Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206230 | sp|Q944A9|NPS11_ARATH | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 3.12e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206230 | A0A072UPG8 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001680 | Msa1206230 | 0.815653 | 8.279089e-52 | -8.615850e-47 |
| Msa0012940 | Msa1206230 | 0.818461 | 1.936881e-52 | -8.615850e-47 |
| Msa0035120 | Msa1206230 | 0.801307 | 9.579124e-49 | -8.615850e-47 |
| Msa0052870 | Msa1206230 | 0.818223 | 2.192568e-52 | -8.615850e-47 |
| Msa0075300 | Msa1206230 | 0.800341 | 1.508500e-48 | -8.615850e-47 |
| Msa0077340 | Msa1206230 | 0.819783 | 9.689594e-53 | -8.615850e-47 |
| Msa0081520 | Msa1206230 | 0.809874 | 1.525108e-50 | -8.615850e-47 |
| Msa0093850 | Msa1206230 | 0.832508 | 9.084806e-56 | -8.615850e-47 |
| Msa0098470 | Msa1206230 | 0.845113 | 4.972330e-59 | -8.615850e-47 |
| Msa0099230 | Msa1206230 | 0.851056 | 1.137563e-60 | -8.615850e-47 |
| Msa0106320 | Msa1206230 | 0.847438 | 1.156526e-59 | -8.615850e-47 |
| Msa0610320 | Msa1206230 | 0.801343 | 9.416485e-49 | -8.615850e-47 |
| Msa0623900 | Msa1206230 | 0.807330 | 5.328837e-50 | -8.615850e-47 |
| Msa0623910 | Msa1206230 | 0.809920 | 1.490706e-50 | -8.615850e-47 |
| Msa0624900 | Msa1206230 | 0.805854 | 1.091787e-49 | -8.615850e-47 |
| Msa0626450 | Msa1206230 | 0.813441 | 2.555291e-51 | -8.615850e-47 |
| Msa0626490 | Msa1206230 | 0.818912 | 1.529784e-52 | -8.615850e-47 |
| Msa0638480 | Msa1206230 | 0.802776 | 4.779081e-49 | -8.615850e-47 |
| Msa0651550 | Msa1206230 | 0.807268 | 5.493237e-50 | -8.615850e-47 |
| Msa0652000 | Msa1206230 | 0.819397 | 1.186631e-52 | -8.615850e-47 |
| Msa0652770 | Msa1206230 | 0.803597 | 3.230563e-49 | -8.615850e-47 |
| Msa0660370 | Msa1206230 | 0.847188 | 1.354488e-59 | -8.615850e-47 |
| Msa0664600 | Msa1206230 | 0.818032 | 2.421959e-52 | -8.615850e-47 |
| Msa0681260 | Msa1206230 | 0.813220 | 2.857553e-51 | -8.615850e-47 |
| Msa0681280 | Msa1206230 | 0.818035 | 2.417994e-52 | -8.615850e-47 |
| Msa0693330 | Msa1206230 | 0.802343 | 5.869323e-49 | -8.615850e-47 |
| Msa0702720 | Msa1206230 | 0.802183 | 6.330983e-49 | -8.615850e-47 |
| Msa0706760 | Msa1206230 | 0.808653 | 2.786568e-50 | -8.615850e-47 |
| Msa0711400 | Msa1206230 | 0.855855 | 4.766804e-62 | -8.615850e-47 |
| Msa0810930 | Msa1206230 | 0.826457 | 2.685317e-54 | -8.615850e-47 |
| Msa0833530 | Msa1206230 | 0.826248 | 3.010488e-54 | -8.615850e-47 |
| Msa0130110 | Msa1206230 | 0.824534 | 7.662476e-54 | -8.615850e-47 |
| Msa0136650 | Msa1206230 | 0.815854 | 7.466556e-52 | -8.615850e-47 |
| Msa0138360 | Msa1206230 | 0.812507 | 4.095273e-51 | -8.615850e-47 |
| Msa0148010 | Msa1206230 | 0.811520 | 6.718690e-51 | -8.615850e-47 |
| Msa0152520 | Msa1206230 | 0.802357 | 5.828543e-49 | -8.615850e-47 |
| Msa0152870 | Msa1206230 | 0.838205 | 3.301412e-57 | -8.615850e-47 |
| Msa0173890 | Msa1206230 | 0.815783 | 7.744012e-52 | -8.615850e-47 |
| Msa0174450 | Msa1206230 | 0.817066 | 3.998301e-52 | -8.615850e-47 |
| Msa0192480 | Msa1206230 | 0.820099 | 8.200856e-53 | -8.615850e-47 |
| Msa0209140 | Msa1206230 | 0.800246 | 1.576685e-48 | -8.615850e-47 |
| Msa0221000 | Msa1206230 | 0.826493 | 2.632320e-54 | -8.615850e-47 |
| Msa0223230 | Msa1206230 | 0.827252 | 1.733675e-54 | -8.615850e-47 |
| Msa0225480 | Msa1206230 | 0.803158 | 3.982985e-49 | -8.615850e-47 |
| Msa0231630 | Msa1206230 | 0.821450 | 4.012795e-53 | -8.615850e-47 |
| Msa0238660 | Msa1206230 | 0.819863 | 9.288310e-53 | -8.615850e-47 |
| Msa0375640 | Msa1206230 | 0.809340 | 1.985946e-50 | -8.615850e-47 |
| Msa0378720 | Msa1206230 | 0.814086 | 1.842286e-51 | -8.615850e-47 |
| Msa0417970 | Msa1206230 | 0.802978 | 4.340941e-49 | -8.615850e-47 |
| Msa0424160 | Msa1206230 | 0.818260 | 2.151276e-52 | -8.615850e-47 |
| Msa0430260 | Msa1206230 | 0.825692 | 4.080752e-54 | -8.615850e-47 |
| Msa0435370 | Msa1206230 | 0.830739 | 2.478900e-55 | -8.615850e-47 |
| Msa0435420 | Msa1206230 | 0.834936 | 2.246525e-56 | -8.615850e-47 |
| Msa0435570 | Msa1206230 | 0.840171 | 1.021178e-57 | -8.615850e-47 |
| Msa0451070 | Msa1206230 | 0.803960 | 2.716396e-49 | -8.615850e-47 |
| Msa0474730 | Msa1206230 | 0.815520 | 8.862004e-52 | -8.615850e-47 |
| Msa0479200 | Msa1206230 | 0.817143 | 3.841197e-52 | -8.615850e-47 |
| Msa0982650 | Msa1206230 | 0.845549 | 3.790249e-59 | -8.615850e-47 |
| Msa1072940 | Msa1206230 | 0.828955 | 6.742475e-55 | -8.615850e-47 |
| Msa1076560 | Msa1206230 | 0.842818 | 2.050349e-58 | -8.615850e-47 |
| Msa1079230 | Msa1206230 | 0.807954 | 3.926894e-50 | -8.615850e-47 |
| Msa1085330 | Msa1206230 | 0.816562 | 5.187460e-52 | -8.615850e-47 |
| Msa0249540 | Msa1206230 | 0.810591 | 1.068095e-50 | -8.615850e-47 |
| Msa0276380 | Msa1206230 | 0.824199 | 9.186541e-54 | -8.615850e-47 |
| Msa0281470 | Msa1206230 | 0.845459 | 4.007718e-59 | -8.615850e-47 |
| Msa0307270 | Msa1206230 | 0.853262 | 2.684622e-61 | -8.615850e-47 |
| Msa0307570 | Msa1206230 | 0.819268 | 1.269636e-52 | -8.615850e-47 |
| Msa0341690 | Msa1206230 | 0.824334 | 8.537546e-54 | -8.615850e-47 |
| Msa1124950 | Msa1206230 | 0.804279 | 2.330950e-49 | -8.615850e-47 |
| Msa1130890 | Msa1206230 | 0.807626 | 4.610040e-50 | -8.615850e-47 |
