Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881480 | XP_003593245.1 | 98.978 | 685 | 6 | 1 | 1 | 684 | 1 | 685 | 0.0 | 1411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881480 | sp|Q9FMF5|RPT3_ARATH | 68.138 | 725 | 154 | 15 | 1 | 654 | 2 | 720 | 0.0 | 944 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881480 | G7IPM3 | 98.978 | 685 | 6 | 1 | 1 | 684 | 1 | 685 | 0.0 | 1411 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008290 | Msa0881480 | 0.818660 | 1.745798e-52 | -8.615850e-47 |
| Msa0008340 | Msa0881480 | 0.818007 | 2.453783e-52 | -8.615850e-47 |
| Msa0011850 | Msa0881480 | 0.813792 | 2.139205e-51 | -8.615850e-47 |
| Msa0024680 | Msa0881480 | 0.829614 | 4.664848e-55 | -8.615850e-47 |
| Msa0028060 | Msa0881480 | 0.860054 | 2.699235e-63 | -8.615850e-47 |
| Msa0029540 | Msa0881480 | -0.828208 | 1.021595e-54 | -8.615850e-47 |
| Msa0032370 | Msa0881480 | 0.818274 | 2.135482e-52 | -8.615850e-47 |
| Msa0046310 | Msa0881480 | 0.814536 | 1.465646e-51 | -8.615850e-47 |
| Msa0048020 | Msa0881480 | 0.808042 | 3.761845e-50 | -8.615850e-47 |
| Msa0051230 | Msa0881480 | -0.819854 | 9.334007e-53 | -8.615850e-47 |
| Msa0051430 | Msa0881480 | -0.829177 | 5.955816e-55 | -8.615850e-47 |
| Msa0057300 | Msa0881480 | 0.813729 | 2.208967e-51 | -8.615850e-47 |
| Msa0069260 | Msa0881480 | 0.809942 | 1.474776e-50 | -8.615850e-47 |
| Msa0069310 | Msa0881480 | 0.803438 | 3.485763e-49 | -8.615850e-47 |
| Msa0094420 | Msa0881480 | 0.810358 | 1.199201e-50 | -8.615850e-47 |
| Msa0096670 | Msa0881480 | 0.818176 | 2.246455e-52 | -8.615850e-47 |
| Msa0102750 | Msa0881480 | 0.804869 | 1.755838e-49 | -8.615850e-47 |
| Msa0105420 | Msa0881480 | 0.849256 | 3.634974e-60 | -8.615850e-47 |
| Msa0114540 | Msa0881480 | -0.820074 | 8.313602e-53 | -8.615850e-47 |
| Msa0120330 | Msa0881480 | 0.840444 | 8.661990e-58 | -8.615850e-47 |
| Msa0604360 | Msa0881480 | 0.814836 | 1.257955e-51 | -8.615850e-47 |
| Msa0621890 | Msa0881480 | 0.806622 | 7.523710e-50 | -8.615850e-47 |
| Msa0642650 | Msa0881480 | 0.838544 | 2.699606e-57 | -8.615850e-47 |
| Msa0647130 | Msa0881480 | 0.801760 | 7.735130e-49 | -8.615850e-47 |
| Msa0648520 | Msa0881480 | 0.808862 | 2.513933e-50 | -8.615850e-47 |
| Msa0669850 | Msa0881480 | 0.802336 | 5.888784e-49 | -8.615850e-47 |
| Msa0677400 | Msa0881480 | 0.801318 | 9.528325e-49 | -8.615850e-47 |
| Msa0681890 | Msa0881480 | 0.810295 | 1.237683e-50 | -8.615850e-47 |
| Msa0691050 | Msa0881480 | 0.816368 | 5.733492e-52 | -8.615850e-47 |
| Msa0693570 | Msa0881480 | 0.800304 | 1.534543e-48 | -8.615850e-47 |
| Msa0708080 | Msa0881480 | 0.805001 | 1.648047e-49 | -8.615850e-47 |
| Msa0734340 | Msa0881480 | 0.806389 | 8.425177e-50 | -8.615850e-47 |
| Msa0735470 | Msa0881480 | 0.807206 | 5.659557e-50 | -8.615850e-47 |
| Msa0743680 | Msa0881480 | 0.860879 | 1.518060e-63 | -8.615850e-47 |
| Msa0754720 | Msa0881480 | -0.847474 | 1.130211e-59 | -8.615850e-47 |
| Msa0756630 | Msa0881480 | -0.826603 | 2.477664e-54 | -8.615850e-47 |
| Msa0784620 | Msa0881480 | 0.860577 | 1.875278e-63 | -8.615850e-47 |
| Msa0792510 | Msa0881480 | 0.818193 | 2.227242e-52 | -8.615850e-47 |
| Msa0804840 | Msa0881480 | 0.823859 | 1.104125e-53 | -8.615850e-47 |
| Msa0820670 | Msa0881480 | 0.801220 | 9.976324e-49 | -8.615850e-47 |
| Msa0824730 | Msa0881480 | 0.831756 | 1.393659e-55 | -8.615850e-47 |
| Msa0138970 | Msa0881480 | -0.819608 | 1.062118e-52 | -8.615850e-47 |
| Msa0141430 | Msa0881480 | 0.808870 | 2.504593e-50 | -8.615850e-47 |
| Msa0142470 | Msa0881480 | 0.826979 | 2.014755e-54 | -8.615850e-47 |
| Msa0168100 | Msa0881480 | 0.802981 | 4.333883e-49 | -8.615850e-47 |
| Msa0168250 | Msa0881480 | 0.804473 | 2.124057e-49 | -8.615850e-47 |
| Msa0172350 | Msa0881480 | 0.879768 | 9.512200e-70 | -8.615850e-47 |
| Msa0181520 | Msa0881480 | 0.825298 | 5.059127e-54 | -8.615850e-47 |
| Msa0189950 | Msa0881480 | 0.994234 | 1.281626e-205 | -8.615850e-47 |
| Msa0193650 | Msa0881480 | 0.806611 | 7.562173e-50 | -8.615850e-47 |
| Msa0196130 | Msa0881480 | -0.807793 | 4.249812e-50 | -8.615850e-47 |
| Msa0207000 | Msa0881480 | 0.811185 | 7.945468e-51 | -8.615850e-47 |
| Msa0217400 | Msa0881480 | 0.801876 | 7.322852e-49 | -8.615850e-47 |
| Msa0222920 | Msa0881480 | 0.853769 | 1.919636e-61 | -8.615850e-47 |
| Msa0369570 | Msa0881480 | 0.802351 | 5.845422e-49 | -8.615850e-47 |
| Msa0371610 | Msa0881480 | 0.814325 | 1.631867e-51 | -8.615850e-47 |
| Msa0377530 | Msa0881480 | 0.811268 | 7.622317e-51 | -8.615850e-47 |
| Msa0390470 | Msa0881480 | 0.804957 | 1.683195e-49 | -8.615850e-47 |
| Msa0393680 | Msa0881480 | 0.833592 | 4.879953e-56 | -8.615850e-47 |
| Msa0414950 | Msa0881480 | -0.838180 | 3.350536e-57 | -8.615850e-47 |
| Msa0420070 | Msa0881480 | 0.810393 | 1.178783e-50 | -8.615850e-47 |
| Msa0423360 | Msa0881480 | -0.823217 | 1.559604e-53 | -8.615850e-47 |
| Msa0429520 | Msa0881480 | -0.839242 | 1.781139e-57 | -8.615850e-47 |
| Msa0429530 | Msa0881480 | -0.802197 | 6.288967e-49 | -8.615850e-47 |
| Msa0436280 | Msa0881480 | -0.823541 | 1.310281e-53 | -8.615850e-47 |
| Msa0442880 | Msa0881480 | 0.804640 | 1.960077e-49 | -8.615850e-47 |
| Msa0466100 | Msa0881480 | 0.814091 | 1.838457e-51 | -8.615850e-47 |
| Msa0469910 | Msa0881480 | -0.812563 | 3.981607e-51 | -8.615850e-47 |
| Msa0239660 | Msa0881480 | 0.809035 | 2.308357e-50 | -8.615850e-47 |
| Msa0259560 | Msa0881480 | 0.815185 | 1.052208e-51 | -8.615850e-47 |
| Msa0260820 | Msa0881480 | -0.816186 | 6.296805e-52 | -8.615850e-47 |
| Msa0264350 | Msa0881480 | 0.858716 | 6.806188e-63 | -8.615850e-47 |
| Msa0267760 | Msa0881480 | 0.882391 | 1.083224e-70 | -8.615850e-47 |
| Msa0269360 | Msa0881480 | 0.817984 | 2.483057e-52 | -8.615850e-47 |
| Msa0275670 | Msa0881480 | 0.806879 | 6.638746e-50 | -8.615850e-47 |
| Msa0280900 | Msa0881480 | 0.807380 | 5.200890e-50 | -8.615850e-47 |
| Msa0299200 | Msa0881480 | 0.804551 | 2.045628e-49 | -8.615850e-47 |
| Msa0302450 | Msa0881480 | 0.858589 | 7.425067e-63 | -8.615850e-47 |
| Msa0311580 | Msa0881480 | 0.802812 | 4.696203e-49 | -8.615850e-47 |
| Msa0313990 | Msa0881480 | 0.803288 | 3.743944e-49 | -8.615850e-47 |
| Msa0314210 | Msa0881480 | 0.801008 | 1.102590e-48 | -8.615850e-47 |
| Msa0315150 | Msa0881480 | 0.966335 | 8.761341e-126 | -8.615850e-47 |
| Msa0356890 | Msa0881480 | -0.801135 | 1.038804e-48 | -8.615850e-47 |
| Msa0482870 | Msa0881480 | 0.806020 | 1.007503e-49 | -8.615850e-47 |
