAATTGAACTCTTTGA+GGG | - | chr8_3:58632528-58632547 | Msa1297970:intron | 35.0% | |
| ATAACAAGAAGGTAGAAGCA+CGG | + | chr8_3:58632780-58632799 | None:intergenic | 35.0% | |
| ATTGTGACTGTATGTATGAG+CGG | - | chr8_3:58632843-58632862 | Msa1297970:intron | 35.0% | |
| ! | AGATCATAGAAGTGTGAGAA+AGG | + | chr8_3:58633022-58633041 | None:intergenic | 35.0% |
| CTGTTTCAGCTATTGTTTGA+AGG | - | chr8_3:58633125-58633144 | Msa1297970:intron | 35.0% | |
| GTTTCAGCTATTGTTTGAAG+GGG | - | chr8_3:58633127-58633146 | Msa1297970:intron | 35.0% | |
| TTTCAGCTATTGTTTGAAGG+GGG | - | chr8_3:58633128-58633147 | Msa1297970:intron | 35.0% | |
| ! | AATGAACAGCTAATGGATCA+TGG | - | chr8_3:58633365-58633384 | Msa1297970:intron | 35.0% |
| ! | ATGAACAGCTAATGGATCAT+GGG | - | chr8_3:58633366-58633385 | Msa1297970:intron | 35.0% |
| TCACCAGTAGTCTATGTATT+TGG | + | chr8_3:58633480-58633499 | None:intergenic | 35.0% | |
| AATAAAAAGCAAGGTTGGGA+AGG | + | chr8_3:58633872-58633891 | None:intergenic | 35.0% | |
| TTGTTATACATACACCTCCT+TGG | - | chr8_3:58634065-58634084 | Msa1297970:intron | 35.0% | |
| TGTTATACATACACCTCCTT+GGG | - | chr8_3:58634066-58634085 | Msa1297970:intron | 35.0% | |
| ! | ATATTTTCCACATGTACCCA+AGG | + | chr8_3:58634085-58634104 | None:intergenic | 35.0% |
| ACTGTACATCAAACTTCTAG+AGG | + | chr8_3:58634169-58634188 | None:intergenic | 35.0% | |
| TCTAGAAGTTTGATGTACAG+TGG | - | chr8_3:58634168-58634187 | Msa1297970:CDS | 35.0% | |
| CTTGAACAATCTATTGCAGA+AGG | + | chr8_3:58634320-58634339 | None:intergenic | 35.0% | |
| GCAATAGATTGTTCAAGACA+CGG | - | chr8_3:58634323-58634342 | Msa1297970:intron | 35.0% | |
| GTTCAAGACACGGTAAATAT+TGG | - | chr8_3:58634333-58634352 | Msa1297970:CDS | 35.0% | |
| ! | TTTTTCCTTGGACTACTTCT+GGG | + | chr8_3:58634416-58634435 | None:intergenic | 35.0% |
| !!! | TTTTTTCCTTGGACTACTTC+TGG | + | chr8_3:58634417-58634436 | None:intergenic | 35.0% |
| !! | TGATTTTGACATGGGTACTA+AGG | - | chr8_3:58634441-58634460 | Msa1297970:intron | 35.0% |
| !! | GATTTTGACATGGGTACTAA+GGG | - | chr8_3:58634442-58634461 | Msa1297970:intron | 35.0% |
| ! | TAACCTCTTCCTTTTGTAGA+CGG | - | chr8_3:58634468-58634487 | Msa1297970:intron | 35.0% |
| TCATTTGTTCCGTCTACAAA+AGG | + | chr8_3:58634480-58634499 | None:intergenic | 35.0% | |
| !! | GAAAGCATCTAAATTGGTCA+AGG | - | chr8_3:58634543-58634562 | Msa1297970:CDS | 35.0% |
| ! | CTTGCTCGCATTTTTGTAAT+AGG | - | chr8_3:58634655-58634674 | Msa1297970:intron | 35.0% |
| TGCTACTGACAAGTGTATTA+TGG | - | chr8_3:58634679-58634698 | Msa1297970:intron | 35.0% | |
| !! | TTACTTTTCCTCATCGTCAT+TGG | - | chr8_3:58634704-58634723 | Msa1297970:intron | 35.0% |
| TGAAGTACAGCAACAATAGA+GGG | + | chr8_3:58634800-58634819 | None:intergenic | 35.0% | |
| ATGAAGTACAGCAACAATAG+AGG | + | chr8_3:58634801-58634820 | None:intergenic | 35.0% | |