| Msa1160920 | Msa1206230 | 0.822772 | 1.980491e-53 | -8.615850e-47 |
| Msa1169040 | Msa1206230 | 0.812520 | 4.069026e-51 | -8.615850e-47 |
| Msa1196640 | Msa1206230 | 0.805534 | 1.274682e-49 | -8.615850e-47 |
| Msa1204310 | Msa1206230 | 0.802510 | 5.422039e-49 | -8.615850e-47 |
| Msa1206200 | Msa1206230 | 0.830224 | 3.312274e-55 | -8.615850e-47 |
| Msa1206230 | Msa1256850 | 0.905000 | 6.812939e-80 | -8.615850e-47 |
| Msa1206230 | Msa1266810 | 0.818725 | 1.686986e-52 | -8.615850e-47 |
| Msa1206230 | Msa1288760 | 0.801554 | 8.526087e-49 | -8.615850e-47 |
| Msa1206230 | Msa1297970 | 0.991436 | 1.227968e-187 | -8.615850e-47 |
| Msa1206230 | Msa1305280 | 0.854385 | 1.274862e-61 | -8.615850e-47 |
| Msa1206230 | Msa1306640 | 0.836802 | 7.556696e-57 | -8.615850e-47 |
| Msa1206230 | Msa1348090 | 0.821950 | 3.074855e-53 | -8.615850e-47 |
| Msa1206230 | Msa1356830 | 0.800933 | 1.142404e-48 | -8.615850e-47 |
| Msa1206230 | Msa1371520 | 0.820222 | 7.686604e-53 | -8.615850e-47 |
| Msa1206230 | Msa1371910 | 0.870163 | 1.796156e-66 | -8.615850e-47 |
| Msa1206230 | Msa1373820 | 0.838266 | 3.185127e-57 | -8.615850e-47 |
| Msa1206230 | Msa1375280 | 0.845132 | 4.914658e-59 | -8.615850e-47 |
| Msa1206230 | Msa1385110 | 0.821099 | 4.834392e-53 | -8.615850e-47 |
| Msa1206230 | Msa1412000 | 0.818208 | 2.209475e-52 | -8.615850e-47 |
| Msa1206230 | Msa1414390 | 0.831507 | 1.605589e-55 | -8.615850e-47 |
| Msa1206230 | Msa1427110 | 0.854975 | 8.601807e-62 | -8.615850e-47 |
| Msa1206230 | Msa1432500 | 0.809698 | 1.663685e-50 | -8.615850e-47 |
| Msa1206230 | Msa1432920 | 0.828709 | 7.730548e-55 | -8.615850e-47 |
| Msa1206230 | Msa1437940 | 0.811306 | 7.478417e-51 | -8.615850e-47 |
| Msa1206230 | Msa1440960 | 0.811504 | 6.774819e-51 | -8.615850e-47 |
| Msa1206230 | Msa1459460 | 0.817768 | 2.778181e-52 | -8.615850e-47 |
| Msa0500380 | Msa1206230 | 0.828533 | 8.525740e-55 | -8.615850e-47 |
| Msa0515800 | Msa1206230 | 0.809614 | 1.734292e-50 | -8.615850e-47 |
| Msa0518030 | Msa1206230 | 0.813132 | 2.987738e-51 | -8.615850e-47 |
| Msa0519760 | Msa1206230 | 0.844625 | 6.730897e-59 | -8.615850e-47 |
| Msa0519810 | Msa1206230 | 0.851223 | 1.020662e-60 | -8.615850e-47 |
| Msa0519840 | Msa1206230 | 0.852720 | 3.835881e-61 | -8.615850e-47 |
| Msa0527190 | Msa1206230 | 0.807032 | 6.161939e-50 | -8.615850e-47 |
| Msa0581690 | Msa1206230 | 0.805038 | 1.619174e-49 | -8.615850e-47 |
| Msa0860620 | Msa1206230 | 0.805903 | 1.065925e-49 | -8.615850e-47 |
| Msa0880270 | Msa1206230 | 0.842826 | 2.039312e-58 | -8.615850e-47 |
| Msa0902360 | Msa1206230 | 0.825934 | 3.575598e-54 | -8.615850e-47 |
| Msa0937020 | Msa1206230 | 0.803737 | 3.022606e-49 | -8.615850e-47 |
| Msa0945190 | Msa1206230 | 0.806463 | 8.127942e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206230 | MtrunA17_Chr4g0055321 | 99.620 | 263 | 1 | 0 | 1 | 263 | 1 | 263 | 0.0 | 533 |
| Msa1206230 | MtrunA17_Chr2g0302561 | 65.370 | 257 | 84 | 2 | 7 | 260 | 7 | 261 | 1.89e-110 | 319 |
| Msa1206230 | MtrunA17_Chr4g0069271 | 64.202 | 257 | 87 | 2 | 7 | 260 | 7 | 261 | 2.16e-105 | 306 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1206230 | AT2G35190.1 | 75.564 | 266 | 59 | 3 | 1 | 262 | 1 | 264 | 3.17e-135 | 382 |
| Msa1206230 | AT3G17440.1 | 63.953 | 258 | 87 | 2 | 7 | 260 | 7 | 262 | 1.15e-107 | 313 |
| Msa1206230 | AT1G48240.1 | 63.178 | 258 | 89 | 2 | 7 | 260 | 7 | 262 | 4.48e-106 | 308 |
| Msa1206230 | AT1G48240.2 | 63.380 | 213 | 72 | 2 | 52 | 260 | 1 | 211 | 3.26e-84 | 251 |
| Msa1206230 | AT3G17440.2 | 61.353 | 207 | 76 | 1 | 7 | 209 | 7 | 213 | 4.33e-84 | 251 |
Find 73 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGCTCTCTCATGTTTC+AGG | 0.237882 | 8_1:+63196907 | None:intergenic |
| TAAATGAGGGACAATTGTTT+TGG | 0.239837 | 8_1:-63197084 | Msa1206230:three_prime_UTR |
| TTCTTCTGTGTCGCCTTCAT+TGG | 0.242708 | 8_1:+63200001 | None:intergenic |
| TGATTGATTACCGTTGAAAA+TGG | 0.262568 | 8_1:-63201395 | Msa1206230:exon |
| TCAGAAGCTGGAGAAAATTA+AGG | 0.285108 | 8_1:-63201191 | Msa1206230:CDS |
| AAGCCATTGAGAGGGGAAAA+AGG | 0.306993 | 8_1:-63199141 | Msa1206230:CDS |
| GTTCAAGACACGGTAAATAT+TGG | 0.323026 | 8_1:-63198222 | Msa1206230:CDS |
| TATAAAGAAAGCATCTAAAT+TGG | 0.326069 | 8_1:-63198018 | Msa1206230:CDS |
| TAAAGAAGTCAAAGCTTTAG+AGG | 0.333294 | 8_1:-63200426 | Msa1206230:CDS |
| TGCTACTGACAAGTGTATTA+TGG | 0.366980 | 8_1:-63197876 | Msa1206230:CDS |
| CTTCTGTTGTTCGTGACAAC+AGG | 0.367521 | 8_1:+63197157 | None:intergenic |
| AATAAATGCAGCACTCTGTT+TGG | 0.387247 | 8_1:-63201543 | Msa1206230:five_prime_UTR |
| AAGGGATCAAAAGCGCGTTT+AGG | 0.389328 | 8_1:+63201568 | None:intergenic |
| AAGGACATTCGCGACATTCC+AGG | 0.392891 | 8_1:-63197190 | Msa1206230:CDS |
| AGATCTGAATGAGGAAGGTT+TGG | 0.393793 | 8_1:+63201449 | None:intergenic |
| TGAGACTGCTGCAGCTCTTA+AGG | 0.393912 | 8_1:-63198196 | Msa1206230:CDS |
| TCGCGAATGTCCTTGTTCTC+TGG | 0.411929 | 8_1:+63197199 | None:intergenic |
| TCTTCTGTGTCGCCTTCATT+GGG | 0.414766 | 8_1:+63200002 | None:intergenic |
| TCTAAATTGGTCAAGGAAAT+CGG | 0.417319 | 8_1:-63198005 | Msa1206230:CDS |
| TAAGCGAATTGAACTCTTTG+AGG | 0.435458 | 8_1:-63200027 | Msa1206230:CDS |
| AAGAATAAACAAAACATTGT+TGG | 0.436069 | 8_1:+63201647 | None:intergenic |