| Msa0490300 | Msa0881480 | 0.821094 | 4.846982e-53 | -8.615850e-47 |
| Msa0504240 | Msa0881480 | 0.802387 | 5.746407e-49 | -8.615850e-47 |
| Msa0511890 | Msa0881480 | 0.801104 | 1.053761e-48 | -8.615850e-47 |
| Msa0517490 | Msa0881480 | 0.814390 | 1.578756e-51 | -8.615850e-47 |
| Msa0521310 | Msa0881480 | 0.826808 | 2.214044e-54 | -8.615850e-47 |
| Msa0526700 | Msa0881480 | 0.851885 | 6.629276e-61 | -8.615850e-47 |
| Msa0526710 | Msa0881480 | 0.881910 | 1.619850e-70 | -8.615850e-47 |
| Msa0527600 | Msa0881480 | 0.816522 | 5.294881e-52 | -8.615850e-47 |
| Msa0532550 | Msa0881480 | 0.821979 | 3.026559e-53 | -8.615850e-47 |
| Msa0535030 | Msa0881480 | 0.807149 | 5.821161e-50 | -8.615850e-47 |
| Msa0535060 | Msa0881480 | 0.809363 | 1.963680e-50 | -8.615850e-47 |
| Msa0546380 | Msa0881480 | 0.819718 | 1.002741e-52 | -8.615850e-47 |
| Msa0569020 | Msa0881480 | 0.819918 | 9.024819e-53 | -8.615850e-47 |
| Msa0844530 | Msa0881480 | 0.805320 | 1.412934e-49 | -8.615850e-47 |
| Msa0863800 | Msa0881480 | 0.867504 | 1.303218e-65 | -8.615850e-47 |
| Msa0881480 | Msa0890250 | 0.812755 | 3.613699e-51 | -8.615850e-47 |
| Msa0881480 | Msa0907700 | 0.844826 | 5.942870e-59 | -8.615850e-47 |
| Msa0881480 | Msa0922540 | 0.832092 | 1.151095e-55 | -8.615850e-47 |
| Msa0881480 | Msa0925160 | 0.817744 | 2.812610e-52 | -8.615850e-47 |
| Msa0881480 | Msa0930780 | 0.800453 | 1.430969e-48 | -8.615850e-47 |
| Msa0881480 | Msa0977320 | 0.830479 | 2.869411e-55 | -8.615850e-47 |
| Msa0881480 | Msa0990520 | 0.800976 | 1.119513e-48 | -8.615850e-47 |
| Msa0881480 | Msa0996080 | 0.816719 | 4.783059e-52 | -8.615850e-47 |
| Msa0881480 | Msa1008490 | 0.822195 | 2.697873e-53 | -8.615850e-47 |
| Msa0881480 | Msa1020710 | 0.834362 | 3.131750e-56 | -8.615850e-47 |
| Msa0881480 | Msa1033440 | -0.807160 | 5.789659e-50 | -8.615850e-47 |
| Msa0881480 | Msa1036390 | 0.808703 | 2.718062e-50 | -8.615850e-47 |
| Msa0881480 | Msa1040120 | 0.900704 | 5.610274e-78 | -8.615850e-47 |
| Msa0881480 | Msa1044340 | 0.820258 | 7.541640e-53 | -8.615850e-47 |
| Msa0881480 | Msa1076680 | 0.807733 | 4.376068e-50 | -8.615850e-47 |
| Msa0881480 | Msa1083410 | 0.811242 | 7.721274e-51 | -8.615850e-47 |
| Msa0881480 | Msa1087470 | 0.802021 | 6.836693e-49 | -8.615850e-47 |
| Msa0881480 | Msa1090000 | 0.800098 | 1.690386e-48 | -8.615850e-47 |
| Msa0881480 | Msa1099030 | 0.826476 | 2.656906e-54 | -8.615850e-47 |
| Msa0881480 | Msa1123550 | 0.932681 | 5.905236e-95 | -8.615850e-47 |
| Msa0881480 | Msa1128160 | 0.838792 | 2.329785e-57 | -8.615850e-47 |
| Msa0881480 | Msa1143620 | 0.827271 | 1.715570e-54 | -8.615850e-47 |
| Msa0881480 | Msa1149760 | 0.822052 | 2.911551e-53 | -8.615850e-47 |
| Msa0881480 | Msa1165360 | 0.832778 | 7.783636e-56 | -8.615850e-47 |
| Msa0881480 | Msa1207510 | 0.809418 | 1.911376e-50 | -8.615850e-47 |
| Msa0881480 | Msa1215460 | 0.800134 | 1.661673e-48 | -8.615850e-47 |
| Msa0881480 | Msa1220230 | 0.801903 | 7.227329e-49 | -8.615850e-47 |
| Msa0881480 | Msa1221900 | 0.814209 | 1.731046e-51 | -8.615850e-47 |
| Msa0881480 | Msa1222970 | 0.808638 | 2.807279e-50 | -8.615850e-47 |
| Msa0881480 | Msa1237030 | 0.818649 | 1.755474e-52 | -8.615850e-47 |
| Msa0881480 | Msa1264020 | 0.820239 | 7.618773e-53 | -8.615850e-47 |
| Msa0881480 | Msa1265070 | 0.837644 | 4.602920e-57 | -8.615850e-47 |
| Msa0881480 | Msa1265960 | 0.804795 | 1.819407e-49 | -8.615850e-47 |
| Msa0881480 | Msa1269580 | -0.821893 | 3.169060e-53 | -8.615850e-47 |
| Msa0881480 | Msa1284300 | 0.808931 | 2.429546e-50 | -8.615850e-47 |
| Msa0881480 | Msa1323060 | 0.803219 | 3.869761e-49 | -8.615850e-47 |
| Msa0881480 | Msa1337730 | 0.840861 | 6.735509e-58 | -8.615850e-47 |
| Msa0881480 | Msa1360890 | -0.826050 | 3.356289e-54 | -8.615850e-47 |
| Msa0881480 | Msa1362510 | 0.814234 | 1.709337e-51 | -8.615850e-47 |
| Msa0881480 | Msa1364470 | -0.817845 | 2.668951e-52 | -8.615850e-47 |
| Msa0881480 | Msa1373510 | 0.805341 | 1.399083e-49 | -8.615850e-47 |
| Msa0881480 | Msa1373950 | 0.816306 | 5.920059e-52 | -8.615850e-47 |
| Msa0881480 | Msa1377100 | -0.823619 | 1.256720e-53 | -8.615850e-47 |
| Msa0881480 | Msa1385900 | 0.807966 | 3.903208e-50 | -8.615850e-47 |
| Msa0881480 | Msa1390310 | 0.879343 | 1.346239e-69 | -8.615850e-47 |
| Msa0881480 | Msa1390770 | 0.800750 | 1.245126e-48 | -8.615850e-47 |
| Msa0881480 | Msa1395530 | 0.810277 | 1.248889e-50 | -8.615850e-47 |
| Msa0881480 | Msa1398860 | 0.833253 | 5.930276e-56 | -8.615850e-47 |
| Msa0881480 | Msa1404540 | 0.802281 | 6.042410e-49 | -8.615850e-47 |
| Msa0881480 | Msa1408790 | 0.806323 | 8.696267e-50 | -8.615850e-47 |
| Msa0881480 | Msa1409520 | 0.819492 | 1.129101e-52 | -8.615850e-47 |
| Msa0881480 | Msa1427760 | 0.834099 | 3.645700e-56 | -8.615850e-47 |
| Msa0881480 | Msa1429360 | -0.819535 | 1.103681e-52 | -8.615850e-47 |
| Msa0881480 | Msa1431060 | 0.803547 | 3.308720e-49 | -8.615850e-47 |
| Msa0881480 | Msa1442300 | 0.839173 | 1.856361e-57 | -8.615850e-47 |
| Msa0881480 | Msa1447230 | 0.807407 | 5.132572e-50 | -8.615850e-47 |
| Msa0881480 | Msa1459390 | 0.832807 | 7.657316e-56 | -8.615850e-47 |
| Msa0881480 | Msa1465900 | 0.800301 | 1.536975e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881480 | MtrunA17_Chr2g0279481 | 98.978 | 685 | 6 | 1 | 1 | 684 | 1 | 685 | 0.0 | 1411 |
| Msa0881480 | MtrunA17_Chr4g0050021 | 80.904 | 686 | 112 | 9 | 1 | 684 | 1 | 669 | 0.0 | 1110 |
| Msa0881480 | MtrunA17_Chr8g0382231 | 41.888 | 678 | 300 | 12 | 3 | 663 | 13 | 613 | 2.61e-180 | 527 |
| Msa0881480 | MtrunA17_Chr2g0303541 | 38.889 | 666 | 357 | 11 | 23 | 677 | 5 | 631 | 1.87e-151 | 453 |
| Msa0881480 | MtrunA17_Chr2g0285511 | 38.202 | 623 | 325 | 11 | 19 | 635 | 1 | 569 | 5.81e-137 | 415 |
| Msa0881480 | MtrunA17_Chr2g0320691 | 37.157 | 619 | 332 | 12 | 27 | 632 | 6 | 580 | 1.21e-131 | 402 |
| Msa0881480 | MtrunA17_Chr5g0401341 | 41.231 | 536 | 248 | 11 | 23 | 548 | 5 | 483 | 4.66e-129 | 395 |
| Msa0881480 | MtrunA17_Chr5g0401451 | 36.780 | 590 | 298 | 7 | 32 | 612 | 28 | 551 | 9.04e-126 | 387 |
| Msa0881480 | MtrunA17_Chr8g0374011 | 35.945 | 651 | 331 | 12 | 34 | 639 | 10 | 619 | 1.31e-125 | 387 |
| Msa0881480 | MtrunA17_Chr4g0010091 | 36.084 | 618 | 332 | 9 | 33 | 645 | 24 | 583 | 4.26e-125 | 384 |
| Msa0881480 | MtrunA17_Chr1g0207461 | 38.716 | 545 | 276 | 11 | 23 | 558 | 5 | 500 | 2.13e-121 | 375 |
| Msa0881480 | MtrunA17_Chr1g0150191 | 38.806 | 536 | 267 | 10 | 19 | 547 | 6 | 487 | 3.95e-121 | 374 |
