Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210580 | KEH36087.1 | 83.607 | 305 | 41 | 3 | 6 | 309 | 168 | 464 | 1.62e-170 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0771720 | Msa1210580 | 0.804216 | 2.402985e-49 | -8.615850e-47 |
| Msa1210580 | Msa1293510 | 0.801577 | 8.432415e-49 | -8.615850e-47 |
| Msa1210580 | Msa1451550 | 0.805148 | 1.534986e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210580 | MtrunA17_Chr3g0140511 | 83.333 | 306 | 42 | 3 | 5 | 309 | 167 | 464 | 9.41e-174 | 493 |
| Msa1210580 | MtrunA17_Chr1g0146311 | 54.192 | 334 | 108 | 9 | 8 | 309 | 172 | 492 | 4.94e-99 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210580 | AT2G25740.2 | 43.243 | 333 | 151 | 8 | 5 | 309 | 96 | 418 | 3.49e-74 | 237 |
| Msa1210580 | AT2G25740.1 | 43.243 | 333 | 151 | 8 | 5 | 309 | 161 | 483 | 8.78e-74 | 238 |
Find 92 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGATCTTCCTCAATAATT+TGG | 0.165146 | 8_1:+69601920 | None:intergenic |
| TTCAATGCTCAAATCCAAAT+TGG | 0.214458 | 8_1:+69601633 | None:intergenic |
| GATATGTGGAAGCAAATAAT+TGG | 0.216706 | 8_1:-69600373 | Msa1210580:CDS |
| GATATGTGGAAGCAAATAAT+TGG | 0.216706 | 8_1:-69600618 | Msa1210580:CDS |
| TTTCTGAATCTACAAGCTTT+TGG | 0.233118 | 8_1:-69600524 | Msa1210580:CDS |
| TCAGGAAATAAGATCCAATT+TGG | 0.239098 | 8_1:-69601647 | Msa1210580:CDS |
| GCATCTATTAAGCTCTTCTT+TGG | 0.258670 | 8_1:+69601582 | None:intergenic |
| GGCCGTTCTTCTTAGCCTTA+TGG | 0.260847 | 8_1:-69601949 | Msa1210580:intron |
| TATCTACAGATTCGACAGTA+TGG | 0.309983 | 8_1:-69602162 | Msa1210580:intron |
| AATAATTGGGGTACCTAGTA+TGG | 0.313980 | 8_1:-69600359 | Msa1210580:CDS |
| AATAATTGGGGTACCTAGTA+TGG | 0.313980 | 8_1:-69600604 | Msa1210580:CDS |
| ATAAGATTTCAAAAGCATTC+TGG | 0.347520 | 8_1:-69601540 | Msa1210580:CDS |
| ACAGAATACAGCTGGTTTCC+TGG | 0.357284 | 8_1:-69599947 | Msa1210580:CDS |
| GACAACAACGATTTCATCTA+AGG | 0.363417 | 8_1:-69602101 | Msa1210580:CDS |
| CGCCATGCCCGACGCAGAAC+CGG | 0.366345 | 8_1:+69601717 | None:intergenic |
| GATTTCATCTAAGGCGGTCT+TGG | 0.373402 | 8_1:-69602092 | Msa1210580:CDS |
| TATCTATCAGCCATTGGTTC+CGG | 0.382289 | 8_1:-69601736 | Msa1210580:CDS |
| ATATGTGGAAGCAAATAATT+GGG | 0.386754 | 8_1:-69600372 | Msa1210580:CDS |
| ATATGTGGAAGCAAATAATT+GGG | 0.386754 | 8_1:-69600617 | Msa1210580:CDS |
| CAAAAGCATTCTGGCCCCAC+TGG | 0.387271 | 8_1:-69601531 | Msa1210580:CDS |