| AATGTCAAATGAACAGCTAA+TGG | 0.436817 | 8_1:-63199197 | Msa1206230:CDS |
| ATTGTGTTGTTACATAATAG+TGG | 0.440547 | 8_1:-63196943 | Msa1206230:three_prime_UTR |
| GAAAATGTCTTGCTAGCTTC+CGG | 0.447441 | 8_1:-63199981 | Msa1206230:intron |
| AGAATAAACAAAACATTGTT+GGG | 0.455034 | 8_1:+63201648 | None:intergenic |
| AATGAACAGCTAATGGATCA+TGG | 0.468547 | 8_1:-63199190 | Msa1206230:CDS |
| AGAAAATGCGAGAGTGTAAA+GGG | 0.476625 | 8_1:-63201129 | Msa1206230:intron |
| CGATAGAGCGCGGAAATTGT+CGG | 0.478777 | 8_1:+63201321 | None:intergenic |
| CGAACAACAGAAGACTGCTT+TGG | 0.487369 | 8_1:-63197147 | Msa1206230:CDS |
| AGCTAATGGATCATGGGAAT+CGG | 0.490306 | 8_1:-63199183 | Msa1206230:CDS |
| AATTGCTATCATTATTGTAA+AGG | 0.494738 | 8_1:-63197825 | Msa1206230:intron |
| GAGAAAATGCGAGAGTGTAA+AGG | 0.497667 | 8_1:-63201130 | Msa1206230:CDS |
| AAGCGAATTGAACTCTTTGA+GGG | 0.501546 | 8_1:-63200026 | Msa1206230:CDS |
| CTCTTTGAGGGACCCAATGA+AGG | 0.509954 | 8_1:-63200014 | Msa1206230:CDS |
| GATTATTGGATTCTGTAATG+TGG | 0.515607 | 8_1:+63201501 | None:intergenic |
| CAGAAATGGATTTCAGAAGC+TGG | 0.516653 | 8_1:-63201203 | Msa1206230:CDS |
| AGTGCAAAATCTGACGGTTG+AGG | 0.520924 | 8_1:-63201419 | Msa1206230:five_prime_UTR |
| ACAACAGGAGGAGCTAATCC+TGG | 0.528610 | 8_1:+63197172 | None:intergenic |
| GAGTAGAAAGAGCAGGCAAT+TGG | 0.528613 | 8_1:-63201164 | Msa1206230:CDS |
| GAGCAGAGTTGTCAATGAGC+TGG | 0.530134 | 8_1:-63198057 | Msa1206230:CDS |
| TGCTGCAGCTCTTAAGGCAC+AGG | 0.531146 | 8_1:-63198190 | Msa1206230:intron |
| ATGAACAGCTAATGGATCAT+GGG | 0.537163 | 8_1:-63199189 | Msa1206230:CDS |
| GTTGAAAATGGATCAGTTGT+CGG | 0.540328 | 8_1:-63201383 | Msa1206230:exon |
| GGTCAAGGAAATCGGTAGGC+AGG | 0.545431 | 8_1:-63197997 | Msa1206230:intron |
| GTTGTTACATAATAGTGGAT+TGG | 0.547648 | 8_1:-63196938 | Msa1206230:three_prime_UTR |
| GATTGTGATGAACTTAAATG+AGG | 0.550199 | 8_1:-63197098 | Msa1206230:three_prime_UTR |
| GAGGATCTGGCGGAGATCGA+CGG | 0.558067 | 8_1:-63201352 | Msa1206230:CDS |
| GGATCATGGGAATCGGATGA+TGG | 0.561416 | 8_1:-63199176 | Msa1206230:CDS |
| GCTAAACAAACGAATCCTCT+CGG | 0.574048 | 8_1:-63196799 | Msa1206230:three_prime_UTR |
| GAAAGCATCTAAATTGGTCA+AGG | 0.580083 | 8_1:-63198012 | Msa1206230:CDS |
| TAAACAAAACATTGTTGGGT+CGG | 0.582811 | 8_1:+63201652 | None:intergenic |
| ACACAGATCAAGCCATTGAG+AGG | 0.592198 | 8_1:-63199150 | Msa1206230:CDS |
| ATTGTGATGAACTTAAATGA+GGG | 0.593340 | 8_1:-63197097 | Msa1206230:three_prime_UTR |
| CGGCGAGATCTGAATGAGGA+AGG | 0.595127 | 8_1:+63201444 | None:intergenic |
| CACAGATCAAGCCATTGAGA+GGG | 0.597880 | 8_1:-63199149 | Msa1206230:CDS |
| CTGTTGTTCGTGACAACAGG+AGG | 0.605031 | 8_1:+63197160 | None:intergenic |
| GGCGATCAGCGAGGATCTGG+CGG | 0.606362 | 8_1:-63201362 | Msa1206230:CDS |
| GTCAATCTTGTAATATACAG+CGG | 0.611557 | 8_1:-63196754 | Msa1206230:three_prime_UTR |
| GCCGTTAGTGCAAAATCTGA+CGG | 0.619243 | 8_1:-63201425 | Msa1206230:five_prime_UTR |
| TGGTTTGACGGCGATGACAA+TGG | 0.620641 | 8_1:-63196999 | Msa1206230:three_prime_UTR |
| ATATCAAGAATCAAATCAAG+CGG | 0.623736 | 8_1:-63201786 | None:intergenic |
| GCTTGTACATCCAGAGAACA+AGG | 0.635136 | 8_1:-63197209 | Msa1206230:CDS |
| AGGATGCGAGTAGAAAGAGC+AGG | 0.636628 | 8_1:-63201171 | Msa1206230:CDS |
| AATTGGTCAAGGAAATCGGT+AGG | 0.642065 | 8_1:-63198001 | Msa1206230:CDS |
| GCAATAGATTGTTCAAGACA+CGG | 0.645457 | 8_1:-63198232 | Msa1206230:intron |
| ACTAATAATCACGATTCACG+AGG | 0.655655 | 8_1:-63201697 | Msa1206230:five_prime_UTR |
| TAGATTCTTACGATAGAGCG+CGG | 0.658099 | 8_1:+63201311 | None:intergenic |
| CTAACGGCGAGATCTGAATG+AGG | 0.662619 | 8_1:+63201440 | None:intergenic |
| CAATTACTCCAATGACGATG+AGG | 0.668385 | 8_1:+63197843 | None:intergenic |
| ACAGATCAAGCCATTGAGAG+GGG | 0.669219 | 8_1:-63199148 | Msa1206230:CDS |
| CTAATAATCACGATTCACGA+GGG | 0.723400 | 8_1:-63201696 | Msa1206230:five_prime_UTR |
| TCAGTTGTCGGCGATCAGCG+AGG | 0.738571 | 8_1:-63201371 | Msa1206230:CDS |
| CAAACAACAAACAATCCGAG+AGG | 0.740636 | 8_1:+63196784 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTTTAGTATTTT+TGG | + | chr8_1:63196671-63196690 | None:intergenic | 10.0% |
| !!! | GATTTTATAATGTAGATTAT+TGG | + | chr8_1:63196931-63196950 | None:intergenic | 15.0% |
| !! | TGATTGTATAAAATTTATTC+TGG | - | chr8_1:63197528-63197547 | Msa1206230:intron | 15.0% |
| !!! | CTGTTTTCAATAATTTTAAA+AGG | - | chr8_1:63197825-63197844 | Msa1206230:intron | 15.0% |
| !! | CACTTTATATTTAGTAATTT+AGG | - | chr8_1:63198574-63198593 | Msa1206230:intron | 15.0% |
| !!! | AAAAAGTATGTATGTAAAAA+AGG | + | chr8_1:63198910-63198929 | None:intergenic | 15.0% |
| !! | TTAATATTAAAAGCAGAAAT+AGG | + | chr8_1:63199018-63199037 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGTGATATTCA+AGG | + | chr8_1:63199311-63199330 | None:intergenic | 15.0% |
| !! | AAATTGTCATAAGATATTTA+CGG | + | chr8_1:63199609-63199628 | None:intergenic | 15.0% |
| !!! | ATTCTTTAATTTAAATGAGA+AGG | + | chr8_1:63199655-63199674 | None:intergenic | 15.0% |
| !!! | TTTCTATATTTTGTTTTCAA+AGG | - | chr8_1:63199849-63199868 | Msa1206230:intron | 15.0% |
| !!! | TTATTATGTTGAAATTTTCT+CGG | - | chr8_1:63200890-63200909 | Msa1206230:intron | 15.0% |
| !! | AGTTCAAGAAAAATAATTAA+AGG | + | chr8_1:63201549-63201568 | None:intergenic | 15.0% |