| Msa0881480 | MtrunA17_Chr1g0181181 | 37.430 | 537 | 277 | 8 | 23 | 555 | 5 | 486 | 3.40e-119 | 367 |
| Msa0881480 | MtrunA17_Chr8g0367891 | 40.217 | 552 | 240 | 10 | 23 | 552 | 5 | 488 | 4.23e-119 | 368 |
| Msa0881480 | MtrunA17_Chr1g0191711 | 34.171 | 597 | 286 | 13 | 33 | 622 | 47 | 543 | 1.29e-116 | 360 |
| Msa0881480 | MtrunA17_Chr4g0053841 | 36.227 | 599 | 300 | 8 | 32 | 620 | 1 | 527 | 2.67e-115 | 358 |
| Msa0881480 | MtrunA17_Chr4g0076521 | 37.665 | 531 | 274 | 8 | 23 | 552 | 5 | 479 | 5.30e-111 | 347 |
| Msa0881480 | MtrunA17_Chr5g0412591 | 38.156 | 553 | 255 | 11 | 23 | 552 | 5 | 493 | 1.02e-109 | 344 |
| Msa0881480 | MtrunA17_Chr1g0195911 | 32.609 | 644 | 355 | 12 | 20 | 647 | 13 | 593 | 1.28e-109 | 344 |
| Msa0881480 | MtrunA17_Chr1g0199631 | 36.007 | 586 | 315 | 11 | 62 | 641 | 8 | 539 | 2.30e-109 | 342 |
| Msa0881480 | MtrunA17_Chr7g0245201 | 35.605 | 587 | 308 | 15 | 36 | 614 | 53 | 577 | 2.66e-109 | 344 |
| Msa0881480 | MtrunA17_Chr7g0268781 | 31.523 | 663 | 382 | 13 | 20 | 666 | 13 | 619 | 6.93e-108 | 340 |
| Msa0881480 | MtrunA17_Chr3g0108331 | 32.848 | 618 | 324 | 9 | 32 | 646 | 12 | 541 | 7.19e-102 | 322 |
| Msa0881480 | MtrunA17_Chr5g0432861 | 34.165 | 521 | 284 | 7 | 32 | 552 | 13 | 474 | 7.87e-102 | 323 |
| Msa0881480 | MtrunA17_Chr2g0290741 | 35.370 | 540 | 278 | 8 | 23 | 559 | 5 | 476 | 1.21e-100 | 320 |
| Msa0881480 | MtrunA17_Chr4g0003891 | 37.250 | 400 | 194 | 7 | 233 | 629 | 46 | 391 | 3.11e-80 | 262 |
| Msa0881480 | MtrunA17_Chr2g0332281 | 35.232 | 474 | 239 | 7 | 219 | 684 | 10 | 423 | 8.94e-79 | 257 |
| Msa0881480 | MtrunA17_Chr4g0037661 | 28.453 | 601 | 333 | 17 | 47 | 626 | 6 | 530 | 2.38e-55 | 198 |
| Msa0881480 | MtrunA17_Chr1g0163311 | 27.725 | 523 | 269 | 14 | 54 | 546 | 14 | 457 | 8.86e-52 | 187 |
| Msa0881480 | MtrunA17_Chr4g0023801 | 27.243 | 602 | 356 | 17 | 53 | 644 | 14 | 543 | 2.26e-50 | 184 |
| Msa0881480 | MtrunA17_Chr1g0206621 | 45.255 | 137 | 73 | 1 | 51 | 185 | 75 | 211 | 1.19e-31 | 123 |
| Msa0881480 | MtrunA17_Chr2g0280541 | 26.258 | 457 | 259 | 11 | 110 | 560 | 1 | 385 | 1.17e-30 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0881480 | AT5G64330.1 | 68.138 | 725 | 154 | 15 | 1 | 654 | 2 | 720 | 0.0 | 944 |
| Msa0881480 | AT5G64330.2 | 68.252 | 652 | 133 | 14 | 1 | 584 | 2 | 647 | 0.0 | 844 |
| Msa0881480 | AT5G64330.3 | 68.430 | 586 | 124 | 11 | 57 | 584 | 6 | 588 | 0.0 | 759 |
| Msa0881480 | AT5G10250.2 | 39.124 | 639 | 278 | 12 | 30 | 643 | 36 | 588 | 1.65e-152 | 456 |
| Msa0881480 | AT5G10250.1 | 39.110 | 629 | 277 | 12 | 30 | 643 | 36 | 573 | 3.30e-149 | 447 |
| Msa0881480 | AT1G30440.1 | 38.148 | 637 | 348 | 10 | 23 | 643 | 5 | 611 | 2.56e-145 | 439 |
| Msa0881480 | AT5G03250.1 | 37.739 | 628 | 321 | 14 | 25 | 642 | 7 | 574 | 1.65e-131 | 400 |
| Msa0881480 | AT5G13600.1 | 37.500 | 616 | 319 | 12 | 19 | 629 | 1 | 555 | 1.78e-126 | 387 |
| Msa0881480 | AT5G67440.3 | 40.797 | 527 | 239 | 9 | 39 | 556 | 22 | 484 | 4.19e-124 | 381 |
| Msa0881480 | AT5G67440.1 | 40.797 | 527 | 239 | 9 | 39 | 556 | 22 | 484 | 4.19e-124 | 381 |
| Msa0881480 | AT3G44820.1 | 35.738 | 610 | 348 | 9 | 27 | 624 | 6 | 583 | 1.90e-121 | 377 |
| Msa0881480 | AT5G67385.1 | 39.205 | 528 | 262 | 7 | 32 | 557 | 13 | 483 | 3.74e-121 | 374 |
| Msa0881480 | AT1G67900.5 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT1G67900.1 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT1G67900.3 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT1G67900.6 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT1G67900.2 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT1G67900.4 | 38.995 | 577 | 284 | 8 | 23 | 578 | 5 | 534 | 2.77e-120 | 373 |
| Msa0881480 | AT2G14820.2 | 38.095 | 546 | 278 | 11 | 23 | 558 | 5 | 500 | 6.77e-116 | 362 |
| Msa0881480 | AT2G14820.1 | 38.095 | 546 | 278 | 11 | 23 | 558 | 5 | 500 | 6.77e-116 | 362 |
| Msa0881480 | AT4G31820.1 | 37.782 | 532 | 257 | 12 | 23 | 548 | 5 | 468 | 6.97e-116 | 359 |
| Msa0881480 | AT5G48800.1 | 35.410 | 610 | 327 | 7 | 37 | 642 | 34 | 580 | 1.67e-114 | 357 |
| Msa0881480 | AT5G67440.2 | 40.237 | 507 | 230 | 9 | 59 | 556 | 5 | 447 | 3.34e-114 | 354 |
| Msa0881480 | AT4G37590.1 | 36.348 | 597 | 280 | 13 | 23 | 605 | 5 | 515 | 1.34e-111 | 348 |
| Msa0881480 | AT1G03010.1 | 32.428 | 663 | 339 | 14 | 21 | 647 | 14 | 603 | 4.45e-111 | 349 |
| Msa0881480 | AT3G08570.1 | 34.740 | 616 | 324 | 12 | 40 | 646 | 30 | 576 | 8.08e-111 | 348 |
| Msa0881480 | AT1G03010.2 | 33.022 | 642 | 322 | 13 | 42 | 647 | 7 | 576 | 5.09e-110 | 345 |
| Msa0881480 | AT5G66560.1 | 33.333 | 687 | 343 | 15 | 28 | 646 | 3 | 642 | 6.88e-110 | 347 |
| Msa0881480 | AT1G03010.3 | 33.022 | 642 | 322 | 13 | 42 | 647 | 33 | 602 | 1.62e-109 | 345 |
| Msa0881480 | AT2G30520.1 | 35.163 | 583 | 303 | 8 | 32 | 614 | 18 | 525 | 3.25e-109 | 343 |
| Msa0881480 | AT5G67385.4 | 38.788 | 495 | 244 | 7 | 65 | 557 | 1 | 438 | 6.06e-108 | 338 |
| Msa0881480 | AT5G67385.5 | 38.788 | 495 | 244 | 7 | 65 | 557 | 1 | 438 | 6.06e-108 | 338 |
| Msa0881480 | AT5G67385.2 | 38.788 | 495 | 244 | 7 | 65 | 557 | 1 | 438 | 6.06e-108 | 338 |
| Msa0881480 | AT5G67385.3 | 38.788 | 495 | 244 | 7 | 65 | 557 | 1 | 438 | 6.06e-108 | 338 |
| Msa0881480 | AT5G47800.3 | 36.571 | 525 | 277 | 7 | 23 | 546 | 5 | 474 | 4.95e-105 | 331 |
| Msa0881480 | AT5G47800.1 | 36.571 | 525 | 277 | 7 | 23 | 546 | 5 | 474 | 4.95e-105 | 331 |
| Msa0881480 | AT5G47800.4 | 36.571 | 525 | 277 | 7 | 23 | 546 | 5 | 474 | 4.95e-105 | 331 |
| Msa0881480 | AT5G47800.2 | 36.571 | 525 | 277 | 7 | 23 | 546 | 118 | 587 | 1.90e-103 | 330 |
| Msa0881480 | AT5G66560.3 | 33.687 | 659 | 322 | 15 | 56 | 646 | 2 | 613 | 1.31e-102 | 327 |
| Msa0881480 | AT2G47860.1 | 32.558 | 645 | 324 | 16 | 17 | 624 | 2 | 572 | 1.34e-102 | 327 |
| Msa0881480 | AT3G26490.1 | 35.856 | 555 | 279 | 12 | 25 | 552 | 7 | 511 | 8.44e-102 | 323 |
| Msa0881480 | AT3G26490.3 | 35.856 | 555 | 279 | 12 | 25 | 552 | 7 | 511 | 8.44e-102 | 323 |
| Msa0881480 | AT3G26490.4 | 35.856 | 555 | 279 | 12 | 25 | 552 | 7 | 511 | 8.44e-102 | 323 |
| Msa0881480 | AT2G23050.1 | 36.704 | 534 | 242 | 10 | 23 | 548 | 5 | 450 | 1.11e-101 | 320 |
| Msa0881480 | AT3G08660.1 | 33.929 | 616 | 302 | 16 | 40 | 646 | 30 | 549 | 1.27e-101 | 323 |
| Msa0881480 | AT4G31820.2 | 37.474 | 483 | 229 | 11 | 71 | 548 | 1 | 415 | 1.69e-101 | 320 |
| Msa0881480 | AT5G66560.4 | 35.214 | 585 | 308 | 13 | 86 | 646 | 66 | 603 | 5.19e-99 | 317 |
