Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330250 | G7JMN8 | 93.116 | 276 | 19 | 0 | 1 | 276 | 1 | 276 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1258800 | Msa1330250 | 0.953991 | 8.051058e-112 | -8.615850e-47 |
| Msa1208500 | Msa1330250 | 0.935409 | 8.881105e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330250 | MtrunA17_Chr4g0057971 | 92.780 | 277 | 19 | 1 | 1 | 276 | 1 | 277 | 0.0 | 527 |
| Msa1330250 | MtrunA17_Chr3g0099331 | 57.196 | 271 | 114 | 1 | 6 | 276 | 4 | 272 | 1.35e-118 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330250 | AT5G63280.1 | 60.887 | 248 | 95 | 1 | 31 | 276 | 24 | 271 | 2.45e-107 | 312 |
| Msa1330250 | AT5G40710.1 | 54.902 | 255 | 114 | 1 | 21 | 275 | 18 | 271 | 4.14e-102 | 299 |
| Msa1330250 | AT5G40710.2 | 59.116 | 181 | 74 | 0 | 21 | 201 | 18 | 198 | 2.49e-77 | 235 |
Find 94 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAATGCCTAATGTTGATTT+TGG | 0.166762 | 8_4:+49421159 | Msa1330250:three_prime_UTR |
| GCTGATGGACCCTCACTTAT+AGG | 0.232839 | 8_4:-49419305 | None:intergenic |
| TACTTAATTAATAAACTTCT+TGG | 0.249458 | 8_4:+49416949 | Msa1330250:five_prime_UTR |
| CAGGTTTATGTGGAATCTTC+TGG | 0.250950 | 8_4:+49417321 | Msa1330250:intron |
| CGGTTTCTTGCAGCAGCTGC+TGG | 0.266526 | 8_4:-49419166 | None:intergenic |
| TGTGATGCTCACTCCTGTTC+AGG | 0.266539 | 8_4:+49419501 | Msa1330250:CDS |
| ACACTTGCTTCTAGAGGATT+TGG | 0.284180 | 8_4:-49419140 | None:intergenic |
| CCCTGAGAATGATATGTTTA+GGG | 0.285937 | 8_4:+49418096 | Msa1330250:CDS |
| CTTGGTACTGTCCTGTATCT+TGG | 0.317927 | 8_4:+49416967 | Msa1330250:five_prime_UTR |
| TCTTCGTCGCCTCTCTTATA+CGG | 0.333768 | 8_4:+49417119 | Msa1330250:CDS |
| ACCCTGAGAATGATATGTTT+AGG | 0.338391 | 8_4:+49418095 | Msa1330250:CDS |
| TCTCTAGAGCAATGCACTTC+AGG | 0.339242 | 8_4:-49417736 | None:intergenic |
| AGGAGTGAGCATCACAAAAT+TGG | 0.344243 | 8_4:-49419494 | None:intergenic |
| GGGTTTGTGTTTCCCTGAAC+AGG | 0.363706 | 8_4:-49419514 | None:intergenic |
| TTGTACATTTAGCTATCAAT+TGG | 0.365066 | 8_4:+49421347 | Msa1330250:three_prime_UTR |
| ATTAATTAAGTAATAATTTG+TGG | 0.383090 | 8_4:-49416938 | None:intergenic |
| TTTGAGATTAGCCGTGAATA+AGG | 0.383996 | 8_4:+49417012 | Msa1330250:five_prime_UTR |
| TCTTTATTTATTTGATGAAA+AGG | 0.392404 | 8_4:+49420056 | Msa1330250:CDS |
| CTTTGTCTTCCATCCAGCTC+TGG | 0.423212 | 8_4:-49420196 | None:intergenic |
| CCAAGGAAGTTTCTTTCGCC+TGG | 0.424245 | 8_4:+49419991 | Msa1330250:CDS |
| TCCCTAAACATATCATTCTC+AGG | 0.425069 | 8_4:-49418097 | None:intergenic |
| AAATGCTTCGCTGATTTATG+TGG | 0.425702 | 8_4:+49419088 | Msa1330250:CDS |
| TTATAGTAGGAATCTTAAAC+AGG | 0.430837 | 8_4:+49417699 | Msa1330250:intron |
| CCATCAGCAAGCCGTCTTCA+TGG | 0.441147 | 8_4:+49419320 | Msa1330250:CDS |
| AGATCAATGCTCCGGCGGCC+AGG | 0.444945 | 8_4:-49420009 | None:intergenic |
| GTGATGCTCACTCCTGTTCA+GGG | 0.446768 | 8_4:+49419502 | Msa1330250:CDS |
| TTCATACCCTTCACTACCTC+AGG | 0.450533 | 8_4:-49421298 | None:intergenic |
| GTGACTGTGAGAATGGTTAA+TGG | 0.454339 | 8_4:-49421404 | None:intergenic |
| AAGCCATCATGATTGCTGTT+TGG | 0.455233 | 8_4:+49420216 | Msa1330250:exon |
| ACTTAAAATATTAAAATAGA+AGG | 0.458842 | 8_4:+49421524 | Msa1330250:three_prime_UTR |
| TACCTTGCCTCCTCTAGAGA+AGG | 0.465652 | 8_4:-49419535 | None:intergenic |
| CAGTCATCATCTATGATGAA+TGG | 0.466304 | 8_4:+49421117 | Msa1330250:three_prime_UTR |
| TGTACATTTAGCTATCAATT+GGG | 0.467415 | 8_4:+49421348 | Msa1330250:three_prime_UTR |
| AAGTAATTCGACCAAGATAC+AGG | 0.474640 | 8_4:-49416978 | None:intergenic |
| ATGCAGAGAGAATCTACTTC+GGG | 0.477536 | 8_4:-49421188 | None:intergenic |
| GAAGACACGAATTGCTGAAA+AGG | 0.480571 | 8_4:-49417101 | None:intergenic |
| ATTGCTCTAGAGAGAGAAGC+AGG | 0.482407 | 8_4:+49417746 | Msa1330250:CDS |
| AGTTTCTTTCGCCTGGCCGC+CGG | 0.484275 | 8_4:+49419998 | Msa1330250:CDS |
| ATGAATGGGTTTACAAAAGT+GGG | 0.484319 | 8_4:+49421132 | Msa1330250:three_prime_UTR |
| TACATCAGTGACTGTGAGAA+TGG | 0.493325 | 8_4:-49421411 | None:intergenic |
| AATGTTGCTTCAGGTTTATG+TGG | 0.496176 | 8_4:+49417311 | Msa1330250:intron |
| GATGAATGGGTTTACAAAAG+TGG | 0.496917 | 8_4:+49421131 | Msa1330250:three_prime_UTR |
| AGTCACTGATGTAAGCTGTT+TGG | 0.498012 | 8_4:+49421421 | Msa1330250:three_prime_UTR |
| CTTCGTCGCATCTCCAGAGC+TGG | 0.498575 | 8_4:+49420183 | Msa1330250:CDS |
| AGTCATCATCTATGATGAAT+GGG | 0.499018 | 8_4:+49421118 | Msa1330250:three_prime_UTR |
| ACCTTGCCTCCTCTAGAGAA+GGG | 0.500327 | 8_4:-49419534 | None:intergenic |
| AAGTATTGAGAATAGAAGAA+TGG | 0.505075 | 8_4:-49417078 | None:intergenic |
