Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258800 | XP_003608901.2 | 93.116 | 276 | 19 | 0 | 1 | 276 | 1 | 276 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258800 | G7JMN8 | 93.116 | 276 | 19 | 0 | 1 | 276 | 1 | 276 | 0.0 | 531 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1258800 | Msa1330250 | 0.953991 | 8.051058e-112 | -8.615850e-47 |
| Msa1044420 | Msa1258800 | 0.805769 | 1.137640e-49 | -8.615850e-47 |
| Msa1208500 | Msa1258800 | 0.949320 | 1.614007e-107 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258800 | MtrunA17_Chr4g0057971 | 92.780 | 277 | 19 | 1 | 1 | 276 | 1 | 277 | 0.0 | 527 |
| Msa1258800 | MtrunA17_Chr3g0099331 | 57.196 | 271 | 114 | 1 | 6 | 276 | 4 | 272 | 1.35e-118 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258800 | AT5G63280.1 | 60.887 | 248 | 95 | 1 | 31 | 276 | 24 | 271 | 2.45e-107 | 312 |
| Msa1258800 | AT5G40710.1 | 54.902 | 255 | 114 | 1 | 21 | 275 | 18 | 271 | 4.14e-102 | 299 |
| Msa1258800 | AT5G40710.2 | 59.116 | 181 | 74 | 0 | 21 | 201 | 18 | 198 | 2.49e-77 | 235 |
Find 94 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAATGCCTAATGTTGATTT+TGG | 0.166762 | 8_2:-60061686 | Msa1258800:three_prime_UTR |
| GCTGATGGACCCTCACTTAT+AGG | 0.232839 | 8_2:+60063540 | None:intergenic |
| TACTTAATTAATAAACTTCT+TGG | 0.249458 | 8_2:-60065896 | Msa1258800:five_prime_UTR |
| CAGGTTTATGTGGAATCTTC+TGG | 0.250950 | 8_2:-60065524 | Msa1258800:CDS |
| CGGTTTCTTGCAGCAGCTGC+TGG | 0.266526 | 8_2:+60063679 | None:intergenic |
| TGTGATGCTCACTCCTGTTC+AGG | 0.266539 | 8_2:-60063344 | Msa1258800:CDS |
| ACACTTGCTTCTAGAGGATT+TGG | 0.284180 | 8_2:+60063705 | None:intergenic |
| CCCTGAGAATGATATGTTTA+GGG | 0.285937 | 8_2:-60064749 | Msa1258800:CDS |
| CTTGGTACTGTCCTGTATCT+TGG | 0.317927 | 8_2:-60065878 | Msa1258800:five_prime_UTR |
| TCTTCGTCGCCTCTCTTATA+CGG | 0.333768 | 8_2:-60065726 | Msa1258800:CDS |
| ACCCTGAGAATGATATGTTT+AGG | 0.338391 | 8_2:-60064750 | Msa1258800:CDS |
| TCTCTAGAGCAATGCACTTC+AGG | 0.339242 | 8_2:+60065109 | None:intergenic |
| AGGAGTGAGCATCACAAAAT+TGG | 0.344243 | 8_2:+60063351 | None:intergenic |
| GGGTTTGTGTTTCCCTGAAC+AGG | 0.363706 | 8_2:+60063331 | None:intergenic |
| TTGTACATTTAGCTATCAAT+TGG | 0.365066 | 8_2:-60061498 | Msa1258800:three_prime_UTR |
| ATTAATTAAGTAATAATTTG+TGG | 0.383090 | 8_2:+60065907 | None:intergenic |
| TTTGAGATTAGCCGTGAATA+AGG | 0.383996 | 8_2:-60065833 | Msa1258800:five_prime_UTR |
| TCTTTATTTATTTGATGAAA+AGG | 0.392404 | 8_2:-60062789 | Msa1258800:intron |
| CTTTGTCTTCCATCCAGCTC+TGG | 0.423212 | 8_2:+60062649 | None:intergenic |
| CCAAGGAAGTTTCTTTCGCC+TGG | 0.424245 | 8_2:-60062854 | Msa1258800:CDS |
| TCCCTAAACATATCATTCTC+AGG | 0.425069 | 8_2:+60064748 | None:intergenic |
| AAATGCTTCGCTGATTTATG+TGG | 0.425702 | 8_2:-60063757 | Msa1258800:CDS |
| TTATAGTAGGAATCTTAAAC+AGG | 0.430837 | 8_2:-60065146 | Msa1258800:intron |
| CCATCAGCAAGCCGTCTTCA+TGG | 0.441147 | 8_2:-60063525 | Msa1258800:intron |
| AGATCAATGCTCCGGCGGCC+AGG | 0.444945 | 8_2:+60062836 | None:intergenic |
| GTGATGCTCACTCCTGTTCA+GGG | 0.446768 | 8_2:-60063343 | Msa1258800:CDS |
| TTCATACCCTTCACTACCTC+AGG | 0.450533 | 8_2:+60061547 | None:intergenic |
| GTGACTGTGAGAATGGTTAA+TGG | 0.454339 | 8_2:+60061441 | None:intergenic |
| AAGCCATCATGATTGCTGTT+TGG | 0.455233 | 8_2:-60062629 | Msa1258800:intron |
| ACTTAAAATATTAAAATAGA+AGG | 0.458842 | 8_2:-60061321 | Msa1258800:three_prime_UTR |
| TACCTTGCCTCCTCTAGAGA+AGG | 0.465652 | 8_2:+60063310 | None:intergenic |
| CAGTCATCATCTATGATGAA+TGG | 0.466304 | 8_2:-60061728 | Msa1258800:three_prime_UTR |
| TGTACATTTAGCTATCAATT+GGG | 0.467415 | 8_2:-60061497 | Msa1258800:three_prime_UTR |
| AAGTAATTCGACCAAGATAC+AGG | 0.474640 | 8_2:+60065867 | None:intergenic |
| ATGCAGAGAGAATCTACTTC+GGG | 0.477536 | 8_2:+60061657 | None:intergenic |
| GAAGACACGAATTGCTGAAA+AGG | 0.480571 | 8_2:+60065744 | None:intergenic |
| ATTGCTCTAGAGAGAGAAGC+AGG | 0.482407 | 8_2:-60065099 | Msa1258800:CDS |
| AGTTTCTTTCGCCTGGCCGC+CGG | 0.484275 | 8_2:-60062847 | Msa1258800:CDS |
| ATGAATGGGTTTACAAAAGT+GGG | 0.484319 | 8_2:-60061713 | Msa1258800:three_prime_UTR |
| TACATCAGTGACTGTGAGAA+TGG | 0.493325 | 8_2:+60061434 | None:intergenic |
| AATGTTGCTTCAGGTTTATG+TGG | 0.496176 | 8_2:-60065534 | Msa1258800:intron |
| GATGAATGGGTTTACAAAAG+TGG | 0.496917 | 8_2:-60061714 | Msa1258800:three_prime_UTR |
| AGTCACTGATGTAAGCTGTT+TGG | 0.498012 | 8_2:-60061424 | Msa1258800:three_prime_UTR |
| CTTCGTCGCATCTCCAGAGC+TGG | 0.498575 | 8_2:-60062662 | Msa1258800:CDS |
