AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1207510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1207510 MtrunA17_Chr4g0056441 98.182 770 13 1 1 770 1 769 0.0 1572
Msa1207510 MtrunA17_Chr3g0115081 54.419 792 303 12 6 759 1 772 0.0 841
Msa1207510 MtrunA17_Chr5g0424281 54.810 790 310 14 6 765 1 773 0.0 799
Msa1207510 MtrunA17_Chr3g0123351 54.698 713 306 9 58 758 95 802 0.0 778
Msa1207510 MtrunA17_Chr3g0131011 53.920 727 283 12 55 766 73 762 0.0 771
Msa1207510 MtrunA17_Chr4g0031691 32.626 377 229 12 393 754 71 437 2.53e-45 169
Msa1207510 MtrunA17_Chr7g0238731 33.245 376 228 11 391 752 73 439 8.51e-44 164
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1207510 AT4G22540.5 68.912 772 180 12 1 765 1 719 0.0 1078
Msa1207510 AT4G22540.1 68.912 772 180 12 1 765 1 719 0.0 1078
Msa1207510 AT4G12460.8 66.532 741 190 9 31 765 3 691 0.0 1011
Msa1207510 AT4G12460.1 66.532 741 190 9 31 765 3 691 0.0 1011
Msa1207510 AT4G12460.7 66.442 742 190 10 31 765 3 692 0.0 1008
Msa1207510 AT4G12460.5 65.331 649 167 9 31 673 3 599 0.0 858
Msa1207510 AT4G12460.6 65.231 650 167 10 31 673 3 600 0.0 853
Msa1207510 AT4G08180.1 58.815 709 280 6 55 759 106 806 0.0 843
Msa1207510 AT4G08180.4 58.815 709 280 6 55 759 106 806 0.0 843
Msa1207510 AT4G08180.2 58.815 709 279 7 55 759 106 805 0.0 838
Msa1207510 AT4G08180.3 58.533 709 281 7 55 759 106 805 0.0 833
Msa1207510 AT2G31020.1 52.651 811 297 14 6 763 1 777 0.0 810
Msa1207510 AT4G22540.2 70.513 546 121 5 221 765 2 508 0.0 809
Msa1207510 AT4G22540.3 70.513 546 121 5 221 765 2 508 0.0 809
Msa1207510 AT4G22540.6 70.513 546 121 5 221 765 2 508 0.0 809
Msa1207510 AT4G22540.4 70.513 546 121 5 221 765 2 508 0.0 809
Msa1207510 AT4G12460.3 68.440 545 129 4 221 765 2 503 0.0 788
Msa1207510 AT4G12460.4 68.440 545 129 4 221 765 2 503 0.0 788
Msa1207510 AT4G12460.9 68.440 545 129 4 221 765 2 503 0.0 788
Msa1207510 AT1G13170.1 54.420 724 308 9 50 761 90 803 0.0 788
Msa1207510 AT1G13170.2 52.886 745 308 10 50 761 90 824 0.0 774
Msa1207510 AT4G12460.2 78.706 371 71 2 395 765 1 363 0.0 640
Msa1207510 AT2G31030.1 68.613 411 123 1 350 760 85 489 0.0 610
Msa1207510 AT3G09300.1 34.232 371 217 13 393 747 75 434 1.29e-47 176
Msa1207510 AT5G02100.3 33.065 372 220 12 393 747 43 402 2.71e-46 171
Msa1207510 AT5G02100.1 33.065 372 220 12 393 747 70 429 3.61e-46 171
Msa1207510 AT5G59420.1 32.880 368 224 11 391 744 68 426 2.47e-43 163
Msa1207510 AT1G77730.1 35.242 227 136 4 48 272 47 264 5.97e-41 151
Msa1207510 AT5G02100.2 33.333 243 154 6 393 632 70 307 6.86e-32 127

Find 225 sgRNAs with CRISPR-Local

Find 673 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTGCCTTTGCTGTTTC+TGG 0.052254 8_1:-65010932 Msa1207510:CDS
AAGATGACTAAGAATAATTT+AGG 0.125609 8_1:+65016757 None:intergenic
AAAATCCATTCTTTGTTAAT+TGG 0.181482 8_1:+65013038 None:intergenic
TGAAATTCACCAAATATATC+TGG 0.207215 8_1:+65007275 None:intergenic
TTCCCCTAACAAGGGATTAA+AGG 0.210036 8_1:+65010877 None:intergenic
TTCGATATACTGGTGGATAT+TGG 0.234820 8_1:-65007331 Msa1207510:CDS
CTGACGGCGAAGAGCGTTTC+CGG 0.254872 8_1:+65016307 None:intergenic
AAGGTAGAGGATGGAGGTTT+TGG 0.259692 8_1:-65010067 Msa1207510:CDS
GTAACATTCATTCAAAGTTT+TGG 0.260982 8_1:-65010037 Msa1207510:CDS
AAGCCCTTTAATCCCTTGTT+AGG 0.261850 8_1:-65010881 Msa1207510:CDS
TTTGACGAAGTGTAATCTTT+AGG 0.279881 8_1:+65008634 None:intergenic
TAAATGACTTCAATTGTCTA+TGG 0.302536 8_1:-65006546 Msa1207510:three_prime_UTR
AGCATATGAGCATGGGAAAA+AGG 0.309220 8_1:-65011611 Msa1207510:intron
GGAATTTGAGAAGGCAAATA+TGG 0.309519 8_1:-65008295 Msa1207510:CDS
CTTTACAAATGGACTAATTA+CGG 0.310331 8_1:-65016488 Msa1207510:CDS
AGCTTCCACCCACGGATTCC+AGG 0.322458 8_1:-65008350 Msa1207510:CDS
ACAATGATGTATGATGATTA+TGG 0.323008 8_1:-65011829 Msa1207510:CDS
GGATCAGAAGCCACGGTTGC+CGG 0.323208 8_1:-65016515 Msa1207510:CDS
TTGTGATCATCATGGGAATA+TGG 0.330778 8_1:-65009802 Msa1207510:CDS
TCCGGCGTCTCTATCCATTC+TGG 0.334542 8_1:+65016325 None:intergenic
AGGAGAAGGGCGTTAGTCTT+TGG 0.335192 8_1:-65011759 Msa1207510:CDS
CTCCTACCTGGCGAGGATTT+CGG 0.339067 8_1:+65009718 None:intergenic
TCGATATACTGGTGGATATT+GGG 0.340088 8_1:-65007330 Msa1207510:CDS
CATTTCTGAAGGGATGATAT+TGG 0.340358 8_1:+65011670 None:intergenic
AGAAGTAGAAGTAGAACAAA+AGG 0.343199 8_1:+65017040 None:intergenic
TCAAGGAAAATGCAAGAAAA+TGG 0.353504 8_1:-65007398 Msa1207510:CDS
TCCCCTAACAAGGGATTAAA+GGG 0.357578 8_1:+65010878 None:intergenic
CTGGTTTGTTTGATACCATT+AGG 0.365540 8_1:-65014462 Msa1207510:CDS
TTTGGAGTACTCCTATCTTC+TGG 0.377023 8_1:-65011638 Msa1207510:CDS
GATAGATGATGACAGTTTAG+TGG 0.378128 8_1:+65014643 None:intergenic
TGATACCATTAGGCAATTAG+AGG 0.378401 8_1:-65014452 Msa1207510:intron
TTCAGGGAAACAGTCTCCTT+CGG 0.379577 8_1:-65010964 Msa1207510:intron
AATATAATTTGCCAAGGATA+AGG 0.381936 8_1:+65009823 None:intergenic
ATTGGCTCATTAAAGTATAC+TGG 0.382729 8_1:+65011688 None:intergenic
GATGGATGCCCAGATATATT+TGG 0.388595 8_1:-65007284 Msa1207510:CDS
TTCGAGGGCGAGGAGTTTAC+CGG 0.392882 8_1:-65016570 Msa1207510:CDS
TTCTCTAAGTGCCGTTGATC+AGG 0.393417 8_1:+65008321 None:intergenic
AGATGACTAAGAATAATTTA+GGG 0.393798 8_1:+65016758 None:intergenic
TCAGGGAAACAGTCTCCTTC+GGG 0.396439 8_1:-65010963 Msa1207510:intron
TCCTTCAGTTGTTCATCTAA+AGG 0.398048 8_1:-65016255 Msa1207510:intron
TTCATTTGAGAACTGATTCA+AGG 0.398225 8_1:-65014717 Msa1207510:CDS
AGATGGTTGAATAAATATAA+AGG 0.398745 8_1:+65016864 None:intergenic
ATGAAGGTAGGTAGTAATAA+AGG 0.400474 8_1:+65017066 None:intergenic
ACTTGAGCCTGCAGGAATAC+TGG 0.404656 8_1:+65009763 None:intergenic
AATGGAACGTTTCGATATAC+TGG 0.407910 8_1:-65007341 Msa1207510:CDS
ATTCTCCGGTGAACGGATCT+TGG 0.409105 8_1:+65016412 None:intergenic
TTTCGCAAAGAAGGTGAAAA+TGG 0.411519 8_1:-65007359 Msa1207510:CDS
ATGGAACATTGTTGTGGAAA+AGG 0.414030 8_1:-65008612 Msa1207510:CDS
TTGCCGGAGTTCTTTACAAA+TGG 0.416794 8_1:-65016499 Msa1207510:CDS
AAAGATTACACTTCGTCAAA+TGG 0.418594 8_1:-65008631 Msa1207510:CDS
CCTCATTATACCTTTAGTCC+TGG 0.419213 8_1:+65008520 None:intergenic
CTCTTTGAACTTGAGCCTGC+AGG 0.419501 8_1:+65009755 None:intergenic
AGTTGATACAGATATATGAT+AGG 0.421055 8_1:+65014612 None:intergenic
TTCTCCTTCTCAACAGGATC+CGG 0.423276 8_1:+65011775 None:intergenic
AAATTGTACCGAGTCAGATT+TGG 0.423649 8_1:+65008577 None:intergenic
GTAGAACAAAAGGGTAATGA+AGG 0.426425 8_1:+65017050 None:intergenic
CGCGAATCGTCTCGCCAGAA+TGG 0.431637 8_1:-65016339 Msa1207510:CDS
CCAATGAGATGCAGCACAAC+GGG 0.432925 8_1:+65016642 None:intergenic
TCTAGGGTCAGAACTCCAAC+TGG 0.434657 8_1:+65009993 None:intergenic
CTTTCTTCTAATTAGGTGAC+TGG 0.437943 8_1:-65008751 Msa1207510:intron
CTCATTATACCTTTAGTCCT+GGG 0.439634 8_1:+65008521 None:intergenic
TGTTAGTCAAGGCATTGATA+TGG 0.441535 8_1:-65011869 Msa1207510:CDS
ACGCCCTTCTCCTTCTCAAC+AGG 0.442450 8_1:+65011769 None:intergenic
TTATTCTTAGTCATCTTCAA+TGG 0.443669 8_1:-65016751 Msa1207510:five_prime_UTR
AATTACCTCTAATTGCCTAA+TGG 0.446236 8_1:+65014447 None:intergenic
GCAAATTAATTAGTTGGTGG+AGG 0.448314 8_1:-65006781 Msa1207510:three_prime_UTR
ATTTGGTATCTTTGAAAATG+AGG 0.449650 8_1:-65006691 Msa1207510:three_prime_UTR
ATCAACGGCACTTAGAGAAT+GGG 0.452974 8_1:-65008317 Msa1207510:CDS
CAATGATGTATGATGATTAT+GGG 0.458008 8_1:-65011828 Msa1207510:CDS
TTTCACCATCATCAAACTCT+AGG 0.460599 8_1:+65009976 None:intergenic
GGAAAATGCAAGAAAATGGC+TGG 0.461061 8_1:-65007394 Msa1207510:CDS
AGGAGGATAATTAATTAAGA+TGG 0.463544 8_1:+65016847 None:intergenic
AAGCAGATCCCTCGGGTTCA+AGG 0.463930 8_1:+65013077 None:intergenic
TCCTCTACCTTCACAATGGC+AGG 0.464356 8_1:+65010079 None:intergenic
GAAGTAGAAGTAGAACAAAA+GGG 0.465139 8_1:+65017041 None:intergenic
AAGCAAGAGCTGTAGGATCA+TGG 0.469213 8_1:-65007307 Msa1207510:CDS
ATATGCTCTATCCAGAAGAT+AGG 0.472527 8_1:+65011627 None:intergenic
CATTGATATGGAAAATAGTC+AGG 0.474331 8_1:-65011857 Msa1207510:CDS
TGTAGCGTGGATACAAGCTT+TGG 0.474954 8_1:-65014686 Msa1207510:CDS
AAGAAGCGAACTCCTTTGTC+AGG 0.476918 8_1:+65010836 None:intergenic
GTAGGTAGTAATAAAGGAAT+GGG 0.477295 8_1:+65017072 None:intergenic
AGCCCTTTAATCCCTTGTTA+GGG 0.477745 8_1:-65010880 Msa1207510:CDS
ACAATATATAACCTTATCCT+TGG 0.478634 8_1:-65009834 Msa1207510:CDS
GATCAACGGCACTTAGAGAA+TGG 0.479149 8_1:-65008318 Msa1207510:CDS
AAAGTACGCCATTGCGGAGG+AGG 0.479447 8_1:+65016441 None:intergenic
CATTGTTGTGGAAAAGGACT+AGG 0.483064 8_1:-65008606 Msa1207510:CDS
GGGTAGAATGGTAATTAGCT+TGG 0.484792 8_1:+65017092 None:intergenic
ATTCTTTGTCAAGAACGATC+TGG 0.485342 8_1:-65014481 Msa1207510:CDS
AAATTATATTGTGATCATCA+TGG 0.485557 8_1:-65009810 Msa1207510:CDS
ATGCATGCAAATTAATTAGT+TGG 0.488937 8_1:-65006787 Msa1207510:three_prime_UTR
GTCGTGCAAAGCAGATCCCT+CGG 0.495137 8_1:+65013069 None:intergenic
CCTAGGTGGTTTCGCAAAGA+AGG 0.495193 8_1:-65007368 Msa1207510:CDS
TGCATCTCATTGGAGAGTCC+AGG 0.495599 8_1:-65016632 Msa1207510:CDS
AGAGATATATAGCAGCCATT+TGG 0.497168 8_1:-65006708 Msa1207510:three_prime_UTR
GAGAACAGATTGAGATTCTC+CGG 0.501584 8_1:+65016398 None:intergenic
GGTGAATTACTTCCGATCCC+TGG 0.503690 8_1:+65016614 None:intergenic
GAATACCAATTAACAAAGAA+TGG 0.504184 8_1:-65013043 Msa1207510:CDS
CATACACGGCTGCACTTTCG+AGG 0.505626 8_1:-65016586 Msa1207510:CDS
CATTCTGGCGAGACGATTCG+CGG 0.507691 8_1:+65016340 None:intergenic
GGTAGGTAGTAATAAAGGAA+TGG 0.508880 8_1:+65017071 None:intergenic
GGATTTGTTGAAGATACAAT+GGG 0.510337 8_1:-65008730 Msa1207510:CDS
TGAGCTTACCCCAGGACTAA+AGG 0.510721 8_1:-65008530 Msa1207510:intron
AACTCCTTTGTCAGGAAAGT+CGG 0.512877 8_1:+65010844 None:intergenic
TAATAAAGGAATGGGTAGAA+TGG 0.514353 8_1:+65017080 None:intergenic