| GAAAGTCCAAAATCAACATT+AGG | 0.507943 | 8_4:-49421165 | None:intergenic |
| CATACATGTTGGAATTACAT+TGG | 0.510321 | 8_4:+49421475 | Msa1330250:three_prime_UTR |
| CCAGGCGAAAGAAACTTCCT+TGG | 0.523878 | 8_4:-49419991 | None:intergenic |
| CACAAAGCATTCATACATGT+TGG | 0.524403 | 8_4:+49421464 | Msa1330250:three_prime_UTR |
| GTAGTATTTGACACCATTTG+TGG | 0.525738 | 8_4:+49418033 | Msa1330250:intron |
| GGTTGCTTCGAAAGTGATAG+AGG | 0.525753 | 8_4:+49417768 | Msa1330250:CDS |
| CCATGAAGACGGCTTGCTGA+TGG | 0.527181 | 8_4:-49419320 | None:intergenic |
| AATGCTTCGCTGATTTATGT+GGG | 0.533259 | 8_4:+49419089 | Msa1330250:CDS |
| ATGTGGAATCTTCTGGTGAA+AGG | 0.536305 | 8_4:+49417328 | Msa1330250:CDS |
| TGGATTACACTTGCTTCTAG+AGG | 0.538171 | 8_4:-49419146 | None:intergenic |
| CTCTCTGCATGTCTGTGTCA+AGG | 0.545399 | 8_4:+49421201 | Msa1330250:three_prime_UTR |
| ATAACTGTGACCTTCTTCAT+CGG | 0.546667 | 8_4:-49417050 | None:intergenic |
| CACATTTCCTGAGGTAGTGA+AGG | 0.549990 | 8_4:+49421291 | Msa1330250:three_prime_UTR |
| TTTAATTGTGATCAGGGCCA+AGG | 0.550666 | 8_4:+49419974 | Msa1330250:intron |
| TTTATCTAGACAGAAATGAA+TGG | 0.558782 | 8_4:+49418137 | Msa1330250:CDS |
| GTCGCATCTCCAGAGCTGGA+TGG | 0.564944 | 8_4:+49420187 | Msa1330250:CDS |
| GTATCTTGGTCGAATTACTT+CGG | 0.566006 | 8_4:+49416981 | Msa1330250:five_prime_UTR |
| AGGAAATGTGTGTTAGACAT+TGG | 0.567455 | 8_4:-49421278 | None:intergenic |
| TAGCACTAAGATCAATGCTC+CGG | 0.569538 | 8_4:-49420017 | None:intergenic |
| AATAGAGTAACCGATGAAGA+AGG | 0.573511 | 8_4:+49417040 | Msa1330250:exon |
| ACCCTTCTCTAGAGGAGGCA+AGG | 0.573782 | 8_4:+49419533 | Msa1330250:CDS |
| CCCTAAACATATCATTCTCA+GGG | 0.574589 | 8_4:-49418096 | None:intergenic |
| CATGCAGAGAGAATCTACTT+CGG | 0.589297 | 8_4:-49421189 | None:intergenic |
| AAGCAACCTCACATAGGTGG+CGG | 0.589933 | 8_4:-49419186 | None:intergenic |
| AAGGAAATCAAACTTCGCAT+TGG | 0.592555 | 8_4:+49421254 | Msa1330250:three_prime_UTR |
| TGCATGTCTGTGTCAAGGAA+AGG | 0.592977 | 8_4:+49421206 | Msa1330250:three_prime_UTR |
| CACAAACCCTTCTCTAGAGG+AGG | 0.602598 | 8_4:+49419528 | Msa1330250:CDS |
| GAAGTATTATGAGTGCATGA+AGG | 0.605899 | 8_4:+49421235 | Msa1330250:three_prime_UTR |
| ACCTGGTTTCCGTATAAGAG+AGG | 0.612721 | 8_4:-49417128 | None:intergenic |
| AAATTAAAGCAACCTCACAT+AGG | 0.622173 | 8_4:-49419192 | None:intergenic |
| GCCTCTCTTATACGGAAACC+AGG | 0.623097 | 8_4:+49417127 | Msa1330250:CDS |
| TTAATTTGAATACAGAGTCA+CGG | 0.624981 | 8_4:+49419064 | Msa1330250:intron |
| AAACACAAACCCTTCTCTAG+AGG | 0.625387 | 8_4:+49419525 | Msa1330250:CDS |
| TTACCAAACAGCAATCATGA+TGG | 0.638173 | 8_4:-49420219 | None:intergenic |
| ATATAAGTATACCATGAAGA+CGG | 0.640466 | 8_4:-49419331 | None:intergenic |
| ATGTATGAATGCTTTGTGCG+TGG | 0.643967 | 8_4:-49421459 | None:intergenic |
| TTAAAGCAACCTCACATAGG+TGG | 0.645783 | 8_4:-49419189 | None:intergenic |
| ACATTTCCTGAGGTAGTGAA+GGG | 0.651518 | 8_4:+49421292 | Msa1330250:three_prime_UTR |
| ATGCTTCGCTGATTTATGTG+GGG | 0.654468 | 8_4:+49419090 | Msa1330250:CDS |
| CACTAAGATCAATGCTCCGG+CGG | 0.665181 | 8_4:-49420014 | None:intergenic |
| GACAGAAATGAATGGCGATG+TGG | 0.677495 | 8_4:+49418145 | Msa1330250:CDS |
| TAAATAAAGAGATAGAACAC+AGG | 0.680639 | 8_4:-49420043 | None:intergenic |
| TTGCTCTAGAGAGAGAAGCA+GGG | 0.684514 | 8_4:+49417747 | Msa1330250:CDS |
| AAGAAACCGCCACCTATGTG+AGG | 0.686960 | 8_4:+49419180 | Msa1330250:CDS |
| TGCAGAGAGAATCTACTTCG+GGG | 0.700354 | 8_4:-49421187 | None:intergenic |
| TGCTTCGAAAGTGATAGAGG+AGG | 0.706489 | 8_4:+49417771 | Msa1330250:CDS |
| TGTCTAACACACATTTCCTG+AGG | 0.708645 | 8_4:+49421282 | Msa1330250:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAAGTAATAATTTG+TGG | - | chr8_4:49416941-49416960 | None:intergenic | 10.0% |
| !!! | ATTTTAGTAATTTTAACATT+GGG | + | chr8_4:49418915-49418934 | Msa1330250:intron | 10.0% |
| !!! | TATACTTATATTTTCTTTTT+CGG | + | chr8_4:49419343-49419362 | Msa1330250:intron | 10.0% |
| !! | TTATAATTAAAATAAGCTTA+AGG | - | chr8_4:49420786-49420805 | None:intergenic | 10.0% |
| !! | ACTTAAAATATTAAAATAGA+AGG | + | chr8_4:49421524-49421543 | Msa1330250:three_prime_UTR | 10.0% |
| !! | TACTTAATTAATAAACTTCT+TGG | + | chr8_4:49416949-49416968 | Msa1330250:five_prime_UTR | 15.0% |
| !! | TTTCAAAAGAAAAAAAACAA+AGG | - | chr8_4:49417293-49417312 | None:intergenic | 15.0% |
| !!! | CATTTTAATTTCTAAATGTT+TGG | + | chr8_4:49417377-49417396 | Msa1330250:intron | 15.0% |
| !! | AAAATTATTACGATTGAAAA+AGG | - | chr8_4:49417807-49417826 | None:intergenic | 15.0% |