| AGTCATCATCTATGATGAAT+GGG | 0.499018 | 8_2:-60061727 | Msa1258800:three_prime_UTR |
| ACCTTGCCTCCTCTAGAGAA+GGG | 0.500327 | 8_2:+60063311 | None:intergenic |
| AAGTATTGAGAATAGAAGAA+TGG | 0.505075 | 8_2:+60065767 | None:intergenic |
| GAAAGTCCAAAATCAACATT+AGG | 0.507943 | 8_2:+60061680 | None:intergenic |
| CATACATGTTGGAATTACAT+TGG | 0.510321 | 8_2:-60061370 | Msa1258800:three_prime_UTR |
| CCAGGCGAAAGAAACTTCCT+TGG | 0.523878 | 8_2:+60062854 | None:intergenic |
| CACAAAGCATTCATACATGT+TGG | 0.524403 | 8_2:-60061381 | Msa1258800:three_prime_UTR |
| GTAGTATTTGACACCATTTG+TGG | 0.525738 | 8_2:-60064812 | Msa1258800:intron |
| GGTTGCTTCGAAAGTGATAG+AGG | 0.525753 | 8_2:-60065077 | Msa1258800:CDS |
| CCATGAAGACGGCTTGCTGA+TGG | 0.527181 | 8_2:+60063525 | None:intergenic |
| AATGCTTCGCTGATTTATGT+GGG | 0.533259 | 8_2:-60063756 | Msa1258800:CDS |
| ATGTGGAATCTTCTGGTGAA+AGG | 0.536305 | 8_2:-60065517 | Msa1258800:intron |
| TGGATTACACTTGCTTCTAG+AGG | 0.538171 | 8_2:+60063699 | None:intergenic |
| CTCTCTGCATGTCTGTGTCA+AGG | 0.545399 | 8_2:-60061644 | Msa1258800:three_prime_UTR |
| ATAACTGTGACCTTCTTCAT+CGG | 0.546667 | 8_2:+60065795 | None:intergenic |
| CACATTTCCTGAGGTAGTGA+AGG | 0.549990 | 8_2:-60061554 | Msa1258800:three_prime_UTR |
| TTTAATTGTGATCAGGGCCA+AGG | 0.550666 | 8_2:-60062871 | Msa1258800:intron |
| TTTATCTAGACAGAAATGAA+TGG | 0.558782 | 8_2:-60064708 | Msa1258800:CDS |
| GTCGCATCTCCAGAGCTGGA+TGG | 0.564944 | 8_2:-60062658 | Msa1258800:CDS |
| GTATCTTGGTCGAATTACTT+CGG | 0.566006 | 8_2:-60065864 | Msa1258800:five_prime_UTR |
| AGGAAATGTGTGTTAGACAT+TGG | 0.567455 | 8_2:+60061567 | None:intergenic |
| TAGCACTAAGATCAATGCTC+CGG | 0.569538 | 8_2:+60062828 | None:intergenic |
| AATAGAGTAACCGATGAAGA+AGG | 0.573511 | 8_2:-60065805 | Msa1258800:exon |
| ACCCTTCTCTAGAGGAGGCA+AGG | 0.573782 | 8_2:-60063312 | Msa1258800:intron |
| CCCTAAACATATCATTCTCA+GGG | 0.574589 | 8_2:+60064749 | None:intergenic |
| CATGCAGAGAGAATCTACTT+CGG | 0.589297 | 8_2:+60061656 | None:intergenic |
| AAGCAACCTCACATAGGTGG+CGG | 0.589933 | 8_2:+60063659 | None:intergenic |
| AAGGAAATCAAACTTCGCAT+TGG | 0.592555 | 8_2:-60061591 | Msa1258800:three_prime_UTR |
| TGCATGTCTGTGTCAAGGAA+AGG | 0.592977 | 8_2:-60061639 | Msa1258800:three_prime_UTR |
| CACAAACCCTTCTCTAGAGG+AGG | 0.602598 | 8_2:-60063317 | Msa1258800:CDS |
| GAAGTATTATGAGTGCATGA+AGG | 0.605899 | 8_2:-60061610 | Msa1258800:three_prime_UTR |
| ACCTGGTTTCCGTATAAGAG+AGG | 0.612721 | 8_2:+60065717 | None:intergenic |
| AAATTAAAGCAACCTCACAT+AGG | 0.622173 | 8_2:+60063653 | None:intergenic |
| GCCTCTCTTATACGGAAACC+AGG | 0.623097 | 8_2:-60065718 | Msa1258800:intron |
| TTAATTTGAATACAGAGTCA+CGG | 0.624981 | 8_2:-60063781 | Msa1258800:intron |
| AAACACAAACCCTTCTCTAG+AGG | 0.625387 | 8_2:-60063320 | Msa1258800:CDS |
| TTACCAAACAGCAATCATGA+TGG | 0.638173 | 8_2:+60062626 | None:intergenic |
| ATATAAGTATACCATGAAGA+CGG | 0.640466 | 8_2:+60063514 | None:intergenic |
| ATGTATGAATGCTTTGTGCG+TGG | 0.643967 | 8_2:+60061386 | None:intergenic |
| TTAAAGCAACCTCACATAGG+TGG | 0.645783 | 8_2:+60063656 | None:intergenic |
| ACATTTCCTGAGGTAGTGAA+GGG | 0.651518 | 8_2:-60061553 | Msa1258800:three_prime_UTR |
| ATGCTTCGCTGATTTATGTG+GGG | 0.654468 | 8_2:-60063755 | Msa1258800:CDS |
| CACTAAGATCAATGCTCCGG+CGG | 0.665181 | 8_2:+60062831 | None:intergenic |
| GACAGAAATGAATGGCGATG+TGG | 0.677495 | 8_2:-60064700 | Msa1258800:CDS |
| TAAATAAAGAGATAGAACAC+AGG | 0.680639 | 8_2:+60062802 | None:intergenic |
| TTGCTCTAGAGAGAGAAGCA+GGG | 0.684514 | 8_2:-60065098 | Msa1258800:CDS |
| AAGAAACCGCCACCTATGTG+AGG | 0.686960 | 8_2:-60063665 | Msa1258800:intron |
| TGCAGAGAGAATCTACTTCG+GGG | 0.700354 | 8_2:+60061658 | None:intergenic |
| TGCTTCGAAAGTGATAGAGG+AGG | 0.706489 | 8_2:-60065074 | Msa1258800:intron |
| TGTCTAACACACATTTCCTG+AGG | 0.708645 | 8_2:-60061563 | Msa1258800:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAAGTAATAATTTG+TGG | + | chr8_2:60061368-60061387 | None:intergenic | 10.0% |
| !!! | ATTTTAGTAATTTTAACATT+GGG | - | chr8_2:60063342-60063361 | Msa1258800:CDS | 10.0% |
| !!! | TATACTTATATTTTCTTTTT+CGG | - | chr8_2:60063770-60063789 | Msa1258800:intron | 10.0% |
| !! | TTATAATTAAAATAAGCTTA+AGG | + | chr8_2:60065213-60065232 | None:intergenic | 10.0% |
| !! | ACTTAAAATATTAAAATAGA+AGG | - | chr8_2:60065951-60065970 | Msa1258800:five_prime_UTR | 10.0% |
| !! | TACTTAATTAATAAACTTCT+TGG | - | chr8_2:60061376-60061395 | Msa1258800:three_prime_UTR | 15.0% |
| !! | TTTCAAAAGAAAAAAAACAA+AGG | + | chr8_2:60061720-60061739 | None:intergenic | 15.0% |
