Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208500 | XP_003608901.2 | 93.116 | 276 | 19 | 0 | 1 | 276 | 1 | 276 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208500 | G7JMN8 | 93.116 | 276 | 19 | 0 | 1 | 276 | 1 | 276 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1208500 | Msa1258800 | 0.949320 | 1.614007e-107 | -8.615850e-47 |
| Msa1208500 | Msa1330250 | 0.935409 | 8.881105e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208500 | MtrunA17_Chr4g0057971 | 92.780 | 277 | 19 | 1 | 1 | 276 | 1 | 277 | 0.0 | 527 |
| Msa1208500 | MtrunA17_Chr3g0099331 | 57.196 | 271 | 114 | 1 | 6 | 276 | 4 | 272 | 1.35e-118 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1208500 | AT5G63280.1 | 60.887 | 248 | 95 | 1 | 31 | 276 | 24 | 271 | 2.45e-107 | 312 |
| Msa1208500 | AT5G40710.1 | 54.902 | 255 | 114 | 1 | 21 | 275 | 18 | 271 | 4.14e-102 | 299 |
| Msa1208500 | AT5G40710.2 | 59.116 | 181 | 74 | 0 | 21 | 201 | 18 | 198 | 2.49e-77 | 235 |
Find 94 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAATGCCTAATGTTGATTT+TGG | 0.166762 | 8_1:-66623320 | Msa1208500:three_prime_UTR |
| GCTGATGGACCCTCACTTAT+AGG | 0.232839 | 8_1:+66625174 | None:intergenic |
| TACTTAATTAATAAACTTCT+TGG | 0.249458 | 8_1:-66627530 | Msa1208500:five_prime_UTR |
| CAGGTTTATGTGGAATCTTC+TGG | 0.250950 | 8_1:-66627158 | Msa1208500:CDS |
| CGGTTTCTTGCAGCAGCTGC+TGG | 0.266526 | 8_1:+66625313 | None:intergenic |
| TGTGATGCTCACTCCTGTTC+AGG | 0.266539 | 8_1:-66624978 | Msa1208500:CDS |
| ACACTTGCTTCTAGAGGATT+TGG | 0.284180 | 8_1:+66625339 | None:intergenic |
| CCCTGAGAATGATATGTTTA+GGG | 0.285937 | 8_1:-66626383 | Msa1208500:CDS |
| CTTGGTACTGTCCTGTATCT+TGG | 0.317927 | 8_1:-66627512 | Msa1208500:five_prime_UTR |
| TCTTCGTCGCCTCTCTTATA+CGG | 0.333768 | 8_1:-66627360 | Msa1208500:CDS |
| ACCCTGAGAATGATATGTTT+AGG | 0.338391 | 8_1:-66626384 | Msa1208500:CDS |
| TCTCTAGAGCAATGCACTTC+AGG | 0.339242 | 8_1:+66626743 | None:intergenic |
| AGGAGTGAGCATCACAAAAT+TGG | 0.344243 | 8_1:+66624985 | None:intergenic |
| GGGTTTGTGTTTCCCTGAAC+AGG | 0.363706 | 8_1:+66624965 | None:intergenic |
| TTGTACATTTAGCTATCAAT+TGG | 0.365066 | 8_1:-66623132 | Msa1208500:three_prime_UTR |
| ATTAATTAAGTAATAATTTG+TGG | 0.383090 | 8_1:+66627541 | None:intergenic |
| TTTGAGATTAGCCGTGAATA+AGG | 0.383996 | 8_1:-66627467 | Msa1208500:five_prime_UTR |
| TCTTTATTTATTTGATGAAA+AGG | 0.392404 | 8_1:-66624423 | Msa1208500:intron |
| CTTTGTCTTCCATCCAGCTC+TGG | 0.423212 | 8_1:+66624283 | None:intergenic |
| CCAAGGAAGTTTCTTTCGCC+TGG | 0.424245 | 8_1:-66624488 | Msa1208500:CDS |
| TCCCTAAACATATCATTCTC+AGG | 0.425069 | 8_1:+66626382 | None:intergenic |
| AAATGCTTCGCTGATTTATG+TGG | 0.425702 | 8_1:-66625391 | Msa1208500:CDS |
| TTATAGTAGGAATCTTAAAC+AGG | 0.430837 | 8_1:-66626780 | Msa1208500:intron |
| CCATCAGCAAGCCGTCTTCA+TGG | 0.441147 | 8_1:-66625159 | Msa1208500:intron |
| AGATCAATGCTCCGGCGGCC+AGG | 0.444945 | 8_1:+66624470 | None:intergenic |
| GTGATGCTCACTCCTGTTCA+GGG | 0.446768 | 8_1:-66624977 | Msa1208500:CDS |
| TTCACACCCTTCACTACCTC+AGG | 0.450533 | 8_1:+66623181 | None:intergenic |
| GTGACTGTGAGAATGGTTAA+TGG | 0.454339 | 8_1:+66623075 | None:intergenic |
| AAGCCATCATGATTGCTGTT+TGG | 0.455233 | 8_1:-66624263 | Msa1208500:intron |
| ACTTAAAATATTAAAATAGA+AGG | 0.458842 | 8_1:-66622955 | Msa1208500:three_prime_UTR |
| TACCTTGCCTCCTCTAGAGA+AGG | 0.465652 | 8_1:+66624944 | None:intergenic |
| CAGTCATCATCTATGATGAA+TGG | 0.466304 | 8_1:-66623362 | Msa1208500:three_prime_UTR |
| TGTACATTTAGCTATCAATT+GGG | 0.467415 | 8_1:-66623131 | Msa1208500:three_prime_UTR |
| AAGTAATTCGACCAAGATAC+AGG | 0.474640 | 8_1:+66627501 | None:intergenic |
| ATGCAGAGAGAATCTACTTC+GGG | 0.477536 | 8_1:+66623291 | None:intergenic |
| GAAGACACGAATTGCTGAAA+AGG | 0.480571 | 8_1:+66627378 | None:intergenic |
| ATTGCTCTAGAGAGAGAAGC+AGG | 0.482407 | 8_1:-66626733 | Msa1208500:CDS |
| AGTTTCTTTCGCCTGGCCGC+CGG | 0.484275 | 8_1:-66624481 | Msa1208500:CDS |
| ATGAATGGGTTTACAAAAGT+GGG | 0.484319 | 8_1:-66623347 | Msa1208500:three_prime_UTR |
| TACATCAGTGACTGTGAGAA+TGG | 0.493325 | 8_1:+66623068 | None:intergenic |
| AATGTTGCTTCAGGTTTATG+TGG | 0.496176 | 8_1:-66627168 | Msa1208500:intron |
| GATGAATGGGTTTACAAAAG+TGG | 0.496917 | 8_1:-66623348 | Msa1208500:three_prime_UTR |
| AGTCACTGATGTAAGCTGTT+TGG | 0.498012 | 8_1:-66623058 | Msa1208500:three_prime_UTR |
| CTTCGTCGCATCTCCAGAGC+TGG | 0.498575 | 8_1:-66624296 | Msa1208500:CDS |
| AGTCATCATCTATGATGAAT+GGG | 0.499018 | 8_1:-66623361 | Msa1208500:three_prime_UTR |