| !!! | TTTCAATCGTAATAATTTTA+TGG | + | chr8_4:49417808-49417827 | Msa1330250:intron | 15.0% |
| !! | AACATTTAGATGTAATAATT+AGG | + | chr8_4:49417929-49417948 | Msa1330250:intron | 15.0% |
| !! | AATACTACAAAAACATATAT+AGG | - | chr8_4:49418021-49418040 | None:intergenic | 15.0% |
| !! | TTGCAGAAATAAAAATTAAT+AGG | - | chr8_4:49418378-49418397 | None:intergenic | 15.0% |
| !!! | CATTTTAGTAATTTTAACAT+TGG | + | chr8_4:49418914-49418933 | Msa1330250:intron | 15.0% |
| !! | ATTTGTTTCAAAAAAAGTAA+AGG | - | chr8_4:49419807-49419826 | None:intergenic | 15.0% |
| !! | TATTTATTTAATTGTGATCA+GGG | + | chr8_4:49419968-49419987 | Msa1330250:intron | 15.0% |
| !!! | TCTTTATTTATTTGATGAAA+AGG | + | chr8_4:49420056-49420075 | Msa1330250:CDS | 15.0% |
| !!! | TCTTTTAAATTGTTATCTTT+TGG | + | chr8_4:49420250-49420269 | Msa1330250:intron | 15.0% |
| !!! | CTTTAATTCAGCTTTTTAAT+AGG | - | chr8_4:49416910-49416929 | None:intergenic | 20.0% |
| !!! | TTCACTATTTGATTTTGAAT+TGG | - | chr8_4:49417171-49417190 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAAGGTTAACT+TGG | - | chr8_4:49417284-49417303 | None:intergenic | 20.0% |
| !!! | TTTCAAGTGACAAAAAAAAA+AGG | + | chr8_4:49417401-49417420 | Msa1330250:intron | 20.0% |
| !! | TTAATATTTACTACATTCCT+AGG | - | chr8_4:49418651-49418670 | None:intergenic | 20.0% |
| !! | ATAAAGAATGCATATAGATT+AGG | - | chr8_4:49419257-49419276 | None:intergenic | 20.0% |
| !! | ATAACGAAAACAAATTTAAC+CGG | - | chr8_4:49419577-49419596 | None:intergenic | 20.0% |
| !!! | AGGAAGCTTTTATAATTTTT+AGG | + | chr8_4:49419844-49419863 | Msa1330250:intron | 20.0% |
| !! | CTGATCACAATTAAATAAAT+AGG | - | chr8_4:49419969-49419988 | None:intergenic | 20.0% |
| !! | CTATTTATTTAATTGTGATC+AGG | + | chr8_4:49419967-49419986 | Msa1330250:intron | 20.0% |
| !! | AAATTGCCATTAATAAACAA+TGG | + | chr8_4:49420307-49420326 | Msa1330250:intron | 20.0% |
| !! | ACAAATCCATTGTTTATTAA+TGG | - | chr8_4:49420316-49420335 | None:intergenic | 20.0% |
| !! | GTTAACTGAATTACTTAAAT+TGG | - | chr8_4:49420708-49420727 | None:intergenic | 20.0% |
| !! | TAGAAAAAATAAGCAATCTA+TGG | - | chr8_4:49420755-49420774 | None:intergenic | 20.0% |
| !!! | AGATTGCTTATTTTTTCTAA+TGG | + | chr8_4:49420756-49420775 | Msa1330250:intron | 20.0% |
| !! | CCTAATATTGATGAATAAAT+TGG | - | chr8_4:49420961-49420980 | None:intergenic | 20.0% |
| !! | CCAATTTATTCATCAATATT+AGG | + | chr8_4:49420958-49420977 | Msa1330250:intron | 20.0% |
| !!! | AAGTATTGAGAATAGAAGAA+TGG | - | chr8_4:49417081-49417100 | None:intergenic | 25.0% |
| ! | TTTGAATTGGAAATTCATTC+AGG | - | chr8_4:49417158-49417177 | None:intergenic | 25.0% |
| !!! | ATAAAAAAGAGTGCTATGTA+AGG | - | chr8_4:49417683-49417702 | None:intergenic | 25.0% |
| !!! | ATAGCACTCTTTTTTATAGT+AGG | + | chr8_4:49417686-49417705 | Msa1330250:intron | 25.0% |
| ! | TTATAGTAGGAATCTTAAAC+AGG | + | chr8_4:49417699-49417718 | Msa1330250:intron | 25.0% |
| !! | GTAATAATTTTATGGCATTG+AGG | + | chr8_4:49417816-49417835 | Msa1330250:intron | 25.0% |
| !! | TAGTTTTCTTTTTCCACAAA+TGG | - | chr8_4:49418049-49418068 | None:intergenic | 25.0% |
| ! | TTTATCTAGACAGAAATGAA+TGG | + | chr8_4:49418137-49418156 | Msa1330250:CDS | 25.0% |
| !! | GATCAAGAAATTTTTCTTCA+CGG | - | chr8_4:49418189-49418208 | None:intergenic | 25.0% |
| !!! | TTGATCAACATTTTGATAAC+AGG | + | chr8_4:49418203-49418222 | Msa1330250:CDS | 25.0% |
| !! | CTCTTATCTTATGTTTCTTT+TGG | + | chr8_4:49418280-49418299 | Msa1330250:intron | 25.0% |
| !! | TAAGAGTATAGAATTGCATT+TGG | - | chr8_4:49418403-49418422 | None:intergenic | 25.0% |
| ! | AAATGCAATTCTATACTCTT+AGG | + | chr8_4:49418402-49418421 | Msa1330250:intron | 25.0% |
| ! | AATGCAATTCTATACTCTTA+GGG | + | chr8_4:49418403-49418422 | Msa1330250:intron | 25.0% |
| ! | AAAAATCATTCCCAAGAATA+TGG | + | chr8_4:49418446-49418465 | Msa1330250:intron | 25.0% |
| ! | TTTGTAACTTCCATATTCTT+GGG | - | chr8_4:49418459-49418478 | None:intergenic | 25.0% |
| ! | AATATGGAAGTTACAAAGAA+GGG | + | chr8_4:49418462-49418481 | Msa1330250:intron | 25.0% |
| ! | TTTCTTGGGAATAAAAACAT+GGG | - | chr8_4:49418548-49418567 | None:intergenic | 25.0% |
| !! | TTTTCTTGGGAATAAAAACA+TGG | - | chr8_4:49418549-49418568 | None:intergenic | 25.0% |
| !!! | TGTTTTTATTCCCAAGAAAA+TGG | + | chr8_4:49418549-49418568 | Msa1330250:intron | 25.0% |
| ! | TAGGATTATTTGTAAACATG+GGG | - | chr8_4:49418632-49418651 | None:intergenic | 25.0% |
| ! | CTAGGATTATTTGTAAACAT+GGG | - | chr8_4:49418633-49418652 | None:intergenic | 25.0% |
| !! | TTAATTTGAATACAGAGTCA+CGG | + | chr8_4:49419064-49419083 | Msa1330250:intron | 25.0% |