| !!! | CATTTTAATTTCTAAATGTT+TGG | - | chr8_2:60061804-60061823 | Msa1258800:intron | 15.0% |
| !! | AAAATTATTACGATTGAAAA+AGG | + | chr8_2:60062234-60062253 | None:intergenic | 15.0% |
| !!! | TTTCAATCGTAATAATTTTA+TGG | - | chr8_2:60062235-60062254 | Msa1258800:intron | 15.0% |
| !! | AACATTTAGATGTAATAATT+AGG | - | chr8_2:60062356-60062375 | Msa1258800:intron | 15.0% |
| !! | AATACTACAAAAACATATAT+AGG | + | chr8_2:60062448-60062467 | None:intergenic | 15.0% |
| !! | TTGCAGAAATAAAAATTAAT+AGG | + | chr8_2:60062805-60062824 | None:intergenic | 15.0% |
| !!! | CATTTTAGTAATTTTAACAT+TGG | - | chr8_2:60063341-60063360 | Msa1258800:CDS | 15.0% |
| !! | ATTTGTTTCAAAAAAAGTAA+AGG | + | chr8_2:60064234-60064253 | None:intergenic | 15.0% |
| !! | TATTTATTTAATTGTGATCA+GGG | - | chr8_2:60064395-60064414 | Msa1258800:intron | 15.0% |
| !!! | TCTTTATTTATTTGATGAAA+AGG | - | chr8_2:60064483-60064502 | Msa1258800:intron | 15.0% |
| !!! | TCTTTTAAATTGTTATCTTT+TGG | - | chr8_2:60064677-60064696 | Msa1258800:CDS | 15.0% |
| !!! | CTTTAATTCAGCTTTTTAAT+AGG | + | chr8_2:60061337-60061356 | None:intergenic | 20.0% |
| !!! | TTCACTATTTGATTTTGAAT+TGG | + | chr8_2:60061598-60061617 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAAGGTTAACT+TGG | + | chr8_2:60061711-60061730 | None:intergenic | 20.0% |
| !!! | TTTCAAGTGACAAAAAAAAA+AGG | - | chr8_2:60061828-60061847 | Msa1258800:intron | 20.0% |
| !! | TTAATATTTACTACATTCCT+AGG | + | chr8_2:60063078-60063097 | None:intergenic | 20.0% |
| !! | ATAAAGAATGCATATAGATT+AGG | + | chr8_2:60063684-60063703 | None:intergenic | 20.0% |
| !! | ATAACGAAAACAAATTTAAC+CGG | + | chr8_2:60064004-60064023 | None:intergenic | 20.0% |
| !!! | AGGAAGCTTTTATAATTTTT+AGG | - | chr8_2:60064271-60064290 | Msa1258800:intron | 20.0% |
| !! | CTGATCACAATTAAATAAAT+AGG | + | chr8_2:60064396-60064415 | None:intergenic | 20.0% |
| !! | CTATTTATTTAATTGTGATC+AGG | - | chr8_2:60064394-60064413 | Msa1258800:intron | 20.0% |
| !! | AAATTGCCATTAATAAACAA+TGG | - | chr8_2:60064734-60064753 | Msa1258800:CDS | 20.0% |
| !! | ACAAATCCATTGTTTATTAA+TGG | + | chr8_2:60064743-60064762 | None:intergenic | 20.0% |
| !! | GTTAACTGAATTACTTAAAT+TGG | + | chr8_2:60065135-60065154 | None:intergenic | 20.0% |
| !! | TAGAAAAAATAAGCAATCTA+TGG | + | chr8_2:60065182-60065201 | None:intergenic | 20.0% |
| !!! | AGATTGCTTATTTTTTCTAA+TGG | - | chr8_2:60065183-60065202 | Msa1258800:intron | 20.0% |
| !! | CCTAATATTGATGAATAAAT+TGG | + | chr8_2:60065388-60065407 | None:intergenic | 20.0% |
| !! | CCAATTTATTCATCAATATT+AGG | - | chr8_2:60065385-60065404 | Msa1258800:intron | 20.0% |
| !!! | AAGTATTGAGAATAGAAGAA+TGG | + | chr8_2:60061508-60061527 | None:intergenic | 25.0% |
| ! | TTTGAATTGGAAATTCATTC+AGG | + | chr8_2:60061585-60061604 | None:intergenic | 25.0% |
| !!! | ATAAAAAAGAGTGCTATGTA+AGG | + | chr8_2:60062110-60062129 | None:intergenic | 25.0% |
| !!! | ATAGCACTCTTTTTTATAGT+AGG | - | chr8_2:60062113-60062132 | Msa1258800:intron | 25.0% |
| ! | TTATAGTAGGAATCTTAAAC+AGG | - | chr8_2:60062126-60062145 | Msa1258800:intron | 25.0% |
| !! | GTAATAATTTTATGGCATTG+AGG | - | chr8_2:60062243-60062262 | Msa1258800:intron | 25.0% |
| !! | TAGTTTTCTTTTTCCACAAA+TGG | + | chr8_2:60062476-60062495 | None:intergenic | 25.0% |
| ! | TTTATCTAGACAGAAATGAA+TGG | - | chr8_2:60062564-60062583 | Msa1258800:intron | 25.0% |
| !! | GATCAAGAAATTTTTCTTCA+CGG | + | chr8_2:60062616-60062635 | None:intergenic | 25.0% |
| !!! | TTGATCAACATTTTGATAAC+AGG | - | chr8_2:60062630-60062649 | Msa1258800:exon | 25.0% |
| !! | CTCTTATCTTATGTTTCTTT+TGG | - | chr8_2:60062707-60062726 | Msa1258800:intron | 25.0% |
| !! | TAAGAGTATAGAATTGCATT+TGG | + | chr8_2:60062830-60062849 | None:intergenic | 25.0% |
| ! | AAATGCAATTCTATACTCTT+AGG | - | chr8_2:60062829-60062848 | Msa1258800:CDS | 25.0% |
| ! | AATGCAATTCTATACTCTTA+GGG | - | chr8_2:60062830-60062849 | Msa1258800:CDS | 25.0% |
| ! | AAAAATCATTCCCAAGAATA+TGG | - | chr8_2:60062873-60062892 | Msa1258800:intron | 25.0% |
| ! | TTTGTAACTTCCATATTCTT+GGG | + | chr8_2:60062886-60062905 | None:intergenic | 25.0% |
| ! | AATATGGAAGTTACAAAGAA+GGG | - | chr8_2:60062889-60062908 | Msa1258800:intron | 25.0% |
| ! | TTTCTTGGGAATAAAAACAT+GGG | + | chr8_2:60062975-60062994 | None:intergenic | 25.0% |
| !! | TTTTCTTGGGAATAAAAACA+TGG | + | chr8_2:60062976-60062995 | None:intergenic | 25.0% |
| !!! | TGTTTTTATTCCCAAGAAAA+TGG | - | chr8_2:60062976-60062995 | Msa1258800:intron | 25.0% |
| ! | TAGGATTATTTGTAAACATG+GGG | + | chr8_2:60063059-60063078 | None:intergenic | 25.0% |