| !!! | TTTTTATCTGTTTAATCATA+GGG | - | chr8_1:63201590-63201609 | Msa1206230:five_prime_UTR | 15.0% |
| !!! | TTTTTGGTTCTAAATGAATT+TGG | + | chr8_1:63196655-63196674 | None:intergenic | 20.0% |
| !! | AGAATAAACAAAACATTGTT+GGG | + | chr8_1:63196770-63196789 | None:intergenic | 20.0% |
| !! | AAGAATAAACAAAACATTGT+TGG | + | chr8_1:63196771-63196790 | None:intergenic | 20.0% |
| !!! | AGGATAATTTGATTTTTGAA+AGG | + | chr8_1:63196830-63196849 | None:intergenic | 20.0% |
| !!! | TTGATTTTTTTGTTCAGAAA+TGG | - | chr8_1:63197198-63197217 | Msa1206230:CDS | 20.0% |
| !!! | TTTTAGCTTAGAAACAATTT+TGG | - | chr8_1:63197696-63197715 | Msa1206230:intron | 20.0% |
| !! | AAAACAGAGTTATTTATGTT+TGG | + | chr8_1:63197812-63197831 | None:intergenic | 20.0% |
| !! | TAATCTAGTGTATATATTGT+TGG | - | chr8_1:63197933-63197952 | Msa1206230:intron | 20.0% |
| !!! | CTTTTTCTCATTCAAAAATT+TGG | + | chr8_1:63198036-63198055 | None:intergenic | 20.0% |
| !!! | ACTTCATGTTTTAAGTTTAT+TGG | - | chr8_1:63198131-63198150 | Msa1206230:intron | 20.0% |
| !! | ATATTTAGTAATTTAGGCAA+TGG | - | chr8_1:63198580-63198599 | Msa1206230:intron | 20.0% |
| !!! | AGTTAAAAATACCTGTATTT+TGG | - | chr8_1:63199065-63199084 | Msa1206230:intron | 20.0% |
| !!! | AAATGAAATACAAGCTATTT+TGG | - | chr8_1:63199119-63199138 | Msa1206230:intron | 20.0% |
| !! | TAAACAGATTAAATCTTCTT+TGG | + | chr8_1:63199158-63199177 | None:intergenic | 20.0% |
| !!! | ATTTAATCTGTTTACCATTT+TGG | - | chr8_1:63199164-63199183 | Msa1206230:CDS | 20.0% |
| !! | CAGTTAGTTAAGAAAATATA+TGG | - | chr8_1:63199454-63199473 | Msa1206230:intron | 20.0% |
| !! | TTGTATATGAATAAAAAGCA+AGG | + | chr8_1:63199741-63199760 | None:intergenic | 20.0% |
| !! | AGCTTAAATAAACTTGATAT+TGG | - | chr8_1:63199760-63199779 | Msa1206230:intron | 20.0% |
| !! | TATTTCATGTGGATAAAATT+TGG | - | chr8_1:63200125-63200144 | Msa1206230:intron | 20.0% |
| !!! | AAAATCAAGTTTTTTTTCCT+TGG | + | chr8_1:63200288-63200307 | None:intergenic | 20.0% |
| !!! | AAAAAAACTTGATTTTGACA+TGG | - | chr8_1:63200292-63200311 | Msa1206230:intron | 20.0% |
| !!! | AAAAAACTTGATTTTGACAT+GGG | - | chr8_1:63200293-63200312 | Msa1206230:intron | 20.0% |
| !! | ATGCTTTCTTTATAGAAAAA+TGG | + | chr8_1:63200391-63200410 | None:intergenic | 20.0% |
| !!! | TATAAAGAAAGCATCTAAAT+TGG | - | chr8_1:63200397-63200416 | Msa1206230:CDS | 20.0% |
| !! | AATGATTCATAAAGTAAGTT+AGG | + | chr8_1:63200485-63200504 | None:intergenic | 20.0% |
| !! | AATTGCTATCATTATTGTAA+AGG | - | chr8_1:63200590-63200609 | Msa1206230:intron | 20.0% |
| !! | TATCATTATTGTAAAGGTAA+GGG | - | chr8_1:63200596-63200615 | Msa1206230:intron | 20.0% |
| !!! | AAATTTGCTTTCTAACTTTT+TGG | - | chr8_1:63200619-63200638 | Msa1206230:intron | 20.0% |
| !! | ATACATACATAAACTAAAAG+CGG | + | chr8_1:63200868-63200887 | None:intergenic | 20.0% |
| !!! | AGAAAAATAATTAAAGGTAC+AGG | + | chr8_1:63201543-63201562 | None:intergenic | 20.0% |
| !!! | GTTTTTATCTGTTTAATCAT+AGG | - | chr8_1:63201589-63201608 | Msa1206230:five_prime_UTR | 20.0% |
| !!! | ATCAAGTATTTTTGTAAGAA+CGG | + | chr8_1:63201702-63201721 | None:intergenic | 20.0% |
| ! | AAAAATCACATTGATCTTTC+AGG | + | chr8_1:63197461-63197480 | None:intergenic | 25.0% |
| ! | TATGTTTGTGTTTGATTATG+TGG | - | chr8_1:63197480-63197499 | Msa1206230:intron | 25.0% |
| ! | AGGTAAAAGTGATATATGTT+CGG | - | chr8_1:63197570-63197589 | Msa1206230:intron | 25.0% |
| ! | GGATGCATTTATATAAAAGT+GGG | - | chr8_1:63197591-63197610 | Msa1206230:intron | 25.0% |
| ! | AAGTTAAAAGTCAATTGTAG+AGG | - | chr8_1:63197660-63197679 | Msa1206230:intron | 25.0% |
| !!! | TACTCCTTTAGAATCAATTT+AGG | - | chr8_1:63197769-63197788 | Msa1206230:intron | 25.0% |
| !! | TTGATTGTTTGATTCCATTT+TGG | - | chr8_1:63197848-63197867 | Msa1206230:CDS | 25.0% |
| ! | ACATGAAGTAGCAAAATTAA+GGG | + | chr8_1:63198120-63198139 | None:intergenic | 25.0% |
| ! | AACATGAAGTAGCAAAATTA+AGG | + | chr8_1:63198121-63198140 | None:intergenic | 25.0% |
| ! | CTAGTGAAATAAAATGATCA+TGG | + | chr8_1:63198532-63198551 | None:intergenic | 25.0% |
| !!! | CATGATCATTTTATTTCACT+AGG | - | chr8_1:63198530-63198549 | Msa1206230:intron | 25.0% |
| ! | ATAAATCAAGCATAACAAGA+AGG | + | chr8_1:63198652-63198671 | None:intergenic | 25.0% |
| ! | ACTTCTGCATTATTTCATAT+TGG | - | chr8_1:63198777-63198796 | Msa1206230:intron | 25.0% |
| ! | CTTCTGCATTATTTCATATT+GGG | - | chr8_1:63198778-63198797 | Msa1206230:intron | 25.0% |
| !! | AAATTACTTCCGACTTTTAA+AGG | + | chr8_1:63199098-63199117 | None:intergenic | 25.0% |
| !!! | GTTTACCATTTTGGTTAATT+TGG | - | chr8_1:63199173-63199192 | Msa1206230:CDS | 25.0% |
| !!! | TAGTATTTTATTTGTCCTAG+AGG | - | chr8_1:63199375-63199394 | Msa1206230:intron | 25.0% |
| ! | TTTGACCTTCAAGTAATATA+TGG | - | chr8_1:63199510-63199529 | Msa1206230:intron | 25.0% |
| ! | AAAGACCATATATTACTTGA+AGG | + | chr8_1:63199518-63199537 | None:intergenic | 25.0% |
| ! | TATGAATAAAAAGCAAGGTT+GGG | + | chr8_1:63199736-63199755 | None:intergenic | 25.0% |
| ! | ATATGAATAAAAAGCAAGGT+TGG | + | chr8_1:63199737-63199756 | None:intergenic | 25.0% |
| ! | ATTGGATTATTGCTAAATCA+TGG | - | chr8_1:63199778-63199797 | Msa1206230:intron | 25.0% |
| !! | TGCAATTGTGGTTTAATTTA+AGG | + | chr8_1:63199988-63200007 | None:intergenic | 25.0% |