| Msa0881480 | AT2G47860.3 | 31.437 | 668 | 324 | 17 | 17 | 624 | 2 | 595 | 1.95e-97 | 314 |
| Msa0881480 | AT2G30520.2 | 34.122 | 592 | 308 | 10 | 64 | 649 | 2 | 517 | 1.19e-95 | 306 |
| Msa0881480 | AT2G30520.3 | 34.122 | 592 | 308 | 10 | 64 | 649 | 2 | 517 | 1.19e-95 | 306 |
| Msa0881480 | AT3G50840.1 | 33.225 | 614 | 326 | 13 | 34 | 639 | 5 | 542 | 1.52e-94 | 304 |
| Msa0881480 | AT3G08660.3 | 34.862 | 545 | 257 | 13 | 86 | 621 | 15 | 470 | 1.79e-91 | 294 |
| Msa0881480 | AT5G03250.2 | 35.057 | 522 | 271 | 13 | 129 | 642 | 1 | 462 | 7.66e-89 | 286 |
| Msa0881480 | AT3G49970.1 | 33.214 | 560 | 260 | 10 | 56 | 614 | 6 | 452 | 4.70e-88 | 285 |
| Msa0881480 | AT3G49970.2 | 33.214 | 560 | 260 | 10 | 56 | 614 | 6 | 452 | 4.70e-88 | 285 |
| Msa0881480 | AT3G50840.2 | 32.990 | 582 | 307 | 12 | 65 | 639 | 1 | 506 | 3.38e-83 | 273 |
| Msa0881480 | AT3G50840.3 | 32.990 | 582 | 307 | 12 | 65 | 639 | 1 | 506 | 3.38e-83 | 273 |
| Msa0881480 | AT5G66560.2 | 34.170 | 518 | 240 | 12 | 34 | 497 | 9 | 479 | 3.46e-79 | 261 |
| Msa0881480 | AT3G15570.1 | 33.546 | 471 | 247 | 9 | 233 | 684 | 29 | 452 | 2.39e-78 | 258 |
| Msa0881480 | AT3G26490.2 | 33.533 | 501 | 256 | 12 | 25 | 498 | 7 | 457 | 1.35e-76 | 254 |
| Msa0881480 | AT2G47860.4 | 33.140 | 516 | 236 | 14 | 17 | 497 | 2 | 443 | 1.65e-76 | 252 |
| Msa0881480 | AT1G52770.1 | 33.532 | 504 | 258 | 13 | 206 | 684 | 3 | 454 | 2.88e-75 | 249 |
| Msa0881480 | AT3G08660.2 | 34.115 | 469 | 219 | 11 | 40 | 499 | 30 | 417 | 7.32e-75 | 248 |
| Msa0881480 | AT2G47860.6 | 31.540 | 539 | 237 | 15 | 17 | 497 | 2 | 466 | 2.33e-71 | 239 |
| Msa0881480 | AT2G23050.2 | 34.679 | 421 | 187 | 8 | 129 | 548 | 1 | 334 | 4.23e-69 | 230 |
| Msa0881480 | AT2G47860.5 | 30.153 | 524 | 268 | 12 | 129 | 624 | 1 | 454 | 1.69e-65 | 225 |
| Msa0881480 | AT2G47860.2 | 30.153 | 524 | 268 | 12 | 129 | 624 | 1 | 454 | 1.69e-65 | 225 |
| Msa0881480 | AT1G50280.1 | 28.770 | 504 | 289 | 10 | 53 | 542 | 13 | 460 | 1.60e-49 | 181 |
| Msa0881480 | AT1G50280.2 | 29.399 | 466 | 264 | 9 | 86 | 542 | 18 | 427 | 1.01e-48 | 179 |
| Msa0881480 | AT5G17580.2 | 27.451 | 510 | 291 | 11 | 46 | 549 | 22 | 458 | 2.37e-41 | 159 |
| Msa0881480 | AT5G17580.1 | 27.255 | 510 | 292 | 10 | 46 | 549 | 7 | 443 | 4.95e-41 | 158 |
| Msa0881480 | AT3G03510.1 | 26.344 | 558 | 276 | 16 | 98 | 648 | 8 | 437 | 1.31e-39 | 152 |
| Msa0881480 | AT3G22104.1 | 26.869 | 495 | 275 | 13 | 46 | 533 | 6 | 420 | 1.52e-39 | 153 |
| Msa0881480 | AT3G19850.1 | 35.115 | 262 | 152 | 3 | 341 | 602 | 273 | 516 | 3.27e-38 | 150 |
| Msa0881480 | AT3G19850.1 | 32.143 | 168 | 98 | 2 | 86 | 240 | 52 | 216 | 8.63e-17 | 84.7 |
| Msa0881480 | AT5G48130.1 | 33.333 | 240 | 143 | 5 | 37 | 272 | 32 | 258 | 5.68e-36 | 144 |
| Msa0881480 | AT5G48130.1 | 34.921 | 126 | 79 | 1 | 432 | 557 | 356 | 478 | 1.41e-18 | 90.5 |
| Msa0881480 | AT3G22104.4 | 25.532 | 423 | 231 | 10 | 115 | 533 | 3 | 345 | 3.46e-27 | 115 |
| Msa0881480 | AT3G22104.2 | 25.532 | 423 | 231 | 10 | 115 | 533 | 3 | 345 | 3.46e-27 | 115 |
| Msa0881480 | AT3G22104.3 | 25.532 | 423 | 231 | 10 | 115 | 533 | 3 | 345 | 3.46e-27 | 115 |
| Msa0881480 | AT3G49900.2 | 36.306 | 157 | 88 | 5 | 34 | 184 | 55 | 205 | 8.92e-16 | 81.3 |
| Msa0881480 | AT3G49900.1 | 36.306 | 157 | 88 | 5 | 34 | 184 | 55 | 205 | 8.99e-16 | 81.3 |
Find 131 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAACAGCAGGGAACATTTC+TGG | 0.175923 | 6_1:-28667925 | Msa0881480:CDS |
| CCACTCTTGCTTTAGCATTA+AGG | 0.194475 | 6_1:+28666936 | None:intergenic |
| GAGAATGGCAATTATGTTAA+AGG | 0.217758 | 6_1:-28667185 | Msa0881480:CDS |
| TAGAGTCATTACTGCTATTA+AGG | 0.220033 | 6_1:-28667521 | Msa0881480:CDS |
| TCTTTCATTGACAAAGTTTC+AGG | 0.239657 | 6_1:-28666867 | Msa0881480:CDS |
| AAAATGAAAGGCTTCCATTA+AGG | 0.246972 | 6_1:-28666099 | Msa0881480:CDS |
| ATGCATCAATTGAGAGTTTC+TGG | 0.254350 | 6_1:+28666137 | None:intergenic |
| AGCAATTCCATAGCAGAATT+TGG | 0.262431 | 6_1:+28667954 | None:intergenic |
| TCTTTACCTGTTCTGCAAAT+AGG | 0.263165 | 6_1:+28666062 | None:intergenic |
| AGTTATGAGTTTATTAGATT+TGG | 0.263352 | 6_1:+28668955 | None:intergenic |
| TAGCAGTTGTCCATCCTTCT+TGG | 0.266447 | 6_1:+28665936 | None:intergenic |
| TTAATTCCTTGTTATAATAA+AGG | 0.275835 | 6_1:-28667088 | Msa0881480:CDS |
| AAAATTGTTGGAGGTGTTAC+AGG | 0.276384 | 6_1:+28668881 | None:intergenic |
| ATTACTGCTATTAAGGTAAA+AGG | 0.277571 | 6_1:-28667514 | Msa0881480:CDS |
| ACTTGCACAACTACCCTTAA+TGG | 0.282327 | 6_1:+28666085 | None:intergenic |
| GGAATGAGATTTGAGTTAAT+TGG | 0.282402 | 6_1:-28667493 | Msa0881480:CDS |
| ACAAAATGTACTGTTCTAAA+AGG | 0.286994 | 6_1:+28668725 | None:intergenic |
| CTAATCCAAAAGGGATAAAA+TGG | 0.293832 | 6_1:-28667690 | Msa0881480:CDS |
| TTTGGAGCTTCAAAATGATA+TGG | 0.295839 | 6_1:-28665861 | Msa0881480:CDS |
| TAATGCATTATGCAACTAAA+TGG | 0.300901 | 6_1:-28667462 | Msa0881480:CDS |
| TTTCATGCACTTTCCTTCTT+AGG | 0.307187 | 6_1:-28667213 | Msa0881480:CDS |
| CTGTTCTGTTCTGGAGCTGC+TGG | 0.323542 | 6_1:+28665689 | None:intergenic |
| GGTAGCGGTAGTTGGATTAA+AGG | 0.337161 | 6_1:-28667361 | Msa0881480:CDS |
| GAGTGTGAAAGCTAAGTATT+TGG | 0.342226 | 6_1:-28665879 | Msa0881480:CDS |
| GTAGTAGTGGTAGCGGTAGT+TGG | 0.346625 | 6_1:-28667369 | Msa0881480:CDS |
| AGCTATTGATTCCTATCTTA+AGG | 0.367444 | 6_1:-28666789 | Msa0881480:intron |
| CCTTCTTAGGCTTCTGAGAA+TGG | 0.374018 | 6_1:-28667200 | Msa0881480:CDS |
| AAATGAAAGGCTTCCATTAA+GGG | 0.389974 | 6_1:-28666098 | Msa0881480:CDS |
| TCACAGGTTCTAGCTGATTC+AGG | 0.390652 | 6_1:+28666827 | None:intergenic |
| TTCTGAGAAACATATGGGAT+TGG | 0.397986 | 6_1:-28666966 | Msa0881480:CDS |
| GCAAGTCCTATTTGCAGAAC+AGG | 0.399215 | 6_1:-28666068 | Msa0881480:CDS |
| TTGAAGATGTTTCAATCCTT+AGG | 0.401499 | 6_1:-28667558 | Msa0881480:CDS |
| TCTGAGAAACATATGGGATT+GGG | 0.407788 | 6_1:-28666965 | Msa0881480:CDS |
| CATATATGAATCACGCGAAC+CGG | 0.412776 | 6_1:-28668037 | Msa0881480:CDS |
| TGAGTTTATTAGATTTGGAT+TGG | 0.415940 | 6_1:+28668960 | None:intergenic |
| GGAAGTAATTACCTTAAGAT+AGG | 0.421004 | 6_1:+28666778 | None:intergenic |
| ATATCATTATTATTCCATCT+TGG | 0.423799 | 6_1:+28667631 | None:intergenic |
| GATTCAACATCTTTCAAAGA+AGG | 0.425349 | 6_1:+28666019 | None:intergenic |
| TGTTACAGGCTGTGATGAAA+TGG | 0.431885 | 6_1:+28668895 | None:intergenic |
| CTTTCATGCTCAGAAAGTGT+TGG | 0.432520 | 6_1:+28666187 | None:intergenic |
| TAAATAAGTTGAGTGAGAAT+AGG | 0.435374 | 6_1:+28668781 | None:intergenic |
| TTTCCACTTCGAGATATAAG+AGG | 0.442402 | 6_1:+28668072 | None:intergenic |