| ACCTTGCCTCCTCTAGAGAA+GGG | 0.500327 | 8_1:+66624945 | None:intergenic |
| AAGTATTGAGAATAGAAGAA+TGG | 0.505075 | 8_1:+66627401 | None:intergenic |
| GAAAGTCCAAAATCAACATT+AGG | 0.507943 | 8_1:+66623314 | None:intergenic |
| CATACATGTTGGAATTACAT+TGG | 0.510321 | 8_1:-66623004 | Msa1208500:three_prime_UTR |
| CCAGGCGAAAGAAACTTCCT+TGG | 0.523878 | 8_1:+66624488 | None:intergenic |
| CACAAAGCATTCATACATGT+TGG | 0.524403 | 8_1:-66623015 | Msa1208500:three_prime_UTR |
| GTAGTATTTGACACCATTTG+TGG | 0.525738 | 8_1:-66626446 | Msa1208500:intron |
| GGTTGCTTCGAAAGTGATAG+AGG | 0.525753 | 8_1:-66626711 | Msa1208500:CDS |
| CCATGAAGACGGCTTGCTGA+TGG | 0.527181 | 8_1:+66625159 | None:intergenic |
| AATGCTTCGCTGATTTATGT+GGG | 0.533259 | 8_1:-66625390 | Msa1208500:CDS |
| ATGTGGAATCTTCTGGTGAA+AGG | 0.536305 | 8_1:-66627151 | Msa1208500:intron |
| TGGATTACACTTGCTTCTAG+AGG | 0.538171 | 8_1:+66625333 | None:intergenic |
| CTCTCTGCATGTCTGTGTCA+AGG | 0.545399 | 8_1:-66623278 | Msa1208500:three_prime_UTR |
| ATAACTGTGACCTTCTTCAT+CGG | 0.546667 | 8_1:+66627429 | None:intergenic |
| CACATTTCCTGAGGTAGTGA+AGG | 0.547550 | 8_1:-66623188 | Msa1208500:three_prime_UTR |
| TTTAATTGTGATCAGGGCCA+AGG | 0.550666 | 8_1:-66624505 | Msa1208500:intron |
| TTTATCTAGACAGAAATGAA+TGG | 0.558782 | 8_1:-66626342 | Msa1208500:CDS |
| GTCGCATCTCCAGAGCTGGA+TGG | 0.564944 | 8_1:-66624292 | Msa1208500:CDS |
| GTATCTTGGTCGAATTACTT+CGG | 0.566006 | 8_1:-66627498 | Msa1208500:five_prime_UTR |
| AGGAAATGTGTGTTAGACAT+TGG | 0.567455 | 8_1:+66623201 | None:intergenic |
| TAGCACTAAGATCAATGCTC+CGG | 0.569538 | 8_1:+66624462 | None:intergenic |
| AATAGAGTAACCGATGAAGA+AGG | 0.573511 | 8_1:-66627439 | Msa1208500:exon |
| ACCCTTCTCTAGAGGAGGCA+AGG | 0.573782 | 8_1:-66624946 | Msa1208500:intron |
| CCCTAAACATATCATTCTCA+GGG | 0.574589 | 8_1:+66626383 | None:intergenic |
| CATGCAGAGAGAATCTACTT+CGG | 0.589297 | 8_1:+66623290 | None:intergenic |
| AAGCAACCTCACATAGGTGG+CGG | 0.589933 | 8_1:+66625293 | None:intergenic |
| AAGGAAATCAAACTTCGCAT+TGG | 0.592555 | 8_1:-66623225 | Msa1208500:three_prime_UTR |
| TGCATGTCTGTGTCAAGGAA+AGG | 0.592977 | 8_1:-66623273 | Msa1208500:three_prime_UTR |
| CACAAACCCTTCTCTAGAGG+AGG | 0.602598 | 8_1:-66624951 | Msa1208500:CDS |
| GAAGTATTATGAGTGCATGA+AGG | 0.605899 | 8_1:-66623244 | Msa1208500:three_prime_UTR |
| ACCTGGTTTCCGTATAAGAG+AGG | 0.612721 | 8_1:+66627351 | None:intergenic |
| AAATTAAAGCAACCTCACAT+AGG | 0.622173 | 8_1:+66625287 | None:intergenic |
| GCCTCTCTTATACGGAAACC+AGG | 0.623097 | 8_1:-66627352 | Msa1208500:intron |
| TTAATTTGAATACAGAGTCA+CGG | 0.624981 | 8_1:-66625415 | Msa1208500:intron |
| AAACACAAACCCTTCTCTAG+AGG | 0.625387 | 8_1:-66624954 | Msa1208500:CDS |
| TTACCAAACAGCAATCATGA+TGG | 0.638173 | 8_1:+66624260 | None:intergenic |
| ATATAAGTATACCATGAAGA+CGG | 0.640466 | 8_1:+66625148 | None:intergenic |
| ATGTATGAATGCTTTGTGCG+TGG | 0.643967 | 8_1:+66623020 | None:intergenic |
| TTAAAGCAACCTCACATAGG+TGG | 0.645783 | 8_1:+66625290 | None:intergenic |
| ACATTTCCTGAGGTAGTGAA+GGG | 0.649079 | 8_1:-66623187 | Msa1208500:three_prime_UTR |
| ATGCTTCGCTGATTTATGTG+GGG | 0.654468 | 8_1:-66625389 | Msa1208500:CDS |
| CACTAAGATCAATGCTCCGG+CGG | 0.665181 | 8_1:+66624465 | None:intergenic |
| GACAGAAATGAATGGCGATG+TGG | 0.677495 | 8_1:-66626334 | Msa1208500:CDS |
| TAAATAAAGAGATAGAACAC+AGG | 0.680639 | 8_1:+66624436 | None:intergenic |
| TTGCTCTAGAGAGAGAAGCA+GGG | 0.684514 | 8_1:-66626732 | Msa1208500:CDS |
| AAGAAACCGCCACCTATGTG+AGG | 0.686960 | 8_1:-66625299 | Msa1208500:intron |
| TGCAGAGAGAATCTACTTCG+GGG | 0.700354 | 8_1:+66623292 | None:intergenic |
| TGCTTCGAAAGTGATAGAGG+AGG | 0.706489 | 8_1:-66626708 | Msa1208500:intron |
| TGTCTAACACACATTTCCTG+AGG | 0.708645 | 8_1:-66623197 | Msa1208500:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAAGTAATAATTTG+TGG | + | chr8_1:66623002-66623021 | None:intergenic | 10.0% |
| !!! | ATTTTAGTAATTTTAACATT+GGG | - | chr8_1:66624976-66624995 | Msa1208500:CDS | 10.0% |
| !!! | TATACTTATATTTTCTTTTT+CGG | - | chr8_1:66625404-66625423 | Msa1208500:intron | 10.0% |
| !! | TTATAATTAAAATAAGCTTA+AGG | + | chr8_1:66626847-66626866 | None:intergenic | 10.0% |
| !! | ACTTAAAATATTAAAATAGA+AGG | - | chr8_1:66627585-66627604 | Msa1208500:five_prime_UTR | 10.0% |
| !! | TACTTAATTAATAAACTTCT+TGG | - | chr8_1:66623010-66623029 | Msa1208500:three_prime_UTR | 15.0% |
| !! | TTTCAAAAGAAAAAAAACAA+AGG | + | chr8_1:66623354-66623373 | None:intergenic | 15.0% |
| !!! | CATTTTAATTTCTAAATGTT+TGG | - | chr8_1:66623438-66623457 | Msa1208500:intron | 15.0% |