TTATCTTAAACCTTCTTGCA+TGG 0.518659 8_1:-65006756 Msa1207510:three_prime_UTR
TTCGTAAGTTTCCCCTAACA+AGG 0.521697 8_1:+65010868 None:intergenic
AAAGTTGTTGCCATGCAAGA+AGG 0.522129 8_1:+65006746 None:intergenic
CAAGTAGAGTAGATCGAAGA+AGG 0.522873 8_1:+65016827 None:intergenic
ATTGCGGAGGAGGAACCATC+GGG 0.525539 8_1:+65016451 None:intergenic
GAAGGAGAAGAAGATGAAGA+AGG 0.525636 8_1:+65016272 None:intergenic
AAGAAAATGGCTGGGAACCT+AGG 0.525750 8_1:-65007385 Msa1207510:CDS
TTGTACCGAGTCAGATTTGG+TGG 0.526468 8_1:+65008580 None:intergenic
TGACTTCAATTGTCTATGGC+TGG 0.526796 8_1:-65006542 Msa1207510:three_prime_UTR
AATCCTCAAAACATTTCTGA+AGG 0.528626 8_1:+65011659 None:intergenic
AGGTCTCAGCCTGGAATCCG+TGG 0.532533 8_1:+65008341 None:intergenic
CAAATTAATTAGTTGGTGGA+GGG 0.534469 8_1:-65006780 Msa1207510:three_prime_UTR
CATGCAAATTAATTAGTTGG+TGG 0.535523 8_1:-65006784 Msa1207510:three_prime_UTR
GAAATTCACCAAATATATCT+GGG 0.536305 8_1:+65007276 None:intergenic
TAAGAAACGTTTGCTTGAAG+AGG 0.539228 8_1:-65014581 Msa1207510:CDS
CATTGCGGAGGAGGAACCAT+CGG 0.540290 8_1:+65016450 None:intergenic
CCGTTGATCAGGTCTCAGCC+TGG 0.541115 8_1:+65008332 None:intergenic
AATTATATTGTGATCATCAT+GGG 0.542313 8_1:-65009809 Msa1207510:CDS
AGCAAGAGCTGTAGGATCAT+GGG 0.544115 8_1:-65007306 Msa1207510:CDS
TTATTCCAAGATCCGTTCAC+CGG 0.545707 8_1:-65016417 Msa1207510:CDS
TTAGGGCGTGGAAAATATAG+TGG 0.546554 8_1:-65013010 Msa1207510:intron
ACCTTTAGATGAACAACTGA+AGG 0.550447 8_1:+65016254 None:intergenic
CGTCAAATGGAACATTGTTG+TGG 0.552399 8_1:-65008618 Msa1207510:CDS
AGTCCATTTGTAAAGAACTC+CGG 0.552798 8_1:+65016496 None:intergenic
GGACTAATTACGGCAAAGGA+TGG 0.555562 8_1:-65016478 Msa1207510:CDS
AAGAAACGTTTGCTTGAAGA+GGG 0.556527 8_1:-65014580 Msa1207510:CDS
TCTTGACCGAAATCCTCGCC+AGG 0.557364 8_1:-65009724 Msa1207510:intron
GTTGATACAGATATATGATA+GGG 0.559476 8_1:+65014613 None:intergenic
CTGGATAGAGCATATGAGCA+TGG 0.561758 8_1:-65011619 Msa1207510:CDS
CAGCCACATTATTTGGCAAG+TGG 0.563225 8_1:-65008699 Msa1207510:CDS
TACCGAGTCAGATTTGGTGG+TGG 0.569125 8_1:+65008583 None:intergenic
TCGTGCAAAGCAGATCCCTC+GGG 0.569487 8_1:+65013070 None:intergenic
AAAGGAGAAGCTTCCACCCA+CGG 0.570119 8_1:-65008358 Msa1207510:intron
GACTGCATTGTTCGCCGTGG+AGG 0.570257 8_1:-65016536 Msa1207510:CDS
AACAAAAGGGTAATGAAGGT+AGG 0.570902 8_1:+65017054 None:intergenic
GTTGGAAAAGAGACAAAGAA+TGG 0.571522 8_1:-65008262 Msa1207510:intron
TTCACCATCATCAAACTCTA+GGG 0.571647 8_1:+65009977 None:intergenic
CGATGGTTCCTCCTCCGCAA+TGG 0.572855 8_1:-65016449 Msa1207510:CDS
TATTGGGAAGCAAGAGCTGT+AGG 0.573587 8_1:-65007314 Msa1207510:CDS
AGAGAATGGGGAATTTGAGA+AGG 0.574961 8_1:-65008304 Msa1207510:CDS
AGCCACATTATTTGGCAAGT+GGG 0.575209 8_1:-65008698 Msa1207510:CDS
CAATGGCAGGCAACCACAGT+TGG 0.575286 8_1:+65010092 None:intergenic
TCAATTCAACTTGACCCAGT+TGG 0.576089 8_1:-65010008 Msa1207510:CDS
GCCCTTTAATCCCTTGTTAG+GGG 0.581179 8_1:-65010879 Msa1207510:CDS
GCATCTCATTGGAGAGTCCA+GGG 0.581823 8_1:-65016631 Msa1207510:CDS
TGGATTTGTTGAAGATACAA+TGG 0.582114 8_1:-65008731 Msa1207510:CDS
ACACTGAATGAGCTTACCCC+AGG 0.584389 8_1:-65008538 Msa1207510:CDS
TGGATAGAGCATATGAGCAT+GGG 0.584720 8_1:-65011618 Msa1207510:CDS
GCCAGAATGGATAGAGACGC+CGG 0.586219 8_1:-65016326 Msa1207510:CDS
GCCATTGTGAAGGTAGAGGA+TGG 0.586276 8_1:-65010076 Msa1207510:CDS
CTGACCCTAGAGTTTGATGA+TGG 0.588643 8_1:-65009981 Msa1207510:CDS
GTAATCGCCAGTATTCCTGC+AGG 0.591049 8_1:-65009770 Msa1207510:CDS
GTCAATGATCAAAGACAATG+TGG 0.591275 8_1:-65011737 Msa1207510:CDS
AAATATGGAGAAACAAAGGT+TGG 0.591541 8_1:-65008280 Msa1207510:CDS
GGCAGGCAACCACAGTTGGA+TGG 0.595585 8_1:+65010096 None:intergenic
AAATGGACTAATTACGGCAA+AGG 0.595813 8_1:-65016482 Msa1207510:CDS
AAGGTTTATGACTCTTCTGA+CGG 0.598402 8_1:+65016291 None:intergenic
GCCTGCCATTGTGAAGGTAG+AGG 0.598638 8_1:-65010080 Msa1207510:CDS
CCTTCTTTGCGAAACCACCT+AGG 0.602307 8_1:+65007368 None:intergenic
GGAACGTTTCGATATACTGG+TGG 0.603452 8_1:-65007338 Msa1207510:CDS
GCTTCCGGATCCTGTTGAGA+AGG 0.604677 8_1:-65011779 Msa1207510:CDS
TCATTGGAGAGTCCAGGGAT+CGG 0.605015 8_1:-65016626 Msa1207510:CDS
AGTGCAGCCGTGTATGACTC+CGG 0.606485 8_1:+65016593 None:intergenic
GGTAAGCTCATTCAGTGTGA+TGG 0.607115 8_1:+65008543 None:intergenic
GATTGAGATTCTCCGGTGAA+CGG 0.609231 8_1:+65016405 None:intergenic
GGTATCCTCAAATAGTAAGA+CGG 0.610160 8_1:-65011807 Msa1207510:CDS
AGTGGGAGACAATAACATCA+TGG 0.610574 8_1:+65016993 None:intergenic
GAAAATGCAAGAAAATGGCT+GGG 0.611031 8_1:-65007393 Msa1207510:CDS
GATCACAATATAATTTGCCA+AGG 0.612712 8_1:+65009817 None:intergenic
TGAAATATTTCAGTGGAGCA+AGG 0.613705 8_1:-65009958 Msa1207510:intron
ATCCTCAAAACATTTCTGAA+GGG 0.613815 8_1:+65011660 None:intergenic
GCGAGGAGTTTACCGGCGAG+TGG 0.614782 8_1:-65016563 Msa1207510:CDS
GGATCCTGTTGAGAAGGAGA+AGG 0.614967 8_1:-65011773 Msa1207510:CDS
AGGGATCGGAAGTAATTCAC+CGG 0.615080 8_1:-65016612 Msa1207510:CDS
AAGCTTGTATCCACGCTACA+CGG 0.615200 8_1:+65014689 None:intergenic
GCTCATTAAAGTATACTGGA+AGG 0.617576 8_1:+65011692 None:intergenic
TCTGGATATGCATCATCAGA+AGG 0.618172 8_1:-65010914 Msa1207510:CDS
TCATTATACCTTTAGTCCTG+GGG 0.620951 8_1:+65008522 None:intergenic
GTAAAGAACTCCGGCAACCG+TGG 0.621812 8_1:+65016505 None:intergenic
GATCCTGTTGAGAAGGAGAA+GGG 0.622608 8_1:-65011772 Msa1207510:CDS
GGCAGCTAACCTTGAACCCG+AGG 0.623759 8_1:-65013086 Msa1207510:CDS
GGCCACCACCAAATCTGACT+CGG 0.623879 8_1:-65008585 Msa1207510:CDS
TCCAATGAGATGCAGCACAA+CGG 0.624692 8_1:+65016641 None:intergenic
GGTCTCAGCCTGGAATCCGT+GGG 0.626857 8_1:+65008342 None:intergenic
AGGCAAATATGGAGAAACAA+AGG 0.630247 8_1:-65008284 Msa1207510:CDS
CCGTGGAGGATCAGAAGCCA+CGG 0.633089 8_1:-65016522 Msa1207510:CDS
CTCAGCCTGGAATCCGTGGG+TGG 0.633274 8_1:+65008345 None:intergenic
TAGCAGTGAAAATCTTGTGA+AGG 0.636958 8_1:-65014557 Msa1207510:CDS
TCTGCGGAAGCTGTTAGTCA+AGG 0.641099 8_1:-65011880 Msa1207510:CDS
TCGTAAGTTTCCCCTAACAA+GGG 0.642972 8_1:+65010869 None:intergenic
AGGAATACTGGCGATTACCA+CGG 0.645278 8_1:+65009775 None:intergenic
ATGCAGTCAGATCCACTCGC+CGG 0.646020 8_1:+65016551 None:intergenic
GTGGTTGCCTGCCATTGTGA+AGG 0.649232 8_1:-65010086 Msa1207510:CDS
TAATTCACCGGAGTCATACA+CGG 0.650053 8_1:-65016600 Msa1207510:CDS
ATGATGGTGAAATATTTCAG+TGG 0.650358 8_1:-65009965 Msa1207510:CDS
CATGGGAATATGGAAATCCG+TGG 0.651698 8_1:-65009792 Msa1207510:CDS
GTAGAACCTCCTACCTGGCG+AGG 0.655780 8_1:+65009711 None:intergenic
CTAGGGTCAGAACTCCAACT+GGG 0.658230 8_1:+65009994 None:intergenic
AATAAGAAAGTACGCCATTG+CGG 0.660257 8_1:+65016435 None:intergenic
CCAGGCTGAGACCTGATCAA+CGG 0.663381 8_1:-65008332 Msa1207510:CDS
TGCATATCCAGAAACAGCAA+AGG 0.663498 8_1:+65010925 None:intergenic
GCAAAGGATGGAGATCCCGA+TGG 0.666798 8_1:-65016466 Msa1207510:CDS
TCAACGGCACTTAGAGAATG+GGG 0.669553 8_1:-65008316 Msa1207510:CDS
CAGCAACGTTCAATGCCCGA+AGG 0.671551 8_1:+65010948 None:intergenic
AAAATGGCTGGGAACCTAGG+TGG 0.671755 8_1:-65007382 Msa1207510:CDS
AAGAAAGTACGCCATTGCGG+AGG 0.672163 8_1:+65016438 None:intergenic
GTAGAGTAGATCGAAGAAGG+AGG 0.674453 8_1:+65016830 None:intergenic
ATCCCACTTGCCAAATAATG+TGG 0.674658 8_1:+65008696 None:intergenic
ATACACGGCTGCACTTTCGA+GGG 0.677693 8_1:-65016585 Msa1207510:CDS
CCGTGGCTTCTGATCCTCCA+CGG 0.679159 8_1:+65016522 None:intergenic
ATATATCTGTATCAACTGAG+AGG 0.679661 8_1:-65014606 Msa1207510:CDS
ATTGTGAAGGTAGAGGATGG+AGG 0.682063 8_1:-65010073 Msa1207510:CDS
AGAGCTGTAGGATCATGGGA+TGG 0.683308 8_1:-65007302 Msa1207510:CDS
TCTGACTGCATTGTTCGCCG+TGG 0.685403 8_1:-65016539 Msa1207510:CDS
GCAGCTAACCTTGAACCCGA+GGG 0.688367 8_1:-65013085 Msa1207510:CDS
TCCATCCTCTACCTTCACAA+TGG 0.688384 8_1:+65010075 None:intergenic
GCTATCAGAATGCAGTACAA+CGG 0.696464 8_1:-65012043 Msa1207510:intron
TCAATGATCAAAGACAATGT+GGG 0.707465 8_1:-65011736 Msa1207510:CDS
GAAGCCGACTTTCCTGACAA+AGG 0.708212 8_1:-65010848 Msa1207510:CDS
GGTTAGTCACCATCCAACTG+TGG 0.711984 8_1:-65010105 Msa1207510:CDS
AAATCGAGTGAACATGTCTG+CGG 0.724062 8_1:-65011896 Msa1207510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAATGAATAAATAAAAAA+GGG + chr8_1:65006769-65006788 None:intergenic 10.0%
!! ATTGAATGAATAAATAAAAA+AGG + chr8_1:65006770-65006789 None:intergenic 10.0%
!!! ATAATATTTTTTAATATGTG+TGG - chr8_1:65007730-65007749 Msa1207510:intron 10.0%
!!! TTTCTTTAAAATAATTCAAA+TGG - chr8_1:65008498-65008517 Msa1207510:intron 10.0%
!!! TTCTTTAAAATAATTCAAAT+GGG - chr8_1:65008499-65008518 Msa1207510:intron 10.0%
!! TGTAAAAATATAAATATTAC+TGG + chr8_1:65008581-65008600 None:intergenic 10.0%
!!! ATTAGTTTAAAATACATTTT+GGG + chr8_1:65009691-65009710 None:intergenic 10.0%
!!! TATTAGTTTAAAATACATTT+TGG + chr8_1:65009692-65009711 None:intergenic 10.0%
!!! TTTTAACTATTTAATTAGTT+TGG - chr8_1:65010987-65011006 Msa1207510:intron 10.0%
!! TAAACATAATAGTATTAATT+TGG - chr8_1:65011339-65011358 Msa1207510:intron 10.0%
!! TAAAATAAAATAACTAATGA+TGG - chr8_1:65011371-65011390 Msa1207510:intron 10.0%
!! TTGTAATTGTAATAAATATA+TGG + chr8_1:65014055-65014074 None:intergenic 10.0%
!! TAAAATAAAATATATAGTGT+TGG + chr8_1:65014569-65014588 None:intergenic 10.0%
!!! TATATTTTATTTTAAGACTT+TGG - chr8_1:65014575-65014594 Msa1207510:CDS 10.0%
!!! TAGTATTTTTTATTTTTTTG+AGG - chr8_1:65016774-65016793 Msa1207510:five_prime_UTR 10.0%
!!! AGTATTTTTTATTTTTTTGA+GGG - chr8_1:65016775-65016794 Msa1207510:five_prime_UTR 10.0%
!!! AATTAAGTATAGTTTTTTCA+AGG + chr8_1:65006561-65006580 None:intergenic 15.0%
!! TTTGATTATGATTATGATAA+TGG - chr8_1:65007525-65007544 Msa1207510:intron 15.0%