| TGACCTCCCTAATGGCTAAC+AGG | 0.387922 | 8_1:-69602250 | None:intergenic |
| CTCCTATTGGCTTGCACAAA+GGG | 0.398577 | 8_1:-69601491 | Msa1210580:CDS |
| AAGCTTGTAGATTCAGAAAC+AGG | 0.404971 | 8_1:+69600528 | None:intergenic |
| ATTGGTTCCGGTTCTGCGTC+GGG | 0.414906 | 8_1:-69601724 | Msa1210580:CDS |
| ATCGCATGTACGACTCCTAT+TGG | 0.443034 | 8_1:-69601504 | Msa1210580:CDS |
| CTTGGTGCCTATGTGAATCC+TGG | 0.452145 | 8_1:-69600039 | Msa1210580:CDS |
| TCACTCTCAAAATCCTCATC+TGG | 0.454325 | 8_1:+69601784 | None:intergenic |
| GGAACCAATGGCTGATAGAT+AGG | 0.462385 | 8_1:+69601738 | None:intergenic |
| TTCCGGTTCTGCGTCGGGCA+TGG | 0.467678 | 8_1:-69601719 | Msa1210580:CDS |
| GGATGACTGCTTTCCAGAAG+TGG | 0.475515 | 8_1:+69601603 | None:intergenic |
| CATTGGTTCCGGTTCTGCGT+CGG | 0.476454 | 8_1:-69601725 | Msa1210580:CDS |
| ATGTGAAATGATAAAACATC+AGG | 0.479284 | 8_1:+69600319 | None:intergenic |
| ATGTGAAATGATAAAACATC+AGG | 0.479284 | 8_1:+69600564 | None:intergenic |
| TGCAGACATGTTAAGATACA+TGG | 0.480281 | 8_1:-69601841 | Msa1210580:CDS |
| CTTCATGCATAAGTCAGATC+AGG | 0.488445 | 8_1:-69601665 | Msa1210580:CDS |
| TGCCCTTTGTGCAAGCCAAT+AGG | 0.494154 | 8_1:+69601489 | None:intergenic |
| CCAATGGCTTATCTCTCGTT+GGG | 0.496202 | 8_1:-69599979 | Msa1210580:CDS |
| GCCAATGGCTTATCTCTCGT+TGG | 0.496816 | 8_1:-69599980 | Msa1210580:CDS |
| CAGAATACAGCTGGTTTCCT+GGG | 0.503548 | 8_1:-69599946 | Msa1210580:CDS |
| ATATCGATGGCATCACATAT+AGG | 0.519147 | 8_1:-69600501 | Msa1210580:intron |
| GTGTCAAATGAGGGTCCTCT+TGG | 0.521373 | 8_1:-69600057 | Msa1210580:CDS |
| ATAATTTGGATCTCTCCATA+AGG | 0.522393 | 8_1:+69601934 | None:intergenic |
| TGGAGAGATCCAAATTATTG+AGG | 0.522653 | 8_1:-69601929 | Msa1210580:CDS |
| TTGACGAGACTATCCATACT+AGG | 0.530605 | 8_1:+69600346 | None:intergenic |
| TTGACGAGACTATCCATACT+AGG | 0.530605 | 8_1:+69600591 | None:intergenic |
| ATGAAATCGTTGTTGTCCAC+GGG | 0.533530 | 8_1:+69602107 | None:intergenic |
| CGGTCTTGGAACGACGTTGA+CGG | 0.541422 | 8_1:-69602078 | Msa1210580:CDS |
| CGACGCAGAACCGGAACCAA+TGG | 0.545211 | 8_1:+69601726 | None:intergenic |
| GATGAAATCGTTGTTGTCCA+CGG | 0.545724 | 8_1:+69602106 | None:intergenic |
| AAAAGCATTCTGGCCCCACT+GGG | 0.551775 | 8_1:-69601530 | Msa1210580:CDS |
| ACGCCCCTTGGAGTTCTCAA+TGG | 0.558248 | 8_1:+69601898 | None:intergenic |
| CAGTATGGGCGCCTAGAGGA+TGG | 0.561771 | 8_1:-69602147 | Msa1210580:CDS |
| TGAGAGTGAGCTTTCACCAA+CGG | 0.561845 | 8_1:-69601770 | Msa1210580:CDS |