| ! | ATATAAGTATACCATGAAGA+CGG | - | chr8_4:49419334-49419353 | None:intergenic | 25.0% |
| !! | ATTGATTAGTTCAGTAATAC+AGG | + | chr8_4:49419617-49419636 | Msa1330250:intron | 25.0% |
| !! | TTGATTAGTTCAGTAATACA+GGG | + | chr8_4:49419618-49419637 | Msa1330250:intron | 25.0% |
| !!! | TTACTTGAATGGTTGATTTT+TGG | + | chr8_4:49419733-49419752 | Msa1330250:intron | 25.0% |
| ! | TAAATAAAGAGATAGAACAC+AGG | - | chr8_4:49420046-49420065 | None:intergenic | 25.0% |
| ! | TATTGCTGAAAAATCTTGAT+TGG | - | chr8_4:49420112-49420131 | None:intergenic | 25.0% |
| !!! | TTATCTTTTGGTTATTTGCA+TGG | + | chr8_4:49420262-49420281 | Msa1330250:intron | 25.0% |
| ! | GTACATGTAAAAGAAAACTT+AGG | - | chr8_4:49420401-49420420 | None:intergenic | 25.0% |
| ! | AGAAAATAAGACCAATAATG+AGG | - | chr8_4:49420460-49420479 | None:intergenic | 25.0% |
| ! | AAAATACACACAATAACCAA+TGG | - | chr8_4:49420577-49420596 | None:intergenic | 25.0% |
| ! | CATGGTAGAAGTAAAATTTA+AGG | - | chr8_4:49420817-49420836 | None:intergenic | 25.0% |
| ! | TGAGTAAAGTAAAAGTCATT+AGG | - | chr8_4:49421043-49421062 | None:intergenic | 25.0% |
| ! | TTGTACATTTAGCTATCAAT+TGG | + | chr8_4:49421347-49421366 | Msa1330250:three_prime_UTR | 25.0% |
| ! | TGTACATTTAGCTATCAATT+GGG | + | chr8_4:49421348-49421367 | Msa1330250:three_prime_UTR | 25.0% |
| ! | TCTATTTTCGACCTTATTCA+CGG | - | chr8_4:49417026-49417045 | None:intergenic | 30.0% |
| !!! | TTCTTTTGAAATGTTGCTTC+AGG | + | chr8_4:49417302-49417321 | Msa1330250:intron | 30.0% |
| TTTACAAAGTCGCTTATAAC+TGG | - | chr8_4:49417475-49417494 | None:intergenic | 30.0% | |
| !! | AATTTTATGGCATTGAGGTA+TGG | + | chr8_4:49417821-49417840 | Msa1330250:intron | 30.0% |
| !!! | TTATTTTAGTGCCTTGAATC+AGG | + | chr8_4:49417885-49417904 | Msa1330250:intron | 30.0% |
| TAATACCTGTAAGGTAATAC+TGG | - | chr8_4:49418325-49418344 | None:intergenic | 30.0% | |
| AGAAAACAGTAATACCTGTA+AGG | - | chr8_4:49418334-49418353 | None:intergenic | 30.0% | |
| ATGCAATTCTATACTCTTAG+GGG | + | chr8_4:49418404-49418423 | Msa1330250:intron | 30.0% | |
| CTTTGTAACTTCCATATTCT+TGG | - | chr8_4:49418460-49418479 | None:intergenic | 30.0% | |
| GAATATGGAAGTTACAAAGA+AGG | + | chr8_4:49418461-49418480 | Msa1330250:intron | 30.0% | |
| TGGGAAGTTATTTAATTCCT+GGG | - | chr8_4:49418522-49418541 | None:intergenic | 30.0% | |
| ATGGGAAGTTATTTAATTCC+TGG | - | chr8_4:49418523-49418542 | None:intergenic | 30.0% | |
| GGAATAAAAACATGGGAAAT+GGG | - | chr8_4:49418541-49418560 | None:intergenic | 30.0% | |
| TTTATTCCCAAGAAAATGGA+CGG | + | chr8_4:49418553-49418572 | Msa1330250:intron | 30.0% | |
| GGAATAAAATATTCCCATGA+AGG | + | chr8_4:49418575-49418594 | Msa1330250:intron | 30.0% | |
| ATAAAATATTCCCATGAAGG+TGG | + | chr8_4:49418578-49418597 | Msa1330250:intron | 30.0% | |
| TAAAATATTCCCATGAAGGT+GGG | + | chr8_4:49418579-49418598 | Msa1330250:intron | 30.0% | |
| TTTGTAAACATGGGGAATAT+AGG | - | chr8_4:49418624-49418643 | None:intergenic | 30.0% | |
| CCTAGGATTATTTGTAAACA+TGG | - | chr8_4:49418634-49418653 | None:intergenic | 30.0% | |
| CCATGTTTACAAATAATCCT+AGG | + | chr8_4:49418631-49418650 | Msa1330250:intron | 30.0% | |
| AAAGTAAACTTATGAGAGAG+CGG | - | chr8_4:49418775-49418794 | None:intergenic | 30.0% | |
| !! | AGCATTGCACTTTTTATAAG+AGG | - | chr8_4:49418835-49418854 | None:intergenic | 30.0% |
| !! | AGTAATTTTAACATTGGGTG+TGG | + | chr8_4:49418920-49418939 | Msa1330250:intron | 30.0% |
| TAAACTCAAAACAGACTTGT+TGG | + | chr8_4:49418949-49418968 | Msa1330250:intron | 30.0% | |
| AAATTAAAGCAACCTCACAT+AGG | - | chr8_4:49419195-49419214 | None:intergenic | 30.0% | |
| !! | AGTTGTTTTCCTATAAGTGA+GGG | + | chr8_4:49419296-49419315 | Msa1330250:CDS | 30.0% |
| AAAATGTAGTGACATCATTG+TGG | - | chr8_4:49419383-49419402 | None:intergenic | 30.0% | |
| ! | TTCTTATGTTGATTGTGCAT+TGG | + | chr8_4:49419455-49419474 | Msa1330250:intron | 30.0% |
| CCATTCAAGTAATGTCAATA+AGG | - | chr8_4:49419725-49419744 | None:intergenic | 30.0% | |
| CCTTATTGACATTACTTGAA+TGG | + | chr8_4:49419722-49419741 | Msa1330250:intron | 30.0% | |
| AGCAATATCTCAAAACTGTT+GGG | + | chr8_4:49420125-49420144 | Msa1330250:intron | 30.0% | |
| TGAAATGAAGAAAGAAGGAT+TGG | - | chr8_4:49420378-49420397 | None:intergenic | 30.0% | |
| TTAGGTGAAATGAAGAAAGA+AGG | - | chr8_4:49420383-49420402 | None:intergenic | 30.0% | |
| TACTTTCTATGCCTCATTAT+TGG | + | chr8_4:49420446-49420465 | Msa1330250:intron | 30.0% | |
| ATCAGAACTTTAATGTCTGT+CGG | - | chr8_4:49420540-49420559 | None:intergenic | 30.0% | |
| AATAAATTGGAGAACTGGTA+CGG | - | chr8_4:49420948-49420967 | None:intergenic | 30.0% | |