| TTCTTCAAAGAGGTCACTCT+TGG | 0.443338 | 6_1:-28668586 | Msa0881480:intron |
| AACATCTTTCAAAGAAGGGT+TGG | 0.446054 | 6_1:+28666024 | None:intergenic |
| GGTTACTGAATTAGAGAAAA+GGG | 0.454667 | 6_1:-28667149 | Msa0881480:CDS |
| ATAACTATCTTATTCACATC+CGG | 0.457064 | 6_1:+28668018 | None:intergenic |
| AGGCATAAAGACACTGAAAC+TGG | 0.458972 | 6_1:-28669028 | Msa0881480:five_prime_UTR |
| AAAGCTTGTGCTAATCCAAA+AGG | 0.459789 | 6_1:-28667700 | Msa0881480:CDS |
| ATTGCTGTTGATTTAACAGC+AGG | 0.465524 | 6_1:-28667937 | Msa0881480:CDS |
| ATCAACTAGTTCCTCCTGAT+TGG | 0.465695 | 6_1:-28667585 | Msa0881480:CDS |
| GAAGCGACTCTGCCGCGTAA+TGG | 0.466966 | 6_1:-28666164 | Msa0881480:CDS |
| TCAACTGCAAGACACAAGTA+TGG | 0.473817 | 6_1:-28668656 | Msa0881480:CDS |
| ATTCAACATCTTTCAAAGAA+GGG | 0.475157 | 6_1:+28666020 | None:intergenic |
| AACTAGTTCCTCCTGATTGG+TGG | 0.478674 | 6_1:-28667582 | Msa0881480:CDS |
| AGCTAACTTCCACTTGCATA+AGG | 0.482491 | 6_1:-28668390 | Msa0881480:intron |
| ACATCTTCAAACCACCAATC+AGG | 0.482701 | 6_1:+28667571 | None:intergenic |
| GAAGAAACACATGGAATGGT+TGG | 0.485434 | 6_1:+28668803 | None:intergenic |
| TTACAGAGGTTTCAAGAGAC+AGG | 0.493241 | 6_1:-28666892 | Msa0881480:CDS |
| ATGACAGAAGATTTAGAAGA+AGG | 0.494776 | 6_1:-28667874 | Msa0881480:CDS |
| TGGTTACTGAATTAGAGAAA+AGG | 0.496556 | 6_1:-28667150 | Msa0881480:CDS |
| TGATGATGTTCTTCCTGTGT+AGG | 0.497579 | 6_1:+28667666 | None:intergenic |
| TGTAACCATTGGTTGAGTAA+AGG | 0.498751 | 6_1:+28665997 | None:intergenic |
| TCAGCTAGAACCTGTGATGA+TGG | 0.501666 | 6_1:-28666821 | Msa0881480:CDS |
| TATGTGTAACTGTATTAGTA+AGG | 0.501677 | 6_1:+28668999 | None:intergenic |
| GGAACTAGTTGATTCCTACT+TGG | 0.503593 | 6_1:+28667595 | None:intergenic |
| CATACTTCAGCTTGGAGTAG+TGG | 0.506325 | 6_1:-28665797 | Msa0881480:CDS |
| TCTAATTCAGTAACCAATGC+AGG | 0.508323 | 6_1:+28667157 | None:intergenic |
| GGATGTGAATAAGATAGTTA+TGG | 0.510860 | 6_1:-28668016 | Msa0881480:CDS |
| GTTAAAGGTTGCACCTGCAT+TGG | 0.512074 | 6_1:-28667170 | Msa0881480:CDS |
| AACTAAATGGCTACAAGGGT+TGG | 0.513326 | 6_1:-28667449 | Msa0881480:CDS |
| AATAGTAATAGTAGTAGTAG+TGG | 0.515974 | 6_1:-28667382 | Msa0881480:CDS |
| AGCAGAAGCATACTTCAGCT+TGG | 0.516992 | 6_1:-28665805 | Msa0881480:CDS |
| AATAGTAGTAGTAGTGGTAG+CGG | 0.517826 | 6_1:-28667376 | Msa0881480:CDS |
| AGTTGGATTAAAGGCGGCGG+TGG | 0.518651 | 6_1:-28667352 | Msa0881480:CDS |
| GTCTCTCCTTTATTATAACA+AGG | 0.523236 | 6_1:+28667082 | None:intergenic |
| CTTCAGCTTGGAGTAGTGGT+TGG | 0.523301 | 6_1:-28665793 | Msa0881480:CDS |
| TTCGATGAAGCGAGCAATTG+TGG | 0.530246 | 6_1:-28667406 | Msa0881480:CDS |
| TGATATCCCTGGTGGATTTG+AGG | 0.532058 | 6_1:-28667992 | Msa0881480:CDS |
| TAACAAAGTGATCAATCCTA+AGG | 0.539725 | 6_1:+28667542 | None:intergenic |
| CTTGCAGCCAAATTCTGCTA+TGG | 0.542630 | 6_1:-28667961 | Msa0881480:CDS |
| CAACACTTTCTGAGCATGAA+AGG | 0.546369 | 6_1:-28666186 | Msa0881480:CDS |
| CCATTCTCAGAAGCCTAAGA+AGG | 0.546533 | 6_1:+28667200 | None:intergenic |
| TATGCAACTAAATGGCTACA+AGG | 0.547334 | 6_1:-28667454 | Msa0881480:CDS |
| GGACTTCACATGATTGTAGC+AGG | 0.547821 | 6_1:-28667331 | Msa0881480:CDS |
| ACTGAATTAGAGAAAAGGGT+TGG | 0.548384 | 6_1:-28667145 | Msa0881480:CDS |
| TCAGATTCCCACATGTTGGA+TGG | 0.549036 | 6_1:+28668686 | None:intergenic |
| TCTATAAAGTCCATCATCAC+AGG | 0.549509 | 6_1:+28666811 | None:intergenic |
| CAACACACTAAAGTTTGAGC+TGG | 0.551730 | 6_1:-28665903 | Msa0881480:CDS |
| CATCCTTCTTGGAATGATTG+TGG | 0.555236 | 6_1:+28665947 | None:intergenic |
| AGATAGCTACCTTATGCAAG+TGG | 0.556587 | 6_1:+28668381 | None:intergenic |
| ATTTGAAGATTCTCTGACCA+AGG | 0.556867 | 6_1:+28667754 | None:intergenic |
| ACTGAAGGATTTCTTCAAAG+AGG | 0.557934 | 6_1:-28668596 | Msa0881480:CDS |
| CCTTAATGCTAAAGCAAGAG+TGG | 0.561105 | 6_1:-28666936 | Msa0881480:CDS |
| CACAATCATTCCAAGAAGGA+TGG | 0.563573 | 6_1:-28665946 | Msa0881480:CDS |
| ATAGGAAGAAACACATGGAA+TGG | 0.563622 | 6_1:+28668799 | None:intergenic |
| GCTGCTGGAATATTACTTTG+AGG | 0.565988 | 6_1:+28665704 | None:intergenic |
| AAGCTTGTGCTAATCCAAAA+GGG | 0.570071 | 6_1:-28667699 | Msa0881480:CDS |
| ATTTGAACAAGAAAATCACT+TGG | 0.572128 | 6_1:+28668419 | None:intergenic |
| ACTCTCAGATTCCCACATGT+TGG | 0.572140 | 6_1:+28668682 | None:intergenic |
| TGAATCCTTTACTCAACCAA+TGG | 0.578454 | 6_1:-28666002 | Msa0881480:CDS |
| GTTACAGGCTGTGATGAAAT+GGG | 0.583692 | 6_1:+28668896 | None:intergenic |
| AAACATGGTGTCAAGACTGA+AGG | 0.585042 | 6_1:-28668611 | Msa0881480:CDS |
| GCAAGACACAAGTATGGTGA+TGG | 0.587211 | 6_1:-28668650 | Msa0881480:CDS |
| ATAGTTATGGATGATATCCC+TGG | 0.588860 | 6_1:-28668003 | Msa0881480:CDS |
| GATGCAGCGAGTCTATAGCT+TGG | 0.589137 | 6_1:-28667723 | Msa0881480:CDS |
| TCAAATGCCTCAAATCCACC+AGG | 0.589531 | 6_1:+28667985 | None:intergenic |
| TATCCTCTTATATCTCGAAG+TGG | 0.591595 | 6_1:-28668075 | Msa0881480:CDS |
| TGAAAATGAAAAGACATGTA+TGG | 0.594971 | 6_1:-28669053 | Msa0881480:five_prime_UTR |
| ATGCTAAAGCAAGAGTGGCA+AGG | 0.595719 | 6_1:-28666931 | Msa0881480:CDS |
| CATGAAACAGTATCTTTCTG+AGG | 0.597213 | 6_1:+28667229 | None:intergenic |
| TGCATGCTGCACAAAATGAA+AGG | 0.608887 | 6_1:-28666111 | Msa0881480:CDS |
| GGGATAAAATGGTCCTACAC+AGG | 0.610206 | 6_1:-28667679 | Msa0881480:CDS |
| TGAAAGATACAAGTCCAAGT+AGG | 0.614508 | 6_1:-28667609 | Msa0881480:CDS |
| TGTTGACAGTTATCTTACAG+AGG | 0.625756 | 6_1:-28666906 | Msa0881480:CDS |
| ATGAAAAGACATGTATGGTG+AGG | 0.631369 | 6_1:-28669048 | Msa0881480:five_prime_UTR |
| GAAACAGTATCTTTCTGAGG+AGG | 0.634508 | 6_1:+28667232 | None:intergenic |
| ATGCAACTAAATGGCTACAA+GGG | 0.636403 | 6_1:-28667453 | Msa0881480:CDS |
| ACACCACAATCATTCCAAGA+AGG | 0.638741 | 6_1:-28665950 | Msa0881480:CDS |
| TTGCTGTTGATTTAACAGCA+GGG | 0.649818 | 6_1:-28667936 | Msa0881480:CDS |
| GTCTTCAAGCTAAAGAACAA+AGG | 0.650300 | 6_1:-28667285 | Msa0881480:CDS |
| CTTCACATGATTGTAGCAGG+TGG | 0.651151 | 6_1:-28667328 | Msa0881480:CDS |
| GCTGTGAGAAGCTTTCACCT+TGG | 0.658908 | 6_1:-28667771 | Msa0881480:CDS |
| TCTTCAAACCACCAATCAGG+AGG | 0.664130 | 6_1:+28667574 | None:intergenic |
| ATTCTCACTTCAAACAAACA+TGG | 0.669333 | 6_1:-28668626 | Msa0881480:CDS |
| TGAGAATAGGAAGAAACACA+TGG | 0.672730 | 6_1:+28668794 | None:intergenic |
| GTTATGGATGATATCCCTGG+TGG | 0.677226 | 6_1:-28668000 | Msa0881480:CDS |
| ATGATGTTGATCTTGTTATG+CGG | 0.690885 | 6_1:-28667051 | Msa0881480:CDS |
| GTTTCTGGCAATCCATTACG+CGG | 0.691677 | 6_1:+28666152 | None:intergenic |