| TCTATTGTTGCTGTACTTCA+TGG | - | chr8_3:58634800-58634819 | Msa1297970:intron | 35.0% | |
| GTCAAAGCAATTTCTACCAT+AGG | + | chr8_3:58634859-58634878 | None:intergenic | 35.0% | |
| AAAAGCGGTAAATCTGTGAA+AGG | + | chr8_3:58634993-58635012 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGGTTGTTAACAGA+CGG | - | chr8_3:58635108-58635127 | Msa1297970:intron | 35.0% |
| TACAAGGTAAACTGAAACCA+AGG | + | chr8_3:58635210-58635229 | None:intergenic | 35.0% | |
| !!! | TTTTGTGCTCTTTGGTTTGA+CGG | - | chr8_3:58635544-58635563 | Msa1297970:five_prime_UTR | 35.0% |
| ATAATGCTCTCTCATGTTTC+AGG | + | chr8_3:58635651-58635670 | None:intergenic | 35.0% | |
| ! | CTGAACAATTTTTACTCGAC+AGG | - | chr8_3:58635707-58635726 | Msa1297970:five_prime_UTR | 35.0% |
| AGATCTGAATGAGGAAGGTT+TGG | + | chr8_3:58631108-58631127 | None:intergenic | 40.0% | |
| ! | ACCGTCAGATTTTGCACTAA+CGG | + | chr8_3:58631133-58631152 | None:intergenic | 40.0% |
| TAGATTCTTACGATAGAGCG+CGG | + | chr8_3:58631246-58631265 | None:intergenic | 40.0% | |
| AGGGGAAATCAAAACAATGG+AGG | + | chr8_3:58631276-58631295 | None:intergenic | 40.0% | |
| ! | CAGAAATGGATTTCAGAAGC+TGG | - | chr8_3:58631351-58631370 | Msa1297970:intron | 40.0% |
| ! | GAGAAAATGCGAGAGTGTAA+AGG | - | chr8_3:58631424-58631443 | Msa1297970:intron | 40.0% |
| ! | GCACATTTTCAACACAGATC+TGG | + | chr8_3:58631564-58631583 | None:intergenic | 40.0% |
| ! | GAAAATGTCTTGCTAGCTTC+CGG | - | chr8_3:58632573-58632592 | Msa1297970:intron | 40.0% |
| ! | TAACAAGAAGGTAGAAGCAC+GGG | + | chr8_3:58632779-58632798 | None:intergenic | 40.0% |
| TGCTTGATTTATACGACTCG+TGG | - | chr8_3:58632799-58632818 | Msa1297970:intron | 40.0% | |
| CACTTTCACTGAAACGATTG+AGG | + | chr8_3:58632875-58632894 | None:intergenic | 40.0% | |
| AAGGTTGACAGCCAAAATAC+AGG | + | chr8_3:58633219-58633238 | None:intergenic | 40.0% | |
| ! | GGCTGTCAACCTTTAAAAGT+CGG | - | chr8_3:58633226-58633245 | Msa1297970:intron | 40.0% |
| ! | AGCTAATGGATCATGGGAAT+CGG | - | chr8_3:58633372-58633391 | Msa1297970:intron | 40.0% |
| ! | GATGAAAAAGTGTGAGGAAG+TGG | - | chr8_3:58633956-58633975 | Msa1297970:intron | 40.0% |
| ! | TTTTCCTTGGACTACTTCTG+GGG | + | chr8_3:58634415-58634434 | None:intergenic | 40.0% |
| AATTGGTCAAGGAAATCGGT+AGG | - | chr8_3:58634554-58634573 | Msa1297970:CDS | 40.0% | |
| CAATTACTCCAATGACGATG+AGG | + | chr8_3:58634715-58634734 | None:intergenic | 40.0% | |
| TAGGTAAACATGGCACATCT+AGG | + | chr8_3:58634840-58634859 | None:intergenic | 40.0% | |
| AGATGTGCCATGTTTACCTA+TGG | - | chr8_3:58634840-58634859 | Msa1297970:intron | 40.0% | |
| GAAATTGCTTTGACAACACG+TGG | - | chr8_3:58634865-58634884 | Msa1297970:intron | 40.0% | |
| !! | AGTGGAGGAGTTCTTTTTCA+TGG | + | chr8_3:58634942-58634961 | None:intergenic | 40.0% |
| ! | TCACTAGGCATAGCTTTTGA+TGG | - | chr8_3:58634967-58634986 | Msa1297970:intron | 40.0% |