!! AAAAAATGGTATAAAAACTT+TGG - chr8_1:65007874-65007893 Msa1207510:intron 15.0%
!! TGTATATAAAAATATTCACT+TGG + chr8_1:65009445-65009464 None:intergenic 15.0%
!!! TTTAATAATATCTTTTCATG+AGG - chr8_1:65009467-65009486 Msa1207510:intron 15.0%
!!! TATTTTCCTTGTAATAATTT+CGG + chr8_1:65009550-65009569 None:intergenic 15.0%
!!! TTAGTTTAAAATACATTTTG+GGG + chr8_1:65009690-65009709 None:intergenic 15.0%
!! ATAGTAGATATAAATTATAG+TGG + chr8_1:65010717-65010736 None:intergenic 15.0%
!!! ATAATTAAAGTGACATATTT+TGG - chr8_1:65011417-65011436 Msa1207510:intron 15.0%
!!! TAATTAAAGTGACATATTTT+GGG - chr8_1:65011418-65011437 Msa1207510:intron 15.0%
!! ACTAAATAATAAATACTGAA+AGG + chr8_1:65011587-65011606 None:intergenic 15.0%
!!! CAAAAATTTTCAAGATAATT+AGG + chr8_1:65012238-65012257 None:intergenic 15.0%
!! AATTTCCAAATAAATTATTG+AGG + chr8_1:65012460-65012479 None:intergenic 15.0%
!!! ATTATTATCTAGTTTTGATT+TGG - chr8_1:65012948-65012967 Msa1207510:intron 15.0%
!! AAATTAACCTTATGTTAAAT+AGG + chr8_1:65013386-65013405 None:intergenic 15.0%
!! AAAATCCTGTTAAAATTAAA+AGG - chr8_1:65013414-65013433 Msa1207510:intron 15.0%
!! TATAAAATTATGAATTGTCA+TGG - chr8_1:65015796-65015815 Msa1207510:intron 15.0%
!! ATTCTACATCTTTAATAAAA+AGG + chr8_1:65016153-65016172 None:intergenic 15.0%
!! CTTTATATATAAACTAATTG+TGG + chr8_1:65016206-65016225 None:intergenic 15.0%
!!! TTTCTCTTTTCTTTTAATAA+TGG - chr8_1:65016629-65016648 Msa1207510:CDS 15.0%
!!! TTCTCTTTTCTTTTAATAAT+GGG - chr8_1:65016630-65016649 Msa1207510:CDS 15.0%
!!! AACAACTTTTTTTTATTGAA+TGG - chr8_1:65016941-65016960 Msa1207510:five_prime_UTR 15.0%
!!! TTGTGAATGAAATTTTGTTT+GGG + chr8_1:65006708-65006727 None:intergenic 20.0%
!! TTTATGGTATAAAAAAGAGA+AGG + chr8_1:65006736-65006755 None:intergenic 20.0%
!!! AAAGGGTTTTTATTTGTTTA+TGG + chr8_1:65006752-65006771 None:intergenic 20.0%
!! AGATGGTTGAATAAATATAA+AGG + chr8_1:65006812-65006831 None:intergenic 20.0%
!! AGATGACTAAGAATAATTTA+GGG + chr8_1:65006918-65006937 None:intergenic 20.0%
!! AAGATGACTAAGAATAATTT+AGG + chr8_1:65006919-65006938 None:intergenic 20.0%
!!! AAAATTTGTTTCTCTTATAC+AGG + chr8_1:65007693-65007712 None:intergenic 20.0%
!!! AAGATTTTTAAGGCTTAAAA+TGG + chr8_1:65008225-65008244 None:intergenic 20.0%
!! GAGTATATGTAAATTTCTTT+AGG - chr8_1:65008261-65008280 Msa1207510:intron 20.0%
!! AGAAAAAAATTATATTGACC+TGG + chr8_1:65008483-65008502 None:intergenic 20.0%
!! TATAAATCTAAACTAGTAAC+TGG + chr8_1:65008766-65008785 None:intergenic 20.0%
!! ATAAATGATGAACAGTAAAA+TGG - chr8_1:65009417-65009436 Msa1207510:intron 20.0%
!! TAAATGATGAACAGTAAAAT+GGG - chr8_1:65009418-65009437 Msa1207510:intron 20.0%
!!! CTTTAATTTTAATTGCAACA+TGG + chr8_1:65010181-65010200 None:intergenic 20.0%
!! TTGTTTGATAAAACATGAAT+TGG - chr8_1:65010209-65010228 Msa1207510:intron 20.0%
!! TGTTTGATAAAACATGAATT+GGG - chr8_1:65010210-65010229 Msa1207510:intron 20.0%
!!! GCAAGAAGAATAAATATTTT+AGG + chr8_1:65010430-65010449 None:intergenic 20.0%
!! GTTTAGTAAGTCATATATAA+AGG + chr8_1:65010541-65010560 None:intergenic 20.0%
!! AAAATCCATTCTTTGTTAAT+TGG + chr8_1:65010638-65010657 None:intergenic 20.0%
!! TGATTGGAATAAAAATTACT+TGG - chr8_1:65011310-65011329 Msa1207510:intron 20.0%
!!! ACATAATAGTATTAATTTGG+AGG - chr8_1:65011342-65011361 Msa1207510:intron 20.0%
!! GTTAATATGACACTTAATAT+TGG - chr8_1:65011454-65011473 Msa1207510:intron 20.0%
!!! TAAAAAACATTGTAAGTTGA+AGG + chr8_1:65012185-65012204 None:intergenic 20.0%
!!! CATTTGTTTTCTATTTGTTT+TGG - chr8_1:65012352-65012371 Msa1207510:intron 20.0%
!! CTATTTAAAAACCTATTAAC+TGG + chr8_1:65012431-65012450 None:intergenic 20.0%
!! CTATACCTCAATAATTTATT+TGG - chr8_1:65012452-65012471 Msa1207510:intron 20.0%
!!! GTCATCTTTTATTTGAATTA+AGG + chr8_1:65012642-65012661 None:intergenic 20.0%
!! AATCTCTTCATAAAATCATA+AGG + chr8_1:65012880-65012899 None:intergenic 20.0%
!!! TATGATTTTATGAAGAGATT+TGG - chr8_1:65012880-65012899 Msa1207510:intron 20.0%
!! ATAACTATGATTAAATCTTG+AGG - chr8_1:65012971-65012990 Msa1207510:intron 20.0%
!! TAACTATGATTAAATCTTGA+GGG - chr8_1:65012972-65012991 Msa1207510:intron 20.0%
!!! ACATATTTTTCTTTTCACTA+AGG - chr8_1:65013117-65013136 Msa1207510:intron 20.0%
!! ATATATGTGATAAAATCTTG+AGG - chr8_1:65013224-65013243 Msa1207510:intron 20.0%
!! TATATGTGATAAAATCTTGA+GGG - chr8_1:65013225-65013244 Msa1207510:intron 20.0%
!!! TAACATTCATTCAAAGTTTT+GGG - chr8_1:65013637-65013656 Msa1207510:intron 20.0%
!! AAATTATATTGTGATCATCA+TGG - chr8_1:65013863-65013882 Msa1207510:intron 20.0%
!! AATTATATTGTGATCATCAT+GGG - chr8_1:65013864-65013883 Msa1207510:intron 20.0%
!!! TTTCCAATCCATATTTTTTT+GGG - chr8_1:65014021-65014040 Msa1207510:intron 20.0%
!! ATATAGTACCCAAAAAAATA+TGG + chr8_1:65014032-65014051 None:intergenic 20.0%
!!! AAATTTCTGAGTAATTTTAC+CGG - chr8_1:65014460-65014479 Msa1207510:CDS 20.0%
!!! ATTAGAAATTCTAAAAAGTG+AGG + chr8_1:65014528-65014547 None:intergenic 20.0%
!!! TTTTATTTTAAGACTTTGGA+AGG - chr8_1:65014579-65014598 Msa1207510:CDS 20.0%
!! TTCTTCAAAATCGATAATAT+GGG + chr8_1:65014624-65014643 None:intergenic 20.0%
!! TTTCTTCAAAATCGATAATA+TGG + chr8_1:65014625-65014644 None:intergenic 20.0%
!!! AGCTGAATCATATTTTATAA+CGG + chr8_1:65015252-65015271 None:intergenic 20.0%
!! TACATTTGATCACAAATTAA+AGG - chr8_1:65015297-65015316 Msa1207510:intron 20.0%
!!! TTTGAAGTAGTTATTTGATT+AGG - chr8_1:65015495-65015514 Msa1207510:intron 20.0%
!! AATAAAAATAAAGTTCAACG+TGG + chr8_1:65015677-65015696 None:intergenic 20.0%
!!! TTTAAGACTTGAAAGAATTA+AGG + chr8_1:65016571-65016590 None:intergenic 20.0%
!! AGAAAAACCTTATCAATAAT+AGG - chr8_1:65016680-65016699 Msa1207510:exon 20.0%
!! TATTAGTCCTATTATTGATA+AGG + chr8_1:65016690-65016709 None:intergenic 20.0%
!! TCAATAATAGGACTAATAAT+AGG - chr8_1:65016692-65016711 Msa1207510:five_prime_UTR 20.0%
!! AATATCAATATGTTGCAAAA+CGG + chr8_1:65016747-65016766 None:intergenic 20.0%
!! CTTGTGAATGAAATTTTGTT+TGG + chr8_1:65006709-65006728 None:intergenic 25.0%
! AGGAGGATAATTAATTAAGA+TGG + chr8_1:65006829-65006848 None:intergenic 25.0%
! TTATTCTTAGTCATCTTCAA+TGG - chr8_1:65006922-65006941 Msa1207510:intron 25.0%
!! TTTTTCTAACTAGTTCGTAA+TGG + chr8_1:65006951-65006970 None:intergenic 25.0%
!!! CTTTACAAATGGACTAATTA+CGG - chr8_1:65007185-65007204 Msa1207510:intron 25.0%
!!! GAAAAGATTTCATTGATTTC+CGG - chr8_1:65007779-65007798 Msa1207510:intron 25.0%
!!! CATGGTTTGATTATTTTTCA+TGG + chr8_1:65007805-65007824 None:intergenic 25.0%
! AAATCCAACGGTTTATAATT+TGG - chr8_1:65007916-65007935 Msa1207510:intron 25.0%
! AATCCAACGGTTTATAATTT+GGG - chr8_1:65007917-65007936 Msa1207510:intron 25.0%
!!! TGAAATGTTACAGTTTTAAC+TGG - chr8_1:65007973-65007992 Msa1207510:intron 25.0%
! ATTGGCATTACTTCTTAAAT+TGG - chr8_1:65008127-65008146 Msa1207510:intron 25.0%
!! TGTAAGGTTGAAGATTTTTA+AGG + chr8_1:65008235-65008254 None:intergenic 25.0%
! AATCTTCAACCTTACAAATT+TGG - chr8_1:65008239-65008258 Msa1207510:intron 25.0%
! ACATATACTCCAAATTTGTA+AGG + chr8_1:65008251-65008270 None:intergenic 25.0%
! TCAACAGAAATATATATACG+TGG - chr8_1:65008426-65008445 Msa1207510:intron 25.0%
! CAACAGAAATATATATACGT+GGG - chr8_1:65008427-65008446 Msa1207510:intron 25.0%
! ATGAAATTTACCTTATCAAC+CGG + chr8_1:65008674-65008693 None:intergenic 25.0%
! GTTGATACAGATATATGATA+GGG + chr8_1:65009063-65009082 None:intergenic 25.0%
!! AGTTGATACAGATATATGAT+AGG + chr8_1:65009064-65009083 None:intergenic 25.0%
!!! CCATTTCAAATTTTGAAGAA+CGG - chr8_1:65009380-65009399 Msa1207510:intron 25.0%
! AAAATATCCCAAACATTTCT+TGG - chr8_1:65009564-65009583 Msa1207510:intron 25.0%
! AAATATCCCAAACATTTCTT+GGG - chr8_1:65009565-65009584 Msa1207510:intron 25.0%
!!! ACTGTTGTGGTTTTTATTTA+TGG - chr8_1:65009871-65009890 Msa1207510:intron 25.0%
! TGATGAAGTTATAGTATGTT+TGG + chr8_1:65010138-65010157 None:intergenic 25.0%
! ATGATTTAGACCATTTCTTT+GGG + chr8_1:65010373-65010392 None:intergenic 25.0%
! GAATACCAATTAACAAAGAA+TGG - chr8_1:65010630-65010649 Msa1207510:intron 25.0%
! CAAGCATAAGAAACATATAA+AGG + chr8_1:65010694-65010713 None:intergenic 25.0%
!!! TTGTCTTGATAGTGATTATA+GGG - chr8_1:65010799-65010818 Msa1207510:intron 25.0%
! TTCATATAAGACAGAACAAT+AGG + chr8_1:65010826-65010845 None:intergenic 25.0%
! AATAATTCAAAACGACTTTG+GGG + chr8_1:65010878-65010897 None:intergenic 25.0%
! CAATAATTCAAAACGACTTT+GGG + chr8_1:65010879-65010898 None:intergenic 25.0%
! TCAATAATTCAAAACGACTT+TGG + chr8_1:65010880-65010899 None:intergenic 25.0%
! TATTTCAGAAATCCAATTGA+TGG - chr8_1:65011133-65011152 Msa1207510:intron 25.0%
! ATTTCAGAAATCCAATTGAT+GGG - chr8_1:65011134-65011153 Msa1207510:intron 25.0%
!!! ATTTTGGTTCTGACATTAAT+TGG + chr8_1:65011205-65011224 None:intergenic 25.0%
!! CAGAACCAAAATTTTGTTAA+TGG - chr8_1:65011213-65011232 Msa1207510:intron 25.0%
!! AGTTGCCATTAACAAAATTT+TGG + chr8_1:65011221-65011240 None:intergenic 25.0%
! CTAAAGTGACATTTGATATA+GGG + chr8_1:65011272-65011291 None:intergenic 25.0%
!! TCTAAAGTGACATTTGATAT+AGG + chr8_1:65011273-65011292 None:intergenic 25.0%
! GAATAAAAATTACTTGGAAG+TGG - chr8_1:65011316-65011335 Msa1207510:intron 25.0%
!! ATGGTACATCGAAATATTTT+GGG - chr8_1:65011390-65011409 Msa1207510:intron 25.0%
! CTAAAAGATACATACATAAG+AGG + chr8_1:65011561-65011580 None:intergenic 25.0%
! ACAATGATGTATGATGATTA+TGG - chr8_1:65011844-65011863 Msa1207510:CDS 25.0%
! CAATGATGTATGATGATTAT+GGG - chr8_1:65011845-65011864 Msa1207510:CDS 25.0%
! TTGGAAGTCAATGAATAATA+TGG + chr8_1:65012107-65012126 None:intergenic 25.0%
!!! ATGTTTTTTAGCCATTTGAT+TGG - chr8_1:65012195-65012214 Msa1207510:intron 25.0%