| GGTAGTTGGATTAAAGGCGG+CGG | 0.693718 | 6_1:-28667355 | Msa0881480:CDS |
| AGCGGTAGTTGGATTAAAGG+CGG | 0.709972 | 6_1:-28667358 | Msa0881480:CDS |
| CAAATGCCTCAAATCCACCA+GGG | 0.743591 | 6_1:+28667986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTATCTTAAAAAATTGT+CGG | + | chr6_1:28665650-28665669 | None:intergenic | 15.0% |
| !!! | AGAATCTAGTATTTTTTTAA+TGG | - | chr6_1:28665976-28665995 | Msa0881480:CDS | 15.0% |
| !!! | TTAATTCCTTGTTATAATAA+AGG | - | chr6_1:28667394-28667413 | Msa0881480:CDS | 15.0% |
| !!! | ATGTTTTATCTTATTTTAAG+TGG | - | chr6_1:28667805-28667824 | Msa0881480:CDS | 15.0% |
| !! | TTCAAAATAATTCTTGAAAT+TGG | - | chr6_1:28668043-28668062 | Msa0881480:CDS | 15.0% |
| !! | AGTTATGAGTTTATTAGATT+TGG | + | chr6_1:28665530-28665549 | None:intergenic | 20.0% |
| !! | AACAAAGAACAAAAAATTGT+TGG | + | chr6_1:28665616-28665635 | None:intergenic | 20.0% |
| !!! | TCACTCAACTTATTTATTTT+TGG | - | chr6_1:28665708-28665727 | Msa0881480:CDS | 20.0% |
| !!! | ATTCTTAAAAGCATTTTCAA+AGG | + | chr6_1:28665961-28665980 | None:intergenic | 20.0% |
| !! | ACCTATGAGTTTATAATTTA+TGG | - | chr6_1:28666164-28666183 | Msa0881480:CDS | 20.0% |
| !! | TCCATAAATTATAAACTCAT+AGG | + | chr6_1:28666168-28666187 | None:intergenic | 20.0% |
| !!! | ACTTAAATATTCGTTTTTGT+AGG | - | chr6_1:28666227-28666246 | Msa0881480:intron | 20.0% |
| !!! | AAGTTGAACAAAATTTTGTA+CGG | - | chr6_1:28666275-28666294 | Msa0881480:intron | 20.0% |
| !!! | TTTTTATACTAAGAGAGATT+AGG | - | chr6_1:28666321-28666340 | Msa0881480:intron | 20.0% |
| !! | ATATCATTATTATTCCATCT+TGG | + | chr6_1:28666854-28666873 | None:intergenic | 20.0% |
| !!! | TTACTTATTTACCTTTTCAA+TGG | - | chr6_1:28667739-28667758 | Msa0881480:CDS | 20.0% |
| !!! | TCAATTCAAAGACTATTTTA+GGG | - | chr6_1:28668150-28668169 | Msa0881480:intron | 20.0% |
| !!! | TTGAGATTTTCTTATCTTAT+AGG | + | chr6_1:28668858-28668877 | None:intergenic | 20.0% |
| ! | TGAAAATGAAAAGACATGTA+TGG | - | chr6_1:28665429-28665448 | Msa0881480:three_prime_UTR | 25.0% |
| ! | TATGTGTAACTGTATTAGTA+AGG | + | chr6_1:28665486-28665505 | None:intergenic | 25.0% |
| ! | TGAGTTTATTAGATTTGGAT+TGG | + | chr6_1:28665525-28665544 | None:intergenic | 25.0% |
| ! | AAAGAACAAAAAATTGTTGG+AGG | + | chr6_1:28665613-28665632 | None:intergenic | 25.0% |
| !! | TAAATAAGTTGAGTGAGAAT+AGG | + | chr6_1:28665704-28665723 | None:intergenic | 25.0% |
| !! | ACAAAATGTACTGTTCTAAA+AGG | + | chr6_1:28665760-28665779 | None:intergenic | 25.0% |
| ! | ATCTAGTATTATTCTAATGC+AGG | - | chr6_1:28666022-28666041 | Msa0881480:CDS | 25.0% |
| ! | ATTTGAACAAGAAAATCACT+TGG | + | chr6_1:28666066-28666085 | None:intergenic | 25.0% |
| !! | AGTGATTTTCTTGTTCAAAT+TGG | - | chr6_1:28666066-28666085 | Msa0881480:CDS | 25.0% |
| ! | AACACAAATAAATTCATCAG+TGG | + | chr6_1:28666363-28666382 | None:intergenic | 25.0% |
| ! | ATAACTATCTTATTCACATC+CGG | + | chr6_1:28666467-28666486 | None:intergenic | 25.0% |
| ! | ATTACTGCTATTAAGGTAAA+AGG | - | chr6_1:28666968-28666987 | Msa0881480:CDS | 25.0% |
| ! | TAATGCATTATGCAACTAAA+TGG | - | chr6_1:28667020-28667039 | Msa0881480:CDS | 25.0% |
| ! | AATAGTAATAGTAGTAGTAG+TGG | - | chr6_1:28667100-28667119 | Msa0881480:CDS | 25.0% |
| !!! | TCATTTTCTGAGAAACATAT+GGG | - | chr6_1:28667511-28667530 | Msa0881480:CDS | 25.0% |
| ! | AATAAGTAAATCCTAGAAAC+AGG | + | chr6_1:28667728-28667747 | None:intergenic | 25.0% |
| ! | ATGACATAAAACCATTGAAA+AGG | + | chr6_1:28667753-28667772 | None:intergenic | 25.0% |
| ! | AGTGGATAAATATACATAGA+AGG | - | chr6_1:28667823-28667842 | Msa0881480:CDS | 25.0% |
| !! | CTCAATTCAAAGACTATTTT+AGG | - | chr6_1:28668149-28668168 | Msa0881480:intron | 25.0% |
| !!! | GTATATTGATGATGAATGTA+TGG | - | chr6_1:28668210-28668229 | Msa0881480:intron | 25.0% |
| ! | ATTCAACATCTTTCAAAGAA+GGG | + | chr6_1:28668465-28668484 | None:intergenic | 25.0% |
| ATTCTCACTTCAAACAAACA+TGG | - | chr6_1:28665856-28665875 | Msa0881480:CDS | 30.0% | |
| !! | GCCTTTACTTTGCTTTTATA+CGG | - | chr6_1:28666204-28666223 | Msa0881480:intron | 30.0% |
| TCCGTATAAAAGCAAAGTAA+AGG | + | chr6_1:28666208-28666227 | None:intergenic | 30.0% | |
| GGATGTGAATAAGATAGTTA+TGG | - | chr6_1:28666466-28666485 | Msa0881480:intron | 30.0% | |
| ATGACAGAAGATTTAGAAGA+AGG | - | chr6_1:28666608-28666627 | Msa0881480:intron | 30.0% | |
| !!! | GCTATGTTGTTTTATCATCA+TGG | - | chr6_1:28666663-28666682 | Msa0881480:intron | 30.0% |
| CTAATCCAAAAGGGATAAAA+TGG | - | chr6_1:28666792-28666811 | Msa0881480:CDS | 30.0% | |
| ! | CAAAAATTTCAAGTCCAAGA+TGG | - | chr6_1:28666837-28666856 | Msa0881480:CDS | 30.0% |
| TTGAAGATGTTTCAATCCTT+AGG | - | chr6_1:28666924-28666943 | Msa0881480:CDS | 30.0% | |
| TAACAAAGTGATCAATCCTA+AGG | + | chr6_1:28666943-28666962 | None:intergenic | 30.0% | |
| TAGAGTCATTACTGCTATTA+AGG | - | chr6_1:28666961-28666980 | Msa0881480:CDS | 30.0% | |
| ! | GGAATGAGATTTGAGTTAAT+TGG | - | chr6_1:28666989-28667008 | Msa0881480:CDS | 30.0% |
| GAGAATGGCAATTATGTTAA+AGG | - | chr6_1:28667297-28667316 | Msa0881480:CDS | 30.0% | |
| TGGTTACTGAATTAGAGAAA+AGG | - | chr6_1:28667332-28667351 | Msa0881480:CDS | 30.0% | |
| GGTTACTGAATTAGAGAAAA+GGG | - | chr6_1:28667333-28667352 | Msa0881480:CDS | 30.0% | |
| GTCTCTCCTTTATTATAACA+AGG | + | chr6_1:28667403-28667422 | None:intergenic | 30.0% | |
| ! | ATGATGTTGATCTTGTTATG+CGG | - | chr6_1:28667431-28667450 | Msa0881480:CDS | 30.0% |
| ! | TCAGAAAATGACTGTCTTTT+CGG | + | chr6_1:28667502-28667521 | None:intergenic | 30.0% |
| !! | GTCATTTTCTGAGAAACATA+TGG | - | chr6_1:28667510-28667529 | Msa0881480:CDS | 30.0% |
| TCTTTCATTGACAAAGTTTC+AGG | - | chr6_1:28667615-28667634 | Msa0881480:CDS | 30.0% | |
| !! | AGCTATTGATTCCTATCTTA+AGG | - | chr6_1:28667693-28667712 | Msa0881480:CDS | 30.0% |
| GGAAGTAATTACCTTAAGAT+AGG | + | chr6_1:28667707-28667726 | None:intergenic | 30.0% | |
| !! | TTTGCAAAAGTACTGCAAAT+TGG | + | chr6_1:28667903-28667922 | None:intergenic | 30.0% |
| ! | TTTGCAGTACTTTTGCAAAT+TGG | - | chr6_1:28667904-28667923 | Msa0881480:CDS | 30.0% |
| GCACTTAATATCCATTAGTA+TGG | - | chr6_1:28667930-28667949 | Msa0881480:CDS | 30.0% | |
| TCTACTCATTTCCATACTAA+TGG | + | chr6_1:28667944-28667963 | None:intergenic | 30.0% | |
| CTACAATTTCAAAGGCAAAT+CGG | + | chr6_1:28667988-28668007 | None:intergenic | 30.0% | |
| TCAGAACTCTACAATTTCAA+AGG | + | chr6_1:28667996-28668015 | None:intergenic | 30.0% | |
| ! | ACGAAATTGACTGACTTAAA+AGG | - | chr6_1:28668107-28668126 | Msa0881480:intron | 30.0% |