| ! | TCTTTTTGTAAACGCCACCT+TGG | - | chr8_3:58635190-58635209 | Msa1297970:intron | 40.0% |
| AAGGTAAACTGAAACCAAGG+TGG | + | chr8_3:58635207-58635226 | None:intergenic | 40.0% | |
| !!! | TTGTTTTGGGAACACACACA+AGG | - | chr8_3:58635485-58635504 | Msa1297970:CDS | 40.0% |
| GCTAAACAAACGAATCCTCT+CGG | - | chr8_3:58635756-58635775 | Msa1297970:five_prime_UTR | 40.0% | |
| CAAACAACAAACAATCCGAG+AGG | + | chr8_3:58635774-58635793 | None:intergenic | 40.0% | |
| ! | AAGGGATCAAAAGCGCGTTT+AGG | + | chr8_3:58630989-58631008 | None:intergenic | 45.0% |
| GCCGTTAGTGCAAAATCTGA+CGG | - | chr8_3:58631129-58631148 | Msa1297970:three_prime_UTR | 45.0% | |
| AGTGCAAAATCTGACGGTTG+AGG | - | chr8_3:58631135-58631154 | Msa1297970:three_prime_UTR | 45.0% | |
| GAGTAGAAAGAGCAGGCAAT+TGG | - | chr8_3:58631390-58631409 | Msa1297970:intron | 45.0% | |
| GTGTGCTTCCAATGCCAAAA+TGG | + | chr8_3:58632004-58632023 | None:intergenic | 45.0% | |
| AAGAGCCAGACCACTAATCA+TGG | + | chr8_3:58632048-58632067 | None:intergenic | 45.0% | |
| TCTTCTGTGTCGCCTTCATT+GGG | + | chr8_3:58632555-58632574 | None:intergenic | 45.0% | |
| TTCTTCTGTGTCGCCTTCAT+TGG | + | chr8_3:58632556-58632575 | None:intergenic | 45.0% | |
| GAAGAAGCCAGCATACTTAC+CGG | + | chr8_3:58632595-58632614 | None:intergenic | 45.0% | |
| ACACAGATCAAGCCATTGAG+AGG | - | chr8_3:58633405-58633424 | Msa1297970:intron | 45.0% | |
| CACAGATCAAGCCATTGAGA+GGG | - | chr8_3:58633406-58633425 | Msa1297970:intron | 45.0% | |
| ACAGATCAAGCCATTGAGAG+GGG | - | chr8_3:58633407-58633426 | Msa1297970:intron | 45.0% | |
| AAGCCATTGAGAGGGGAAAA+AGG | - | chr8_3:58633414-58633433 | Msa1297970:intron | 45.0% | |
| AGCCATTGAGAGGGGAAAAA+GGG | - | chr8_3:58633415-58633434 | Msa1297970:intron | 45.0% | |
| ! | AACCCTTTTTCCCCTCTCAA+TGG | + | chr8_3:58633420-58633439 | None:intergenic | 45.0% |
| ATTGAGAGGGGAAAAAGGGT+TGG | - | chr8_3:58633419-58633438 | Msa1297970:intron | 45.0% | |
| GAGCTACAACATTTGCCTCT+AGG | + | chr8_3:58633533-58633552 | None:intergenic | 45.0% | |
| ACGGAAGTAAACTGACGAGA+CGG | + | chr8_3:58633730-58633749 | None:intergenic | 45.0% | |
| GGTTGGGAAGGTAATGTTTC+AGG | + | chr8_3:58633860-58633879 | None:intergenic | 45.0% | |
| ! | TTTTCCACATGTACCCAAGG+AGG | + | chr8_3:58634082-58634101 | None:intergenic | 45.0% |
| ! | AAACTTCTAGAGGAGCAGAG+GGG | + | chr8_3:58634159-58634178 | None:intergenic | 45.0% |
| ! | CAAACTTCTAGAGGAGCAGA+GGG | + | chr8_3:58634160-58634179 | None:intergenic | 45.0% |
| ! | TCAAACTTCTAGAGGAGCAG+AGG | + | chr8_3:58634161-58634180 | None:intergenic | 45.0% |
| GTTCCGTCTACAAAAGGAAG+AGG | + | chr8_3:58634474-58634493 | None:intergenic | 45.0% | |
| CTATGCCTAGTGAAGACTAG+TGG | + | chr8_3:58634960-58634979 | None:intergenic | 45.0% | |