| ! | CTAGGATTATTTGTAAACAT+GGG | + | chr8_2:60063060-60063079 | None:intergenic | 25.0% |
| !! | TTAATTTGAATACAGAGTCA+CGG | - | chr8_2:60063491-60063510 | Msa1258800:intron | 25.0% |
| ! | ATATAAGTATACCATGAAGA+CGG | + | chr8_2:60063761-60063780 | None:intergenic | 25.0% |
| !! | ATTGATTAGTTCAGTAATAC+AGG | - | chr8_2:60064044-60064063 | Msa1258800:intron | 25.0% |
| !! | TTGATTAGTTCAGTAATACA+GGG | - | chr8_2:60064045-60064064 | Msa1258800:intron | 25.0% |
| !!! | TTACTTGAATGGTTGATTTT+TGG | - | chr8_2:60064160-60064179 | Msa1258800:intron | 25.0% |
| ! | TAAATAAAGAGATAGAACAC+AGG | + | chr8_2:60064473-60064492 | None:intergenic | 25.0% |
| ! | TATTGCTGAAAAATCTTGAT+TGG | + | chr8_2:60064539-60064558 | None:intergenic | 25.0% |
| !!! | TTATCTTTTGGTTATTTGCA+TGG | - | chr8_2:60064689-60064708 | Msa1258800:CDS | 25.0% |
| ! | GTACATGTAAAAGAAAACTT+AGG | + | chr8_2:60064828-60064847 | None:intergenic | 25.0% |
| ! | AGAAAATAAGACCAATAATG+AGG | + | chr8_2:60064887-60064906 | None:intergenic | 25.0% |
| ! | AAAATACACACAATAACCAA+TGG | + | chr8_2:60065004-60065023 | None:intergenic | 25.0% |
| ! | CATGGTAGAAGTAAAATTTA+AGG | + | chr8_2:60065244-60065263 | None:intergenic | 25.0% |
| ! | TGAGTAAAGTAAAAGTCATT+AGG | + | chr8_2:60065470-60065489 | None:intergenic | 25.0% |
| ! | TTGTACATTTAGCTATCAAT+TGG | - | chr8_2:60065774-60065793 | Msa1258800:CDS | 25.0% |
| ! | TGTACATTTAGCTATCAATT+GGG | - | chr8_2:60065775-60065794 | Msa1258800:CDS | 25.0% |
| ! | TCTATTTTCGACCTTATTCA+CGG | + | chr8_2:60061453-60061472 | None:intergenic | 30.0% |
| !!! | TTCTTTTGAAATGTTGCTTC+AGG | - | chr8_2:60061729-60061748 | Msa1258800:three_prime_UTR | 30.0% |
| TTTACAAAGTCGCTTATAAC+TGG | + | chr8_2:60061902-60061921 | None:intergenic | 30.0% | |
| !! | AATTTTATGGCATTGAGGTA+TGG | - | chr8_2:60062248-60062267 | Msa1258800:intron | 30.0% |
| !!! | TTATTTTAGTGCCTTGAATC+AGG | - | chr8_2:60062312-60062331 | Msa1258800:intron | 30.0% |
| TAATACCTGTAAGGTAATAC+TGG | + | chr8_2:60062752-60062771 | None:intergenic | 30.0% | |
| AGAAAACAGTAATACCTGTA+AGG | + | chr8_2:60062761-60062780 | None:intergenic | 30.0% | |
| ATGCAATTCTATACTCTTAG+GGG | - | chr8_2:60062831-60062850 | Msa1258800:CDS | 30.0% | |
| CTTTGTAACTTCCATATTCT+TGG | + | chr8_2:60062887-60062906 | None:intergenic | 30.0% | |
| GAATATGGAAGTTACAAAGA+AGG | - | chr8_2:60062888-60062907 | Msa1258800:intron | 30.0% | |
| TGGGAAGTTATTTAATTCCT+GGG | + | chr8_2:60062949-60062968 | None:intergenic | 30.0% | |
| ATGGGAAGTTATTTAATTCC+TGG | + | chr8_2:60062950-60062969 | None:intergenic | 30.0% | |
| GGAATAAAAACATGGGAAAT+GGG | + | chr8_2:60062968-60062987 | None:intergenic | 30.0% | |
| TTTATTCCCAAGAAAATGGA+CGG | - | chr8_2:60062980-60062999 | Msa1258800:intron | 30.0% | |
| GGAATAAAATATTCCCATGA+AGG | - | chr8_2:60063002-60063021 | Msa1258800:intron | 30.0% | |
| ATAAAATATTCCCATGAAGG+TGG | - | chr8_2:60063005-60063024 | Msa1258800:intron | 30.0% | |
| TAAAATATTCCCATGAAGGT+GGG | - | chr8_2:60063006-60063025 | Msa1258800:intron | 30.0% | |
| TTTGTAAACATGGGGAATAT+AGG | + | chr8_2:60063051-60063070 | None:intergenic | 30.0% | |
| CCTAGGATTATTTGTAAACA+TGG | + | chr8_2:60063061-60063080 | None:intergenic | 30.0% | |
| CCATGTTTACAAATAATCCT+AGG | - | chr8_2:60063058-60063077 | Msa1258800:intron | 30.0% | |
| AAAGTAAACTTATGAGAGAG+CGG | + | chr8_2:60063202-60063221 | None:intergenic | 30.0% | |
| !! | AGCATTGCACTTTTTATAAG+AGG | + | chr8_2:60063262-60063281 | None:intergenic | 30.0% |
| !! | AGTAATTTTAACATTGGGTG+TGG | - | chr8_2:60063347-60063366 | Msa1258800:CDS | 30.0% |
| TAAACTCAAAACAGACTTGT+TGG | - | chr8_2:60063376-60063395 | Msa1258800:intron | 30.0% | |
| AAATTAAAGCAACCTCACAT+AGG | + | chr8_2:60063622-60063641 | None:intergenic | 30.0% | |
| !! | AGTTGTTTTCCTATAAGTGA+GGG | - | chr8_2:60063723-60063742 | Msa1258800:CDS | 30.0% |
| AAAATGTAGTGACATCATTG+TGG | + | chr8_2:60063810-60063829 | None:intergenic | 30.0% | |
| ! | TTCTTATGTTGATTGTGCAT+TGG | - | chr8_2:60063882-60063901 | Msa1258800:intron | 30.0% |
| CCATTCAAGTAATGTCAATA+AGG | + | chr8_2:60064152-60064171 | None:intergenic | 30.0% | |
| CCTTATTGACATTACTTGAA+TGG | - | chr8_2:60064149-60064168 | Msa1258800:intron | 30.0% | |
| AGCAATATCTCAAAACTGTT+GGG | - | chr8_2:60064552-60064571 | Msa1258800:intron | 30.0% | |
| TGAAATGAAGAAAGAAGGAT+TGG | + | chr8_2:60064805-60064824 | None:intergenic | 30.0% | |
| TTAGGTGAAATGAAGAAAGA+AGG | + | chr8_2:60064810-60064829 | None:intergenic | 30.0% | |
| TACTTTCTATGCCTCATTAT+TGG | - | chr8_2:60064873-60064892 | Msa1258800:intron | 30.0% | |
| ATCAGAACTTTAATGTCTGT+CGG | + | chr8_2:60064967-60064986 | None:intergenic | 30.0% | |