| !! | AAAATTATTACGATTGAAAA+AGG | + | chr8_1:66623868-66623887 | None:intergenic | 15.0% |
| !!! | TTTCAATCGTAATAATTTTA+TGG | - | chr8_1:66623869-66623888 | Msa1208500:intron | 15.0% |
| !! | AACATTTAGATGTAATAATT+AGG | - | chr8_1:66623990-66624009 | Msa1208500:intron | 15.0% |
| !! | AATACTACAAAAACATATAT+AGG | + | chr8_1:66624082-66624101 | None:intergenic | 15.0% |
| !! | TTGCAGAAATAAAAATTAAT+AGG | + | chr8_1:66624439-66624458 | None:intergenic | 15.0% |
| !!! | CATTTTAGTAATTTTAACAT+TGG | - | chr8_1:66624975-66624994 | Msa1208500:CDS | 15.0% |
| !! | ATTTGTTTCAAAAAAAGTAA+AGG | + | chr8_1:66625868-66625887 | None:intergenic | 15.0% |
| !! | TATTTATTTAATTGTGATCA+GGG | - | chr8_1:66626029-66626048 | Msa1208500:intron | 15.0% |
| !!! | TCTTTATTTATTTGATGAAA+AGG | - | chr8_1:66626117-66626136 | Msa1208500:intron | 15.0% |
| !!! | TCTTTTAAATTGTTATCTTT+TGG | - | chr8_1:66626311-66626330 | Msa1208500:CDS | 15.0% |
| !!! | CTTTAATTCAGCTTTTTAAT+AGG | + | chr8_1:66622971-66622990 | None:intergenic | 20.0% |
| !!! | TTCACTATTTGATTTTGAAT+TGG | + | chr8_1:66623232-66623251 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAAGGTTAACT+TGG | + | chr8_1:66623345-66623364 | None:intergenic | 20.0% |
| !!! | TTTCAAGTGACAAAAAAAAA+AGG | - | chr8_1:66623462-66623481 | Msa1208500:intron | 20.0% |
| !! | TTAATATTTACTACATTCCT+AGG | + | chr8_1:66624712-66624731 | None:intergenic | 20.0% |
| !! | ATAAAGAATGCATATAGATT+AGG | + | chr8_1:66625318-66625337 | None:intergenic | 20.0% |
| !! | ATAACGAAAACAAATTTAAC+CGG | + | chr8_1:66625638-66625657 | None:intergenic | 20.0% |
| !!! | AGGAAGCTTTTATAATTTTT+AGG | - | chr8_1:66625905-66625924 | Msa1208500:intron | 20.0% |
| !! | CTGATCACAATTAAATAAAT+AGG | + | chr8_1:66626030-66626049 | None:intergenic | 20.0% |
| !! | CTATTTATTTAATTGTGATC+AGG | - | chr8_1:66626028-66626047 | Msa1208500:intron | 20.0% |
| !! | AAATTGCCATTAATAAACAA+TGG | - | chr8_1:66626368-66626387 | Msa1208500:CDS | 20.0% |
| !! | ACAAATCCATTGTTTATTAA+TGG | + | chr8_1:66626377-66626396 | None:intergenic | 20.0% |
| !! | GTTAACTGAATTACTTAAAT+TGG | + | chr8_1:66626769-66626788 | None:intergenic | 20.0% |
| !! | TAGAAAAAATAAGCAATCTA+TGG | + | chr8_1:66626816-66626835 | None:intergenic | 20.0% |
| !!! | AGATTGCTTATTTTTTCTAA+TGG | - | chr8_1:66626817-66626836 | Msa1208500:intron | 20.0% |
| !! | CCTAATATTGATGAATAAAT+TGG | + | chr8_1:66627022-66627041 | None:intergenic | 20.0% |
| !! | CCAATTTATTCATCAATATT+AGG | - | chr8_1:66627019-66627038 | Msa1208500:intron | 20.0% |
| !!! | AAGTATTGAGAATAGAAGAA+TGG | + | chr8_1:66623142-66623161 | None:intergenic | 25.0% |
| ! | TTTGAATTGGAAATTCATTC+AGG | + | chr8_1:66623219-66623238 | None:intergenic | 25.0% |
| !!! | ATAAAAAAGAGTGCTATGTA+AGG | + | chr8_1:66623744-66623763 | None:intergenic | 25.0% |
| !!! | ATAGCACTCTTTTTTATAGT+AGG | - | chr8_1:66623747-66623766 | Msa1208500:intron | 25.0% |
| ! | TTATAGTAGGAATCTTAAAC+AGG | - | chr8_1:66623760-66623779 | Msa1208500:intron | 25.0% |
| !! | GTAATAATTTTATGGCATTG+AGG | - | chr8_1:66623877-66623896 | Msa1208500:intron | 25.0% |
| !! | TAGTTTTCTTTTTCCACAAA+TGG | + | chr8_1:66624110-66624129 | None:intergenic | 25.0% |
| ! | TTTATCTAGACAGAAATGAA+TGG | - | chr8_1:66624198-66624217 | Msa1208500:intron | 25.0% |
| !! | GATCAAGAAATTTTTCTTCA+CGG | + | chr8_1:66624250-66624269 | None:intergenic | 25.0% |
| !!! | TTGATCAACATTTTGATAAC+AGG | - | chr8_1:66624264-66624283 | Msa1208500:exon | 25.0% |
| !! | CTCTTATCTTATGTTTCTTT+TGG | - | chr8_1:66624341-66624360 | Msa1208500:intron | 25.0% |
| !! | TAAGAGTATAGAATTGCATT+TGG | + | chr8_1:66624464-66624483 | None:intergenic | 25.0% |
| ! | AAATGCAATTCTATACTCTT+AGG | - | chr8_1:66624463-66624482 | Msa1208500:CDS | 25.0% |
| ! | AATGCAATTCTATACTCTTA+GGG | - | chr8_1:66624464-66624483 | Msa1208500:CDS | 25.0% |
| ! | AAAAATCATTCCCAAGAATA+TGG | - | chr8_1:66624507-66624526 | Msa1208500:intron | 25.0% |
| ! | TTTGTAACTTCCATATTCTT+GGG | + | chr8_1:66624520-66624539 | None:intergenic | 25.0% |
| ! | AATATGGAAGTTACAAAGAA+GGG | - | chr8_1:66624523-66624542 | Msa1208500:intron | 25.0% |
| ! | TTTCTTGGGAATAAAAACAT+GGG | + | chr8_1:66624609-66624628 | None:intergenic | 25.0% |
| !! | TTTTCTTGGGAATAAAAACA+TGG | + | chr8_1:66624610-66624629 | None:intergenic | 25.0% |
| !!! | TGTTTTTATTCCCAAGAAAA+TGG | - | chr8_1:66624610-66624629 | Msa1208500:intron | 25.0% |
| ! | TAGGATTATTTGTAAACATG+GGG | + | chr8_1:66624693-66624712 | None:intergenic | 25.0% |
| ! | CTAGGATTATTTGTAAACAT+GGG | + | chr8_1:66624694-66624713 | None:intergenic | 25.0% |