| GTTAACAGACGGTCAAGATC+AGG | - | chr8_3:58635119-58635138 | Msa1297970:intron | 45.0% | |
| GCTTGTACATCCAGAGAACA+AGG | - | chr8_3:58635346-58635365 | Msa1297970:intron | 45.0% | |
| CTTCTGTTGTTCGTGACAAC+AGG | + | chr8_3:58635401-58635420 | None:intergenic | 45.0% | |
| CGAACAACAGAAGACTGCTT+TGG | - | chr8_3:58635408-58635427 | Msa1297970:intron | 45.0% | |
| CTAACGGCGAGATCTGAATG+AGG | + | chr8_3:58631117-58631136 | None:intergenic | 50.0% | |
| CGATAGAGCGCGGAAATTGT+CGG | + | chr8_3:58631236-58631255 | None:intergenic | 50.0% | |
| AGGATGCGAGTAGAAAGAGC+AGG | - | chr8_3:58631383-58631402 | Msa1297970:intron | 50.0% | |
| ! | CTCTTTGAGGGACCCAATGA+AGG | - | chr8_3:58632540-58632559 | Msa1297970:intron | 50.0% |
| CTAGCTTCCGGTAAGTATGC+TGG | - | chr8_3:58632585-58632604 | Msa1297970:intron | 50.0% | |
| GTGACTGTATGTATGAGCGG+AGG | - | chr8_3:58632846-58632865 | Msa1297970:intron | 50.0% | |
| AGCTATTGTTTGAAGGGGGC+TGG | - | chr8_3:58633132-58633151 | Msa1297970:intron | 50.0% | |
| GGATCATGGGAATCGGATGA+TGG | - | chr8_3:58633379-58633398 | Msa1297970:intron | 50.0% | |
| TACACCTCCTTGGGTACATG+TGG | - | chr8_3:58634075-58634094 | Msa1297970:intron | 50.0% | |
| TGAGACTGCTGCAGCTCTTA+AGG | - | chr8_3:58634359-58634378 | Msa1297970:intron | 50.0% | |
| !! | TTGGACTACTTCTGGGGTGA+AGG | + | chr8_3:58634409-58634428 | None:intergenic | 50.0% |
| TTCACCCCAGAAGTAGTCCA+AGG | - | chr8_3:58634408-58634427 | Msa1297970:intron | 50.0% | |
| GAGCAGAGTTGTCAATGAGC+TGG | - | chr8_3:58634498-58634517 | Msa1297970:intron | 50.0% | |
| !! | CTCCTCCACTAGTCTTCACT+AGG | - | chr8_3:58634952-58634971 | Msa1297970:intron | 50.0% |
| TGCCTAGTGAAGACTAGTGG+AGG | + | chr8_3:58634957-58634976 | None:intergenic | 50.0% | |
| TCGCGAATGTCCTTGTTCTC+TGG | + | chr8_3:58635359-58635378 | None:intergenic | 50.0% | |
| AAGGACATTCGCGACATTCC+AGG | - | chr8_3:58635365-58635384 | Msa1297970:intron | 50.0% | |
| ACAACAGGAGGAGCTAATCC+TGG | + | chr8_3:58635386-58635405 | None:intergenic | 50.0% | |
| CTGTTGTTCGTGACAACAGG+AGG | + | chr8_3:58635398-58635417 | None:intergenic | 50.0% | |
| TGGTTTGACGGCGATGACAA+TGG | - | chr8_3:58635556-58635575 | Msa1297970:five_prime_UTR | 50.0% | |
| CGGCGAGATCTGAATGAGGA+AGG | + | chr8_3:58631113-58631132 | None:intergenic | 55.0% | |
| GGGGACATGGAGTGCAATTG+TGG | + | chr8_3:58634140-58634159 | None:intergenic | 55.0% | |
| TGCTGCAGCTCTTAAGGCAC+AGG | - | chr8_3:58634365-58634384 | Msa1297970:intron | 55.0% | |
| GGTCAAGGAAATCGGTAGGC+AGG | - | chr8_3:58634558-58634577 | Msa1297970:CDS | 55.0% | |
| TCAGTTGTCGGCGATCAGCG+AGG | - | chr8_3:58631183-58631202 | Msa1297970:three_prime_UTR | 60.0% | |
| GAGGATCTGGCGGAGATCGA+CGG | - | chr8_3:58631202-58631221 | Msa1297970:three_prime_UTR | 60.0% | |
| CTAGAGGAGCAGAGGGGACA+TGG | + | chr8_3:58634153-58634172 | None:intergenic | 60.0% | |