| ! | GAGAACTGAAAAATACTAAA+TGG | - | chr8_1:63200062-63200081 | Msa1206230:intron | 25.0% |
| ! | CTATCATTATTGTAAAGGTA+AGG | - | chr8_1:63200595-63200614 | Msa1206230:intron | 25.0% |
| !!! | TTCTTGAATCTAGTTTTACA+AGG | + | chr8_1:63201086-63201105 | None:intergenic | 25.0% |
| ! | AATCAGTAAAATAAGCAGTT+TGG | + | chr8_1:63201121-63201140 | None:intergenic | 25.0% |
| ! | ATTGTGATGAACTTAAATGA+GGG | - | chr8_1:63201318-63201337 | Msa1206230:intron | 25.0% |
| !! | ATTGTGTTGTTACATAATAG+TGG | - | chr8_1:63201472-63201491 | Msa1206230:five_prime_UTR | 25.0% |
| TAAACAAAACATTGTTGGGT+CGG | + | chr8_1:63196766-63196785 | None:intergenic | 30.0% | |
| !!! | GAGTGCTGCATTTATTTTAA+GGG | + | chr8_1:63196868-63196887 | None:intergenic | 30.0% |
| !!! | AGAGTGCTGCATTTATTTTA+AGG | + | chr8_1:63196869-63196888 | None:intergenic | 30.0% |
| GATTATTGGATTCTGTAATG+TGG | + | chr8_1:63196917-63196936 | None:intergenic | 30.0% | |
| TGATTGATTACCGTTGAAAA+TGG | - | chr8_1:63197020-63197039 | Msa1206230:three_prime_UTR | 30.0% | |
| ! | CTTGATGTTGTTCGTTTTAT+TGG | - | chr8_1:63197375-63197394 | Msa1206230:intron | 30.0% |
| !! | CATTGATCTTTCAGGTTAAT+AGG | + | chr8_1:63197453-63197472 | None:intergenic | 30.0% |
| !!! | GCTGAAAATGAGTTGATTTT+AGG | - | chr8_1:63197550-63197569 | Msa1206230:intron | 30.0% |
| CGGATGCATTTATATAAAAG+TGG | - | chr8_1:63197590-63197609 | Msa1206230:intron | 30.0% | |
| ! | TGAGCCTAAATTGATTCTAA+AGG | + | chr8_1:63197776-63197795 | None:intergenic | 30.0% |
| AATTTAGGCTCATCTAAAAG+TGG | - | chr8_1:63197784-63197803 | Msa1206230:intron | 30.0% | |
| !!! | TTGTTGGATCTGTTTTTTTC+AGG | - | chr8_1:63197949-63197968 | Msa1206230:intron | 30.0% |
| ! | TAAAGAAGTCAAAGCTTTAG+AGG | - | chr8_1:63197989-63198008 | Msa1206230:intron | 30.0% |
| CATGAAGTAGCAAAATTAAG+GGG | + | chr8_1:63198119-63198138 | None:intergenic | 30.0% | |
| GAACAAAATGAGAGATTCTA+AGG | + | chr8_1:63198280-63198299 | None:intergenic | 30.0% | |
| !! | AGTTACTCAGTTTTTAGACA+AGG | - | chr8_1:63198614-63198633 | Msa1206230:intron | 30.0% |
| CATTATTTCATATTGGGAGA+TGG | - | chr8_1:63198784-63198803 | Msa1206230:intron | 30.0% | |
| TGTTTCAGCTATTGTTTGAA+GGG | - | chr8_1:63198986-63199005 | Msa1206230:intron | 30.0% | |
| ATTAAATCTTCTTTGGTCAG+TGG | + | chr8_1:63199151-63199170 | None:intergenic | 30.0% | |
| ATGCTCCAAATTAACCAAAA+TGG | + | chr8_1:63199181-63199200 | None:intergenic | 30.0% | |
| AATGTCAAATGAACAGCTAA+TGG | - | chr8_1:63199218-63199237 | Msa1206230:intron | 30.0% | |
| TTTCCAAATACATAGACTAC+TGG | - | chr8_1:63199334-63199353 | Msa1206230:intron | 30.0% | |
| AAGTAAGCAAGCATAATATG+TGG | + | chr8_1:63199415-63199434 | None:intergenic | 30.0% | |
| TTAGAGCACAATTTAATTGC+TGG | - | chr8_1:63199480-63199499 | Msa1206230:intron | 30.0% | |
| ! | TTTTTGTCAAACTGTTGTCT+TGG | - | chr8_1:63199540-63199559 | Msa1206230:intron | 30.0% |
| GACGGTACTAAATAAACAAT+AGG | + | chr8_1:63199572-63199591 | None:intergenic | 30.0% | |
| ATCATGGAATCAGTGAAATA+AGG | - | chr8_1:63199794-63199813 | Msa1206230:intron | 30.0% | |
| ! | AATAAGGATGAAAAAGTGTG+AGG | - | chr8_1:63199810-63199829 | Msa1206230:intron | 30.0% |
| ! | CTACTCAATTTAAGACTACA+AGG | + | chr8_1:63199900-63199919 | None:intergenic | 30.0% |
| !! | GGTGTTTGATTTGAATATTC+TGG | - | chr8_1:63200083-63200102 | Msa1206230:intron | 30.0% |
| ATTCTGTTGTCTATTTCATG+TGG | - | chr8_1:63200114-63200133 | Msa1206230:intron | 30.0% | |
| TTGAACAATCTATTGCAGAA+GGG | + | chr8_1:63200179-63200198 | None:intergenic | 30.0% | |
| TCTAAATTGGTCAAGGAAAT+CGG | - | chr8_1:63200410-63200429 | Msa1206230:CDS | 30.0% | |
| CTATACTGAACAAAATGATG+TGG | + | chr8_1:63200460-63200479 | None:intergenic | 30.0% | |
| GTACTTCATGGTGAATTTAT+TGG | - | chr8_1:63200672-63200691 | Msa1206230:intron | 30.0% | |
| ATTTCTACCATAGGTAAACA+TGG | + | chr8_1:63200710-63200729 | None:intergenic | 30.0% | |
| ! | AAACTCTATTCAGTGCTTTT+TGG | - | chr8_1:63200953-63200972 | Msa1206230:intron | 30.0% |
| !! | AACTCTATTCAGTGCTTTTT+GGG | - | chr8_1:63200954-63200973 | Msa1206230:intron | 30.0% |
| GGCGTTTACAAAAAGAAAAT+TGG | + | chr8_1:63201046-63201065 | None:intergenic | 30.0% | |
| GATTGTGATGAACTTAAATG+AGG | - | chr8_1:63201317-63201336 | Msa1206230:intron | 30.0% | |
| ! | TAAATGAGGGACAATTGTTT+TGG | - | chr8_1:63201331-63201350 | Msa1206230:CDS | 30.0% |
| ! | AAATGAGGGACAATTGTTTT+GGG | - | chr8_1:63201332-63201351 | Msa1206230:CDS | 30.0% |
| !!! | CATATTGATTTTGTGCTCTT+TGG | - | chr8_1:63201396-63201415 | Msa1206230:exon | 30.0% |
| !! | GTTGTTACATAATAGTGGAT+TGG | - | chr8_1:63201477-63201496 | Msa1206230:five_prime_UTR | 30.0% |
| GTCAATCTTGTAATATACAG+CGG | - | chr8_1:63201661-63201680 | Msa1206230:five_prime_UTR | 30.0% | |
| ACTAATAATCACGATTCACG+AGG | - | chr8_1:63196718-63196737 | Msa1206230:three_prime_UTR | 35.0% | |
| CTAATAATCACGATTCACGA+GGG | - | chr8_1:63196719-63196738 | Msa1206230:three_prime_UTR | 35.0% | |
| AATAAATGCAGCACTCTGTT+TGG | - | chr8_1:63196872-63196891 | Msa1206230:three_prime_UTR | 35.0% | |
| ! | GACAACTGATCCATTTTCAA+CGG | + | chr8_1:63197033-63197052 | None:intergenic | 35.0% |
| GTTGAAAATGGATCAGTTGT+CGG | - | chr8_1:63197032-63197051 | Msa1206230:three_prime_UTR | 35.0% | |