| TGATGAATAAATTGGAGAAC+TGG | - | chr8_4:49420953-49420972 | None:intergenic | 30.0% | |
| GTAAAGTAAAAGTCATTAGG+CGG | - | chr8_4:49421040-49421059 | None:intergenic | 30.0% | |
| AAAGAGTTACACATGATAAG+AGG | - | chr8_4:49421074-49421093 | None:intergenic | 30.0% | |
| ! | TGTAACTCTTTTACTTATGC+AGG | + | chr8_4:49421083-49421102 | Msa1330250:intron | 30.0% |
| AGTCATCATCTATGATGAAT+GGG | + | chr8_4:49421118-49421137 | Msa1330250:three_prime_UTR | 30.0% | |
| ! | ATGAATGGGTTTACAAAAGT+GGG | + | chr8_4:49421132-49421151 | Msa1330250:three_prime_UTR | 30.0% |
| !!! | GTAATGCCTAATGTTGATTT+TGG | + | chr8_4:49421159-49421178 | Msa1330250:three_prime_UTR | 30.0% |
| GAAAGTCCAAAATCAACATT+AGG | - | chr8_4:49421168-49421187 | None:intergenic | 30.0% | |
| CATACATGTTGGAATTACAT+TGG | + | chr8_4:49421475-49421494 | Msa1330250:three_prime_UTR | 30.0% | |
| AAGTAATTCGACCAAGATAC+AGG | - | chr8_4:49416981-49417000 | None:intergenic | 35.0% | |
| GTATCTTGGTCGAATTACTT+CGG | + | chr8_4:49416981-49417000 | Msa1330250:five_prime_UTR | 35.0% | |
| ! | TTTGAGATTAGCCGTGAATA+AGG | + | chr8_4:49417012-49417031 | Msa1330250:five_prime_UTR | 35.0% |
| AATAGAGTAACCGATGAAGA+AGG | + | chr8_4:49417040-49417059 | Msa1330250:exon | 35.0% | |
| ATAACTGTGACCTTCTTCAT+CGG | - | chr8_4:49417053-49417072 | None:intergenic | 35.0% | |
| ! | AAATTCATTCAGGTGTTACC+TGG | - | chr8_4:49417148-49417167 | None:intergenic | 35.0% |
| ! | AATGTTGCTTCAGGTTTATG+TGG | + | chr8_4:49417311-49417330 | Msa1330250:intron | 35.0% |
| AATCTTCTGGTGAAAGGTAA+TGG | + | chr8_4:49417334-49417353 | Msa1330250:intron | 35.0% | |
| !!! | TGTATGTTTGGTTCTGCTTT+TGG | - | chr8_4:49417564-49417583 | None:intergenic | 35.0% |
| ACAAAAGCTACGTGTATGTT+TGG | - | chr8_4:49417576-49417595 | None:intergenic | 35.0% | |
| GATAACGAAGAAGATTGCTT+CGG | - | chr8_4:49417628-49417647 | None:intergenic | 35.0% | |
| AATCATGTGAGACAAGCTAA+GGG | - | chr8_4:49417650-49417669 | None:intergenic | 35.0% | |
| TAATCATGTGAGACAAGCTA+AGG | - | chr8_4:49417651-49417670 | None:intergenic | 35.0% | |
| TAGACATATGTCCTGATTCA+AGG | - | chr8_4:49417899-49417918 | None:intergenic | 35.0% | |
| TTGAATCAGGACATATGTCT+AGG | + | chr8_4:49417898-49417917 | Msa1330250:intron | 35.0% | |
| GTAGTATTTGACACCATTTG+TGG | + | chr8_4:49418033-49418052 | Msa1330250:intron | 35.0% | |
| ACCCTGAGAATGATATGTTT+AGG | + | chr8_4:49418095-49418114 | Msa1330250:CDS | 35.0% | |
| CCCTAAACATATCATTCTCA+GGG | - | chr8_4:49418099-49418118 | None:intergenic | 35.0% | |
| CCCTGAGAATGATATGTTTA+GGG | + | chr8_4:49418096-49418115 | Msa1330250:CDS | 35.0% | |
| TCCCTAAACATATCATTCTC+AGG | - | chr8_4:49418100-49418119 | None:intergenic | 35.0% | |
| TGCAATTCTATACTCTTAGG+GGG | + | chr8_4:49418405-49418424 | Msa1330250:intron | 35.0% | |
| ! | TGGGAATGATTTTTACAACC+AGG | - | chr8_4:49418440-49418459 | None:intergenic | 35.0% |
| !! | CCTAGCTTTGTAACAAACAT+AGG | - | chr8_4:49418490-49418509 | None:intergenic | 35.0% |
| ! | CCTATGTTTGTTACAAAGCT+AGG | + | chr8_4:49418487-49418506 | Msa1330250:intron | 35.0% |
| AAGCTAGGATATTAATTCCC+AGG | + | chr8_4:49418502-49418521 | Msa1330250:intron | 35.0% | |
| GGGAATAAAAACATGGGAAA+TGG | - | chr8_4:49418542-49418561 | None:intergenic | 35.0% | |
| TTATTCCCAAGAAAATGGAC+GGG | + | chr8_4:49418554-49418573 | Msa1330250:intron | 35.0% | |
| ! | TTATTCCCGTCCATTTTCTT+GGG | - | chr8_4:49418562-49418581 | None:intergenic | 35.0% |
| ! | TTTATTCCCGTCCATTTTCT+TGG | - | chr8_4:49418563-49418582 | None:intergenic | 35.0% |
| AAAATATTCCCATGAAGGTG+GGG | + | chr8_4:49418580-49418599 | Msa1330250:intron | 35.0% | |
| ! | ACTTGTTGGAAGCTTAAGTT+TGG | + | chr8_4:49418963-49418982 | Msa1330250:intron | 35.0% |
| CCATACGAGTAATGAAATTG+TGG | - | chr8_4:49419044-49419063 | None:intergenic | 35.0% | |
| CCACAATTTCATTACTCGTA+TGG | + | chr8_4:49419041-49419060 | Msa1330250:intron | 35.0% | |
| !! | AAATGCTTCGCTGATTTATG+TGG | + | chr8_4:49419088-49419107 | Msa1330250:CDS | 35.0% |
| !! | AATGCTTCGCTGATTTATGT+GGG | + | chr8_4:49419089-49419108 | Msa1330250:CDS | 35.0% |
| !! | CAGTTGTTTTCCTATAAGTG+AGG | + | chr8_4:49419295-49419314 | Msa1330250:CDS | 35.0% |
| ATTTAACCGGTGAGATAATC+AGG | - | chr8_4:49419564-49419583 | None:intergenic | 35.0% | |
| ! | TATCTGTGTTGTGAGGTTTT+AGG | + | chr8_4:49419665-49419684 | Msa1330250:intron | 35.0% |
| TCAACTTTGTGAATAGCACA+AGG | - | chr8_4:49419691-49419710 | None:intergenic | 35.0% | |
| !! | AATGTCTTTCCTTTTCTAGC+AGG | + | chr8_4:49419824-49419843 | Msa1330250:intron | 35.0% |