| AAAACCTATCTATCAGCCAT+TGG | 0.571173 | 8_1:-69601742 | Msa1210580:CDS |
| ATCTACAGATTCGACAGTAT+GGG | 0.571244 | 8_1:-69602161 | Msa1210580:intron |
| TGATATGTTGGTGTCAAATG+AGG | 0.575569 | 8_1:-69600067 | Msa1210580:CDS |
| GACTCTTTACACAAGGCCAA+TGG | 0.576553 | 8_1:-69599995 | Msa1210580:CDS |
| GTTGATAATCTGTAGATATG+TGG | 0.578246 | 8_1:-69600387 | Msa1210580:intron |
| GTTGATAATCTGTAGATATG+TGG | 0.578246 | 8_1:-69600632 | Msa1210580:intron |
| TTGGAACGACGTTGACGGAG+TGG | 0.578672 | 8_1:-69602073 | Msa1210580:intron |
| TGTTACTTCCATAAAATCAC+AGG | 0.578722 | 8_1:+69599900 | None:intergenic |
| ACTCCTATTGGCTTGCACAA+AGG | 0.579672 | 8_1:-69601492 | Msa1210580:CDS |
| ACACAGTCACAGAATACAGC+TGG | 0.584689 | 8_1:-69599955 | Msa1210580:CDS |
| AGAGGATGGTTCACTGAATG+TGG | 0.592726 | 8_1:-69602133 | Msa1210580:CDS |
| TGCAAAACGAAGTGATATGT+TGG | 0.598158 | 8_1:-69600079 | Msa1210580:CDS |
| GTGAGCTTTCACCAACGGAA+AGG | 0.604444 | 8_1:-69601765 | Msa1210580:CDS |
| CATTCAGTGAACCATCCTCT+AGG | 0.612434 | 8_1:+69602136 | None:intergenic |
| TGTAAAGAGTCATTATCTCG+TGG | 0.620843 | 8_1:+69600007 | None:intergenic |
| TCTACCATTGAGAACTCCAA+GGG | 0.627379 | 8_1:-69601902 | Msa1210580:CDS |
| CCCAACGAGAGATAAGCCAT+TGG | 0.632538 | 8_1:+69599979 | None:intergenic |
| ATCTACCATTGAGAACTCCA+AGG | 0.639168 | 8_1:-69601903 | Msa1210580:CDS |
| CGGTTCTGCGTCGGGCATGG+CGG | 0.640282 | 8_1:-69601716 | Msa1210580:CDS |
| TTCAGATGCAAATCCAGATG+AGG | 0.642126 | 8_1:-69601797 | Msa1210580:CDS |
| GATGTATCAGCGAACAGCAG+CGG | 0.654571 | 8_1:-69601694 | Msa1210580:CDS |
| TGTATCTTAACATGTCTGCA+AGG | 0.658706 | 8_1:+69601844 | None:intergenic |
| ATCTCGTGGACATAACCACC+AGG | 0.660799 | 8_1:+69600021 | None:intergenic |
| TCGACAGTATGGGCGCCTAG+AGG | 0.662608 | 8_1:-69602151 | Msa1210580:CDS |
| TCACTGAATGTGGTTACCCG+TGG | 0.666796 | 8_1:-69602123 | Msa1210580:CDS |
| GATATGTTGGTGTCAAATGA+GGG | 0.667471 | 8_1:-69600066 | Msa1210580:CDS |
| GTACATGCGATAAACCCAGT+GGG | 0.668415 | 8_1:+69601516 | None:intergenic |
| AAATGGACTAAAACTCACCC+AGG | 0.670197 | 8_1:+69599929 | None:intergenic |
| ATAACCACCAGGATTCACAT+AGG | 0.678095 | 8_1:+69600032 | None:intergenic |
| GGTGCCTATGTGAATCCTGG+TGG | 0.679597 | 8_1:-69600036 | Msa1210580:CDS |
| AATGGCTAACAGGAACAGCA+CGG | 0.692256 | 8_1:-69602240 | Msa1210580:intron |
| GGATTCACATAGGCACCAAG+AGG | 0.693126 | 8_1:+69600042 | None:intergenic |
| AACAACGATTTCATCTAAGG+CGG | 0.700763 | 8_1:-69602098 | Msa1210580:CDS |