| TGGTGATTCACTCAAATATT+AGG | - | chr6_1:28668180-28668199 | Msa0881480:intron | 30.0% | |
| TTCACTAGTAAGAAATCCAA+TGG | + | chr6_1:28668257-28668276 | None:intergenic | 30.0% | |
| TACTAGTGAAGTAAACTAAC+AGG | - | chr6_1:28668267-28668286 | Msa0881480:intron | 30.0% | |
| AAAATGAAAGGCTTCCATTA+AGG | - | chr6_1:28668383-28668402 | Msa0881480:intron | 30.0% | |
| AAATGAAAGGCTTCCATTAA+GGG | - | chr6_1:28668384-28668403 | Msa0881480:intron | 30.0% | |
| GATTCAACATCTTTCAAAGA+AGG | + | chr6_1:28668466-28668485 | None:intergenic | 30.0% | |
| ! | TTTGGAGCTTCAAAATGATA+TGG | - | chr6_1:28668621-28668640 | Msa0881480:CDS | 30.0% |
| ACAGAAAAACTACTAGAAGA+TGG | - | chr6_1:28668812-28668831 | Msa0881480:five_prime_UTR | 30.0% | |
| CTTGAAAAAAGTGATTGACT+TGG | + | chr6_1:28668909-28668928 | None:intergenic | 30.0% | |
| ATGAAAAGACATGTATGGTG+AGG | - | chr6_1:28665434-28665453 | Msa0881480:three_prime_UTR | 35.0% | |
| !! | AAAATTGTTGGAGGTGTTAC+AGG | + | chr6_1:28665604-28665623 | None:intergenic | 35.0% |
| ATAGGAAGAAACACATGGAA+TGG | + | chr6_1:28665686-28665705 | None:intergenic | 35.0% | |
| TGAGAATAGGAAGAAACACA+TGG | + | chr6_1:28665691-28665710 | None:intergenic | 35.0% | |
| !!! | AGTTTTTTCCATCCAACATG+TGG | - | chr6_1:28665788-28665807 | Msa0881480:CDS | 35.0% |
| !!! | GTTTTTTCCATCCAACATGT+GGG | - | chr6_1:28665789-28665808 | Msa0881480:CDS | 35.0% |
| ACTGAAGGATTTCTTCAAAG+AGG | - | chr6_1:28665886-28665905 | Msa0881480:CDS | 35.0% | |
| GAGGATACTTTCACAACAAA+GGG | + | chr6_1:28666394-28666413 | None:intergenic | 35.0% | |
| AGAGGATACTTTCACAACAA+AGG | + | chr6_1:28666395-28666414 | None:intergenic | 35.0% | |
| TATCCTCTTATATCTCGAAG+TGG | - | chr6_1:28666407-28666426 | Msa0881480:intron | 35.0% | |
| TTTCCACTTCGAGATATAAG+AGG | + | chr6_1:28666413-28666432 | None:intergenic | 35.0% | |
| ATAGTTATGGATGATATCCC+TGG | - | chr6_1:28666479-28666498 | Msa0881480:intron | 35.0% | |
| AGCAATTCCATAGCAGAATT+TGG | + | chr6_1:28666531-28666550 | None:intergenic | 35.0% | |
| !! | ATTGCTGTTGATTTAACAGC+AGG | - | chr6_1:28666545-28666564 | Msa0881480:intron | 35.0% |
| !! | TTGCTGTTGATTTAACAGCA+GGG | - | chr6_1:28666546-28666565 | Msa0881480:intron | 35.0% |
| ATTTGAAGATTCTCTGACCA+AGG | + | chr6_1:28666731-28666750 | None:intergenic | 35.0% | |
| AAAGCTTGTGCTAATCCAAA+AGG | - | chr6_1:28666782-28666801 | Msa0881480:intron | 35.0% | |
| AAGCTTGTGCTAATCCAAAA+GGG | - | chr6_1:28666783-28666802 | Msa0881480:intron | 35.0% | |
| ! | TAGGACCATTTTATCCCTTT+TGG | + | chr6_1:28666800-28666819 | None:intergenic | 35.0% |
| TGAAAGATACAAGTCCAAGT+AGG | - | chr6_1:28666873-28666892 | Msa0881480:CDS | 35.0% | |
| TATGCAACTAAATGGCTACA+AGG | - | chr6_1:28667028-28667047 | Msa0881480:CDS | 35.0% | |
| ATGCAACTAAATGGCTACAA+GGG | - | chr6_1:28667029-28667048 | Msa0881480:CDS | 35.0% | |
| AATAGTAGTAGTAGTGGTAG+CGG | - | chr6_1:28667106-28667125 | Msa0881480:CDS | 35.0% | |
| GTCTTCAAGCTAAAGAACAA+AGG | - | chr6_1:28667197-28667216 | Msa0881480:CDS | 35.0% | |
| CATGAAACAGTATCTTTCTG+AGG | + | chr6_1:28667256-28667275 | None:intergenic | 35.0% | |
| TTTCATGCACTTTCCTTCTT+AGG | - | chr6_1:28667269-28667288 | Msa0881480:CDS | 35.0% | |
| TCTAATTCAGTAACCAATGC+AGG | + | chr6_1:28667328-28667347 | None:intergenic | 35.0% | |
| ACTGAATTAGAGAAAAGGGT+TGG | - | chr6_1:28667337-28667356 | Msa0881480:CDS | 35.0% | |
| ! | TTCTGAGAAACATATGGGAT+TGG | - | chr6_1:28667516-28667535 | Msa0881480:CDS | 35.0% |
| TCTGAGAAACATATGGGATT+GGG | - | chr6_1:28667517-28667536 | Msa0881480:CDS | 35.0% | |
| TGTTGACAGTTATCTTACAG+AGG | - | chr6_1:28667576-28667595 | Msa0881480:CDS | 35.0% | |
| TCTATAAAGTCCATCATCAC+AGG | + | chr6_1:28667674-28667693 | None:intergenic | 35.0% | |
| ! | GGTAATTACTTCCTGTTTCT+AGG | - | chr6_1:28667714-28667733 | Msa0881480:CDS | 35.0% |
| ! | GTCATCTAGAGTTACACATT+TGG | - | chr6_1:28667768-28667787 | Msa0881480:CDS | 35.0% |
| CTAGAGTTACACATTTGGTT+TGG | - | chr6_1:28667773-28667792 | Msa0881480:CDS | 35.0% | |
| CTGACTTAAAAGGAATAACG+TGG | - | chr6_1:28668117-28668136 | Msa0881480:intron | 35.0% | |
| !! | GACTATTTTAGGGACAACTT+TGG | - | chr6_1:28668160-28668179 | Msa0881480:intron | 35.0% |
| CAGCTTAACTGTTATTCCAT+TGG | - | chr6_1:28668238-28668257 | Msa0881480:intron | 35.0% | |
| ATGCATCAATTGAGAGTTTC+TGG | + | chr6_1:28668348-28668367 | None:intergenic | 35.0% | |
| TCTTTACCTGTTCTGCAAAT+AGG | + | chr6_1:28668423-28668442 | None:intergenic | 35.0% | |
| AACATCTTTCAAAGAAGGGT+TGG | + | chr6_1:28668461-28668480 | None:intergenic | 35.0% | |
| TGAATCCTTTACTCAACCAA+TGG | - | chr6_1:28668480-28668499 | Msa0881480:intron | 35.0% | |
| ! | TGTAACCATTGGTTGAGTAA+AGG | + | chr6_1:28668488-28668507 | None:intergenic | 35.0% |
| !! | GTTTTTCGGTTTGTAACCAT+TGG | + | chr6_1:28668499-28668518 | None:intergenic | 35.0% |
| GAGTGTGAAAGCTAAGTATT+TGG | - | chr6_1:28668603-28668622 | Msa0881480:CDS | 35.0% | |
| ! | GTAGTTTTTCTGTTCTGTTC+TGG | + | chr6_1:28668805-28668824 | None:intergenic | 35.0% |
| AGGCATAAAGACACTGAAAC+TGG | - | chr6_1:28665454-28665473 | Msa0881480:three_prime_UTR | 40.0% | |
| GTTACAGGCTGTGATGAAAT+GGG | + | chr6_1:28665589-28665608 | None:intergenic | 40.0% | |
| TGTTACAGGCTGTGATGAAA+TGG | + | chr6_1:28665590-28665609 | None:intergenic | 40.0% | |
| GAAGAAACACATGGAATGGT+TGG | + | chr6_1:28665682-28665701 | None:intergenic | 40.0% | |
| TCAACTGCAAGACACAAGTA+TGG | - | chr6_1:28665826-28665845 | Msa0881480:CDS | 40.0% | |
| ! | AAACATGGTGTCAAGACTGA+AGG | - | chr6_1:28665871-28665890 | Msa0881480:CDS | 40.0% |
| TTCTTCAAAGAGGTCACTCT+TGG | - | chr6_1:28665896-28665915 | Msa0881480:CDS | 40.0% | |
| AGCTAACTTCCACTTGCATA+AGG | - | chr6_1:28666092-28666111 | Msa0881480:CDS | 40.0% | |
| AGATAGCTACCTTATGCAAG+TGG | + | chr6_1:28666104-28666123 | None:intergenic | 40.0% | |
| CATATATGAATCACGCGAAC+CGG | - | chr6_1:28666445-28666464 | Msa0881480:intron | 40.0% | |
| TTAACAGCAGGGAACATTTC+TGG | - | chr6_1:28666557-28666576 | Msa0881480:intron | 40.0% | |
| ! | TGATGATGTTCTTCCTGTGT+AGG | + | chr6_1:28666819-28666838 | None:intergenic | 40.0% |
| ! | GGAACTAGTTGATTCCTACT+TGG | + | chr6_1:28666890-28666909 | None:intergenic | 40.0% |
| ATCAACTAGTTCCTCCTGAT+TGG | - | chr6_1:28666897-28666916 | Msa0881480:CDS | 40.0% | |
| ACATCTTCAAACCACCAATC+AGG | + | chr6_1:28666914-28666933 | None:intergenic | 40.0% | |
| AACTAAATGGCTACAAGGGT+TGG | - | chr6_1:28667033-28667052 | Msa0881480:CDS | 40.0% | |
| ! | GAAACAGTATCTTTCTGAGG+AGG | + | chr6_1:28667253-28667272 | None:intergenic | 40.0% |