| TGAAGGGGAAATCAAAACAA+TGG | + | chr8_1:63197140-63197159 | None:intergenic | 35.0% | |
| CATGAGACAGAAATTTGAAG+GGG | + | chr8_1:63197155-63197174 | None:intergenic | 35.0% | |
| GCATGAGACAGAAATTTGAA+GGG | + | chr8_1:63197156-63197175 | None:intergenic | 35.0% | |
| TGCATGAGACAGAAATTTGA+AGG | + | chr8_1:63197157-63197176 | None:intergenic | 35.0% | |
| TCAGAAGCTGGAGAAAATTA+AGG | - | chr8_1:63197224-63197243 | Msa1206230:intron | 35.0% | |
| ! | TTTACACTCTCGCATTTTCT+CGG | + | chr8_1:63197286-63197305 | None:intergenic | 35.0% |
| ! | AGAAAATGCGAGAGTGTAAA+GGG | - | chr8_1:63197286-63197305 | Msa1206230:intron | 35.0% |
| !! | GTTTGATTCCATTTTGGCAT+TGG | - | chr8_1:63197854-63197873 | Msa1206230:CDS | 35.0% |
| GTAATTCAAGGATCAAAGCT+TGG | + | chr8_1:63197887-63197906 | None:intergenic | 35.0% | |
| CCACTAATCATGGTAATTCA+AGG | + | chr8_1:63197899-63197918 | None:intergenic | 35.0% | |
| CCTTGAATTACCATGATTAG+TGG | - | chr8_1:63197896-63197915 | Msa1206230:intron | 35.0% | |
| AATTACCATGATTAGTGGTC+TGG | - | chr8_1:63197901-63197920 | Msa1206230:intron | 35.0% | |
| GAATGAGAAAAAGCAGTCAA+TGG | - | chr8_1:63198043-63198062 | Msa1206230:CDS | 35.0% | |
| ! | AATGGTAAGATGTTTAGCTC+TGG | - | chr8_1:63198061-63198080 | Msa1206230:CDS | 35.0% |
| ! | GAGATTCTAAGGAAGCAAAA+TGG | + | chr8_1:63198269-63198288 | None:intergenic | 35.0% |
| ! | TCATTTTGTTCTTGCTTGAG+TGG | - | chr8_1:63198289-63198308 | Msa1206230:intron | 35.0% |
| ! | CTTACTTGTTGATGCTATCA+AGG | + | chr8_1:63198323-63198342 | None:intergenic | 35.0% |
| TAAGCGAATTGAACTCTTTG+AGG | - | chr8_1:63198388-63198407 | Msa1206230:intron | 35.0% | |
| AAGCGAATTGAACTCTTTGA+GGG | - | chr8_1:63198389-63198408 | Msa1206230:intron | 35.0% | |
| ATAACAAGAAGGTAGAAGCA+CGG | + | chr8_1:63198641-63198660 | None:intergenic | 35.0% | |
| ATTGTGACTGTATGTATGAG+CGG | - | chr8_1:63198704-63198723 | Msa1206230:intron | 35.0% | |
| ! | AGATCATAGAAGTGTGAGAA+AGG | + | chr8_1:63198883-63198902 | None:intergenic | 35.0% |
| CTGTTTCAGCTATTGTTTGA+AGG | - | chr8_1:63198985-63199004 | Msa1206230:intron | 35.0% | |
| GTTTCAGCTATTGTTTGAAG+GGG | - | chr8_1:63198987-63199006 | Msa1206230:intron | 35.0% | |
| TTTCAGCTATTGTTTGAAGG+GGG | - | chr8_1:63198988-63199007 | Msa1206230:intron | 35.0% | |
| ! | AATGAACAGCTAATGGATCA+TGG | - | chr8_1:63199225-63199244 | Msa1206230:intron | 35.0% |
| ! | ATGAACAGCTAATGGATCAT+GGG | - | chr8_1:63199226-63199245 | Msa1206230:intron | 35.0% |
| TCACCAGTAGTCTATGTATT+TGG | + | chr8_1:63199340-63199359 | None:intergenic | 35.0% | |
| AATAAAAAGCAAGGTTGGGA+AGG | + | chr8_1:63199732-63199751 | None:intergenic | 35.0% | |
| TTGTTATACATACACCTCCT+TGG | - | chr8_1:63199925-63199944 | Msa1206230:intron | 35.0% | |
| TGTTATACATACACCTCCTT+GGG | - | chr8_1:63199926-63199945 | Msa1206230:intron | 35.0% | |
| ! | ATATTTTCCACATGTACCCA+AGG | + | chr8_1:63199945-63199964 | None:intergenic | 35.0% |
| ACTGTACATCAAACTTCTAG+AGG | + | chr8_1:63200029-63200048 | None:intergenic | 35.0% | |
| TCTAGAAGTTTGATGTACAG+TGG | - | chr8_1:63200028-63200047 | Msa1206230:CDS | 35.0% | |
| CTTGAACAATCTATTGCAGA+AGG | + | chr8_1:63200180-63200199 | None:intergenic | 35.0% | |
| GCAATAGATTGTTCAAGACA+CGG | - | chr8_1:63200183-63200202 | Msa1206230:intron | 35.0% | |
| GTTCAAGACACGGTAAATAT+TGG | - | chr8_1:63200193-63200212 | Msa1206230:CDS | 35.0% | |
| ! | TTTTTCCTTGGACTACTTCT+GGG | + | chr8_1:63200276-63200295 | None:intergenic | 35.0% |
| !!! | TTTTTTCCTTGGACTACTTC+TGG | + | chr8_1:63200277-63200296 | None:intergenic | 35.0% |
| !! | TGATTTTGACATGGGTACTA+AGG | - | chr8_1:63200301-63200320 | Msa1206230:intron | 35.0% |
| !! | GATTTTGACATGGGTACTAA+GGG | - | chr8_1:63200302-63200321 | Msa1206230:intron | 35.0% |
| ! | TAACCTCTTCCTTTTGTAGA+CGG | - | chr8_1:63200328-63200347 | Msa1206230:intron | 35.0% |
| TCATTTGTTCCGTCTACAAA+AGG | + | chr8_1:63200340-63200359 | None:intergenic | 35.0% | |
| !! | GAAAGCATCTAAATTGGTCA+AGG | - | chr8_1:63200403-63200422 | Msa1206230:CDS | 35.0% |
| ! | CTTGCTCGCATTTTTGTAAT+AGG | - | chr8_1:63200515-63200534 | Msa1206230:intron | 35.0% |
| TGCTACTGACAAGTGTATTA+TGG | - | chr8_1:63200539-63200558 | Msa1206230:intron | 35.0% | |
| !! | TTACTTTTCCTCATCGTCAT+TGG | - | chr8_1:63200564-63200583 | Msa1206230:intron | 35.0% |
| TGAAGTACAGCAACAATAGA+GGG | + | chr8_1:63200660-63200679 | None:intergenic | 35.0% | |
| ATGAAGTACAGCAACAATAG+AGG | + | chr8_1:63200661-63200680 | None:intergenic | 35.0% | |
| TCTATTGTTGCTGTACTTCA+TGG | - | chr8_1:63200660-63200679 | Msa1206230:intron | 35.0% | |
| GTCAAAGCAATTTCTACCAT+AGG | + | chr8_1:63200719-63200738 | None:intergenic | 35.0% | |
| AAAAGCGGTAAATCTGTGAA+AGG | + | chr8_1:63200853-63200872 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGGTTGTTAACAGA+CGG | - | chr8_1:63200968-63200987 | Msa1206230:intron | 35.0% |
| TACAAGGTAAACTGAAACCA+AGG | + | chr8_1:63201070-63201089 | None:intergenic | 35.0% | |
| !!! | TTTTGTGCTCTTTGGTTTGA+CGG | - | chr8_1:63201404-63201423 | Msa1206230:five_prime_UTR | 35.0% |
| ATAATGCTCTCTCATGTTTC+AGG | + | chr8_1:63201511-63201530 | None:intergenic | 35.0% | |
| ! | CTGAACAATTTTTACTCGAC+AGG | - | chr8_1:63201567-63201586 | Msa1206230:five_prime_UTR | 35.0% |