| GTCGGCGATCAGCGAGGATC+TGG | - | chr8_3:58631189-58631208 | Msa1297970:three_prime_UTR | 65.0% | |
| GGCGATCAGCGAGGATCTGG+CGG | - | chr8_3:58631192-58631211 | Msa1297970:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 58630778 | 58635938 | 58630778 | ID=Msa1297970;Name=Msa1297970 |
| chr8_3 | mRNA | 58630778 | 58635938 | 58630778 | ID=Msa1297970-mRNA-1;Parent=Msa1297970;Name=Msa1297970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=400|1|1|1|1|1|10|487|266 |
| chr8_3 | exon | 58630778 | 58631369 | 58630778 | ID=Msa1297970-mRNA-1:exon:16850;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58631965 | 58632039 | 58631965 | ID=Msa1297970-mRNA-1:exon:16849;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58632137 | 58632229 | 58632137 | ID=Msa1297970-mRNA-1:exon:16848;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58632330 | 58632386 | 58632330 | ID=Msa1297970-mRNA-1:exon:16847;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58633280 | 58633359 | 58633280 | ID=Msa1297970-mRNA-1:exon:16846;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58634122 | 58634210 | 58634122 | ID=Msa1297970-mRNA-1:exon:16845;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58634325 | 58634362 | 58634325 | ID=Msa1297970-mRNA-1:exon:16844;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58634513 | 58634606 | 58634513 | ID=Msa1297970-mRNA-1:exon:16843;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58635270 | 58635362 | 58635270 | ID=Msa1297970-mRNA-1:exon:16842;Parent=Msa1297970-mRNA-1 |
| chr8_3 | exon | 58635462 | 58635938 | 58635462 | ID=Msa1297970-mRNA-1:exon:16841;Parent=Msa1297970-mRNA-1 |
| chr8_3 | five_prime_UTR | 58635539 | 58635938 | 58635539 | ID=Msa1297970-mRNA-1:five_prime_utr;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58635462 | 58635538 | 58635462 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58635270 | 58635362 | 58635270 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58634513 | 58634606 | 58634513 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58634325 | 58634362 | 58634325 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58634122 | 58634210 | 58634122 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58633280 | 58633359 | 58633280 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58632330 | 58632386 | 58632330 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58632137 | 58632229 | 58632137 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58631965 | 58632039 | 58631965 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | CDS | 58631265 | 58631369 | 58631265 | ID=Msa1297970-mRNA-1:cds;Parent=Msa1297970-mRNA-1 |
| chr8_3 | three_prime_UTR | 58630778 | 58631264 | 58630778 | ID=Msa1297970-mRNA-1:three_prime_utr;Parent=Msa1297970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