| !! | TTAATTTGAATACAGAGTCA+CGG | - | chr8_1:66625125-66625144 | Msa1208500:intron | 25.0% |
| ! | ATATAAGTATACCATGAAGA+CGG | + | chr8_1:66625395-66625414 | None:intergenic | 25.0% |
| !! | ATTGATTAGTTCAGTAATAC+AGG | - | chr8_1:66625678-66625697 | Msa1208500:intron | 25.0% |
| !! | TTGATTAGTTCAGTAATACA+GGG | - | chr8_1:66625679-66625698 | Msa1208500:intron | 25.0% |
| !!! | TTACTTGAATGGTTGATTTT+TGG | - | chr8_1:66625794-66625813 | Msa1208500:intron | 25.0% |
| ! | TAAATAAAGAGATAGAACAC+AGG | + | chr8_1:66626107-66626126 | None:intergenic | 25.0% |
| ! | TATTGCTGAAAAATCTTGAT+TGG | + | chr8_1:66626173-66626192 | None:intergenic | 25.0% |
| !!! | TTATCTTTTGGTTATTTGCA+TGG | - | chr8_1:66626323-66626342 | Msa1208500:CDS | 25.0% |
| ! | GTACATGTAAAAGAAAACTT+AGG | + | chr8_1:66626462-66626481 | None:intergenic | 25.0% |
| ! | AGAAAATAAGACCAATAATG+AGG | + | chr8_1:66626521-66626540 | None:intergenic | 25.0% |
| ! | AAAATACACACAATAACCAA+TGG | + | chr8_1:66626638-66626657 | None:intergenic | 25.0% |
| ! | CATGGTAGAAGTAAAATTTA+AGG | + | chr8_1:66626878-66626897 | None:intergenic | 25.0% |
| ! | TGAGTAAAGTAAAAGTCATT+AGG | + | chr8_1:66627104-66627123 | None:intergenic | 25.0% |
| ! | TTGTACATTTAGCTATCAAT+TGG | - | chr8_1:66627408-66627427 | Msa1208500:CDS | 25.0% |
| ! | TGTACATTTAGCTATCAATT+GGG | - | chr8_1:66627409-66627428 | Msa1208500:CDS | 25.0% |
| ! | TCTATTTTCGACCTTATTCA+CGG | + | chr8_1:66623087-66623106 | None:intergenic | 30.0% |
| !!! | TTCTTTTGAAATGTTGCTTC+AGG | - | chr8_1:66623363-66623382 | Msa1208500:three_prime_UTR | 30.0% |
| TTTACAAAGTCGCTTATAAC+TGG | + | chr8_1:66623536-66623555 | None:intergenic | 30.0% | |
| !! | AATTTTATGGCATTGAGGTA+TGG | - | chr8_1:66623882-66623901 | Msa1208500:intron | 30.0% |
| !!! | TTATTTTAGTGCCTTGAATC+AGG | - | chr8_1:66623946-66623965 | Msa1208500:intron | 30.0% |
| TAATACCTGTAAGGTAATAC+TGG | + | chr8_1:66624386-66624405 | None:intergenic | 30.0% | |
| AGAAAACAGTAATACCTGTA+AGG | + | chr8_1:66624395-66624414 | None:intergenic | 30.0% | |
| ATGCAATTCTATACTCTTAG+GGG | - | chr8_1:66624465-66624484 | Msa1208500:CDS | 30.0% | |
| CTTTGTAACTTCCATATTCT+TGG | + | chr8_1:66624521-66624540 | None:intergenic | 30.0% | |
| GAATATGGAAGTTACAAAGA+AGG | - | chr8_1:66624522-66624541 | Msa1208500:intron | 30.0% | |
| TGGGAAGTTATTTAATTCCT+GGG | + | chr8_1:66624583-66624602 | None:intergenic | 30.0% | |
| ATGGGAAGTTATTTAATTCC+TGG | + | chr8_1:66624584-66624603 | None:intergenic | 30.0% | |
| GGAATAAAAACATGGGAAAT+GGG | + | chr8_1:66624602-66624621 | None:intergenic | 30.0% | |
| TTTATTCCCAAGAAAATGGA+CGG | - | chr8_1:66624614-66624633 | Msa1208500:intron | 30.0% | |
| GGAATAAAATATTCCCATGA+AGG | - | chr8_1:66624636-66624655 | Msa1208500:intron | 30.0% | |
| ATAAAATATTCCCATGAAGG+TGG | - | chr8_1:66624639-66624658 | Msa1208500:intron | 30.0% | |
| TAAAATATTCCCATGAAGGT+GGG | - | chr8_1:66624640-66624659 | Msa1208500:intron | 30.0% | |
| TTTGTAAACATGGGGAATAT+AGG | + | chr8_1:66624685-66624704 | None:intergenic | 30.0% | |
| CCTAGGATTATTTGTAAACA+TGG | + | chr8_1:66624695-66624714 | None:intergenic | 30.0% | |
| CCATGTTTACAAATAATCCT+AGG | - | chr8_1:66624692-66624711 | Msa1208500:intron | 30.0% | |
| AAAGTAAACTTATGAGAGAG+CGG | + | chr8_1:66624836-66624855 | None:intergenic | 30.0% | |
| !! | AGCATTGCACTTTTTATAAG+AGG | + | chr8_1:66624896-66624915 | None:intergenic | 30.0% |
| !! | AGTAATTTTAACATTGGGTG+TGG | - | chr8_1:66624981-66625000 | Msa1208500:CDS | 30.0% |
| TAAACTCAAAACAGACTTGT+TGG | - | chr8_1:66625010-66625029 | Msa1208500:intron | 30.0% | |
| AAATTAAAGCAACCTCACAT+AGG | + | chr8_1:66625256-66625275 | None:intergenic | 30.0% | |
| !! | AGTTGTTTTCCTATAAGTGA+GGG | - | chr8_1:66625357-66625376 | Msa1208500:CDS | 30.0% |
| AAAATGTAGTGACATCATTG+TGG | + | chr8_1:66625444-66625463 | None:intergenic | 30.0% | |
| ! | TTCTTATGTTGATTGTGCAT+TGG | - | chr8_1:66625516-66625535 | Msa1208500:intron | 30.0% |
| CCATTCAAGTAATGTCAATA+AGG | + | chr8_1:66625786-66625805 | None:intergenic | 30.0% | |
| CCTTATTGACATTACTTGAA+TGG | - | chr8_1:66625783-66625802 | Msa1208500:intron | 30.0% | |
| AGCAATATCTCAAAACTGTT+GGG | - | chr8_1:66626186-66626205 | Msa1208500:intron | 30.0% | |
| TGAAATGAAGAAAGAAGGAT+TGG | + | chr8_1:66626439-66626458 | None:intergenic | 30.0% | |
| TTAGGTGAAATGAAGAAAGA+AGG | + | chr8_1:66626444-66626463 | None:intergenic | 30.0% | |
| TACTTTCTATGCCTCATTAT+TGG | - | chr8_1:66626507-66626526 | Msa1208500:intron | 30.0% | |
| ATCAGAACTTTAATGTCTGT+CGG | + | chr8_1:66626601-66626620 | None:intergenic | 30.0% | |