| AGATCTGAATGAGGAAGGTT+TGG | + | chr8_1:63196969-63196988 | None:intergenic | 40.0% | |
| ! | ACCGTCAGATTTTGCACTAA+CGG | + | chr8_1:63196994-63197013 | None:intergenic | 40.0% |
| TAGATTCTTACGATAGAGCG+CGG | + | chr8_1:63197107-63197126 | None:intergenic | 40.0% | |
| AGGGGAAATCAAAACAATGG+AGG | + | chr8_1:63197137-63197156 | None:intergenic | 40.0% | |
| ! | CAGAAATGGATTTCAGAAGC+TGG | - | chr8_1:63197212-63197231 | Msa1206230:intron | 40.0% |
| ! | GAGAAAATGCGAGAGTGTAA+AGG | - | chr8_1:63197285-63197304 | Msa1206230:intron | 40.0% |
| ! | GCACATTTTCAACACAGATC+TGG | + | chr8_1:63197425-63197444 | None:intergenic | 40.0% |
| ! | GAAAATGTCTTGCTAGCTTC+CGG | - | chr8_1:63198434-63198453 | Msa1206230:intron | 40.0% |
| ! | TAACAAGAAGGTAGAAGCAC+GGG | + | chr8_1:63198640-63198659 | None:intergenic | 40.0% |
| TGCTTGATTTATACGACTCG+TGG | - | chr8_1:63198660-63198679 | Msa1206230:intron | 40.0% | |
| CACTTTCACTGAAACGATTG+AGG | + | chr8_1:63198736-63198755 | None:intergenic | 40.0% | |
| AAGGTTGACAGCCAAAATAC+AGG | + | chr8_1:63199079-63199098 | None:intergenic | 40.0% | |
| ! | GGCTGTCAACCTTTAAAAGT+CGG | - | chr8_1:63199086-63199105 | Msa1206230:intron | 40.0% |
| ! | AGCTAATGGATCATGGGAAT+CGG | - | chr8_1:63199232-63199251 | Msa1206230:intron | 40.0% |
| ! | GATGAAAAAGTGTGAGGAAG+TGG | - | chr8_1:63199816-63199835 | Msa1206230:intron | 40.0% |
| ! | TTTTCCTTGGACTACTTCTG+GGG | + | chr8_1:63200275-63200294 | None:intergenic | 40.0% |
| AATTGGTCAAGGAAATCGGT+AGG | - | chr8_1:63200414-63200433 | Msa1206230:CDS | 40.0% | |
| CAATTACTCCAATGACGATG+AGG | + | chr8_1:63200575-63200594 | None:intergenic | 40.0% | |
| TAGGTAAACATGGCACATCT+AGG | + | chr8_1:63200700-63200719 | None:intergenic | 40.0% | |
| AGATGTGCCATGTTTACCTA+TGG | - | chr8_1:63200700-63200719 | Msa1206230:intron | 40.0% | |
| GAAATTGCTTTGACAACACG+TGG | - | chr8_1:63200725-63200744 | Msa1206230:intron | 40.0% | |
| !! | AGTGGAGGAGTTCTTTTTCA+TGG | + | chr8_1:63200802-63200821 | None:intergenic | 40.0% |
| ! | TCACTAGGCATAGCTTTTGA+TGG | - | chr8_1:63200827-63200846 | Msa1206230:intron | 40.0% |
| ! | TCTTTTTGTAAACGCCACCT+TGG | - | chr8_1:63201050-63201069 | Msa1206230:intron | 40.0% |
| AAGGTAAACTGAAACCAAGG+TGG | + | chr8_1:63201067-63201086 | None:intergenic | 40.0% | |
| !!! | TTGTTTTGGGAACACACACA+AGG | - | chr8_1:63201345-63201364 | Msa1206230:CDS | 40.0% |
| GCTAAACAAACGAATCCTCT+CGG | - | chr8_1:63201616-63201635 | Msa1206230:five_prime_UTR | 40.0% | |
| CAAACAACAAACAATCCGAG+AGG | + | chr8_1:63201634-63201653 | None:intergenic | 40.0% | |
| ! | AAGGGATCAAAAGCGCGTTT+AGG | + | chr8_1:63196850-63196869 | None:intergenic | 45.0% |
| GCCGTTAGTGCAAAATCTGA+CGG | - | chr8_1:63196990-63197009 | Msa1206230:three_prime_UTR | 45.0% | |
| AGTGCAAAATCTGACGGTTG+AGG | - | chr8_1:63196996-63197015 | Msa1206230:three_prime_UTR | 45.0% | |
| GAGTAGAAAGAGCAGGCAAT+TGG | - | chr8_1:63197251-63197270 | Msa1206230:intron | 45.0% | |
| GTGTGCTTCCAATGCCAAAA+TGG | + | chr8_1:63197865-63197884 | None:intergenic | 45.0% | |
| AAGAGCCAGACCACTAATCA+TGG | + | chr8_1:63197909-63197928 | None:intergenic | 45.0% | |
| TCTTCTGTGTCGCCTTCATT+GGG | + | chr8_1:63198416-63198435 | None:intergenic | 45.0% | |
| TTCTTCTGTGTCGCCTTCAT+TGG | + | chr8_1:63198417-63198436 | None:intergenic | 45.0% | |
| GAAGAAGCCAGCATACTTAC+CGG | + | chr8_1:63198456-63198475 | None:intergenic | 45.0% | |
| ACACAGATCAAGCCATTGAG+AGG | - | chr8_1:63199265-63199284 | Msa1206230:intron | 45.0% | |
| CACAGATCAAGCCATTGAGA+GGG | - | chr8_1:63199266-63199285 | Msa1206230:intron | 45.0% | |
| ACAGATCAAGCCATTGAGAG+GGG | - | chr8_1:63199267-63199286 | Msa1206230:intron | 45.0% | |
| AAGCCATTGAGAGGGGAAAA+AGG | - | chr8_1:63199274-63199293 | Msa1206230:intron | 45.0% | |
| AGCCATTGAGAGGGGAAAAA+GGG | - | chr8_1:63199275-63199294 | Msa1206230:intron | 45.0% | |
| ! | AACCCTTTTTCCCCTCTCAA+TGG | + | chr8_1:63199280-63199299 | None:intergenic | 45.0% |
| ATTGAGAGGGGAAAAAGGGT+TGG | - | chr8_1:63199279-63199298 | Msa1206230:intron | 45.0% | |
| GAGCTACAACATTTGCCTCT+AGG | + | chr8_1:63199393-63199412 | None:intergenic | 45.0% | |
| ACGGAAGTAAACTGACGAGA+CGG | + | chr8_1:63199590-63199609 | None:intergenic | 45.0% | |
| GGTTGGGAAGGTAATGTTTC+AGG | + | chr8_1:63199720-63199739 | None:intergenic | 45.0% | |
| ! | TTTTCCACATGTACCCAAGG+AGG | + | chr8_1:63199942-63199961 | None:intergenic | 45.0% |
| ! | AAACTTCTAGAGGAGCAGAG+GGG | + | chr8_1:63200019-63200038 | None:intergenic | 45.0% |
| ! | CAAACTTCTAGAGGAGCAGA+GGG | + | chr8_1:63200020-63200039 | None:intergenic | 45.0% |
| ! | TCAAACTTCTAGAGGAGCAG+AGG | + | chr8_1:63200021-63200040 | None:intergenic | 45.0% |
| GTTCCGTCTACAAAAGGAAG+AGG | + | chr8_1:63200334-63200353 | None:intergenic | 45.0% | |
| CTATGCCTAGTGAAGACTAG+TGG | + | chr8_1:63200820-63200839 | None:intergenic | 45.0% | |
| GTTAACAGACGGTCAAGATC+AGG | - | chr8_1:63200979-63200998 | Msa1206230:intron | 45.0% | |
| GCTTGTACATCCAGAGAACA+AGG | - | chr8_1:63201206-63201225 | Msa1206230:intron | 45.0% | |
| CTTCTGTTGTTCGTGACAAC+AGG | + | chr8_1:63201261-63201280 | None:intergenic | 45.0% | |
| CGAACAACAGAAGACTGCTT+TGG | - | chr8_1:63201268-63201287 | Msa1206230:intron | 45.0% | |
| CTAACGGCGAGATCTGAATG+AGG | + | chr8_1:63196978-63196997 | None:intergenic | 50.0% | |