| TAAAAGCTTCCTGCTAGAAA+AGG | - | chr8_4:49419836-49419855 | None:intergenic | 35.0% | |
| !! | CCACAGTTTCTGAAGATTTT+GGG | + | chr8_4:49419910-49419929 | Msa1330250:intron | 35.0% |
| CAGCAATATCTCAAAACTGT+TGG | + | chr8_4:49420124-49420143 | Msa1330250:intron | 35.0% | |
| TTACCAAACAGCAATCATGA+TGG | - | chr8_4:49420222-49420241 | None:intergenic | 35.0% | |
| AGAAAGAAGGATTGGAAAAC+AGG | - | chr8_4:49420370-49420389 | None:intergenic | 35.0% | |
| GTACATTGTCCAAAGAGAAA+TGG | + | chr8_4:49420510-49420529 | Msa1330250:intron | 35.0% | |
| ! | TAAAGTTCTGATGTCGACTA+TGG | + | chr8_4:49420548-49420567 | Msa1330250:intron | 35.0% |
| AAGAGAGAGATTAGCATGTA+TGG | + | chr8_4:49420632-49420651 | Msa1330250:intron | 35.0% | |
| TGGTCACTCATTTGAGAATA+AGG | - | chr8_4:49420735-49420754 | None:intergenic | 35.0% | |
| ! | CTTCTACCATGCACATTTTA+TGG | + | chr8_4:49420826-49420845 | Msa1330250:intron | 35.0% |
| ATACCTCCATAAAATGTGCA+TGG | - | chr8_4:49420835-49420854 | None:intergenic | 35.0% | |
| AGACTACATGTATTCTCAAC+TGG | + | chr8_4:49420903-49420922 | Msa1330250:intron | 35.0% | |
| CAGTCATCATCTATGATGAA+TGG | + | chr8_4:49421117-49421136 | Msa1330250:three_prime_UTR | 35.0% | |
| ! | GATGAATGGGTTTACAAAAG+TGG | + | chr8_4:49421131-49421150 | Msa1330250:three_prime_UTR | 35.0% |
| ! | GAAGTATTATGAGTGCATGA+AGG | + | chr8_4:49421235-49421254 | Msa1330250:three_prime_UTR | 35.0% |
| AAGGAAATCAAACTTCGCAT+TGG | + | chr8_4:49421254-49421273 | Msa1330250:three_prime_UTR | 35.0% | |
| AGGAAATGTGTGTTAGACAT+TGG | - | chr8_4:49421281-49421300 | None:intergenic | 35.0% | |
| ! | CACAAAGCATTCATACATGT+TGG | + | chr8_4:49421464-49421483 | Msa1330250:three_prime_UTR | 35.0% |
| GAAGACACGAATTGCTGAAA+AGG | - | chr8_4:49417104-49417123 | None:intergenic | 40.0% | |
| CAGGTTTATGTGGAATCTTC+TGG | + | chr8_4:49417321-49417340 | Msa1330250:intron | 40.0% | |
| ATGTGGAATCTTCTGGTGAA+AGG | + | chr8_4:49417328-49417347 | Msa1330250:CDS | 40.0% | |
| !! | TCTGGTGAAAGGTAATGGAA+TGG | + | chr8_4:49417339-49417358 | Msa1330250:intron | 40.0% |
| !!! | ATGTTTGGTTCTGCTTTTGG+AGG | - | chr8_4:49417561-49417580 | None:intergenic | 40.0% |
| ! | GAAAGTGATAGAGGAGGTAT+GGG | + | chr8_4:49417777-49417796 | Msa1330250:intron | 40.0% |
| ! | CACAGTTTTGCTCTCTAAAC+TGG | + | chr8_4:49417988-49418007 | Msa1330250:intron | 40.0% |
| TTGAGCCAGTATTACCTTAC+AGG | + | chr8_4:49418317-49418336 | Msa1330250:intron | 40.0% | |
| !! | AGTTTTATCCCCACCTTCAT+GGG | - | chr8_4:49418591-49418610 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCCACCTTCA+TGG | - | chr8_4:49418592-49418611 | None:intergenic | 40.0% |
| GTAAACATGGGGAATATAGG+TGG | - | chr8_4:49418621-49418640 | None:intergenic | 40.0% | |
| ATGGCATAGAGAGTTAGGAT+TGG | + | chr8_4:49418720-49418739 | Msa1330250:intron | 40.0% | |
| ! | ATAGAGAGTTAGGATTGGCA+GGG | + | chr8_4:49418725-49418744 | Msa1330250:intron | 40.0% |
| CAATTGTTTATTCCCACGTG+CGG | - | chr8_4:49418863-49418882 | None:intergenic | 40.0% | |
| !! | ATGCTTCGCTGATTTATGTG+GGG | + | chr8_4:49419090-49419109 | Msa1330250:CDS | 40.0% |
| ! | ACACTTGCTTCTAGAGGATT+TGG | - | chr8_4:49419143-49419162 | None:intergenic | 40.0% |
| TGGATTACACTTGCTTCTAG+AGG | - | chr8_4:49419149-49419168 | None:intergenic | 40.0% | |
| TTAAAGCAACCTCACATAGG+TGG | - | chr8_4:49419192-49419211 | None:intergenic | 40.0% | |
| AGGAGTGAGCATCACAAAAT+TGG | - | chr8_4:49419497-49419516 | None:intergenic | 40.0% | |
| AAACACAAACCCTTCTCTAG+AGG | + | chr8_4:49419525-49419544 | Msa1330250:CDS | 40.0% | |
| CAACACAGATACTCTATGAC+TGG | - | chr8_4:49419656-49419675 | None:intergenic | 40.0% | |
| ! | CATAGAGTATCTGTGTTGTG+AGG | + | chr8_4:49419658-49419677 | Msa1330250:intron | 40.0% |
| !! | GCCACAGTTTCTGAAGATTT+TGG | + | chr8_4:49419909-49419928 | Msa1330250:intron | 40.0% |
| CCCAAAATCTTCAGAAACTG+TGG | - | chr8_4:49419913-49419932 | None:intergenic | 40.0% | |
| TTTAATTGTGATCAGGGCCA+AGG | + | chr8_4:49419974-49419993 | Msa1330250:intron | 40.0% | |
| TAGCACTAAGATCAATGCTC+CGG | - | chr8_4:49420020-49420039 | None:intergenic | 40.0% | |
| ! | AAGCCATCATGATTGCTGTT+TGG | + | chr8_4:49420216-49420235 | Msa1330250:exon | 40.0% |
| TGGTTATTTGCATGGCAGAA+TGG | + | chr8_4:49420270-49420289 | Msa1330250:intron | 40.0% | |
| GGTTATTTGCATGGCAGAAT+GGG | + | chr8_4:49420271-49420290 | Msa1330250:intron | 40.0% | |
| ! | ATGTCGACTATGGTATCCAT+TGG | + | chr8_4:49420558-49420577 | Msa1330250:intron | 40.0% |
| ! | CTACCATGCACATTTTATGG+AGG | + | chr8_4:49420829-49420848 | Msa1330250:intron | 40.0% |
| CTCAACTGGAATTTATGACC+AGG | + | chr8_4:49420917-49420936 | Msa1330250:intron | 40.0% | |