| AATAAATTGGAGAACTGGTA+CGG | + | chr8_1:66627009-66627028 | None:intergenic | 30.0% | |
| TGATGAATAAATTGGAGAAC+TGG | + | chr8_1:66627014-66627033 | None:intergenic | 30.0% | |
| GTAAAGTAAAAGTCATTAGG+CGG | + | chr8_1:66627101-66627120 | None:intergenic | 30.0% | |
| AAAGAGTTACACATGATAAG+AGG | + | chr8_1:66627135-66627154 | None:intergenic | 30.0% | |
| ! | TGTAACTCTTTTACTTATGC+AGG | - | chr8_1:66627144-66627163 | Msa1208500:intron | 30.0% |
| AGTCATCATCTATGATGAAT+GGG | - | chr8_1:66627179-66627198 | Msa1208500:intron | 30.0% | |
| ! | ATGAATGGGTTTACAAAAGT+GGG | - | chr8_1:66627193-66627212 | Msa1208500:intron | 30.0% |
| !!! | GTAATGCCTAATGTTGATTT+TGG | - | chr8_1:66627220-66627239 | Msa1208500:intron | 30.0% |
| GAAAGTCCAAAATCAACATT+AGG | + | chr8_1:66627229-66627248 | None:intergenic | 30.0% | |
| CATACATGTTGGAATTACAT+TGG | - | chr8_1:66627536-66627555 | Msa1208500:five_prime_UTR | 30.0% | |
| AAGTAATTCGACCAAGATAC+AGG | + | chr8_1:66623042-66623061 | None:intergenic | 35.0% | |
| GTATCTTGGTCGAATTACTT+CGG | - | chr8_1:66623042-66623061 | Msa1208500:three_prime_UTR | 35.0% | |
| ! | TTTGAGATTAGCCGTGAATA+AGG | - | chr8_1:66623073-66623092 | Msa1208500:three_prime_UTR | 35.0% |
| AATAGAGTAACCGATGAAGA+AGG | - | chr8_1:66623101-66623120 | Msa1208500:three_prime_UTR | 35.0% | |
| ATAACTGTGACCTTCTTCAT+CGG | + | chr8_1:66623114-66623133 | None:intergenic | 35.0% | |
| ! | AAATTCATTCAGGTGTTACC+TGG | + | chr8_1:66623209-66623228 | None:intergenic | 35.0% |
| ! | AATGTTGCTTCAGGTTTATG+TGG | - | chr8_1:66623372-66623391 | Msa1208500:three_prime_UTR | 35.0% |
| AATCTTCTGGTGAAAGGTAA+TGG | - | chr8_1:66623395-66623414 | Msa1208500:intron | 35.0% | |
| !!! | TGTATGTTTGGTTCTGCTTT+TGG | + | chr8_1:66623625-66623644 | None:intergenic | 35.0% |
| ACAAAAGCTACGTGTATGTT+TGG | + | chr8_1:66623637-66623656 | None:intergenic | 35.0% | |
| GATAACGAAGAAGATTGCTT+CGG | + | chr8_1:66623689-66623708 | None:intergenic | 35.0% | |
| AATCATGTGAGACAAGCTAA+GGG | + | chr8_1:66623711-66623730 | None:intergenic | 35.0% | |
| TAATCATGTGAGACAAGCTA+AGG | + | chr8_1:66623712-66623731 | None:intergenic | 35.0% | |
| TAGACATATGTCCTGATTCA+AGG | + | chr8_1:66623960-66623979 | None:intergenic | 35.0% | |
| TTGAATCAGGACATATGTCT+AGG | - | chr8_1:66623959-66623978 | Msa1208500:intron | 35.0% | |
| GTAGTATTTGACACCATTTG+TGG | - | chr8_1:66624094-66624113 | Msa1208500:intron | 35.0% | |
| ACCCTGAGAATGATATGTTT+AGG | - | chr8_1:66624156-66624175 | Msa1208500:intron | 35.0% | |
| CCCTAAACATATCATTCTCA+GGG | + | chr8_1:66624160-66624179 | None:intergenic | 35.0% | |
| CCCTGAGAATGATATGTTTA+GGG | - | chr8_1:66624157-66624176 | Msa1208500:intron | 35.0% | |
| TCCCTAAACATATCATTCTC+AGG | + | chr8_1:66624161-66624180 | None:intergenic | 35.0% | |
| TGCAATTCTATACTCTTAGG+GGG | - | chr8_1:66624466-66624485 | Msa1208500:CDS | 35.0% | |
| ! | TGGGAATGATTTTTACAACC+AGG | + | chr8_1:66624501-66624520 | None:intergenic | 35.0% |
| !! | CCTAGCTTTGTAACAAACAT+AGG | + | chr8_1:66624551-66624570 | None:intergenic | 35.0% |
| ! | CCTATGTTTGTTACAAAGCT+AGG | - | chr8_1:66624548-66624567 | Msa1208500:intron | 35.0% |
| AAGCTAGGATATTAATTCCC+AGG | - | chr8_1:66624563-66624582 | Msa1208500:intron | 35.0% | |
| GGGAATAAAAACATGGGAAA+TGG | + | chr8_1:66624603-66624622 | None:intergenic | 35.0% | |
| TTATTCCCAAGAAAATGGAC+GGG | - | chr8_1:66624615-66624634 | Msa1208500:intron | 35.0% | |
| ! | TTATTCCCGTCCATTTTCTT+GGG | + | chr8_1:66624623-66624642 | None:intergenic | 35.0% |
| ! | TTTATTCCCGTCCATTTTCT+TGG | + | chr8_1:66624624-66624643 | None:intergenic | 35.0% |
| AAAATATTCCCATGAAGGTG+GGG | - | chr8_1:66624641-66624660 | Msa1208500:intron | 35.0% | |
| ! | ACTTGTTGGAAGCTTAAGTT+TGG | - | chr8_1:66625024-66625043 | Msa1208500:intron | 35.0% |
| CCATACGAGTAATGAAATTG+TGG | + | chr8_1:66625105-66625124 | None:intergenic | 35.0% | |
| CCACAATTTCATTACTCGTA+TGG | - | chr8_1:66625102-66625121 | Msa1208500:intron | 35.0% | |
| !! | AAATGCTTCGCTGATTTATG+TGG | - | chr8_1:66625149-66625168 | Msa1208500:intron | 35.0% |
| !! | AATGCTTCGCTGATTTATGT+GGG | - | chr8_1:66625150-66625169 | Msa1208500:intron | 35.0% |
| !! | CAGTTGTTTTCCTATAAGTG+AGG | - | chr8_1:66625356-66625375 | Msa1208500:CDS | 35.0% |
| ATTTAACCGGTGAGATAATC+AGG | + | chr8_1:66625625-66625644 | None:intergenic | 35.0% | |
| ! | TATCTGTGTTGTGAGGTTTT+AGG | - | chr8_1:66625726-66625745 | Msa1208500:intron | 35.0% |
| TCAACTTTGTGAATAGCACA+AGG | + | chr8_1:66625752-66625771 | None:intergenic | 35.0% | |
| !! | AATGTCTTTCCTTTTCTAGC+AGG | - | chr8_1:66625885-66625904 | Msa1208500:intron | 35.0% |