| CGATAGAGCGCGGAAATTGT+CGG | + | chr8_1:63197097-63197116 | None:intergenic | 50.0% | |
| AGGATGCGAGTAGAAAGAGC+AGG | - | chr8_1:63197244-63197263 | Msa1206230:intron | 50.0% | |
| ! | CTCTTTGAGGGACCCAATGA+AGG | - | chr8_1:63198401-63198420 | Msa1206230:intron | 50.0% |
| CTAGCTTCCGGTAAGTATGC+TGG | - | chr8_1:63198446-63198465 | Msa1206230:intron | 50.0% | |
| GTGACTGTATGTATGAGCGG+AGG | - | chr8_1:63198707-63198726 | Msa1206230:intron | 50.0% | |
| AGCTATTGTTTGAAGGGGGC+TGG | - | chr8_1:63198992-63199011 | Msa1206230:intron | 50.0% | |
| GGATCATGGGAATCGGATGA+TGG | - | chr8_1:63199239-63199258 | Msa1206230:intron | 50.0% | |
| TACACCTCCTTGGGTACATG+TGG | - | chr8_1:63199935-63199954 | Msa1206230:intron | 50.0% | |
| TGAGACTGCTGCAGCTCTTA+AGG | - | chr8_1:63200219-63200238 | Msa1206230:intron | 50.0% | |
| !! | TTGGACTACTTCTGGGGTGA+AGG | + | chr8_1:63200269-63200288 | None:intergenic | 50.0% |
| TTCACCCCAGAAGTAGTCCA+AGG | - | chr8_1:63200268-63200287 | Msa1206230:intron | 50.0% | |
| GAGCAGAGTTGTCAATGAGC+TGG | - | chr8_1:63200358-63200377 | Msa1206230:intron | 50.0% | |
| !! | CTCCTCCACTAGTCTTCACT+AGG | - | chr8_1:63200812-63200831 | Msa1206230:intron | 50.0% |
| TGCCTAGTGAAGACTAGTGG+AGG | + | chr8_1:63200817-63200836 | None:intergenic | 50.0% | |
| TCGCGAATGTCCTTGTTCTC+TGG | + | chr8_1:63201219-63201238 | None:intergenic | 50.0% | |
| AAGGACATTCGCGACATTCC+AGG | - | chr8_1:63201225-63201244 | Msa1206230:intron | 50.0% | |
| ACAACAGGAGGAGCTAATCC+TGG | + | chr8_1:63201246-63201265 | None:intergenic | 50.0% | |
| CTGTTGTTCGTGACAACAGG+AGG | + | chr8_1:63201258-63201277 | None:intergenic | 50.0% | |
| TGGTTTGACGGCGATGACAA+TGG | - | chr8_1:63201416-63201435 | Msa1206230:five_prime_UTR | 50.0% | |
| CGGCGAGATCTGAATGAGGA+AGG | + | chr8_1:63196974-63196993 | None:intergenic | 55.0% | |
| GGGGACATGGAGTGCAATTG+TGG | + | chr8_1:63200000-63200019 | None:intergenic | 55.0% | |
| TGCTGCAGCTCTTAAGGCAC+AGG | - | chr8_1:63200225-63200244 | Msa1206230:intron | 55.0% | |
| GGTCAAGGAAATCGGTAGGC+AGG | - | chr8_1:63200418-63200437 | Msa1206230:CDS | 55.0% | |
| TCAGTTGTCGGCGATCAGCG+AGG | - | chr8_1:63197044-63197063 | Msa1206230:three_prime_UTR | 60.0% | |
| GAGGATCTGGCGGAGATCGA+CGG | - | chr8_1:63197063-63197082 | Msa1206230:three_prime_UTR | 60.0% | |
| CTAGAGGAGCAGAGGGGACA+TGG | + | chr8_1:63200013-63200032 | None:intergenic | 60.0% | |
| GTCGGCGATCAGCGAGGATC+TGG | - | chr8_1:63197050-63197069 | Msa1206230:three_prime_UTR | 65.0% | |
| GGCGATCAGCGAGGATCTGG+CGG | - | chr8_1:63197053-63197072 | Msa1206230:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 63196639 | 63201798 | 63196639 | ID=Msa1206230;Name=Msa1206230 |
| chr8_1 | mRNA | 63196639 | 63201798 | 63196639 | ID=Msa1206230-mRNA-1;Parent=Msa1206230;Name=Msa1206230-mRNA-1;_AED=0.13;_eAED=0.13;_QI=400|1|1|1|1|1|10|487|266 |
| chr8_1 | exon | 63196639 | 63197230 | 63196639 | ID=Msa1206230-mRNA-1:exon:20502;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63197826 | 63197900 | 63197826 | ID=Msa1206230-mRNA-1:exon:20501;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63197998 | 63198090 | 63197998 | ID=Msa1206230-mRNA-1:exon:20500;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63198191 | 63198247 | 63198191 | ID=Msa1206230-mRNA-1:exon:20499;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63199141 | 63199220 | 63199141 | ID=Msa1206230-mRNA-1:exon:20498;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63199982 | 63200070 | 63199982 | ID=Msa1206230-mRNA-1:exon:20497;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63200185 | 63200222 | 63200185 | ID=Msa1206230-mRNA-1:exon:20496;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63200373 | 63200466 | 63200373 | ID=Msa1206230-mRNA-1:exon:20495;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63201130 | 63201222 | 63201130 | ID=Msa1206230-mRNA-1:exon:20494;Parent=Msa1206230-mRNA-1 |
| chr8_1 | exon | 63201322 | 63201798 | 63201322 | ID=Msa1206230-mRNA-1:exon:20493;Parent=Msa1206230-mRNA-1 |
| chr8_1 | five_prime_UTR | 63201399 | 63201798 | 63201399 | ID=Msa1206230-mRNA-1:five_prime_utr;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63201322 | 63201398 | 63201322 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63201130 | 63201222 | 63201130 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63200373 | 63200466 | 63200373 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63200185 | 63200222 | 63200185 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63199982 | 63200070 | 63199982 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63199141 | 63199220 | 63199141 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63198191 | 63198247 | 63198191 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63197998 | 63198090 | 63197998 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63197826 | 63197900 | 63197826 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | CDS | 63197126 | 63197230 | 63197126 | ID=Msa1206230-mRNA-1:cds;Parent=Msa1206230-mRNA-1 |
| chr8_1 | three_prime_UTR | 63196639 | 63197125 | 63196639 | ID=Msa1206230-mRNA-1:three_prime_utr;Parent=Msa1206230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