| AATAAATTGGAGAACTGGTA+CGG | + | chr8_2:60065375-60065394 | None:intergenic | 30.0% | |
| TGATGAATAAATTGGAGAAC+TGG | + | chr8_2:60065380-60065399 | None:intergenic | 30.0% | |
| GTAAAGTAAAAGTCATTAGG+CGG | + | chr8_2:60065467-60065486 | None:intergenic | 30.0% | |
| AAAGAGTTACACATGATAAG+AGG | + | chr8_2:60065501-60065520 | None:intergenic | 30.0% | |
| ! | TGTAACTCTTTTACTTATGC+AGG | - | chr8_2:60065510-60065529 | Msa1258800:intron | 30.0% |
| AGTCATCATCTATGATGAAT+GGG | - | chr8_2:60065545-60065564 | Msa1258800:intron | 30.0% | |
| ! | ATGAATGGGTTTACAAAAGT+GGG | - | chr8_2:60065559-60065578 | Msa1258800:intron | 30.0% |
| !!! | GTAATGCCTAATGTTGATTT+TGG | - | chr8_2:60065586-60065605 | Msa1258800:intron | 30.0% |
| GAAAGTCCAAAATCAACATT+AGG | + | chr8_2:60065595-60065614 | None:intergenic | 30.0% | |
| CATACATGTTGGAATTACAT+TGG | - | chr8_2:60065902-60065921 | Msa1258800:five_prime_UTR | 30.0% | |
| AAGTAATTCGACCAAGATAC+AGG | + | chr8_2:60061408-60061427 | None:intergenic | 35.0% | |
| GTATCTTGGTCGAATTACTT+CGG | - | chr8_2:60061408-60061427 | Msa1258800:three_prime_UTR | 35.0% | |
| ! | TTTGAGATTAGCCGTGAATA+AGG | - | chr8_2:60061439-60061458 | Msa1258800:three_prime_UTR | 35.0% |
| AATAGAGTAACCGATGAAGA+AGG | - | chr8_2:60061467-60061486 | Msa1258800:three_prime_UTR | 35.0% | |
| ATAACTGTGACCTTCTTCAT+CGG | + | chr8_2:60061480-60061499 | None:intergenic | 35.0% | |
| ! | AAATTCATTCAGGTGTTACC+TGG | + | chr8_2:60061575-60061594 | None:intergenic | 35.0% |
| ! | AATGTTGCTTCAGGTTTATG+TGG | - | chr8_2:60061738-60061757 | Msa1258800:three_prime_UTR | 35.0% |
| AATCTTCTGGTGAAAGGTAA+TGG | - | chr8_2:60061761-60061780 | Msa1258800:intron | 35.0% | |
| !!! | TGTATGTTTGGTTCTGCTTT+TGG | + | chr8_2:60061991-60062010 | None:intergenic | 35.0% |
| ACAAAAGCTACGTGTATGTT+TGG | + | chr8_2:60062003-60062022 | None:intergenic | 35.0% | |
| GATAACGAAGAAGATTGCTT+CGG | + | chr8_2:60062055-60062074 | None:intergenic | 35.0% | |
| AATCATGTGAGACAAGCTAA+GGG | + | chr8_2:60062077-60062096 | None:intergenic | 35.0% | |
| TAATCATGTGAGACAAGCTA+AGG | + | chr8_2:60062078-60062097 | None:intergenic | 35.0% | |
| TAGACATATGTCCTGATTCA+AGG | + | chr8_2:60062326-60062345 | None:intergenic | 35.0% | |
| TTGAATCAGGACATATGTCT+AGG | - | chr8_2:60062325-60062344 | Msa1258800:intron | 35.0% | |
| GTAGTATTTGACACCATTTG+TGG | - | chr8_2:60062460-60062479 | Msa1258800:intron | 35.0% | |
| ACCCTGAGAATGATATGTTT+AGG | - | chr8_2:60062522-60062541 | Msa1258800:intron | 35.0% | |
| CCCTAAACATATCATTCTCA+GGG | + | chr8_2:60062526-60062545 | None:intergenic | 35.0% | |
| CCCTGAGAATGATATGTTTA+GGG | - | chr8_2:60062523-60062542 | Msa1258800:intron | 35.0% | |
| TCCCTAAACATATCATTCTC+AGG | + | chr8_2:60062527-60062546 | None:intergenic | 35.0% | |
| TGCAATTCTATACTCTTAGG+GGG | - | chr8_2:60062832-60062851 | Msa1258800:CDS | 35.0% | |
| ! | TGGGAATGATTTTTACAACC+AGG | + | chr8_2:60062867-60062886 | None:intergenic | 35.0% |
| !! | CCTAGCTTTGTAACAAACAT+AGG | + | chr8_2:60062917-60062936 | None:intergenic | 35.0% |
| ! | CCTATGTTTGTTACAAAGCT+AGG | - | chr8_2:60062914-60062933 | Msa1258800:intron | 35.0% |
| AAGCTAGGATATTAATTCCC+AGG | - | chr8_2:60062929-60062948 | Msa1258800:intron | 35.0% | |
| GGGAATAAAAACATGGGAAA+TGG | + | chr8_2:60062969-60062988 | None:intergenic | 35.0% | |
| TTATTCCCAAGAAAATGGAC+GGG | - | chr8_2:60062981-60063000 | Msa1258800:intron | 35.0% | |
| ! | TTATTCCCGTCCATTTTCTT+GGG | + | chr8_2:60062989-60063008 | None:intergenic | 35.0% |
| ! | TTTATTCCCGTCCATTTTCT+TGG | + | chr8_2:60062990-60063009 | None:intergenic | 35.0% |
| AAAATATTCCCATGAAGGTG+GGG | - | chr8_2:60063007-60063026 | Msa1258800:intron | 35.0% | |
| ! | ACTTGTTGGAAGCTTAAGTT+TGG | - | chr8_2:60063390-60063409 | Msa1258800:intron | 35.0% |
| CCATACGAGTAATGAAATTG+TGG | + | chr8_2:60063471-60063490 | None:intergenic | 35.0% | |
| CCACAATTTCATTACTCGTA+TGG | - | chr8_2:60063468-60063487 | Msa1258800:intron | 35.0% | |
| !! | AAATGCTTCGCTGATTTATG+TGG | - | chr8_2:60063515-60063534 | Msa1258800:intron | 35.0% |
| !! | AATGCTTCGCTGATTTATGT+GGG | - | chr8_2:60063516-60063535 | Msa1258800:intron | 35.0% |
| !! | CAGTTGTTTTCCTATAAGTG+AGG | - | chr8_2:60063722-60063741 | Msa1258800:CDS | 35.0% |
| ATTTAACCGGTGAGATAATC+AGG | + | chr8_2:60063991-60064010 | None:intergenic | 35.0% | |
| ! | TATCTGTGTTGTGAGGTTTT+AGG | - | chr8_2:60064092-60064111 | Msa1258800:intron | 35.0% |
| TCAACTTTGTGAATAGCACA+AGG | + | chr8_2:60064118-60064137 | None:intergenic | 35.0% | |