| TAAAAGCTTCCTGCTAGAAA+AGG | + | chr8_1:66625897-66625916 | None:intergenic | 35.0% | |
| !! | CCACAGTTTCTGAAGATTTT+GGG | - | chr8_1:66625971-66625990 | Msa1208500:intron | 35.0% |
| CAGCAATATCTCAAAACTGT+TGG | - | chr8_1:66626185-66626204 | Msa1208500:intron | 35.0% | |
| TTACCAAACAGCAATCATGA+TGG | + | chr8_1:66626283-66626302 | None:intergenic | 35.0% | |
| AGAAAGAAGGATTGGAAAAC+AGG | + | chr8_1:66626431-66626450 | None:intergenic | 35.0% | |
| GTACATTGTCCAAAGAGAAA+TGG | - | chr8_1:66626571-66626590 | Msa1208500:intron | 35.0% | |
| ! | TAAAGTTCTGATGTCGACTA+TGG | - | chr8_1:66626609-66626628 | Msa1208500:intron | 35.0% |
| AAGAGAGAGATTAGCATGTA+TGG | - | chr8_1:66626693-66626712 | Msa1208500:intron | 35.0% | |
| TGGTCACTCATTTGAGAATA+AGG | + | chr8_1:66626796-66626815 | None:intergenic | 35.0% | |
| ! | CTTCTACCATGCACATTTTA+TGG | - | chr8_1:66626887-66626906 | Msa1208500:intron | 35.0% |
| ATACCTCCATAAAATGTGCA+TGG | + | chr8_1:66626896-66626915 | None:intergenic | 35.0% | |
| AGACTACATGTATTCTCAAC+TGG | - | chr8_1:66626964-66626983 | Msa1208500:intron | 35.0% | |
| CAGTCATCATCTATGATGAA+TGG | - | chr8_1:66627178-66627197 | Msa1208500:intron | 35.0% | |
| ! | GATGAATGGGTTTACAAAAG+TGG | - | chr8_1:66627192-66627211 | Msa1208500:intron | 35.0% |
| ! | GAAGTATTATGAGTGCATGA+AGG | - | chr8_1:66627296-66627315 | Msa1208500:intron | 35.0% |
| AAGGAAATCAAACTTCGCAT+TGG | - | chr8_1:66627315-66627334 | Msa1208500:intron | 35.0% | |
| AGGAAATGTGTGTTAGACAT+TGG | + | chr8_1:66627342-66627361 | None:intergenic | 35.0% | |
| ! | CACAAAGCATTCATACATGT+TGG | - | chr8_1:66627525-66627544 | Msa1208500:five_prime_UTR | 35.0% |
| GAAGACACGAATTGCTGAAA+AGG | + | chr8_1:66623165-66623184 | None:intergenic | 40.0% | |
| CAGGTTTATGTGGAATCTTC+TGG | - | chr8_1:66623382-66623401 | Msa1208500:intron | 40.0% | |
| ATGTGGAATCTTCTGGTGAA+AGG | - | chr8_1:66623389-66623408 | Msa1208500:intron | 40.0% | |
| !! | TCTGGTGAAAGGTAATGGAA+TGG | - | chr8_1:66623400-66623419 | Msa1208500:intron | 40.0% |
| !!! | ATGTTTGGTTCTGCTTTTGG+AGG | + | chr8_1:66623622-66623641 | None:intergenic | 40.0% |
| ! | GAAAGTGATAGAGGAGGTAT+GGG | - | chr8_1:66623838-66623857 | Msa1208500:intron | 40.0% |
| ! | CACAGTTTTGCTCTCTAAAC+TGG | - | chr8_1:66624049-66624068 | Msa1208500:intron | 40.0% |
| TTGAGCCAGTATTACCTTAC+AGG | - | chr8_1:66624378-66624397 | Msa1208500:intron | 40.0% | |
| !! | AGTTTTATCCCCACCTTCAT+GGG | + | chr8_1:66624652-66624671 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCCACCTTCA+TGG | + | chr8_1:66624653-66624672 | None:intergenic | 40.0% |
| GTAAACATGGGGAATATAGG+TGG | + | chr8_1:66624682-66624701 | None:intergenic | 40.0% | |
| ATGGCATAGAGAGTTAGGAT+TGG | - | chr8_1:66624781-66624800 | Msa1208500:intron | 40.0% | |
| ! | ATAGAGAGTTAGGATTGGCA+GGG | - | chr8_1:66624786-66624805 | Msa1208500:intron | 40.0% |
| CAATTGTTTATTCCCACGTG+CGG | + | chr8_1:66624924-66624943 | None:intergenic | 40.0% | |
| !! | ATGCTTCGCTGATTTATGTG+GGG | - | chr8_1:66625151-66625170 | Msa1208500:intron | 40.0% |
| ! | ACACTTGCTTCTAGAGGATT+TGG | + | chr8_1:66625204-66625223 | None:intergenic | 40.0% |
| TGGATTACACTTGCTTCTAG+AGG | + | chr8_1:66625210-66625229 | None:intergenic | 40.0% | |
| TTAAAGCAACCTCACATAGG+TGG | + | chr8_1:66625253-66625272 | None:intergenic | 40.0% | |
| AGGAGTGAGCATCACAAAAT+TGG | + | chr8_1:66625558-66625577 | None:intergenic | 40.0% | |
| AAACACAAACCCTTCTCTAG+AGG | - | chr8_1:66625586-66625605 | Msa1208500:intron | 40.0% | |
| CAACACAGATACTCTATGAC+TGG | + | chr8_1:66625717-66625736 | None:intergenic | 40.0% | |
| ! | CATAGAGTATCTGTGTTGTG+AGG | - | chr8_1:66625719-66625738 | Msa1208500:intron | 40.0% |
| !! | GCCACAGTTTCTGAAGATTT+TGG | - | chr8_1:66625970-66625989 | Msa1208500:intron | 40.0% |
| CCCAAAATCTTCAGAAACTG+TGG | + | chr8_1:66625974-66625993 | None:intergenic | 40.0% | |
| TTTAATTGTGATCAGGGCCA+AGG | - | chr8_1:66626035-66626054 | Msa1208500:intron | 40.0% | |
| TAGCACTAAGATCAATGCTC+CGG | + | chr8_1:66626081-66626100 | None:intergenic | 40.0% | |
| ! | AAGCCATCATGATTGCTGTT+TGG | - | chr8_1:66626277-66626296 | Msa1208500:CDS | 40.0% |
| TGGTTATTTGCATGGCAGAA+TGG | - | chr8_1:66626331-66626350 | Msa1208500:CDS | 40.0% | |
| GGTTATTTGCATGGCAGAAT+GGG | - | chr8_1:66626332-66626351 | Msa1208500:CDS | 40.0% | |
| ! | ATGTCGACTATGGTATCCAT+TGG | - | chr8_1:66626619-66626638 | Msa1208500:intron | 40.0% |
| ! | CTACCATGCACATTTTATGG+AGG | - | chr8_1:66626890-66626909 | Msa1208500:intron | 40.0% |