! TACCAATATTTCCAATCAAA+TGG + chr8_1:65012209-65012228 None:intergenic 25.0%
! TATTTGAACGTTAGATCTAA+CGG - chr8_1:65012302-65012321 Msa1207510:intron 25.0%
!! AGTTTGTTTGTACTAATCAT+TGG - chr8_1:65012588-65012607 Msa1207510:intron 25.0%
! AAAGTGGTTCATTATATAAC+TGG - chr8_1:65013044-65013063 Msa1207510:CDS 25.0%
!! TTTTTCTTTTCACTAAGGAT+TGG - chr8_1:65013122-65013141 Msa1207510:intron 25.0%
! AAGATAACAATCTACTTAGT+AGG + chr8_1:65013193-65013212 None:intergenic 25.0%
! ACAATGACCTATTTAACATA+AGG - chr8_1:65013376-65013395 Msa1207510:intron 25.0%
!!! TCTGACCTTTTAATTTTAAC+AGG + chr8_1:65013422-65013441 None:intergenic 25.0%
! TCTTATAAAACCAAATGTGT+TGG + chr8_1:65013479-65013498 None:intergenic 25.0%
!! GTAACATTCATTCAAAGTTT+TGG - chr8_1:65013636-65013655 Msa1207510:intron 25.0%
!! AACATTCATTCAAAGTTTTG+GGG - chr8_1:65013638-65013657 Msa1207510:intron 25.0%
!!! ATTGTTGTTGTTTCTCTTAT+AGG - chr8_1:65013808-65013827 Msa1207510:intron 25.0%
! ACAATATATAACCTTATCCT+TGG - chr8_1:65013839-65013858 Msa1207510:intron 25.0%
!! AATATAATTTGCCAAGGATA+AGG + chr8_1:65013853-65013872 None:intergenic 25.0%
!!! GTTTCCAATCCATATTTTTT+TGG - chr8_1:65014020-65014039 Msa1207510:intron 25.0%
!! ATTTTAAGCGAGACATTTAA+TGG - chr8_1:65014301-65014320 Msa1207510:intron 25.0%
! TAACATGAAAAGTAATGTGA+TGG + chr8_1:65014414-65014433 None:intergenic 25.0%
!! GTGTATTTATTTCTCAAGAA+AGG - chr8_1:65014778-65014797 Msa1207510:CDS 25.0%
!!! TTCTAGCATTTAGCTTATTT+TGG - chr8_1:65014833-65014852 Msa1207510:intron 25.0%
!!! GACAGCATTTATTATTTTGA+TGG - chr8_1:65015000-65015019 Msa1207510:intron 25.0%
!! CATATTTTATAACGGTTGAA+AGG + chr8_1:65015244-65015263 None:intergenic 25.0%
! GTTATAAAATATGATTCAGC+TGG - chr8_1:65015251-65015270 Msa1207510:intron 25.0%
!! TGTAACTTTTATCAAAGTCA+TGG + chr8_1:65015587-65015606 None:intergenic 25.0%
! ACTAATTGAAAATCTTGGAA+GGG + chr8_1:65015935-65015954 None:intergenic 25.0%
! TACTAATTGAAAATCTTGGA+AGG + chr8_1:65015936-65015955 None:intergenic 25.0%
! ACGTTACTAATTGAAAATCT+TGG + chr8_1:65015940-65015959 None:intergenic 25.0%
! AAATGTTCGATACTAACTAT+AGG + chr8_1:65016035-65016054 None:intergenic 25.0%
! ACAGATGAGTAAAAATATAC+AGG + chr8_1:65016067-65016086 None:intergenic 25.0%
! CAGTTCAAAAATTGTATGAT+GGG + chr8_1:65016103-65016122 None:intergenic 25.0%
! TAAAAAGGTCAAATCTACAT+TGG + chr8_1:65016138-65016157 None:intergenic 25.0%
! CCAAATTAATACTTGGTTAA+AGG + chr8_1:65016234-65016253 None:intergenic 25.0%
! CCTTTAACCAAGTATTAATT+TGG - chr8_1:65016231-65016250 Msa1207510:intron 25.0%
!! TAACCAAGTATTAATTTGGA+TGG - chr8_1:65016235-65016254 Msa1207510:intron 25.0%
! AAACCATCCAAATTAATACT+TGG + chr8_1:65016241-65016260 None:intergenic 25.0%
! GAAATTCACCAAATATATCT+GGG + chr8_1:65016400-65016419 None:intergenic 25.0%
! TGAAATTCACCAAATATATC+TGG + chr8_1:65016401-65016420 None:intergenic 25.0%
! AAAAATCAAGATGCATCAAA+AGG + chr8_1:65016440-65016459 None:intergenic 25.0%
! TCTTAAATAAAGAACCACAA+TGG - chr8_1:65016584-65016603 Msa1207510:CDS 25.0%
! ATAATAGGAGTTTCTTTCAA+TGG - chr8_1:65016707-65016726 Msa1207510:five_prime_UTR 25.0%
!!! ATTTTTTTGAGGGATAACAA+TGG - chr8_1:65016785-65016804 Msa1207510:five_prime_UTR 25.0%
! TTTATTAATTCTGTTGCAGA+TGG - chr8_1:65016853-65016872 Msa1207510:five_prime_UTR 25.0%
! ATGCATGCAAATTAATTAGT+TGG - chr8_1:65016886-65016905 Msa1207510:five_prime_UTR 25.0%
!! TCATTTTCAAAGATACCAAA+TGG + chr8_1:65016983-65017002 None:intergenic 25.0%
!! ATTTGGTATCTTTGAAAATG+AGG - chr8_1:65016982-65017001 Msa1207510:five_prime_UTR 25.0%
!!! GAATTGCTTGAAGTTATTTT+TGG + chr8_1:65017082-65017101 None:intergenic 25.0%
! TAAATGACTTCAATTGTCTA+TGG - chr8_1:65017127-65017146 Msa1207510:five_prime_UTR 25.0%
TAATAAAGGAATGGGTAGAA+TGG + chr8_1:65006596-65006615 None:intergenic 30.0%
GTAGGTAGTAATAAAGGAAT+GGG + chr8_1:65006604-65006623 None:intergenic 30.0%
ATGAAGGTAGGTAGTAATAA+AGG + chr8_1:65006610-65006629 None:intergenic 30.0%
GAAGTAGAAGTAGAACAAAA+GGG + chr8_1:65006635-65006654 None:intergenic 30.0%
AGAAGTAGAAGTAGAACAAA+AGG + chr8_1:65006636-65006655 None:intergenic 30.0%
TACAGGTAATAATAGCATTG+AGG + chr8_1:65007676-65007695 None:intergenic 30.0%
!! GTTTGATTATTTTTCATGGC+CGG + chr8_1:65007801-65007820 None:intergenic 30.0%
!! GGGTGAATTTGATTTGAAAA+TGG - chr8_1:65007937-65007956 Msa1207510:intron 30.0%
AGATGATGAAAAAGTAAGAG+GGG + chr8_1:65008167-65008186 None:intergenic 30.0%
GAGATGATGAAAAAGTAAGA+GGG + chr8_1:65008168-65008187 None:intergenic 30.0%
TGAGATGATGAAAAAGTAAG+AGG + chr8_1:65008169-65008188 None:intergenic 30.0%
! AGATAGAAAAGTGAAAGCAT+AGG - chr8_1:65008355-65008374 Msa1207510:CDS 30.0%
ATATGGAATTGGAAATGGAA+AGG - chr8_1:65008381-65008400 Msa1207510:intron 30.0%
TATGGAATTGGAAATGGAAA+GGG - chr8_1:65008382-65008401 Msa1207510:intron 30.0%
GTGCTCTTATATACTGTTTA+AGG - chr8_1:65008521-65008540 Msa1207510:intron 30.0%
GAATGATTCTAGTCAAACAA+TGG - chr8_1:65008629-65008648 Msa1207510:CDS 30.0%
TAGAGTCATTTCATGATATC+CGG - chr8_1:65008652-65008671 Msa1207510:CDS 30.0%
AGATCTGTAAAACAAAAGCA+AGG + chr8_1:65008873-65008892 None:intergenic 30.0%
! TTCATTTGAGAACTGATTCA+AGG - chr8_1:65008956-65008975 Msa1207510:intron 30.0%
ATATATCTGTATCAACTGAG+AGG - chr8_1:65009067-65009086 Msa1207510:intron 30.0%
AATTACCTCTAATTGCCTAA+TGG + chr8_1:65009229-65009248 None:intergenic 30.0%
CCGTTCTTCAAAATTTGAAA+TGG + chr8_1:65009383-65009402 None:intergenic 30.0%
! TTTTCATGAGGTAGAGAATT+TGG - chr8_1:65009479-65009498 Msa1207510:intron 30.0%
TTTCATGAGGTAGAGAATTT+GGG - chr8_1:65009480-65009499 Msa1207510:intron 30.0%
CATTCACCGAAATTATTACA+AGG - chr8_1:65009541-65009560 Msa1207510:intron 30.0%
TTGAGCTTTCATTGAAGTAA+TGG - chr8_1:65009640-65009659 Msa1207510:intron 30.0%
! TGTAATGAGCTTTCTAGTAA+TGG - chr8_1:65009745-65009764 Msa1207510:CDS 30.0%
! TTGGCATTTTATAGAAGTGA+TGG + chr8_1:65009773-65009792 None:intergenic 30.0%
ATGATTCTAAACTTCTGAAC+AGG - chr8_1:65010110-65010129 Msa1207510:intron 30.0%
ACAAATAAAATCACCATCAG+AGG + chr8_1:65010331-65010350 None:intergenic 30.0%
CATGATTTAGACCATTTCTT+TGG + chr8_1:65010374-65010393 None:intergenic 30.0%
!! TAAATATTTTAGGTGACGCT+AGG + chr8_1:65010420-65010439 None:intergenic 30.0%
!! AAGAATGGATTTTCCAGTTT+AGG - chr8_1:65010645-65010664 Msa1207510:intron 30.0%
!! AGAATGGATTTTCCAGTTTA+GGG - chr8_1:65010646-65010665 Msa1207510:intron 30.0%
GCATAAGAAACATATAAAGG+TGG + chr8_1:65010691-65010710 None:intergenic 30.0%
AAAAGAGAACGTAAACATCA+CGG + chr8_1:65010743-65010762 None:intergenic 30.0%
!! GTTGTCTTGATAGTGATTAT+AGG - chr8_1:65010798-65010817 Msa1207510:intron 30.0%
!! TGTCTTGATAGTGATTATAG+GGG - chr8_1:65010800-65010819 Msa1207510:intron 30.0%
TGTTCTGTCTTATATGAACA+TGG - chr8_1:65010828-65010847 Msa1207510:CDS 30.0%
GTTAACATAGAATAACAACC+AGG + chr8_1:65011088-65011107 None:intergenic 30.0%
TTTGATATAGGGATATAGGA+CGG + chr8_1:65011261-65011280 None:intergenic 30.0%
GACATTTGATATAGGGATAT+AGG + chr8_1:65011265-65011284 None:intergenic 30.0%
TCATTGTCATGAATACTGAT+TGG - chr8_1:65011294-65011313 Msa1207510:intron 30.0%
! GATGGTACATCGAAATATTT+TGG - chr8_1:65011389-65011408 Msa1207510:intron 30.0%
TGACACTTAATATTGGAATG+AGG - chr8_1:65011461-65011480 Msa1207510:intron 30.0%
GACACTTAATATTGGAATGA+GGG - chr8_1:65011462-65011481 Msa1207510:intron 30.0%
!! CTCATGTTTTTCAACATCAT+CGG + chr8_1:65011662-65011681 None:intergenic 30.0%
!!! ATTTTTCAGACTCTGGTTTT+AGG - chr8_1:65011734-65011753 Msa1207510:CDS 30.0%
CATTGATATGGAAAATAGTC+AGG - chr8_1:65011816-65011835 Msa1207510:CDS 30.0%
! TTTTTCCGTCTTACTATTTG+AGG + chr8_1:65011874-65011893 None:intergenic 30.0%
TCAATGATCAAAGACAATGT+GGG - chr8_1:65011937-65011956 Msa1207510:CDS 30.0%
! ATTGGCTCATTAAAGTATAC+TGG + chr8_1:65011988-65012007 None:intergenic 30.0%
ATCCTCAAAACATTTCTGAA+GGG + chr8_1:65012016-65012035 None:intergenic 30.0%
AATCCTCAAAACATTTCTGA+AGG + chr8_1:65012017-65012036 None:intergenic 30.0%
!!! TCAGAAATGTTTTGAGGATT+TGG - chr8_1:65012017-65012036 Msa1207510:CDS 30.0%
!!! GAAATTTGTTTTGCTTGCAT+TGG + chr8_1:65012126-65012145 None:intergenic 30.0%
AGCCATTTGATTGGAAATAT+TGG - chr8_1:65012204-65012223 Msa1207510:intron 30.0%
TAACGGAAGAATGATAACTA+TGG - chr8_1:65012319-65012338 Msa1207510:intron 30.0%
!!! TGTTTTCTATTTGTTTTGGC+TGG - chr8_1:65012356-65012375 Msa1207510:intron 30.0%
CAAACTGAATTCCAGTTAAT+AGG - chr8_1:65012417-65012436 Msa1207510:intron 30.0%
TGAACTAAGTCCATTATAGT+GGG + chr8_1:65012535-65012554 None:intergenic 30.0%
ATGAACTAAGTCCATTATAG+TGG + chr8_1:65012536-65012555 None:intergenic 30.0%
! AACCCTTGAATTGTATTTTC+AGG - chr8_1:65012692-65012711 Msa1207510:intron 30.0%
! ACCCTTGAATTGTATTTTCA+GGG - chr8_1:65012693-65012712 Msa1207510:intron 30.0%
TCCCTGAAAATACAATTCAA+GGG + chr8_1:65012697-65012716 None:intergenic 30.0%
TTCCCTGAAAATACAATTCA+AGG + chr8_1:65012698-65012717 None:intergenic 30.0%
! TTTTTATCCCAAAGTACACT+AGG + chr8_1:65013027-65013046 None:intergenic 30.0%
AATCTACTTAGTAGGTTAAG+AGG + chr8_1:65013185-65013204 None:intergenic 30.0%
!! CTTGTTAATTTGTGTGAAAC+AGG - chr8_1:65013547-65013566 Msa1207510:intron 30.0%
! ATGATGGTGAAATATTTCAG+TGG - chr8_1:65013708-65013727 Msa1207510:intron 30.0%
AATCATCAAATGACTCTGTT+TGG - chr8_1:65013742-65013761 Msa1207510:intron 30.0%
ATCATCAAATGACTCTGTTT+GGG - chr8_1:65013743-65013762 Msa1207510:intron 30.0%
! GATCACAATATAATTTGCCA+AGG + chr8_1:65013859-65013878 None:intergenic 30.0%
CTAAAGTTGTCATAAAGTAC+TGG + chr8_1:65013987-65014006 None:intergenic 30.0%
GTACCCAAAAAAATATGGAT+TGG + chr8_1:65014027-65014046 None:intergenic 30.0%