| ! | AGCATAACTTTGAGAGAGCA+GGG | - | chr8_4:49421017-49421036 | None:intergenic | 40.0% |
| ATGCAGAGAGAATCTACTTC+GGG | - | chr8_4:49421191-49421210 | None:intergenic | 40.0% | |
| CATGCAGAGAGAATCTACTT+CGG | - | chr8_4:49421192-49421211 | None:intergenic | 40.0% | |
| TGTCTAACACACATTTCCTG+AGG | + | chr8_4:49421282-49421301 | Msa1330250:three_prime_UTR | 40.0% | |
| ACATTTCCTGAGGTAGTGAA+GGG | + | chr8_4:49421292-49421311 | Msa1330250:three_prime_UTR | 40.0% | |
| GTGACTGTGAGAATGGTTAA+TGG | - | chr8_4:49421407-49421426 | None:intergenic | 40.0% | |
| TACATCAGTGACTGTGAGAA+TGG | - | chr8_4:49421414-49421433 | None:intergenic | 40.0% | |
| AGTCACTGATGTAAGCTGTT+TGG | + | chr8_4:49421421-49421440 | Msa1330250:three_prime_UTR | 40.0% | |
| ATGTATGAATGCTTTGTGCG+TGG | - | chr8_4:49421462-49421481 | None:intergenic | 40.0% | |
| CTTGGTACTGTCCTGTATCT+TGG | + | chr8_4:49416967-49416986 | Msa1330250:five_prime_UTR | 45.0% | |
| TCTTCGTCGCCTCTCTTATA+CGG | + | chr8_4:49417119-49417138 | Msa1330250:CDS | 45.0% | |
| ACCTGGTTTCCGTATAAGAG+AGG | - | chr8_4:49417131-49417150 | None:intergenic | 45.0% | |
| !!! | TTTGGTTCTGCTTTTGGAGG+AGG | - | chr8_4:49417558-49417577 | None:intergenic | 45.0% |
| !! | TCTCTAGAGCAATGCACTTC+AGG | - | chr8_4:49417739-49417758 | None:intergenic | 45.0% |
| !! | ATTGCTCTAGAGAGAGAAGC+AGG | + | chr8_4:49417746-49417765 | Msa1330250:CDS | 45.0% |
| !! | TTGCTCTAGAGAGAGAAGCA+GGG | + | chr8_4:49417747-49417766 | Msa1330250:CDS | 45.0% |
| GGTTGCTTCGAAAGTGATAG+AGG | + | chr8_4:49417768-49417787 | Msa1330250:CDS | 45.0% | |
| TGCTTCGAAAGTGATAGAGG+AGG | + | chr8_4:49417771-49417790 | Msa1330250:CDS | 45.0% | |
| CGAAAGTGATAGAGGAGGTA+TGG | + | chr8_4:49417776-49417795 | Msa1330250:intron | 45.0% | |
| GACAGAAATGAATGGCGATG+TGG | + | chr8_4:49418145-49418164 | Msa1330250:CDS | 45.0% | |
| TATGTTACCTGCCTCTCTGA+TGG | + | chr8_4:49418701-49418720 | Msa1330250:intron | 45.0% | |
| AACTCTCTATGCCATCAGAG+AGG | - | chr8_4:49418715-49418734 | None:intergenic | 45.0% | |
| CTCTGATGGCATAGAGAGTT+AGG | + | chr8_4:49418715-49418734 | Msa1330250:intron | 45.0% | |
| ! | CATAGAGAGTTAGGATTGGC+AGG | + | chr8_4:49418724-49418743 | Msa1330250:intron | 45.0% |
| ! | CTTATGAGAGAGCGGATTCA+CGG | - | chr8_4:49418767-49418786 | None:intergenic | 45.0% |
| CGCACGTGGGAATAAACAAT+TGG | + | chr8_4:49418861-49418880 | Msa1330250:intron | 45.0% | |
| GTAAGGCCTGATTATCTCAC+CGG | + | chr8_4:49419555-49419574 | Msa1330250:intron | 45.0% | |
| ! | GCATAACTTTGAGAGAGCAG+GGG | - | chr8_4:49421016-49421035 | None:intergenic | 45.0% |
| ! | GAGCATAACTTTGAGAGAGC+AGG | - | chr8_4:49421018-49421037 | None:intergenic | 45.0% |
| TGCAGAGAGAATCTACTTCG+GGG | - | chr8_4:49421190-49421209 | None:intergenic | 45.0% | |
| TGCATGTCTGTGTCAAGGAA+AGG | + | chr8_4:49421206-49421225 | Msa1330250:three_prime_UTR | 45.0% | |
| CACATTTCCTGAGGTAGTGA+AGG | + | chr8_4:49421291-49421310 | Msa1330250:three_prime_UTR | 45.0% | |
| TTCATACCCTTCACTACCTC+AGG | - | chr8_4:49421301-49421320 | None:intergenic | 45.0% | |
| GCCTCTCTTATACGGAAACC+AGG | + | chr8_4:49417127-49417146 | Msa1330250:CDS | 50.0% | |
| !! | CTTAGGGGGTGTTTGTTTCC+TGG | + | chr8_4:49418419-49418438 | Msa1330250:intron | 50.0% |
| CAATGCTTCTTTCCGCACGT+GGG | + | chr8_4:49418848-49418867 | Msa1330250:intron | 50.0% | |
| AAGAAACCGCCACCTATGTG+AGG | + | chr8_4:49419180-49419199 | Msa1330250:CDS | 50.0% | |
| AAGCAACCTCACATAGGTGG+CGG | - | chr8_4:49419189-49419208 | None:intergenic | 50.0% | |
| ! | GCTGATGGACCCTCACTTAT+AGG | - | chr8_4:49419308-49419327 | None:intergenic | 50.0% |
| TGTGATGCTCACTCCTGTTC+AGG | + | chr8_4:49419501-49419520 | Msa1330250:CDS | 50.0% | |
| GTGATGCTCACTCCTGTTCA+GGG | + | chr8_4:49419502-49419521 | Msa1330250:CDS | 50.0% | |
| GGGTTTGTGTTTCCCTGAAC+AGG | - | chr8_4:49419517-49419536 | None:intergenic | 50.0% | |
| ! | CACAAACCCTTCTCTAGAGG+AGG | + | chr8_4:49419528-49419547 | Msa1330250:CDS | 50.0% |
| ! | ACCTTGCCTCCTCTAGAGAA+GGG | - | chr8_4:49419537-49419556 | None:intergenic | 50.0% |
| ! | TACCTTGCCTCCTCTAGAGA+AGG | - | chr8_4:49419538-49419557 | None:intergenic | 50.0% |
| ! | TCTCTAGAGGAGGCAAGGTA+AGG | + | chr8_4:49419538-49419557 | Msa1330250:intron | 50.0% |
| AGCTAGTGTGACAGCGAGTT+TGG | - | chr8_4:49419782-49419801 | None:intergenic | 50.0% | |
| CCAGGCGAAAGAAACTTCCT+TGG | - | chr8_4:49419994-49420013 | None:intergenic | 50.0% | |
| CCAAGGAAGTTTCTTTCGCC+TGG | + | chr8_4:49419991-49420010 | Msa1330250:CDS | 50.0% | |