| !! | AATGTCTTTCCTTTTCTAGC+AGG | - | chr8_2:60064251-60064270 | Msa1258800:intron | 35.0% |
| TAAAAGCTTCCTGCTAGAAA+AGG | + | chr8_2:60064263-60064282 | None:intergenic | 35.0% | |
| !! | CCACAGTTTCTGAAGATTTT+GGG | - | chr8_2:60064337-60064356 | Msa1258800:intron | 35.0% |
| CAGCAATATCTCAAAACTGT+TGG | - | chr8_2:60064551-60064570 | Msa1258800:intron | 35.0% | |
| TTACCAAACAGCAATCATGA+TGG | + | chr8_2:60064649-60064668 | None:intergenic | 35.0% | |
| AGAAAGAAGGATTGGAAAAC+AGG | + | chr8_2:60064797-60064816 | None:intergenic | 35.0% | |
| GTACATTGTCCAAAGAGAAA+TGG | - | chr8_2:60064937-60064956 | Msa1258800:intron | 35.0% | |
| ! | TAAAGTTCTGATGTCGACTA+TGG | - | chr8_2:60064975-60064994 | Msa1258800:intron | 35.0% |
| AAGAGAGAGATTAGCATGTA+TGG | - | chr8_2:60065059-60065078 | Msa1258800:intron | 35.0% | |
| TGGTCACTCATTTGAGAATA+AGG | + | chr8_2:60065162-60065181 | None:intergenic | 35.0% | |
| ! | CTTCTACCATGCACATTTTA+TGG | - | chr8_2:60065253-60065272 | Msa1258800:intron | 35.0% |
| ATACCTCCATAAAATGTGCA+TGG | + | chr8_2:60065262-60065281 | None:intergenic | 35.0% | |
| AGACTACATGTATTCTCAAC+TGG | - | chr8_2:60065330-60065349 | Msa1258800:intron | 35.0% | |
| CAGTCATCATCTATGATGAA+TGG | - | chr8_2:60065544-60065563 | Msa1258800:intron | 35.0% | |
| ! | GATGAATGGGTTTACAAAAG+TGG | - | chr8_2:60065558-60065577 | Msa1258800:intron | 35.0% |
| ! | GAAGTATTATGAGTGCATGA+AGG | - | chr8_2:60065662-60065681 | Msa1258800:intron | 35.0% |
| AAGGAAATCAAACTTCGCAT+TGG | - | chr8_2:60065681-60065700 | Msa1258800:intron | 35.0% | |
| AGGAAATGTGTGTTAGACAT+TGG | + | chr8_2:60065708-60065727 | None:intergenic | 35.0% | |
| ! | CACAAAGCATTCATACATGT+TGG | - | chr8_2:60065891-60065910 | Msa1258800:five_prime_UTR | 35.0% |
| GAAGACACGAATTGCTGAAA+AGG | + | chr8_2:60061531-60061550 | None:intergenic | 40.0% | |
| CAGGTTTATGTGGAATCTTC+TGG | - | chr8_2:60061748-60061767 | Msa1258800:intron | 40.0% | |
| ATGTGGAATCTTCTGGTGAA+AGG | - | chr8_2:60061755-60061774 | Msa1258800:intron | 40.0% | |
| !! | TCTGGTGAAAGGTAATGGAA+TGG | - | chr8_2:60061766-60061785 | Msa1258800:intron | 40.0% |
| !!! | ATGTTTGGTTCTGCTTTTGG+AGG | + | chr8_2:60061988-60062007 | None:intergenic | 40.0% |
| ! | GAAAGTGATAGAGGAGGTAT+GGG | - | chr8_2:60062204-60062223 | Msa1258800:intron | 40.0% |
| ! | CACAGTTTTGCTCTCTAAAC+TGG | - | chr8_2:60062415-60062434 | Msa1258800:intron | 40.0% |
| TTGAGCCAGTATTACCTTAC+AGG | - | chr8_2:60062744-60062763 | Msa1258800:intron | 40.0% | |
| !! | AGTTTTATCCCCACCTTCAT+GGG | + | chr8_2:60063018-60063037 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCCACCTTCA+TGG | + | chr8_2:60063019-60063038 | None:intergenic | 40.0% |
| GTAAACATGGGGAATATAGG+TGG | + | chr8_2:60063048-60063067 | None:intergenic | 40.0% | |
| ATGGCATAGAGAGTTAGGAT+TGG | - | chr8_2:60063147-60063166 | Msa1258800:intron | 40.0% | |
| ! | ATAGAGAGTTAGGATTGGCA+GGG | - | chr8_2:60063152-60063171 | Msa1258800:intron | 40.0% |
| CAATTGTTTATTCCCACGTG+CGG | + | chr8_2:60063290-60063309 | None:intergenic | 40.0% | |
| !! | ATGCTTCGCTGATTTATGTG+GGG | - | chr8_2:60063517-60063536 | Msa1258800:intron | 40.0% |
| ! | ACACTTGCTTCTAGAGGATT+TGG | + | chr8_2:60063570-60063589 | None:intergenic | 40.0% |
| TGGATTACACTTGCTTCTAG+AGG | + | chr8_2:60063576-60063595 | None:intergenic | 40.0% | |
| TTAAAGCAACCTCACATAGG+TGG | + | chr8_2:60063619-60063638 | None:intergenic | 40.0% | |
| AGGAGTGAGCATCACAAAAT+TGG | + | chr8_2:60063924-60063943 | None:intergenic | 40.0% | |
| AAACACAAACCCTTCTCTAG+AGG | - | chr8_2:60063952-60063971 | Msa1258800:intron | 40.0% | |
| CAACACAGATACTCTATGAC+TGG | + | chr8_2:60064083-60064102 | None:intergenic | 40.0% | |
| ! | CATAGAGTATCTGTGTTGTG+AGG | - | chr8_2:60064085-60064104 | Msa1258800:intron | 40.0% |
| !! | GCCACAGTTTCTGAAGATTT+TGG | - | chr8_2:60064336-60064355 | Msa1258800:intron | 40.0% |
| CCCAAAATCTTCAGAAACTG+TGG | + | chr8_2:60064340-60064359 | None:intergenic | 40.0% | |
| TTTAATTGTGATCAGGGCCA+AGG | - | chr8_2:60064401-60064420 | Msa1258800:intron | 40.0% | |
| TAGCACTAAGATCAATGCTC+CGG | + | chr8_2:60064447-60064466 | None:intergenic | 40.0% | |
| ! | AAGCCATCATGATTGCTGTT+TGG | - | chr8_2:60064643-60064662 | Msa1258800:CDS | 40.0% |
| TGGTTATTTGCATGGCAGAA+TGG | - | chr8_2:60064697-60064716 | Msa1258800:CDS | 40.0% | |
| GGTTATTTGCATGGCAGAAT+GGG | - | chr8_2:60064698-60064717 | Msa1258800:CDS | 40.0% | |
| ! | ATGTCGACTATGGTATCCAT+TGG | - | chr8_2:60064985-60065004 | Msa1258800:intron | 40.0% |
| ! | CTACCATGCACATTTTATGG+AGG | - | chr8_2:60065256-60065275 | Msa1258800:intron | 40.0% |