GTTCAATTTACTGCAACATT+TGG - chr8_1:65014104-65014123 Msa1207510:intron 30.0%
!!! TTACTGCAACATTTGGTTTT+AGG - chr8_1:65014111-65014130 Msa1207510:intron 30.0%
!!! TACTGCAACATTTGGTTTTA+GGG - chr8_1:65014112-65014131 Msa1207510:intron 30.0%
TAACTAAAGTTTCCCTCAAA+GGG + chr8_1:65014182-65014201 None:intergenic 30.0%
TTAACTAAAGTTTCCCTCAA+AGG + chr8_1:65014183-65014202 None:intergenic 30.0%
TGATATCCATGGTAAATGTT+TGG + chr8_1:65014488-65014507 None:intergenic 30.0%
TTAGAACTCTTTGATATCCA+TGG + chr8_1:65014499-65014518 None:intergenic 30.0%
GAAGGTAAACAAAAACTTCA+AGG - chr8_1:65014597-65014616 Msa1207510:CDS 30.0%
ATAAGTTTCCTCCAGAAATT+TGG + chr8_1:65014891-65014910 None:intergenic 30.0%
ATACGTCCTTTCTTCTAATT+AGG - chr8_1:65014915-65014934 Msa1207510:intron 30.0%
!! TGGATTTGTTGAAGATACAA+TGG - chr8_1:65014942-65014961 Msa1207510:intron 30.0%
!! GGATTTGTTGAAGATACAAT+GGG - chr8_1:65014943-65014962 Msa1207510:intron 30.0%
AAAAAAGCAGCCACATTATT+TGG - chr8_1:65014967-65014986 Msa1207510:intron 30.0%
TTTGACGAAGTGTAATCTTT+AGG + chr8_1:65015042-65015061 None:intergenic 30.0%
AAAGATTACACTTCGTCAAA+TGG - chr8_1:65015042-65015061 Msa1207510:intron 30.0%
AAATATGGAGAAACAAAGGT+TGG - chr8_1:65015393-65015412 Msa1207510:intron 30.0%
GATGATTAATTTATGCACCT+TGG - chr8_1:65015527-65015546 Msa1207510:intron 30.0%
! AACTTTTATCAAAGTCATGG+TGG + chr8_1:65015584-65015603 None:intergenic 30.0%
ATTCAGAAGTTAATCAAGTC+AGG - chr8_1:65015606-65015625 Msa1207510:intron 30.0%
TTCAGAAGTTAATCAAGTCA+GGG - chr8_1:65015607-65015626 Msa1207510:intron 30.0%
GGACAACATGTATAAATTGA+CGG + chr8_1:65015656-65015675 None:intergenic 30.0%
!!! GCGTGTATACATATTTTTTC+TGG - chr8_1:65015909-65015928 Msa1207510:intron 30.0%
TTGTCTCTACTATAATCAGA+TGG - chr8_1:65015970-65015989 Msa1207510:intron 30.0%
GCAGTTCAAAAATTGTATGA+TGG + chr8_1:65016104-65016123 None:intergenic 30.0%
! TTTTTCTTTGCATACAGTCA+AGG - chr8_1:65016258-65016277 Msa1207510:CDS 30.0%
TCAAGGAAAATGCAAGAAAA+TGG - chr8_1:65016275-65016294 Msa1207510:CDS 30.0%
! ATGCATCTTGATTTTTGTTC+AGG - chr8_1:65016444-65016463 Msa1207510:CDS 30.0%
! TTTTACATACCAAAGCATGT+TGG - chr8_1:65016474-65016493 Msa1207510:CDS 30.0%
AAGACTTGAAAGAATTAAGG+AGG + chr8_1:65016568-65016587 None:intergenic 30.0%
AAGAGAATCTTTATCCATTG+TGG + chr8_1:65016601-65016620 None:intergenic 30.0%
TGGATAAAGATTCTCTTCAT+TGG - chr8_1:65016604-65016623 Msa1207510:CDS 30.0%
! GATAAGGTTTTTCTATTACG+TGG + chr8_1:65016674-65016693 None:intergenic 30.0%
ATATGTTGCAAAACGGAAAT+TGG + chr8_1:65016740-65016759 None:intergenic 30.0%
TGCAACAGAATTAATAAACG+TGG + chr8_1:65016851-65016870 None:intergenic 30.0%
CATGCAAATTAATTAGTTGG+TGG - chr8_1:65016889-65016908 Msa1207510:five_prime_UTR 30.0%
!! CAAATTAATTAGTTGGTGGA+GGG - chr8_1:65016893-65016912 Msa1207510:five_prime_UTR 30.0%
TTATCTTAAACCTTCTTGCA+TGG - chr8_1:65016917-65016936 Msa1207510:five_prime_UTR 30.0%
GGTAGGTAGTAATAAAGGAA+TGG + chr8_1:65006605-65006624 None:intergenic 35.0%
AACAAAAGGGTAATGAAGGT+AGG + chr8_1:65006622-65006641 None:intergenic 35.0%
GTAGAACAAAAGGGTAATGA+AGG + chr8_1:65006626-65006645 None:intergenic 35.0%
!! GAAATTTTGTTTGGGAGAGT+GGG + chr8_1:65006700-65006719 None:intergenic 35.0%
!! TGAAATTTTGTTTGGGAGAG+TGG + chr8_1:65006701-65006720 None:intergenic 35.0%
GATTGAAAAAATGCGTGTGA+AGG - chr8_1:65007001-65007020 Msa1207510:intron 35.0%
AGTCCATTTGTAAAGAACTC+CGG + chr8_1:65007180-65007199 None:intergenic 35.0%
!! AAATGGACTAATTACGGCAA+AGG - chr8_1:65007191-65007210 Msa1207510:intron 35.0%
! AATAAGAAAGTACGCCATTG+CGG + chr8_1:65007241-65007260 None:intergenic 35.0%
AAGGTTTATGACTCTTCTGA+CGG + chr8_1:65007385-65007404 None:intergenic 35.0%
TCCTTCAGTTGTTCATCTAA+AGG - chr8_1:65007418-65007437 Msa1207510:intron 35.0%
ACCTTTAGATGAACAACTGA+AGG + chr8_1:65007422-65007441 None:intergenic 35.0%
TGAATCACTCGTTATAGTGT+GGG - chr8_1:65007595-65007614 Msa1207510:intron 35.0%
! CAGTGTCATGTTCAACATTT+TGG - chr8_1:65007645-65007664 Msa1207510:intron 35.0%
CTCAATCTGAATCTGAATCA+TGG + chr8_1:65007823-65007842 None:intergenic 35.0%
TCAGATTGAGATTGTTCTTC+TGG - chr8_1:65007833-65007852 Msa1207510:intron 35.0%
TCACCCAAATTATAAACCGT+TGG + chr8_1:65007923-65007942 None:intergenic 35.0%
AACTGGTTGTTAATGTAGAG+TGG - chr8_1:65007990-65008009 Msa1207510:intron 35.0%
ACTGGTTGTTAATGTAGAGT+GGG - chr8_1:65007991-65008010 Msa1207510:intron 35.0%
GAAGTAAATGCCATAGGATA+GGG + chr8_1:65008077-65008096 None:intergenic 35.0%
TATCCTATGGCATTTACTTC+CGG - chr8_1:65008077-65008096 Msa1207510:intron 35.0%
GGTAGGAAATGCAGAAAAAA+TGG + chr8_1:65008192-65008211 None:intergenic 35.0%
AAAATGGCAAGAGATAAGGT+AGG + chr8_1:65008209-65008228 None:intergenic 35.0%
GCTTAAAATGGCAAGAGATA+AGG + chr8_1:65008213-65008232 None:intergenic 35.0%
GACAAAGACAAAAGAGAAGA+TGG + chr8_1:65008408-65008427 None:intergenic 35.0%
! TTCATGATATCCGGTTGATA+AGG - chr8_1:65008661-65008680 Msa1207510:CDS 35.0%
CGTTGTATCTATTGTCAACA+AGG - chr8_1:65008713-65008732 Msa1207510:CDS 35.0%
GATAGATGATGACAGTTTAG+TGG + chr8_1:65009033-65009052 None:intergenic 35.0%
TAAGAAACGTTTGCTTGAAG+AGG - chr8_1:65009092-65009111 Msa1207510:intron 35.0%
AAGAAACGTTTGCTTGAAGA+GGG - chr8_1:65009093-65009112 Msa1207510:intron 35.0%
TAGCAGTGAAAATCTTGTGA+AGG - chr8_1:65009116-65009135 Msa1207510:intron 35.0%
ATTCTTTGTCAAGAACGATC+TGG - chr8_1:65009192-65009211 Msa1207510:intron 35.0%
!! CTGGTTTGTTTGATACCATT+AGG - chr8_1:65009211-65009230 Msa1207510:intron 35.0%
TGATACCATTAGGCAATTAG+AGG - chr8_1:65009221-65009240 Msa1207510:intron 35.0%
!! GAACTCAGAAGCATTCAAAA+AGG + chr8_1:65009284-65009303 None:intergenic 35.0%
!! ATTTTGAAGAACGGAACATG+TGG - chr8_1:65009389-65009408 Msa1207510:intron 35.0%
ATGCTTCCCAAGAAATGTTT+GGG + chr8_1:65009574-65009593 None:intergenic 35.0%
TATGCTTCCCAAGAAATGTT+TGG + chr8_1:65009575-65009594 None:intergenic 35.0%
CAATGAAAGCTCAAGCATTA+GGG + chr8_1:65009634-65009653 None:intergenic 35.0%
TCAATGAAAGCTCAAGCATT+AGG + chr8_1:65009635-65009654 None:intergenic 35.0%
! CATGATGTGTTTGGTTCATT+TGG - chr8_1:65010252-65010271 Msa1207510:intron 35.0%
! CCATCAGAGGTGTAAAATAA+TGG + chr8_1:65010318-65010337 None:intergenic 35.0%
!! CCATTATTTTACACCTCTGA+TGG - chr8_1:65010315-65010334 Msa1207510:intron 35.0%
TTTAGACCATTTCTTTGGGT+GGG + chr8_1:65010369-65010388 None:intergenic 35.0%
ATTTAGACCATTTCTTTGGG+TGG + chr8_1:65010370-65010389 None:intergenic 35.0%
! TTTGCCTGTGTTTAAGTTTC+TGG - chr8_1:65010498-65010517 Msa1207510:intron 35.0%
ACATCCAGAAACTTAAACAC+AGG + chr8_1:65010505-65010524 None:intergenic 35.0%
! TGTGTTTAAGTTTCTGGATG+TGG - chr8_1:65010504-65010523 Msa1207510:intron 35.0%
! GTGTTTAAGTTTCTGGATGT+GGG - chr8_1:65010505-65010524 Msa1207510:intron 35.0%
TATCAAGACAACAGAGATTC+CGG + chr8_1:65010790-65010809 None:intergenic 35.0%
!! GTACATCGAAATATTTTGGG+AGG - chr8_1:65011393-65011412 Msa1207510:intron 35.0%
TTAATATTGGAATGAGGGAG+TGG - chr8_1:65011467-65011486 Msa1207510:intron 35.0%
TAATATTGGAATGAGGGAGT+GGG - chr8_1:65011468-65011487 Msa1207510:intron 35.0%
TTGTCGTTCACATGTACTAT+TGG - chr8_1:65011608-65011627 Msa1207510:intron 35.0%
CGATGATGTTGAAAAACATG+AGG - chr8_1:65011660-65011679 Msa1207510:CDS 35.0%
TGTTGAAAAACATGAGGTAG+AGG - chr8_1:65011666-65011685 Msa1207510:CDS 35.0%
!! AGAGACTATTTTTCAGACTC+TGG - chr8_1:65011727-65011746 Msa1207510:CDS 35.0%
!! TGTTAGTCAAGGCATTGATA+TGG - chr8_1:65011804-65011823 Msa1207510:CDS 35.0%
GGTATCCTCAAATAGTAAGA+CGG - chr8_1:65011866-65011885 Msa1207510:CDS 35.0%
GTCAATGATCAAAGACAATG+TGG - chr8_1:65011936-65011955 Msa1207510:CDS 35.0%
GCTCATTAAAGTATACTGGA+AGG + chr8_1:65011984-65012003 None:intergenic 35.0%
! CATTTCTGAAGGGATGATAT+TGG + chr8_1:65012006-65012025 None:intergenic 35.0%
! ATCCCTTCAGAAATGTTTTG+AGG - chr8_1:65012011-65012030 Msa1207510:CDS 35.0%
ATATGCTCTATCCAGAAGAT+AGG + chr8_1:65012049-65012068 None:intergenic 35.0%
!!! TTTCTATTTGTTTTGGCTGG+AGG - chr8_1:65012359-65012378 Msa1207510:intron 35.0%
TGAGGCAATTGATCAATACT+CGG + chr8_1:65012493-65012512 None:intergenic 35.0%
AACCATGTTAAGAACACTAC+TGG + chr8_1:65012916-65012935 None:intergenic 35.0%
TAAATCTTGAGGGTGAGTAT+TGG - chr8_1:65012982-65013001 Msa1207510:intron 35.0%
ATTGGTACCTAGTGTACTTT+GGG - chr8_1:65013017-65013036 Msa1207510:CDS 35.0%
!! GTGTACTTTGGGATAAAAAG+TGG - chr8_1:65013028-65013047 Msa1207510:CDS 35.0%
AGGTATGAGTTAATGGTTAG+AGG + chr8_1:65013165-65013184 None:intergenic 35.0%
! GGTTAAGAGGTATGAGTTAA+TGG + chr8_1:65013172-65013191 None:intergenic 35.0%
AAGTTAAGACTGATACCTTG+TGG - chr8_1:65013261-65013280 Msa1207510:intron 35.0%
TGGCAACCTTTGCAAAAATA+AGG - chr8_1:65013281-65013300 Msa1207510:intron 35.0%
!!! ATGCAGCCTTATTTTTGCAA+AGG + chr8_1:65013290-65013309 None:intergenic 35.0%
! AATAGGTTAGGTTGCTTGAT+AGG - chr8_1:65013352-65013371 Msa1207510:intron 35.0%
! ATAGGTTAGGTTGCTTGATA+GGG - chr8_1:65013353-65013372 Msa1207510:intron 35.0%
TGTGTTGGAAATTTCACGAA+TGG + chr8_1:65013464-65013483 None:intergenic 35.0%
CGTGAAATTTCCAACACATT+TGG - chr8_1:65013466-65013485 Msa1207510:intron 35.0%
!!! TTCATTCAAAGTTTTGGGGA+AGG - chr8_1:65013642-65013661 Msa1207510:intron 35.0%
TTCACCATCATCAAACTCTA+GGG + chr8_1:65013699-65013718 None:intergenic 35.0%
TTTCACCATCATCAAACTCT+AGG + chr8_1:65013700-65013719 None:intergenic 35.0%
TGAAATATTTCAGTGGAGCA+AGG - chr8_1:65013715-65013734 Msa1207510:intron 35.0%
TTGTGATCATCATGGGAATA+TGG - chr8_1:65013871-65013890 Msa1207510:intron 35.0%
! GACTGAAGTGTAAAAGTGTA+GGG + chr8_1:65014149-65014168 None:intergenic 35.0%
! TGACTGAAGTGTAAAAGTGT+AGG + chr8_1:65014150-65014169 None:intergenic 35.0%