| CACTAAGATCAATGCTCCGG+CGG | - | chr8_4:49420017-49420036 | None:intergenic | 50.0% | |
| CTTTGTCTTCCATCCAGCTC+TGG | - | chr8_4:49420199-49420218 | None:intergenic | 50.0% | |
| GTCGGCACACCATTTCTCTT+TGG | - | chr8_4:49420522-49420541 | None:intergenic | 50.0% | |
| TTTGAGAGAGCAGGGGTTAG+AGG | - | chr8_4:49421009-49421028 | None:intergenic | 50.0% | |
| CTCTCTGCATGTCTGTGTCA+AGG | + | chr8_4:49421201-49421220 | Msa1330250:three_prime_UTR | 50.0% | |
| CTCTATGCCATCAGAGAGGC+AGG | - | chr8_4:49418711-49418730 | None:intergenic | 55.0% | |
| ! | ATGAGAGAGCGGATTCACGG+CGG | - | chr8_4:49418764-49418783 | None:intergenic | 55.0% |
| GCAATGCTTCTTTCCGCACG+TGG | + | chr8_4:49418847-49418866 | Msa1330250:intron | 55.0% | |
| !! | CCATGAAGACGGCTTGCTGA+TGG | - | chr8_4:49419323-49419342 | None:intergenic | 55.0% |
| CCATCAGCAAGCCGTCTTCA+TGG | + | chr8_4:49419320-49419339 | Msa1330250:CDS | 55.0% | |
| ! | ACCCTTCTCTAGAGGAGGCA+AGG | + | chr8_4:49419533-49419552 | Msa1330250:CDS | 55.0% |
| AGAACTGGTACGGAACAGCC+TGG | - | chr8_4:49420938-49420957 | None:intergenic | 55.0% | |
| GCAGGGGTTAGAGGACAGAA+TGG | - | chr8_4:49421000-49421019 | None:intergenic | 55.0% | |
| ! | TGAGAGAGCGGATTCACGGC+GGG | - | chr8_4:49418763-49418782 | None:intergenic | 60.0% |
| CGGTTTCTTGCAGCAGCTGC+TGG | - | chr8_4:49419169-49419188 | None:intergenic | 60.0% | |
| AGTTTCTTTCGCCTGGCCGC+CGG | + | chr8_4:49419998-49420017 | Msa1330250:CDS | 60.0% | |
| CTTCGTCGCATCTCCAGAGC+TGG | + | chr8_4:49420183-49420202 | Msa1330250:CDS | 60.0% | |
| GTCGCATCTCCAGAGCTGGA+TGG | + | chr8_4:49420187-49420206 | Msa1330250:CDS | 60.0% | |
| ! | GAGAGAGCGGATTCACGGCG+GGG | - | chr8_4:49418762-49418781 | None:intergenic | 65.0% |
| AGATCAATGCTCCGGCGGCC+AGG | - | chr8_4:49420012-49420031 | None:intergenic | 65.0% | |
| ! | GAGCGGATTCACGGCGGGGC+AGG | - | chr8_4:49418758-49418777 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49416883 | 49421557 | 49416883 | ID=Msa1330250;Name=Msa1330250 |
| chr8_4 | mRNA | 49416883 | 49421557 | 49416883 | ID=Msa1330250-mRNA-1;Parent=Msa1330250;Name=Msa1330250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=170|1|1|1|0.88|0.8|10|463|276 |
| chr8_4 | exon | 49416883 | 49417148 | 49416883 | ID=Msa1330250-mRNA-1:exon:14294;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49417324 | 49417349 | 49417324 | ID=Msa1330250-mRNA-1:exon:14295;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49417708 | 49417792 | 49417708 | ID=Msa1330250-mRNA-1:exon:14296;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49418037 | 49418246 | 49418037 | ID=Msa1330250-mRNA-1:exon:14297;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49419079 | 49419201 | 49419079 | ID=Msa1330250-mRNA-1:exon:14298;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49419284 | 49419341 | 49419284 | ID=Msa1330250-mRNA-1:exon:14299;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49419481 | 49419554 | 49419481 | ID=Msa1330250-mRNA-1:exon:14300;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49419989 | 49420077 | 49419989 | ID=Msa1330250-mRNA-1:exon:14301;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49420158 | 49420237 | 49420158 | ID=Msa1330250-mRNA-1:exon:14302;Parent=Msa1330250-mRNA-1 |
| chr8_4 | exon | 49421105 | 49421557 | 49421105 | ID=Msa1330250-mRNA-1:exon:14303;Parent=Msa1330250-mRNA-1 |
| chr8_4 | five_prime_UTR | 49416883 | 49417052 | 49416883 | ID=Msa1330250-mRNA-1:five_prime_utr;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49417053 | 49417148 | 49417053 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49417324 | 49417349 | 49417324 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49417708 | 49417792 | 49417708 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49418037 | 49418246 | 49418037 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49419079 | 49419201 | 49419079 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49419284 | 49419341 | 49419284 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49419481 | 49419554 | 49419481 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49419989 | 49420077 | 49419989 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | CDS | 49420158 | 49420227 | 49420158 | ID=Msa1330250-mRNA-1:cds;Parent=Msa1330250-mRNA-1 |
| chr8_4 | three_prime_UTR | 49420228 | 49420237 | 49420228 | ID=Msa1330250-mRNA-1:three_prime_utr;Parent=Msa1330250-mRNA-1 |
| chr8_4 | three_prime_UTR | 49421105 | 49421557 | 49421105 | ID=Msa1330250-mRNA-1:three_prime_utr;Parent=Msa1330250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