| CTCAACTGGAATTTATGACC+AGG | - | chr8_1:66626978-66626997 | Msa1208500:intron | 40.0% | |
| ! | AGCATAACTTTGAGAGAGCA+GGG | + | chr8_1:66627078-66627097 | None:intergenic | 40.0% |
| ATGCAGAGAGAATCTACTTC+GGG | + | chr8_1:66627252-66627271 | None:intergenic | 40.0% | |
| CATGCAGAGAGAATCTACTT+CGG | + | chr8_1:66627253-66627272 | None:intergenic | 40.0% | |
| TGTCTAACACACATTTCCTG+AGG | - | chr8_1:66627343-66627362 | Msa1208500:intron | 40.0% | |
| ACATTTCCTGAGGTAGTGAA+GGG | - | chr8_1:66627353-66627372 | Msa1208500:CDS | 40.0% | |
| GTGACTGTGAGAATGGTTAA+TGG | + | chr8_1:66627468-66627487 | None:intergenic | 40.0% | |
| TACATCAGTGACTGTGAGAA+TGG | + | chr8_1:66627475-66627494 | None:intergenic | 40.0% | |
| AGTCACTGATGTAAGCTGTT+TGG | - | chr8_1:66627482-66627501 | Msa1208500:five_prime_UTR | 40.0% | |
| ATGTATGAATGCTTTGTGCG+TGG | + | chr8_1:66627523-66627542 | None:intergenic | 40.0% | |
| CTTGGTACTGTCCTGTATCT+TGG | - | chr8_1:66623028-66623047 | Msa1208500:three_prime_UTR | 45.0% | |
| TCTTCGTCGCCTCTCTTATA+CGG | - | chr8_1:66623180-66623199 | Msa1208500:three_prime_UTR | 45.0% | |
| ACCTGGTTTCCGTATAAGAG+AGG | + | chr8_1:66623192-66623211 | None:intergenic | 45.0% | |
| !!! | TTTGGTTCTGCTTTTGGAGG+AGG | + | chr8_1:66623619-66623638 | None:intergenic | 45.0% |
| !! | TCTCTAGAGCAATGCACTTC+AGG | + | chr8_1:66623800-66623819 | None:intergenic | 45.0% |
| !! | ATTGCTCTAGAGAGAGAAGC+AGG | - | chr8_1:66623807-66623826 | Msa1208500:intron | 45.0% |
| !! | TTGCTCTAGAGAGAGAAGCA+GGG | - | chr8_1:66623808-66623827 | Msa1208500:intron | 45.0% |
| GGTTGCTTCGAAAGTGATAG+AGG | - | chr8_1:66623829-66623848 | Msa1208500:intron | 45.0% | |
| TGCTTCGAAAGTGATAGAGG+AGG | - | chr8_1:66623832-66623851 | Msa1208500:intron | 45.0% | |
| CGAAAGTGATAGAGGAGGTA+TGG | - | chr8_1:66623837-66623856 | Msa1208500:intron | 45.0% | |
| GACAGAAATGAATGGCGATG+TGG | - | chr8_1:66624206-66624225 | Msa1208500:intron | 45.0% | |
| TATGTTACCTGCCTCTCTGA+TGG | - | chr8_1:66624762-66624781 | Msa1208500:intron | 45.0% | |
| AACTCTCTATGCCATCAGAG+AGG | + | chr8_1:66624776-66624795 | None:intergenic | 45.0% | |
| CTCTGATGGCATAGAGAGTT+AGG | - | chr8_1:66624776-66624795 | Msa1208500:intron | 45.0% | |
| ! | CATAGAGAGTTAGGATTGGC+AGG | - | chr8_1:66624785-66624804 | Msa1208500:intron | 45.0% |
| ! | CTTATGAGAGAGCGGATTCA+CGG | + | chr8_1:66624828-66624847 | None:intergenic | 45.0% |
| CGCACGTGGGAATAAACAAT+TGG | - | chr8_1:66624922-66624941 | Msa1208500:intron | 45.0% | |
| GTAAGGCCTGATTATCTCAC+CGG | - | chr8_1:66625616-66625635 | Msa1208500:intron | 45.0% | |
| ! | GCATAACTTTGAGAGAGCAG+GGG | + | chr8_1:66627077-66627096 | None:intergenic | 45.0% |
| ! | GAGCATAACTTTGAGAGAGC+AGG | + | chr8_1:66627079-66627098 | None:intergenic | 45.0% |
| TGCAGAGAGAATCTACTTCG+GGG | + | chr8_1:66627251-66627270 | None:intergenic | 45.0% | |
| TGCATGTCTGTGTCAAGGAA+AGG | - | chr8_1:66627267-66627286 | Msa1208500:intron | 45.0% | |
| CACATTTCCTGAGGTAGTGA+AGG | - | chr8_1:66627352-66627371 | Msa1208500:intron | 45.0% | |
| GCCTCTCTTATACGGAAACC+AGG | - | chr8_1:66623188-66623207 | Msa1208500:three_prime_UTR | 50.0% | |
| !! | CTTAGGGGGTGTTTGTTTCC+TGG | - | chr8_1:66624480-66624499 | Msa1208500:CDS | 50.0% |
| CAATGCTTCTTTCCGCACGT+GGG | - | chr8_1:66624909-66624928 | Msa1208500:intron | 50.0% | |
| AAGAAACCGCCACCTATGTG+AGG | - | chr8_1:66625241-66625260 | Msa1208500:intron | 50.0% | |
| AAGCAACCTCACATAGGTGG+CGG | + | chr8_1:66625250-66625269 | None:intergenic | 50.0% | |
| ! | GCTGATGGACCCTCACTTAT+AGG | + | chr8_1:66625369-66625388 | None:intergenic | 50.0% |
| TGTGATGCTCACTCCTGTTC+AGG | - | chr8_1:66625562-66625581 | Msa1208500:intron | 50.0% | |
| GTGATGCTCACTCCTGTTCA+GGG | - | chr8_1:66625563-66625582 | Msa1208500:intron | 50.0% | |
| GGGTTTGTGTTTCCCTGAAC+AGG | + | chr8_1:66625578-66625597 | None:intergenic | 50.0% | |
| ! | CACAAACCCTTCTCTAGAGG+AGG | - | chr8_1:66625589-66625608 | Msa1208500:intron | 50.0% |
| ! | ACCTTGCCTCCTCTAGAGAA+GGG | + | chr8_1:66625598-66625617 | None:intergenic | 50.0% |
| ! | TACCTTGCCTCCTCTAGAGA+AGG | + | chr8_1:66625599-66625618 | None:intergenic | 50.0% |
| ! | TCTCTAGAGGAGGCAAGGTA+AGG | - | chr8_1:66625599-66625618 | Msa1208500:intron | 50.0% |
| AGCTAGTGTGACAGCGAGTT+TGG | + | chr8_1:66625843-66625862 | None:intergenic | 50.0% | |
| CCAGGCGAAAGAAACTTCCT+TGG | + | chr8_1:66626055-66626074 | None:intergenic | 50.0% | |
| CCAAGGAAGTTTCTTTCGCC+TGG | - | chr8_1:66626052-66626071 | Msa1208500:intron | 50.0% | |
| CACTAAGATCAATGCTCCGG+CGG | + | chr8_1:66626078-66626097 | None:intergenic | 50.0% | |