| CCACTCTTGCTTTAGCATTA+AGG | + | chr6_1:28667549-28667568 | None:intergenic | 40.0% | |
| CCTTAATGCTAAAGCAAGAG+TGG | - | chr6_1:28667546-28667565 | Msa0881480:CDS | 40.0% | |
| TTACAGAGGTTTCAAGAGAC+AGG | - | chr6_1:28667590-28667609 | Msa0881480:CDS | 40.0% | |
| !! | CACACTCGCATAATTTGCTA+CGG | - | chr6_1:28667852-28667871 | Msa0881480:CDS | 40.0% |
| TTCGCAAACCAATTCACGTT+TGG | + | chr6_1:28667878-28667897 | None:intergenic | 40.0% | |
| TAAAAGGAATAACGTGGTCG+AGG | - | chr6_1:28668123-28668142 | Msa0881480:intron | 40.0% | |
| ! | CTTTCATGCTCAGAAAGTGT+TGG | + | chr6_1:28668298-28668317 | None:intergenic | 40.0% |
| CAACACTTTCTGAGCATGAA+AGG | - | chr6_1:28668296-28668315 | Msa0881480:intron | 40.0% | |
| TGCATGCTGCACAAAATGAA+AGG | - | chr6_1:28668371-28668390 | Msa0881480:intron | 40.0% | |
| ACTTGCACAACTACCCTTAA+TGG | + | chr6_1:28668400-28668419 | None:intergenic | 40.0% | |
| AAACCGAAAAACACTTCTCG+AGG | - | chr6_1:28668507-28668526 | Msa0881480:intron | 40.0% | |
| ACACCACAATCATTCCAAGA+AGG | - | chr6_1:28668532-28668551 | Msa0881480:intron | 40.0% | |
| CATCCTTCTTGGAATGATTG+TGG | + | chr6_1:28668538-28668557 | None:intergenic | 40.0% | |
| CACAATCATTCCAAGAAGGA+TGG | - | chr6_1:28668536-28668555 | Msa0881480:intron | 40.0% | |
| CAACACACTAAAGTTTGAGC+TGG | - | chr6_1:28668579-28668598 | Msa0881480:intron | 40.0% | |
| GCTGCTGGAATATTACTTTG+AGG | + | chr6_1:28668781-28668800 | None:intergenic | 40.0% | |
| TCAGATTCCCACATGTTGGA+TGG | + | chr6_1:28665799-28665818 | None:intergenic | 45.0% | |
| ACTCTCAGATTCCCACATGT+TGG | + | chr6_1:28665803-28665822 | None:intergenic | 45.0% | |
| GCAAGACACAAGTATGGTGA+TGG | - | chr6_1:28665832-28665851 | Msa0881480:CDS | 45.0% | |
| GTTATGGATGATATCCCTGG+TGG | - | chr6_1:28666482-28666501 | Msa0881480:intron | 45.0% | |
| !! | TGATATCCCTGGTGGATTTG+AGG | - | chr6_1:28666490-28666509 | Msa0881480:intron | 45.0% |
| CAAATGCCTCAAATCCACCA+GGG | + | chr6_1:28666499-28666518 | None:intergenic | 45.0% | |
| TCAAATGCCTCAAATCCACC+AGG | + | chr6_1:28666500-28666519 | None:intergenic | 45.0% | |
| CTTGCAGCCAAATTCTGCTA+TGG | - | chr6_1:28666521-28666540 | Msa0881480:intron | 45.0% | |
| GGGATAAAATGGTCCTACAC+AGG | - | chr6_1:28666803-28666822 | Msa0881480:CDS | 45.0% | |
| AACTAGTTCCTCCTGATTGG+TGG | - | chr6_1:28666900-28666919 | Msa0881480:CDS | 45.0% | |
| TCTTCAAACCACCAATCAGG+AGG | + | chr6_1:28666911-28666930 | None:intergenic | 45.0% | |
| TTCGATGAAGCGAGCAATTG+TGG | - | chr6_1:28667076-28667095 | Msa0881480:CDS | 45.0% | |
| ! | GGTAGCGGTAGTTGGATTAA+AGG | - | chr6_1:28667121-28667140 | Msa0881480:CDS | 45.0% |
| AGCGGTAGTTGGATTAAAGG+CGG | - | chr6_1:28667124-28667143 | Msa0881480:CDS | 45.0% | |
| GGACTTCACATGATTGTAGC+AGG | - | chr6_1:28667151-28667170 | Msa0881480:CDS | 45.0% | |
| CTTCACATGATTGTAGCAGG+TGG | - | chr6_1:28667154-28667173 | Msa0881480:CDS | 45.0% | |
| CCATTCTCAGAAGCCTAAGA+AGG | + | chr6_1:28667285-28667304 | None:intergenic | 45.0% | |
| ! | CCTTCTTAGGCTTCTGAGAA+TGG | - | chr6_1:28667282-28667301 | Msa0881480:CDS | 45.0% |
| GTTAAAGGTTGCACCTGCAT+TGG | - | chr6_1:28667312-28667331 | Msa0881480:CDS | 45.0% | |
| ATGCTAAAGCAAGAGTGGCA+AGG | - | chr6_1:28667551-28667570 | Msa0881480:CDS | 45.0% | |
| ! | TCACAGGTTCTAGCTGATTC+AGG | + | chr6_1:28667658-28667677 | None:intergenic | 45.0% |
| TCAGCTAGAACCTGTGATGA+TGG | - | chr6_1:28667661-28667680 | Msa0881480:CDS | 45.0% | |
| !! | GTTTCTGGCAATCCATTACG+CGG | + | chr6_1:28668333-28668352 | None:intergenic | 45.0% |
| GCAAGTCCTATTTGCAGAAC+AGG | - | chr6_1:28668414-28668433 | Msa0881480:CDS | 45.0% | |
| !!! | TCGCCTCGAGAAGTGTTTTT+CGG | + | chr6_1:28668513-28668532 | None:intergenic | 45.0% |
| TAGCAGTTGTCCATCCTTCT+TGG | + | chr6_1:28668549-28668568 | None:intergenic | 45.0% | |
| ! | AGCAGAAGCATACTTCAGCT+TGG | - | chr6_1:28668677-28668696 | Msa0881480:CDS | 45.0% |
| CATACTTCAGCTTGGAGTAG+TGG | - | chr6_1:28668685-28668704 | Msa0881480:exon | 45.0% | |
| GCTGTGAGAAGCTTTCACCT+TGG | - | chr6_1:28666711-28666730 | Msa0881480:intron | 50.0% | |
| GATGCAGCGAGTCTATAGCT+TGG | - | chr6_1:28666759-28666778 | Msa0881480:intron | 50.0% | |
| !! | GTAGTAGTGGTAGCGGTAGT+TGG | - | chr6_1:28667113-28667132 | Msa0881480:CDS | 50.0% |
| GGTAGTTGGATTAAAGGCGG+CGG | - | chr6_1:28667127-28667146 | Msa0881480:CDS | 50.0% | |
| TGCTACGGCCAAACGTGAAT+TGG | - | chr6_1:28667867-28667886 | Msa0881480:CDS | 50.0% | |
| CTTCAGCTTGGAGTAGTGGT+TGG | - | chr6_1:28668689-28668708 | Msa0881480:exon | 50.0% | |
| AGTTGGATTAAAGGCGGCGG+TGG | - | chr6_1:28667130-28667149 | Msa0881480:CDS | 55.0% | |
| !! | CTGTTCTGTTCTGGAGCTGC+TGG | + | chr6_1:28668796-28668815 | None:intergenic | 55.0% |
| GAAGCGACTCTGCCGCGTAA+TGG | - | chr6_1:28668318-28668337 | Msa0881480:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 28665417 | 28669087 | 28665417 | ID=Msa0881480;Name=Msa0881480 |
| chr6_1 | mRNA | 28665417 | 28669087 | 28665417 | ID=Msa0881480-mRNA-1;Parent=Msa0881480;Name=Msa0881480-mRNA-1;_AED=0.14;_eAED=0.14;_QI=364|1|1|1|0.75|0.6|5|235|684 |
| chr6_1 | exon | 28665417 | 28666215 | 28665417 | ID=Msa0881480-mRNA-1:exon:7303;Parent=Msa0881480-mRNA-1 |
| chr6_1 | exon | 28666790 | 28668097 | 28666790 | ID=Msa0881480-mRNA-1:exon:7302;Parent=Msa0881480-mRNA-1 |
| chr6_1 | exon | 28668391 | 28668460 | 28668391 | ID=Msa0881480-mRNA-1:exon:7301;Parent=Msa0881480-mRNA-1 |
| chr6_1 | exon | 28668587 | 28668939 | 28668587 | ID=Msa0881480-mRNA-1:exon:7300;Parent=Msa0881480-mRNA-1 |
| chr6_1 | exon | 28668964 | 28669087 | 28668964 | ID=Msa0881480-mRNA-1:exon:7299;Parent=Msa0881480-mRNA-1 |
| chr6_1 | five_prime_UTR | 28668964 | 28669087 | 28668964 | ID=Msa0881480-mRNA-1:five_prime_utr;Parent=Msa0881480-mRNA-1 |
| chr6_1 | five_prime_UTR | 28668700 | 28668939 | 28668700 | ID=Msa0881480-mRNA-1:five_prime_utr;Parent=Msa0881480-mRNA-1 |
| chr6_1 | CDS | 28668587 | 28668699 | 28668587 | ID=Msa0881480-mRNA-1:cds;Parent=Msa0881480-mRNA-1 |
| chr6_1 | CDS | 28668391 | 28668460 | 28668391 | ID=Msa0881480-mRNA-1:cds;Parent=Msa0881480-mRNA-1 |
| chr6_1 | CDS | 28666790 | 28668097 | 28666790 | ID=Msa0881480-mRNA-1:cds;Parent=Msa0881480-mRNA-1 |
| chr6_1 | CDS | 28665652 | 28666215 | 28665652 | ID=Msa0881480-mRNA-1:cds;Parent=Msa0881480-mRNA-1 |
| chr6_1 | three_prime_UTR | 28665417 | 28665651 | 28665417 | ID=Msa0881480-mRNA-1:three_prime_utr;Parent=Msa0881480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