TCAAATTGCATTCCCTTTGA+GGG - chr8_1:65014167-65014186 Msa1207510:intron 35.0%
CTATATCCAACCAAACTCTA+GGG + chr8_1:65014381-65014400 None:intergenic 35.0%
!!! GCTTATTTTGGATCATCTGT+TGG - chr8_1:65014845-65014864 Msa1207510:intron 35.0%
CAGTCACCTAATTAGAAGAA+AGG + chr8_1:65014924-65014943 None:intergenic 35.0%
CTTTCTTCTAATTAGGTGAC+TGG - chr8_1:65014922-65014941 Msa1207510:intron 35.0%
ATGGAACATTGTTGTGGAAA+AGG - chr8_1:65015061-65015080 Msa1207510:intron 35.0%
AAATTGTACCGAGTCAGATT+TGG + chr8_1:65015099-65015118 None:intergenic 35.0%
TCATTATACCTTTAGTCCTG+GGG + chr8_1:65015154-65015173 None:intergenic 35.0%
CTCATTATACCTTTAGTCCT+GGG + chr8_1:65015155-65015174 None:intergenic 35.0%
TGAAAGGTGATACAATGGAT+TGG + chr8_1:65015228-65015247 None:intergenic 35.0%
GGAATTTGAGAAGGCAAATA+TGG - chr8_1:65015378-65015397 Msa1207510:intron 35.0%
AGGCAAATATGGAGAAACAA+AGG - chr8_1:65015389-65015408 Msa1207510:intron 35.0%
GTTGGAAAAGAGACAAAGAA+TGG - chr8_1:65015411-65015430 Msa1207510:intron 35.0%
AAGCCACGTATCATTAACTA+GGG + chr8_1:65015863-65015882 None:intergenic 35.0%
TAATTGTGGCCATCAGTTAT+CGG + chr8_1:65016192-65016211 None:intergenic 35.0%
GAAAATGCAAGAAAATGGCT+GGG - chr8_1:65016280-65016299 Msa1207510:CDS 35.0%
TTTCGCAAAGAAGGTGAAAA+TGG - chr8_1:65016314-65016333 Msa1207510:CDS 35.0%
AATGGAACGTTTCGATATAC+TGG - chr8_1:65016332-65016351 Msa1207510:CDS 35.0%
! TTCGATATACTGGTGGATAT+TGG - chr8_1:65016342-65016361 Msa1207510:CDS 35.0%
! TCGATATACTGGTGGATATT+GGG - chr8_1:65016343-65016362 Msa1207510:CDS 35.0%
!! GCAAATTAATTAGTTGGTGG+AGG - chr8_1:65016892-65016911 Msa1207510:five_prime_UTR 35.0%
AGAGATATATAGCAGCCATT+TGG - chr8_1:65016965-65016984 Msa1207510:five_prime_UTR 35.0%
GTACTGCGACAAAAACAATA+AGG - chr8_1:65017047-65017066 Msa1207510:five_prime_UTR 35.0%
TGCGACAAAAACAATAAGGA+AGG - chr8_1:65017051-65017070 Msa1207510:five_prime_UTR 35.0%
GCGACAAAAACAATAAGGAA+GGG - chr8_1:65017052-65017071 Msa1207510:five_prime_UTR 35.0%
GGGTAGAATGGTAATTAGCT+TGG + chr8_1:65006584-65006603 None:intergenic 40.0%
AGTGGGAGACAATAACATCA+TGG + chr8_1:65006683-65006702 None:intergenic 40.0%
CAAGTAGAGTAGATCGAAGA+AGG + chr8_1:65006849-65006868 None:intergenic 40.0%
TAATTCACCGGAGTCATACA+CGG - chr8_1:65007073-65007092 Msa1207510:intron 40.0%
TTGCCGGAGTTCTTTACAAA+TGG - chr8_1:65007174-65007193 Msa1207510:intron 40.0%
TTATTCCAAGATCCGTTCAC+CGG - chr8_1:65007256-65007275 Msa1207510:CDS 40.0%
GAGAACAGATTGAGATTCTC+CGG + chr8_1:65007278-65007297 None:intergenic 40.0%
GAAGGAGAAGAAGATGAAGA+AGG + chr8_1:65007404-65007423 None:intergenic 40.0%
CTGAATCACTCGTTATAGTG+TGG - chr8_1:65007594-65007613 Msa1207510:intron 40.0%
TGGATTTCCACATTGTTGCT+CGG + chr8_1:65007903-65007922 None:intergenic 40.0%
GCAACAATGTGGAAATCCAA+CGG - chr8_1:65007904-65007923 Msa1207510:intron 40.0%
ATGCACTCTCACAATTGTGT+AGG + chr8_1:65008052-65008071 None:intergenic 40.0%
GGAAGTAAATGCCATAGGAT+AGG + chr8_1:65008078-65008097 None:intergenic 40.0%
!! CTCTCTCTGCTTTTCTTCAT+TGG - chr8_1:65008109-65008128 Msa1207510:intron 40.0%
! AGTGAAAGCATAGGAGCATA+TGG - chr8_1:65008364-65008383 Msa1207510:intron 40.0%
! AGCATAGGAGCATATGGAAT+TGG - chr8_1:65008370-65008389 Msa1207510:intron 40.0%
GGAGCATATGGAATTGGAAA+TGG - chr8_1:65008376-65008395 Msa1207510:intron 40.0%
AATATACCCCACCAACAAGA+TGG + chr8_1:65008458-65008477 None:intergenic 40.0%
TGGCTTCAACTGAAGAAGAA+TGG + chr8_1:65008561-65008580 None:intergenic 40.0%
! GGTGAATGATTTTGTCAAGC+TGG + chr8_1:65009529-65009548 None:intergenic 40.0%
TTGCTCTAACATGACTGTTG+TGG - chr8_1:65009858-65009877 Msa1207510:intron 40.0%
TGTTCACACAAACACACACA+TGG + chr8_1:65009930-65009949 None:intergenic 40.0%
CTCACATCACATGATGTGTT+TGG - chr8_1:65010243-65010262 Msa1207510:intron 40.0%
ACATACAGAAAGCAGCAAAC+TGG + chr8_1:65010479-65010498 None:intergenic 40.0%
! TTTTGTTGCTCATCACGAAC+AGG - chr8_1:65010566-65010585 Msa1207510:intron 40.0%
! ATATTTTCCACGCCCTAAAC+TGG + chr8_1:65010661-65010680 None:intergenic 40.0%
TTAGGGCGTGGAAAATATAG+TGG - chr8_1:65010663-65010682 Msa1207510:intron 40.0%
GATGAGCATATACTTGCATC+CGG - chr8_1:65010768-65010787 Msa1207510:intron 40.0%
TTTATCTTACTGCGTGGGTT+TGG + chr8_1:65011064-65011083 None:intergenic 40.0%
AACATTCACAGCCCATCAAT+TGG + chr8_1:65011148-65011167 None:intergenic 40.0%
!! AATTGATGGGCTGTGAATGT+TGG - chr8_1:65011147-65011166 Msa1207510:intron 40.0%
GCTATCAGAATGCAGTACAA+CGG - chr8_1:65011630-65011649 Msa1207510:CDS 40.0%
AAATCGAGTGAACATGTCTG+CGG - chr8_1:65011777-65011796 Msa1207510:CDS 40.0%
AGTAAGACGGAAAAAGCTTC+CGG - chr8_1:65011879-65011898 Msa1207510:CDS 40.0%
! TTTGGAGTACTCCTATCTTC+TGG - chr8_1:65012035-65012054 Msa1207510:CDS 40.0%
TGGATAGAGCATATGAGCAT+GGG - chr8_1:65012055-65012074 Msa1207510:intron 40.0%
AGCATATGAGCATGGGAAAA+AGG - chr8_1:65012062-65012081 Msa1207510:intron 40.0%
TCAATTGCCTCACAGTCAAT+TGG - chr8_1:65012501-65012520 Msa1207510:intron 40.0%
CTCTCACTCACAAAACTCTA+TGG + chr8_1:65012570-65012589 None:intergenic 40.0%
TGCATATCCAGAAACAGCAA+AGG + chr8_1:65012751-65012770 None:intergenic 40.0%
TCTGGATATGCATCATCAGA+AGG - chr8_1:65012759-65012778 Msa1207510:intron 40.0%
AAGCCCTTTAATCCCTTGTT+AGG - chr8_1:65012792-65012811 Msa1207510:intron 40.0%
AGCCCTTTAATCCCTTGTTA+GGG - chr8_1:65012793-65012812 Msa1207510:intron 40.0%
TCCCCTAACAAGGGATTAAA+GGG + chr8_1:65012798-65012817 None:intergenic 40.0%
TTCCCCTAACAAGGGATTAA+AGG + chr8_1:65012799-65012818 None:intergenic 40.0%
TCGTAAGTTTCCCCTAACAA+GGG + chr8_1:65012807-65012826 None:intergenic 40.0%
TTCGTAAGTTTCCCCTAACA+AGG + chr8_1:65012808-65012827 None:intergenic 40.0%
AACTCCTTTGTCAGGAAAGT+CGG + chr8_1:65012832-65012851 None:intergenic 40.0%
!! AGTTCGCTTCTTTTCTGAGA+AGG - chr8_1:65012848-65012867 Msa1207510:intron 40.0%
TGCCAGTAGTGTTCTTAACA+TGG - chr8_1:65012911-65012930 Msa1207510:intron 40.0%
TATTGGCACAGCTGTAAGAT+TGG - chr8_1:65012999-65013018 Msa1207510:intron 40.0%
GATTGGTACCTAGTGTACTT+TGG - chr8_1:65013016-65013035 Msa1207510:CDS 40.0%
! TTTTCACTAAGGATTGGACC+CGG - chr8_1:65013128-65013147 Msa1207510:intron 40.0%
TTAATGGTTAGAGGAGTAGG+AGG + chr8_1:65013156-65013175 None:intergenic 40.0%
GAGTTAATGGTTAGAGGAGT+AGG + chr8_1:65013159-65013178 None:intergenic 40.0%
! TTTTTGCAAAGGTTGCCACA+AGG + chr8_1:65013279-65013298 None:intergenic 40.0%
ATTGGAGTAAGGGTGAGAAT+AGG - chr8_1:65013335-65013354 Msa1207510:intron 40.0%
AGTAAGGGTGAGAATAGGTT+AGG - chr8_1:65013340-65013359 Msa1207510:intron 40.0%
TCAATTCAACTTGACCCAGT+TGG - chr8_1:65013665-65013684 Msa1207510:intron 40.0%
ATCAAATGACTCTGTTTGGG+TGG - chr8_1:65013746-65013765 Msa1207510:intron 40.0%
TCAAATGACTCTGTTTGGGT+GGG - chr8_1:65013747-65013766 Msa1207510:intron 40.0%
GTCAAATTGCATTCCCTTTG+AGG - chr8_1:65014166-65014185 Msa1207510:intron 40.0%
GCTATATCCAACCAAACTCT+AGG + chr8_1:65014382-65014401 None:intergenic 40.0%
AGCCACATTATTTGGCAAGT+GGG - chr8_1:65014975-65014994 Msa1207510:intron 40.0%
ATCCCACTTGCCAAATAATG+TGG + chr8_1:65014980-65014999 None:intergenic 40.0%
CGTCAAATGGAACATTGTTG+TGG - chr8_1:65015055-65015074 Msa1207510:intron 40.0%
CATTGTTGTGGAAAAGGACT+AGG - chr8_1:65015067-65015086 Msa1207510:intron 40.0%
CCTCATTATACCTTTAGTCC+TGG + chr8_1:65015156-65015175 None:intergenic 40.0%
! CCAGGACTAAAGGTATAATG+AGG - chr8_1:65015153-65015172 Msa1207510:intron 40.0%
ACGGTTGAAAGGTGATACAA+TGG + chr8_1:65015233-65015252 None:intergenic 40.0%
ATCAACGGCACTTAGAGAAT+GGG - chr8_1:65015356-65015375 Msa1207510:intron 40.0%
AGAGAATGGGGAATTTGAGA+AGG - chr8_1:65015369-65015388 Msa1207510:intron 40.0%
CAACCCTAGTTAATGATACG+TGG - chr8_1:65015857-65015876 Msa1207510:intron 40.0%
CAAGCCACGTATCATTAACT+AGG + chr8_1:65015864-65015883 None:intergenic 40.0%
CTAGTTAATGATACGTGGCT+TGG - chr8_1:65015862-65015881 Msa1207510:intron 40.0%
! AGTTTTTCGCCGATAACTGA+TGG - chr8_1:65016180-65016199 Msa1207510:intron 40.0%
GGAAAATGCAAGAAAATGGC+TGG - chr8_1:65016279-65016298 Msa1207510:CDS 40.0%
GATGGATGCCCAGATATATT+TGG - chr8_1:65016389-65016408 Msa1207510:CDS 40.0%
TGTGGAGTATAGGTTGCTTA+GGG + chr8_1:65016535-65016554 None:intergenic 40.0%
AAAGTTGTTGCCATGCAAGA+AGG + chr8_1:65016930-65016949 None:intergenic 40.0%
TGACTTCAATTGTCTATGGC+TGG - chr8_1:65017131-65017150 Msa1207510:five_prime_UTR 40.0%
GTAGAGTAGATCGAAGAAGG+AGG + chr8_1:65006846-65006865 None:intergenic 45.0%
TCCAATGAGATGCAGCACAA+CGG + chr8_1:65007035-65007054 None:intergenic 45.0%
AGGGATCGGAAGTAATTCAC+CGG - chr8_1:65007061-65007080 Msa1207510:intron 45.0%
GGACTAATTACGGCAAAGGA+TGG - chr8_1:65007195-65007214 Msa1207510:intron 45.0%
GATTGAGATTCTCCGGTGAA+CGG + chr8_1:65007271-65007290 None:intergenic 45.0%
ATCGACGACGTACGCTTAAT+CGG - chr8_1:65007302-65007321 Msa1207510:CDS 45.0%
TTGGTTACCGAGCAACAATG+TGG - chr8_1:65007893-65007912 Msa1207510:intron 45.0%
TGACCGGAAGTAAATGCCAT+AGG + chr8_1:65008083-65008102 None:intergenic 45.0%
GGACTTTCCATCTTGTTGGT+GGG - chr8_1:65008448-65008467 Msa1207510:intron 45.0%
GACTTTCCATCTTGTTGGTG+GGG - chr8_1:65008449-65008468 Msa1207510:intron 45.0%
! GTTGGTGGGGTATATTATCC+AGG - chr8_1:65008462-65008481 Msa1207510:intron 45.0%
AAGCTTGTATCCACGCTACA+CGG + chr8_1:65008987-65009006 None:intergenic 45.0%
TGTAGCGTGGATACAAGCTT+TGG - chr8_1:65008987-65009006 Msa1207510:intron 45.0%
TTTGGGGAGCTACAAAACGT+TGG + chr8_1:65009674-65009693 None:intergenic 45.0%
ATTTCTTTGGGTGGGAGAGA+GGG + chr8_1:65010361-65010380 None:intergenic 45.0%
!! TTTTAGGTGACGCTAGGAAG+TGG + chr8_1:65010414-65010433 None:intergenic 45.0%