| CTCAACTGGAATTTATGACC+AGG | - | chr8_2:60065344-60065363 | Msa1258800:intron | 40.0% | |
| ! | AGCATAACTTTGAGAGAGCA+GGG | + | chr8_2:60065444-60065463 | None:intergenic | 40.0% |
| ATGCAGAGAGAATCTACTTC+GGG | + | chr8_2:60065618-60065637 | None:intergenic | 40.0% | |
| CATGCAGAGAGAATCTACTT+CGG | + | chr8_2:60065619-60065638 | None:intergenic | 40.0% | |
| TGTCTAACACACATTTCCTG+AGG | - | chr8_2:60065709-60065728 | Msa1258800:intron | 40.0% | |
| ACATTTCCTGAGGTAGTGAA+GGG | - | chr8_2:60065719-60065738 | Msa1258800:CDS | 40.0% | |
| GTGACTGTGAGAATGGTTAA+TGG | + | chr8_2:60065834-60065853 | None:intergenic | 40.0% | |
| TACATCAGTGACTGTGAGAA+TGG | + | chr8_2:60065841-60065860 | None:intergenic | 40.0% | |
| AGTCACTGATGTAAGCTGTT+TGG | - | chr8_2:60065848-60065867 | Msa1258800:five_prime_UTR | 40.0% | |
| ATGTATGAATGCTTTGTGCG+TGG | + | chr8_2:60065889-60065908 | None:intergenic | 40.0% | |
| CTTGGTACTGTCCTGTATCT+TGG | - | chr8_2:60061394-60061413 | Msa1258800:three_prime_UTR | 45.0% | |
| TCTTCGTCGCCTCTCTTATA+CGG | - | chr8_2:60061546-60061565 | Msa1258800:three_prime_UTR | 45.0% | |
| ACCTGGTTTCCGTATAAGAG+AGG | + | chr8_2:60061558-60061577 | None:intergenic | 45.0% | |
| !!! | TTTGGTTCTGCTTTTGGAGG+AGG | + | chr8_2:60061985-60062004 | None:intergenic | 45.0% |
| !! | TCTCTAGAGCAATGCACTTC+AGG | + | chr8_2:60062166-60062185 | None:intergenic | 45.0% |
| !! | ATTGCTCTAGAGAGAGAAGC+AGG | - | chr8_2:60062173-60062192 | Msa1258800:intron | 45.0% |
| !! | TTGCTCTAGAGAGAGAAGCA+GGG | - | chr8_2:60062174-60062193 | Msa1258800:intron | 45.0% |
| GGTTGCTTCGAAAGTGATAG+AGG | - | chr8_2:60062195-60062214 | Msa1258800:intron | 45.0% | |
| TGCTTCGAAAGTGATAGAGG+AGG | - | chr8_2:60062198-60062217 | Msa1258800:intron | 45.0% | |
| CGAAAGTGATAGAGGAGGTA+TGG | - | chr8_2:60062203-60062222 | Msa1258800:intron | 45.0% | |
| GACAGAAATGAATGGCGATG+TGG | - | chr8_2:60062572-60062591 | Msa1258800:intron | 45.0% | |
| TATGTTACCTGCCTCTCTGA+TGG | - | chr8_2:60063128-60063147 | Msa1258800:intron | 45.0% | |
| AACTCTCTATGCCATCAGAG+AGG | + | chr8_2:60063142-60063161 | None:intergenic | 45.0% | |
| CTCTGATGGCATAGAGAGTT+AGG | - | chr8_2:60063142-60063161 | Msa1258800:intron | 45.0% | |
| ! | CATAGAGAGTTAGGATTGGC+AGG | - | chr8_2:60063151-60063170 | Msa1258800:intron | 45.0% |
| ! | CTTATGAGAGAGCGGATTCA+CGG | + | chr8_2:60063194-60063213 | None:intergenic | 45.0% |
| CGCACGTGGGAATAAACAAT+TGG | - | chr8_2:60063288-60063307 | Msa1258800:intron | 45.0% | |
| GTAAGGCCTGATTATCTCAC+CGG | - | chr8_2:60063982-60064001 | Msa1258800:intron | 45.0% | |
| ! | GCATAACTTTGAGAGAGCAG+GGG | + | chr8_2:60065443-60065462 | None:intergenic | 45.0% |
| ! | GAGCATAACTTTGAGAGAGC+AGG | + | chr8_2:60065445-60065464 | None:intergenic | 45.0% |
| TGCAGAGAGAATCTACTTCG+GGG | + | chr8_2:60065617-60065636 | None:intergenic | 45.0% | |
| TGCATGTCTGTGTCAAGGAA+AGG | - | chr8_2:60065633-60065652 | Msa1258800:intron | 45.0% | |
| CACATTTCCTGAGGTAGTGA+AGG | - | chr8_2:60065718-60065737 | Msa1258800:intron | 45.0% | |
| TTCATACCCTTCACTACCTC+AGG | + | chr8_2:60065728-60065747 | None:intergenic | 45.0% | |
| GCCTCTCTTATACGGAAACC+AGG | - | chr8_2:60061554-60061573 | Msa1258800:three_prime_UTR | 50.0% | |
| !! | CTTAGGGGGTGTTTGTTTCC+TGG | - | chr8_2:60062846-60062865 | Msa1258800:CDS | 50.0% |
| CAATGCTTCTTTCCGCACGT+GGG | - | chr8_2:60063275-60063294 | Msa1258800:intron | 50.0% | |
| AAGAAACCGCCACCTATGTG+AGG | - | chr8_2:60063607-60063626 | Msa1258800:intron | 50.0% | |
| AAGCAACCTCACATAGGTGG+CGG | + | chr8_2:60063616-60063635 | None:intergenic | 50.0% | |
| ! | GCTGATGGACCCTCACTTAT+AGG | + | chr8_2:60063735-60063754 | None:intergenic | 50.0% |
| TGTGATGCTCACTCCTGTTC+AGG | - | chr8_2:60063928-60063947 | Msa1258800:intron | 50.0% | |
| GTGATGCTCACTCCTGTTCA+GGG | - | chr8_2:60063929-60063948 | Msa1258800:intron | 50.0% | |
| GGGTTTGTGTTTCCCTGAAC+AGG | + | chr8_2:60063944-60063963 | None:intergenic | 50.0% | |
| ! | CACAAACCCTTCTCTAGAGG+AGG | - | chr8_2:60063955-60063974 | Msa1258800:intron | 50.0% |
| ! | ACCTTGCCTCCTCTAGAGAA+GGG | + | chr8_2:60063964-60063983 | None:intergenic | 50.0% |
| ! | TACCTTGCCTCCTCTAGAGA+AGG | + | chr8_2:60063965-60063984 | None:intergenic | 50.0% |
| ! | TCTCTAGAGGAGGCAAGGTA+AGG | - | chr8_2:60063965-60063984 | Msa1258800:intron | 50.0% |
| AGCTAGTGTGACAGCGAGTT+TGG | + | chr8_2:60064209-60064228 | None:intergenic | 50.0% | |
| CCAGGCGAAAGAAACTTCCT+TGG | + | chr8_2:60064421-60064440 | None:intergenic | 50.0% | |
| CCAAGGAAGTTTCTTTCGCC+TGG | - | chr8_2:60064418-60064437 | Msa1258800:intron | 50.0% | |