| CTTTGTCTTCCATCCAGCTC+TGG | + | chr8_1:66626260-66626279 | None:intergenic | 50.0% | |
| GTCGGCACACCATTTCTCTT+TGG | + | chr8_1:66626583-66626602 | None:intergenic | 50.0% | |
| TTTGAGAGAGCAGGGGTTAG+AGG | + | chr8_1:66627070-66627089 | None:intergenic | 50.0% | |
| CTCTCTGCATGTCTGTGTCA+AGG | - | chr8_1:66627262-66627281 | Msa1208500:intron | 50.0% | |
| TTCACACCCTTCACTACCTC+AGG | + | chr8_1:66627362-66627381 | None:intergenic | 50.0% | |
| CTCTATGCCATCAGAGAGGC+AGG | + | chr8_1:66624772-66624791 | None:intergenic | 55.0% | |
| ! | ATGAGAGAGCGGATTCACGG+CGG | + | chr8_1:66624825-66624844 | None:intergenic | 55.0% |
| GCAATGCTTCTTTCCGCACG+TGG | - | chr8_1:66624908-66624927 | Msa1208500:intron | 55.0% | |
| !! | CCATGAAGACGGCTTGCTGA+TGG | + | chr8_1:66625384-66625403 | None:intergenic | 55.0% |
| CCATCAGCAAGCCGTCTTCA+TGG | - | chr8_1:66625381-66625400 | Msa1208500:CDS | 55.0% | |
| ! | ACCCTTCTCTAGAGGAGGCA+AGG | - | chr8_1:66625594-66625613 | Msa1208500:intron | 55.0% |
| AGAACTGGTACGGAACAGCC+TGG | + | chr8_1:66626999-66627018 | None:intergenic | 55.0% | |
| GCAGGGGTTAGAGGACAGAA+TGG | + | chr8_1:66627061-66627080 | None:intergenic | 55.0% | |
| ! | TGAGAGAGCGGATTCACGGC+GGG | + | chr8_1:66624824-66624843 | None:intergenic | 60.0% |
| CGGTTTCTTGCAGCAGCTGC+TGG | + | chr8_1:66625230-66625249 | None:intergenic | 60.0% | |
| AGTTTCTTTCGCCTGGCCGC+CGG | - | chr8_1:66626059-66626078 | Msa1208500:intron | 60.0% | |
| CTTCGTCGCATCTCCAGAGC+TGG | - | chr8_1:66626244-66626263 | Msa1208500:intron | 60.0% | |
| GTCGCATCTCCAGAGCTGGA+TGG | - | chr8_1:66626248-66626267 | Msa1208500:intron | 60.0% | |
| ! | GAGAGAGCGGATTCACGGCG+GGG | + | chr8_1:66624823-66624842 | None:intergenic | 65.0% |
| AGATCAATGCTCCGGCGGCC+AGG | + | chr8_1:66626073-66626092 | None:intergenic | 65.0% | |
| ! | GAGCGGATTCACGGCGGGGC+AGG | + | chr8_1:66624819-66624838 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 66622944 | 66627618 | 66622944 | ID=Msa1208500;Name=Msa1208500 |
| chr8_1 | mRNA | 66622944 | 66627618 | 66622944 | ID=Msa1208500-mRNA-1;Parent=Msa1208500;Name=Msa1208500-mRNA-1;_AED=0.11;_eAED=0.11;_QI=170|1|1|1|0.88|0.8|10|463|276 |
| chr8_1 | exon | 66622944 | 66623396 | 66622944 | ID=Msa1208500-mRNA-1:exon:21974;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66624264 | 66624343 | 66624264 | ID=Msa1208500-mRNA-1:exon:21973;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66624424 | 66624512 | 66624424 | ID=Msa1208500-mRNA-1:exon:21972;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66624947 | 66625020 | 66624947 | ID=Msa1208500-mRNA-1:exon:21971;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66625160 | 66625217 | 66625160 | ID=Msa1208500-mRNA-1:exon:21970;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66625300 | 66625422 | 66625300 | ID=Msa1208500-mRNA-1:exon:21969;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66626255 | 66626464 | 66626255 | ID=Msa1208500-mRNA-1:exon:21968;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66626709 | 66626793 | 66626709 | ID=Msa1208500-mRNA-1:exon:21967;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66627152 | 66627177 | 66627152 | ID=Msa1208500-mRNA-1:exon:21966;Parent=Msa1208500-mRNA-1 |
| chr8_1 | exon | 66627353 | 66627618 | 66627353 | ID=Msa1208500-mRNA-1:exon:21965;Parent=Msa1208500-mRNA-1 |
| chr8_1 | five_prime_UTR | 66627449 | 66627618 | 66627449 | ID=Msa1208500-mRNA-1:five_prime_utr;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66627353 | 66627448 | 66627353 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66627152 | 66627177 | 66627152 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66626709 | 66626793 | 66626709 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66626255 | 66626464 | 66626255 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66625300 | 66625422 | 66625300 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66625160 | 66625217 | 66625160 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66624947 | 66625020 | 66624947 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66624424 | 66624512 | 66624424 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | CDS | 66624274 | 66624343 | 66624274 | ID=Msa1208500-mRNA-1:cds;Parent=Msa1208500-mRNA-1 |
| chr8_1 | three_prime_UTR | 66624264 | 66624273 | 66624264 | ID=Msa1208500-mRNA-1:three_prime_utr;Parent=Msa1208500-mRNA-1 |
| chr8_1 | three_prime_UTR | 66622944 | 66623396 | 66622944 | ID=Msa1208500-mRNA-1:three_prime_utr;Parent=Msa1208500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