AAAGCAGCAAACTGGAGAGA+TGG + chr8_1:65010471-65010490 None:intergenic 45.0%
! CAGGCTTTATCTTACTGCGT+GGG + chr8_1:65011069-65011088 None:intergenic 45.0%
GATATAGGGATATAGGACGG+AGG + chr8_1:65011258-65011277 None:intergenic 45.0%
TTCTCCTTCTCAACAGGATC+CGG + chr8_1:65011901-65011920 None:intergenic 45.0%
GATCCTGTTGAGAAGGAGAA+GGG - chr8_1:65011901-65011920 Msa1207510:CDS 45.0%
CTGGATAGAGCATATGAGCA+TGG - chr8_1:65012054-65012073 Msa1207510:intron 45.0%
!!! TTTGTTTTGGCTGGAGGAGT+TGG - chr8_1:65012365-65012384 Msa1207510:intron 45.0%
AACTGCACCAATTGACTGTG+AGG + chr8_1:65012511-65012530 None:intergenic 45.0%
TTCAGGGAAACAGTCTCCTT+CGG - chr8_1:65012709-65012728 Msa1207510:intron 45.0%
GCCCTTTAATCCCTTGTTAG+GGG - chr8_1:65012794-65012813 Msa1207510:intron 45.0%
AAGAAGCGAACTCCTTTGTC+AGG + chr8_1:65012840-65012859 None:intergenic 45.0%
GATAAAATCTTGAGGGCGAG+CGG - chr8_1:65013232-65013251 Msa1207510:intron 45.0%
! CTTTTCCAGACCCATCTGAT+TGG - chr8_1:65013317-65013336 Msa1207510:intron 45.0%
TTACTCCAATCAGATGGGTC+TGG + chr8_1:65013325-65013344 None:intergenic 45.0%
AGACCCATCTGATTGGAGTA+AGG - chr8_1:65013324-65013343 Msa1207510:intron 45.0%
GACCCATCTGATTGGAGTAA+GGG - chr8_1:65013325-65013344 Msa1207510:intron 45.0%
CACCCTTACTCCAATCAGAT+GGG + chr8_1:65013330-65013349 None:intergenic 45.0%
TCACCCTTACTCCAATCAGA+TGG + chr8_1:65013331-65013350 None:intergenic 45.0%
TCCATCCTCTACCTTCACAA+TGG + chr8_1:65013601-65013620 None:intergenic 45.0%
ATTGTGAAGGTAGAGGATGG+AGG - chr8_1:65013600-65013619 Msa1207510:intron 45.0%
! AAGGTAGAGGATGGAGGTTT+TGG - chr8_1:65013606-65013625 Msa1207510:intron 45.0%
! AGGTAGAGGATGGAGGTTTT+GGG - chr8_1:65013607-65013626 Msa1207510:intron 45.0%
CTGACCCTAGAGTTTGATGA+TGG - chr8_1:65013692-65013711 Msa1207510:intron 45.0%
CAAATGACTCTGTTTGGGTG+GGG - chr8_1:65013748-65013767 Msa1207510:intron 45.0%
CATGGGAATATGGAAATCCG+TGG - chr8_1:65013881-65013900 Msa1207510:intron 45.0%
AGGAATACTGGCGATTACCA+CGG + chr8_1:65013901-65013920 None:intergenic 45.0%
!! CCATGGTAAATGTTTGGTGC+CGG + chr8_1:65014482-65014501 None:intergenic 45.0%
ATCTGTTGGCAACTGCATGT+GGG - chr8_1:65014859-65014878 Msa1207510:intron 45.0%
GTGGGCACATTCCAAATTTC+TGG - chr8_1:65014877-65014896 Msa1207510:intron 45.0%
! GGCACATTCCAAATTTCTGG+AGG - chr8_1:65014880-65014899 Msa1207510:intron 45.0%
CAGCCACATTATTTGGCAAG+TGG - chr8_1:65014974-65014993 Msa1207510:intron 45.0%
TTGTACCGAGTCAGATTTGG+TGG + chr8_1:65015096-65015115 None:intergenic 45.0%
GGTAAGCTCATTCAGTGTGA+TGG + chr8_1:65015133-65015152 None:intergenic 45.0%
GGAGATGCACAAGAAGGAAA+AGG + chr8_1:65015207-65015226 None:intergenic 45.0%
! TGGATTGGAGATGCACAAGA+AGG + chr8_1:65015213-65015232 None:intergenic 45.0%
! TTCTCTAAGTGCCGTTGATC+AGG + chr8_1:65015355-65015374 None:intergenic 45.0%
GATCAACGGCACTTAGAGAA+TGG - chr8_1:65015355-65015374 Msa1207510:intron 45.0%
TCAACGGCACTTAGAGAATG+GGG - chr8_1:65015357-65015376 Msa1207510:intron 45.0%
TGATTCTCCAACCTTAACGC+TGG + chr8_1:65015554-65015573 None:intergenic 45.0%
TATACACGCTCACACATGTG+TGG + chr8_1:65015898-65015917 None:intergenic 45.0%
AAGAAAATGGCTGGGAACCT+AGG - chr8_1:65016288-65016307 Msa1207510:CDS 45.0%
GGAACGTTTCGATATACTGG+TGG - chr8_1:65016335-65016354 Msa1207510:CDS 45.0%
TATTGGGAAGCAAGAGCTGT+AGG - chr8_1:65016359-65016378 Msa1207510:CDS 45.0%
AAGCAAGAGCTGTAGGATCA+TGG - chr8_1:65016366-65016385 Msa1207510:CDS 45.0%
AGCAAGAGCTGTAGGATCAT+GGG - chr8_1:65016367-65016386 Msa1207510:CDS 45.0%
! GTGGAGTATCCAACATGCTT+TGG + chr8_1:65016486-65016505 None:intergenic 45.0%
GTGTGGAGTATAGGTTGCTT+AGG + chr8_1:65016536-65016555 None:intergenic 45.0%
AACCTATACTCCACACGTGA+GGG - chr8_1:65016540-65016559 Msa1207510:CDS 45.0%
TATTACGTGGAGACGTAGTC+AGG + chr8_1:65016661-65016680 None:intergenic 45.0%
! AATGAGGCTTTTTGCAGCTC+TGG - chr8_1:65016998-65017017 Msa1207510:five_prime_UTR 45.0%
!! TTTTGCAGCTCTGGTTGGAA+AGG - chr8_1:65017007-65017026 Msa1207510:five_prime_UTR 45.0%
!! GTAAAAATAATTAAAAAAAA+TGG - chr8_1:65007860-65007879 Msa1207510:intron 5.0%
!!! AAATTATTATATACAAATTT+TGG + chr8_1:65009792-65009811 None:intergenic 5.0%
!!! GTATATAATAATTTTTTTTT+TGG - chr8_1:65009798-65009817 Msa1207510:CDS 5.0%
CCAATGAGATGCAGCACAAC+GGG + chr8_1:65007034-65007053 None:intergenic 50.0%
TGCATCTCATTGGAGAGTCC+AGG - chr8_1:65007041-65007060 Msa1207510:intron 50.0%
GCATCTCATTGGAGAGTCCA+GGG - chr8_1:65007042-65007061 Msa1207510:intron 50.0%
TCATTGGAGAGTCCAGGGAT+CGG - chr8_1:65007047-65007066 Msa1207510:intron 50.0%
GGTGAATTACTTCCGATCCC+TGG + chr8_1:65007062-65007081 None:intergenic 50.0%
ATACACGGCTGCACTTTCGA+GGG - chr8_1:65007088-65007107 Msa1207510:intron 50.0%
! AAGAAAGTACGCCATTGCGG+AGG + chr8_1:65007238-65007257 None:intergenic 50.0%
ATTCTCCGGTGAACGGATCT+TGG + chr8_1:65007264-65007283 None:intergenic 50.0%
CACTCGTTATAGTGTGGGTC+AGG - chr8_1:65007600-65007619 Msa1207510:intron 50.0%
GTGTGGGTCAGGACAATACT+AGG - chr8_1:65007611-65007630 Msa1207510:intron 50.0%
GTAGAGTGGGTCACATCAAC+AGG - chr8_1:65008004-65008023 Msa1207510:intron 50.0%
GAGTGCATAGCCCTATCCTA+TGG - chr8_1:65008064-65008083 Msa1207510:intron 50.0%
CGTGGGACTTTCCATCTTGT+TGG - chr8_1:65008444-65008463 Msa1207510:intron 50.0%
GGGACTTTCCATCTTGTTGG+TGG - chr8_1:65008447-65008466 Msa1207510:intron 50.0%
CATTTCTTTGGGTGGGAGAG+AGG + chr8_1:65010362-65010381 None:intergenic 50.0%
CTCTCTCCCACCCAAAGAAA+TGG - chr8_1:65010360-65010379 Msa1207510:intron 50.0%
!! GGATTTTCCAGTTTAGGGCG+TGG - chr8_1:65010651-65010670 Msa1207510:intron 50.0%
! CCAGGCTTTATCTTACTGCG+TGG + chr8_1:65011070-65011089 None:intergenic 50.0%
CCACGCAGTAAGATAAAGCC+TGG - chr8_1:65011067-65011086 Msa1207510:intron 50.0%
!!! TCAGACTCTGGTTTTAGGCG+TGG - chr8_1:65011739-65011758 Msa1207510:CDS 50.0%
!!! CAGACTCTGGTTTTAGGCGT+GGG - chr8_1:65011740-65011759 Msa1207510:CDS 50.0%
!!! GGTTTTAGGCGTGGGTCAAA+AGG - chr8_1:65011748-65011767 Msa1207510:CDS 50.0%
TCTGCGGAAGCTGTTAGTCA+AGG - chr8_1:65011793-65011812 Msa1207510:CDS 50.0%
GGATCCTGTTGAGAAGGAGA+AGG - chr8_1:65011900-65011919 Msa1207510:CDS 50.0%
!! AGGAGAAGGGCGTTAGTCTT+TGG - chr8_1:65011914-65011933 Msa1207510:CDS 50.0%
GGTGCAGTTGCCCACTATAA+TGG - chr8_1:65012522-65012541 Msa1207510:intron 50.0%
TCAGGGAAACAGTCTCCTTC+GGG - chr8_1:65012710-65012729 Msa1207510:intron 50.0%
!! GTTGCTGCCTTTGCTGTTTC+TGG - chr8_1:65012741-65012760 Msa1207510:intron 50.0%
! GAAGCCGACTTTCCTGACAA+AGG - chr8_1:65012825-65012844 Msa1207510:intron 50.0%
TTAGAGGAGTAGGAGGATCC+GGG + chr8_1:65013149-65013168 None:intergenic 50.0%
GTTAGAGGAGTAGGAGGATC+CGG + chr8_1:65013150-65013169 None:intergenic 50.0%
! GGTTAGTCACCATCCAACTG+TGG - chr8_1:65013568-65013587 Msa1207510:intron 50.0%
TCCTCTACCTTCACAATGGC+AGG + chr8_1:65013597-65013616 None:intergenic 50.0%
GCCATTGTGAAGGTAGAGGA+TGG - chr8_1:65013597-65013616 Msa1207510:intron 50.0%
CTAGGGTCAGAACTCCAACT+GGG + chr8_1:65013682-65013701 None:intergenic 50.0%
! TCTAGGGTCAGAACTCCAAC+TGG + chr8_1:65013683-65013702 None:intergenic 50.0%
GTAATCGCCAGTATTCCTGC+AGG - chr8_1:65013903-65013922 Msa1207510:intron 50.0%
ACTTGAGCCTGCAGGAATAC+TGG + chr8_1:65013913-65013932 None:intergenic 50.0%
CTCTTTGAACTTGAGCCTGC+AGG + chr8_1:65013921-65013940 None:intergenic 50.0%
TACTGGTAGAACCTCCTACC+TGG + chr8_1:65013970-65013989 None:intergenic 50.0%
CACTTCCACTCCCTAGAGTT+TGG - chr8_1:65014368-65014387 Msa1207510:intron 50.0%
TCCACTCCCTAGAGTTTGGT+TGG - chr8_1:65014372-65014391 Msa1207510:intron 50.0%
! TCCAACCAAACTCTAGGGAG+TGG + chr8_1:65014376-65014395 None:intergenic 50.0%
CCGGCACCAAACATTTACCA+TGG - chr8_1:65014479-65014498 Msa1207510:CDS 50.0%
CATCTGTTGGCAACTGCATG+TGG - chr8_1:65014858-65014877 Msa1207510:intron 50.0%
!! TACCGAGTCAGATTTGGTGG+TGG + chr8_1:65015093-65015112 None:intergenic 50.0%
ACACTGAATGAGCTTACCCC+AGG - chr8_1:65015135-65015154 Msa1207510:intron 50.0%
TGAGCTTACCCCAGGACTAA+AGG - chr8_1:65015143-65015162 Msa1207510:intron 50.0%
AAAGGAGAAGCTTCCACCCA+CGG - chr8_1:65015315-65015334 Msa1207510:intron 50.0%
AAAATGGCTGGGAACCTAGG+TGG - chr8_1:65016291-65016310 Msa1207510:CDS 50.0%
CCTTCTTTGCGAAACCACCT+AGG + chr8_1:65016308-65016327 None:intergenic 50.0%
CCTAGGTGGTTTCGCAAAGA+AGG - chr8_1:65016305-65016324 Msa1207510:CDS 50.0%
AGAGCTGTAGGATCATGGGA+TGG - chr8_1:65016371-65016390 Msa1207510:CDS 50.0%
CAACCTATACTCCACACGTG+AGG - chr8_1:65016539-65016558 Msa1207510:CDS 50.0%
!! AGGCTTTTTGCAGCTCTGGT+TGG - chr8_1:65017002-65017021 Msa1207510:five_prime_UTR 50.0%
CCCGTTGTGCTGCATCTCAT+TGG - chr8_1:65007031-65007050 Msa1207510:intron 55.0%
AGTGCAGCCGTGTATGACTC+CGG + chr8_1:65007083-65007102 None:intergenic 55.0%
CATACACGGCTGCACTTTCG+AGG - chr8_1:65007087-65007106 Msa1207510:intron 55.0%
TTCGAGGGCGAGGAGTTTAC+CGG - chr8_1:65007103-65007122 Msa1207510:intron 55.0%
ATGCAGTCAGATCCACTCGC+CGG + chr8_1:65007125-65007144 None:intergenic 55.0%
TCTGACTGCATTGTTCGCCG+TGG - chr8_1:65007134-65007153 Msa1207510:intron 55.0%
GTAAAGAACTCCGGCAACCG+TGG + chr8_1:65007171-65007190 None:intergenic 55.0%
GCAAAGGATGGAGATCCCGA+TGG - chr8_1:65007207-65007226 Msa1207510:intron 55.0%
ATTGCGGAGGAGGAACCATC+GGG + chr8_1:65007225-65007244 None:intergenic 55.0%
CATTGCGGAGGAGGAACCAT+CGG + chr8_1:65007226-65007245 None:intergenic 55.0%
AAAGTACGCCATTGCGGAGG+AGG + chr8_1:65007235-65007254 None:intergenic 55.0%
CATTCTGGCGAGACGATTCG+CGG + chr8_1:65007336-65007355 None:intergenic 55.0%
GCCAGAATGGATAGAGACGC+CGG - chr8_1:65007347-65007366 Msa1207510:CDS 55.0%
TCCGGCGTCTCTATCCATTC+TGG + chr8_1:65007351-65007370 None:intergenic 55.0%