| CACTAAGATCAATGCTCCGG+CGG | + | chr8_2:60064444-60064463 | None:intergenic | 50.0% | |
| CTTTGTCTTCCATCCAGCTC+TGG | + | chr8_2:60064626-60064645 | None:intergenic | 50.0% | |
| GTCGGCACACCATTTCTCTT+TGG | + | chr8_2:60064949-60064968 | None:intergenic | 50.0% | |
| TTTGAGAGAGCAGGGGTTAG+AGG | + | chr8_2:60065436-60065455 | None:intergenic | 50.0% | |
| CTCTCTGCATGTCTGTGTCA+AGG | - | chr8_2:60065628-60065647 | Msa1258800:intron | 50.0% | |
| CTCTATGCCATCAGAGAGGC+AGG | + | chr8_2:60063138-60063157 | None:intergenic | 55.0% | |
| ! | ATGAGAGAGCGGATTCACGG+CGG | + | chr8_2:60063191-60063210 | None:intergenic | 55.0% |
| GCAATGCTTCTTTCCGCACG+TGG | - | chr8_2:60063274-60063293 | Msa1258800:intron | 55.0% | |
| !! | CCATGAAGACGGCTTGCTGA+TGG | + | chr8_2:60063750-60063769 | None:intergenic | 55.0% |
| CCATCAGCAAGCCGTCTTCA+TGG | - | chr8_2:60063747-60063766 | Msa1258800:CDS | 55.0% | |
| ! | ACCCTTCTCTAGAGGAGGCA+AGG | - | chr8_2:60063960-60063979 | Msa1258800:intron | 55.0% |
| AGAACTGGTACGGAACAGCC+TGG | + | chr8_2:60065365-60065384 | None:intergenic | 55.0% | |
| GCAGGGGTTAGAGGACAGAA+TGG | + | chr8_2:60065427-60065446 | None:intergenic | 55.0% | |
| ! | TGAGAGAGCGGATTCACGGC+GGG | + | chr8_2:60063190-60063209 | None:intergenic | 60.0% |
| CGGTTTCTTGCAGCAGCTGC+TGG | + | chr8_2:60063596-60063615 | None:intergenic | 60.0% | |
| AGTTTCTTTCGCCTGGCCGC+CGG | - | chr8_2:60064425-60064444 | Msa1258800:intron | 60.0% | |
| CTTCGTCGCATCTCCAGAGC+TGG | - | chr8_2:60064610-60064629 | Msa1258800:intron | 60.0% | |
| GTCGCATCTCCAGAGCTGGA+TGG | - | chr8_2:60064614-60064633 | Msa1258800:intron | 60.0% | |
| ! | GAGAGAGCGGATTCACGGCG+GGG | + | chr8_2:60063189-60063208 | None:intergenic | 65.0% |
| AGATCAATGCTCCGGCGGCC+AGG | + | chr8_2:60064439-60064458 | None:intergenic | 65.0% | |
| ! | GAGCGGATTCACGGCGGGGC+AGG | + | chr8_2:60063185-60063204 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 60061310 | 60065984 | 60061310 | ID=Msa1258800;Name=Msa1258800 |
| chr8_2 | mRNA | 60061310 | 60065984 | 60061310 | ID=Msa1258800-mRNA-1;Parent=Msa1258800;Name=Msa1258800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=170|1|1|1|0.88|0.8|10|463|276 |
| chr8_2 | exon | 60061310 | 60061762 | 60061310 | ID=Msa1258800-mRNA-1:exon:18853;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60062630 | 60062709 | 60062630 | ID=Msa1258800-mRNA-1:exon:18852;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60062790 | 60062878 | 60062790 | ID=Msa1258800-mRNA-1:exon:18851;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60063313 | 60063386 | 60063313 | ID=Msa1258800-mRNA-1:exon:18850;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60063526 | 60063583 | 60063526 | ID=Msa1258800-mRNA-1:exon:18849;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60063666 | 60063788 | 60063666 | ID=Msa1258800-mRNA-1:exon:18848;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60064621 | 60064830 | 60064621 | ID=Msa1258800-mRNA-1:exon:18847;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60065075 | 60065159 | 60065075 | ID=Msa1258800-mRNA-1:exon:18846;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60065518 | 60065543 | 60065518 | ID=Msa1258800-mRNA-1:exon:18845;Parent=Msa1258800-mRNA-1 |
| chr8_2 | exon | 60065719 | 60065984 | 60065719 | ID=Msa1258800-mRNA-1:exon:18844;Parent=Msa1258800-mRNA-1 |
| chr8_2 | five_prime_UTR | 60065815 | 60065984 | 60065815 | ID=Msa1258800-mRNA-1:five_prime_utr;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60065719 | 60065814 | 60065719 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60065518 | 60065543 | 60065518 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60065075 | 60065159 | 60065075 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60064621 | 60064830 | 60064621 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60063666 | 60063788 | 60063666 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60063526 | 60063583 | 60063526 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60063313 | 60063386 | 60063313 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60062790 | 60062878 | 60062790 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | CDS | 60062640 | 60062709 | 60062640 | ID=Msa1258800-mRNA-1:cds;Parent=Msa1258800-mRNA-1 |
| chr8_2 | three_prime_UTR | 60062630 | 60062639 | 60062630 | ID=Msa1258800-mRNA-1:three_prime_utr;Parent=Msa1258800-mRNA-1 |
| chr8_2 | three_prime_UTR | 60061310 | 60061762 | 60061310 | ID=Msa1258800-mRNA-1:three_prime_utr;Parent=Msa1258800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