GAGTGGGTCACATCAACAGG+TGG - chr8_1:65008007-65008026 Msa1207510:intron 55.0%
GTCACATCAACAGGTGGCTG+TGG - chr8_1:65008013-65008032 Msa1207510:intron 55.0%
ACATCAACAGGTGGCTGTGG+AGG - chr8_1:65008016-65008035 Msa1207510:intron 55.0%
CATCAACAGGTGGCTGTGGA+GGG - chr8_1:65008017-65008036 Msa1207510:intron 55.0%
GCAGAGAGAGTTGACGTGAC+CGG + chr8_1:65008099-65008118 None:intergenic 55.0%
CAAGGAAAGACCGTGTAGCG+TGG - chr8_1:65008974-65008993 Msa1207510:intron 55.0%
GCAGCTAACCTTGAACCCGA+GGG - chr8_1:65010588-65010607 Msa1207510:intron 55.0%
AAGCAGATCCCTCGGGTTCA+AGG + chr8_1:65010599-65010618 None:intergenic 55.0%
TCGTGCAAAGCAGATCCCTC+GGG + chr8_1:65010606-65010625 None:intergenic 55.0%
GTCGTGCAAAGCAGATCCCT+CGG + chr8_1:65010607-65010626 None:intergenic 55.0%
GCTTCCGGATCCTGTTGAGA+AGG - chr8_1:65011894-65011913 Msa1207510:CDS 55.0%
ACGCCCTTCTCCTTCTCAAC+AGG + chr8_1:65011907-65011926 None:intergenic 55.0%
CAGCAACGTTCAATGCCCGA+AGG + chr8_1:65012728-65012747 None:intergenic 55.0%
CAATGGCAGGCAACCACAGT+TGG + chr8_1:65013584-65013603 None:intergenic 55.0%
GTGGTTGCCTGCCATTGTGA+AGG - chr8_1:65013587-65013606 Msa1207510:intron 55.0%
GCCTGCCATTGTGAAGGTAG+AGG - chr8_1:65013593-65013612 Msa1207510:intron 55.0%
TCTTGACCGAAATCCTCGCC+AGG - chr8_1:65013949-65013968 Msa1207510:intron 55.0%
CTCCTACCTGGCGAGGATTT+CGG + chr8_1:65013958-65013977 None:intergenic 55.0%
GGCCACCACCAAATCTGACT+CGG - chr8_1:65015088-65015107 Msa1207510:intron 55.0%
CCAGGCTGAGACCTGATCAA+CGG - chr8_1:65015341-65015360 Msa1207510:intron 55.0%
TGCACCTTGGACCAGCGTTA+AGG - chr8_1:65015540-65015559 Msa1207510:intron 55.0%
CCAACCTTAACGCTGGTCCA+AGG + chr8_1:65015547-65015566 None:intergenic 55.0%
CCTTGGACCAGCGTTAAGGT+TGG - chr8_1:65015544-65015563 Msa1207510:intron 55.0%
GCTCACACATGTGTGGTCAG+TGG + chr8_1:65015891-65015910 None:intergenic 55.0%
TGCCCTCACGTGTGGAGTAT+AGG + chr8_1:65016545-65016564 None:intergenic 55.0%
GACTGCATTGTTCGCCGTGG+AGG - chr8_1:65007137-65007156 Msa1207510:intron 60.0%
CCGTGGCTTCTGATCCTCCA+CGG + chr8_1:65007154-65007173 None:intergenic 60.0%
CCGTGGAGGATCAGAAGCCA+CGG - chr8_1:65007151-65007170 Msa1207510:intron 60.0%
GGATCAGAAGCCACGGTTGC+CGG - chr8_1:65007158-65007177 Msa1207510:intron 60.0%
CGATGGTTCCTCCTCCGCAA+TGG - chr8_1:65007224-65007243 Msa1207510:intron 60.0%
CGCGAATCGTCTCGCCAGAA+TGG - chr8_1:65007334-65007353 Msa1207510:CDS 60.0%
!! CTGACGGCGAAGAGCGTTTC+CGG + chr8_1:65007369-65007388 None:intergenic 60.0%
AACAGGTGGCTGTGGAGGGT+AGG - chr8_1:65008021-65008040 Msa1207510:intron 60.0%
ACAGGTGGCTGTGGAGGGTA+GGG - chr8_1:65008022-65008041 Msa1207510:intron 60.0%
GGCAGCTAACCTTGAACCCG+AGG - chr8_1:65010587-65010606 Msa1207510:intron 60.0%
GGCAGGCAACCACAGTTGGA+TGG + chr8_1:65013580-65013599 None:intergenic 60.0%
GACCGAAATCCTCGCCAGGT+AGG - chr8_1:65013953-65013972 Msa1207510:intron 60.0%
CGAAATCCTCGCCAGGTAGG+AGG - chr8_1:65013956-65013975 Msa1207510:intron 60.0%
GTAGAACCTCCTACCTGGCG+AGG + chr8_1:65013965-65013984 None:intergenic 60.0%
AGCTTCCACCCACGGATTCC+AGG - chr8_1:65015323-65015342 Msa1207510:intron 60.0%
GGTCTCAGCCTGGAATCCGT+GGG + chr8_1:65015334-65015353 None:intergenic 60.0%
AGGTCTCAGCCTGGAATCCG+TGG + chr8_1:65015335-65015354 None:intergenic 60.0%
CCGTTGATCAGGTCTCAGCC+TGG + chr8_1:65015344-65015363 None:intergenic 60.0%
!! TAAGGAGGTGCCCTCACGTG+TGG + chr8_1:65016553-65016572 None:intergenic 60.0%
GCGAGGAGTTTACCGGCGAG+TGG - chr8_1:65007110-65007129 Msa1207510:intron 65.0%
CTCAGCCTGGAATCCGTGGG+TGG + chr8_1:65015331-65015350 None:intergenic 65.0%
CGGCTGCACTTTCGAGGGCG+AGG - chr8_1:65007093-65007112 Msa1207510:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 65006515 65017180 65006515 ID=Msa1207510;Name=Msa1207510
chr8_1 mRNA 65006515 65017180 65006515 ID=Msa1207510-mRNA-1;Parent=Msa1207510;Name=Msa1207510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=496|1|1|1|0.9|0.81|11|320|770
chr8_1 exon 65006515 65006823 65006515 ID=Msa1207510-mRNA-1:exon:21337;Parent=Msa1207510-mRNA-1
chr8_1 exon 65007230 65007420 65007230 ID=Msa1207510-mRNA-1:exon:21336;Parent=Msa1207510-mRNA-1
chr8_1 exon 65008263 65008376 65008263 ID=Msa1207510-mRNA-1:exon:21335;Parent=Msa1207510-mRNA-1
chr8_1 exon 65008531 65008758 65008531 ID=Msa1207510-mRNA-1:exon:21334;Parent=Msa1207510-mRNA-1
chr8_1 exon 65009725 65009865 65009725 ID=Msa1207510-mRNA-1:exon:21333;Parent=Msa1207510-mRNA-1
chr8_1 exon 65009959 65010126 65009959 ID=Msa1207510-mRNA-1:exon:21332;Parent=Msa1207510-mRNA-1
chr8_1 exon 65010826 65010981 65010826 ID=Msa1207510-mRNA-1:exon:21331;Parent=Msa1207510-mRNA-1
chr8_1 exon 65011612 65012057 65011612 ID=Msa1207510-mRNA-1:exon:21330;Parent=Msa1207510-mRNA-1
chr8_1 exon 65013011 65013107 65013011 ID=Msa1207510-mRNA-1:exon:21329;Parent=Msa1207510-mRNA-1
chr8_1 exon 65014453 65014806 65014453 ID=Msa1207510-mRNA-1:exon:21328;Parent=Msa1207510-mRNA-1
chr8_1 exon 65016256 65017180 65016256 ID=Msa1207510-mRNA-1:exon:21327;Parent=Msa1207510-mRNA-1
chr8_1 five_prime_UTR 65016685 65017180 65016685 ID=Msa1207510-mRNA-1:five_prime_utr;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65016256 65016684 65016256 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65014453 65014806 65014453 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65013011 65013107 65013011 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65011612 65012057 65011612 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65010826 65010981 65010826 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65009959 65010126 65009959 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65009725 65009865 65009725 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65008531 65008758 65008531 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65008263 65008376 65008263 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 CDS 65007241 65007420 65007241 ID=Msa1207510-mRNA-1:cds;Parent=Msa1207510-mRNA-1
chr8_1 three_prime_UTR 65007230 65007240 65007230 ID=Msa1207510-mRNA-1:three_prime_utr;Parent=Msa1207510-mRNA-1
chr8_1 three_prime_UTR 65006515 65006823 65006515 ID=Msa1207510-mRNA-1:three_prime_utr;Parent=Msa1207510-mRNA-1
Gene Sequence

>Msa1207510

ATGCGTGTGAAGGAAATGCACCCGTTGTGCTGCATCTCATTGGAGAGTCCAGGGATCGGAAGTAATTCACCGGAGTCATACACGGCTGCACTTTCGAGGGCGAGGAGTTTACCGGCGAGTGGATCTGACTGCATTGTTCGCCGTGGAGGATCAGAAGCCACGGTTGCCGGAGTTCTTTACAAATGGACTAATTACGGCAAAGGATGGAGATCCCGATGGTTCCTCCTCCGCAATGGCGTACTTTCTTATTCCAAGATCCGTTCACCGGAGAATCTCAATCTGTTCTCATCAATCGACGACGTACGCTTAATCGGAGATGTTACCGCGAATCGTCTCGCCAGAATGGATAGAGACGCCGGAAACGCTCTTCGCCGTCAGAAGAGTCATAAACCTTCTTCATCTTCTTCTCCTTCAGTTGTTCATCTAAAGATCTCATCTTTTAGAGAGAGCAAATCAGATGACAGAAAATTCTACATATTTACAGCAACAAAGACACTTCATTTGAGAACTGATTCAAGGAAAGACCGTGTAGCGTGGATACAAGCTTTGGTTTCAACTCGAAACTTGTATCCACTAAACTGTCATCATCTATCTCTTGCACCCTATCATATATCTGTATCAACTGAGAGGCTTAAGAAACGTTTGCTTGAAGAGGGTAGCAGTGAAAATCTTGTGAAGGAGTGTGAGCAAATCATGCTTGCTGAGTTTTCAGATTTACAAGAGAAGCTTCAAATTCTTTGTCAAGAACGATCTGGTTTGTTTGATACCATTAGGCAATTAGAGGCAGCTAACCTTGAACCCGAGGGATCTGCTTTGCACGACAGCGAATACCAATTAACAAAGAATGGATTTTCCAGTTTAGGGCGTGGAAAATATAGTGAATGCAGTACAACGGAATCATCCGATGATGTTGAAAAACATGAGGTAGAGGAAGTGTCAGAAGAAGATGAAATCTCATATTATGATACTAGAGACTATTTTTCAGACTCTGGTTTTAGGCGTGGGTCAAAAGGAGCGTCAAATCGAGTGAACATGTCTGCGGAAGCTGTTAGTCAAGGCATTGATATGGAAAATAGTCAGGTTGAGACAATGATGTATGATGATTATGGGTATCCTCAAATAGTAAGACGGAAAAAGCTTCCGGATCCTGTTGAGAAGGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGCAAAGATCTCACACGCGTTTGCCTTCCAGTATACTTTAATGAGCCAATATCATCCCTTCAGAAATGTTTTGAGGATTTGGAGTACTCCTATCTTCTGGATAGAGCATATGAGCATGGGAAAAAGGGAAACAGTCTCCTTCGGGCATTGAACGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCAGAAGGTCGTCATTGTAAGCCCTTTAATCCCTTGTTAGGGGAAACTTACGAAGCCGACTTTCCTGACAAAGGAGTTCGCTTCTTTTCTGAGAAGGTTAGTCACCATCCAACTGTGGTTGCCTGCCATTGTGAAGGTAGAGGATGGAGGTTTTGGGCAGACAGTAACATTCATTCAAAGTTTTGGGGAAGGTCAATTCAACTTGACCCAGTTGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAGTGGAGCAAGGTTACGACTACAATATATAACCTTATCCTTGGCAAATTATATTGTGATCATCATGGGAATATGGAAATCCGTGGTAATCGCCAGTATTCCTGCAGGCTCAAGTTCAAAGAGCAGACGCTTCTTGACCGAAATCCTCGCCAGGTGACTGGATTTGTTGAAGATACAATGGGAAAAAAAGCAGCCACATTATTTGGCAAGTGGGATGACAGCATTTATTATTTTGATGGTGATGTAAATGTCAAACCTAAAGATTACACTTCGTCAAATGGAACATTGTTGTGGAAAAGGACTAGGCCACCACCAAATCTGACTCGGTACAATTTGACATCATTTGCCATCACACTGAATGAGCTTACCCCAGGACTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCTGATCAACGGCACTTAGAGAATGGGGAATTTGAGAAGGCAAATATGGAGAAACAAAGGTTGGAAAAGAGACAAAGAATGTCAAGGAAAATGCAAGAAAATGGCTGGGAACCTAGGTGGTTTCGCAAAGAAGGTGAAAATGGAACGTTTCGATATACTGGTGGATATTGGGAAGCAAGAGCTGTAGGATCATGGGATGGATGCCCAGATATATTTGGTGAATTTCAAGAAAGCATAGTTGATCCTTTTGATGCATCTTGA
Protein sequence

>Msa1207510

MRVKEMHPLCCISLESPGIGSNSPESYTAALSRARSLPASGSDCIVRRGGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYSKIRSPENLNLFSSIDDVRLIGDVTANRLARMDRDAGNALRRQKSHKPSSSSSPSVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVSTRNLYPLNCHHLSLAPYHISVSTERLKKRLLEEGSSENLVKECEQIMLAEFSDLQEKLQILCQERSGLFDTIRQLEAANLEPEGSALHDSEYQLTKNGFSSLGRGKYSECSTTESSDDVEKHEVEEVSEEDEISYYDTRDYFSDSGFRRGSKGASNRVNMSAEAVSQGIDMENSQVETMMYDDYGYPQIVRRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHGKKGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCEGRGWRFWADSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKLYCDHHGNMEIRGNRQYSCRLKFKEQTLLDRNPRQVTGFVEDTMGKKAATLFGKWDDSIYYFDGDVNVKPKDYTSSNGTLLWKRTRPPPNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEFEKANMEKQRLEKRQRMSRKMQENGWEPRWFRKEGENGTFRYTGGYWEARAVGSWDGCPDIFGEFQESIVDPFDAS*