| AGATAATGACTCTTTACACA+AGG | 0.713167 | 8_1:-69600002 | Msa1210580:CDS |
| TATGTGGAAGCAAATAATTG+GGG | 0.714216 | 8_1:-69600371 | Msa1210580:CDS |
| TATGTGGAAGCAAATAATTG+GGG | 0.714216 | 8_1:-69600616 | Msa1210580:CDS |
| TACATGCGATAAACCCAGTG+GGG | 0.730042 | 8_1:+69601517 | None:intergenic |
| CGTACATGCGATAAACCCAG+TGG | 0.742112 | 8_1:+69601515 | None:intergenic |
| CTACCATTGAGAACTCCAAG+GGG | 0.751682 | 8_1:-69601901 | Msa1210580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATTATTTATAAAAAA+CGG | + | chr8_1:69601405-69601424 | None:intergenic | 0.0% |
| !! | TTTAAATTATTTATAAAAAA+CGG | + | chr8_1:69601405-69601424 | None:intergenic | 0.0% |
| !!! | ATTATAAATTATTTCTCTTT+TGG | + | chr8_1:69601143-69601162 | None:intergenic | 10.0% |
| !! | AAATAATTTATAATAAGTGT+GGG | - | chr8_1:69601149-69601168 | Msa1210580:intron | 10.0% |
| !! | TTATATTTATCTCTAAATAT+AGG | - | chr8_1:69601427-69601446 | Msa1210580:intron | 10.0% |
| !!! | ATTATAAATTATTTCTCTTT+TGG | + | chr8_1:69601143-69601162 | None:intergenic | 10.0% |
| !! | AAATAATTTATAATAAGTGT+GGG | - | chr8_1:69601149-69601168 | Msa1210580:intron | 10.0% |
| !! | TTATATTTATCTCTAAATAT+AGG | - | chr8_1:69601427-69601446 | Msa1210580:intron | 10.0% |
| !! | AATTCAAACAAAAATCTAAA+TGG | - | chr8_1:69600809-69600828 | Msa1210580:intron | 15.0% |
| !!! | ATGCTACAATTTTTTTTATA+TGG | + | chr8_1:69600917-69600936 | None:intergenic | 15.0% |
| !! | CATAATATGAAAAATTATAG+AGG | + | chr8_1:69600950-69600969 | None:intergenic | 15.0% |
| !!! | CTCTATAATTTTTCATATTA+TGG | - | chr8_1:69600948-69600967 | Msa1210580:intron | 15.0% |
| !! | GAAATAATTTATAATAAGTG+TGG | - | chr8_1:69601148-69601167 | Msa1210580:intron | 15.0% |
| !! | AAATTATTTATAAAAAACGG+AGG | + | chr8_1:69601402-69601421 | None:intergenic | 15.0% |
| !! | TTACTATTATCTCTAAATAT+AGG | - | chr8_1:69601672-69601691 | Msa1210580:CDS | 15.0% |
| !! | AATTCAAACAAAAATCTAAA+TGG | - | chr8_1:69600809-69600828 | Msa1210580:intron | 15.0% |
| !!! | ATGCTACAATTTTTTTTATA+TGG | + | chr8_1:69600917-69600936 | None:intergenic | 15.0% |
| !! | CATAATATGAAAAATTATAG+AGG | + | chr8_1:69600950-69600969 | None:intergenic | 15.0% |
| !!! | CTCTATAATTTTTCATATTA+TGG | - | chr8_1:69600948-69600967 | Msa1210580:intron | 15.0% |
| !! | GAAATAATTTATAATAAGTG+TGG | - | chr8_1:69601148-69601167 | Msa1210580:intron | 15.0% |
| !! | AAATTATTTATAAAAAACGG+AGG | + | chr8_1:69601402-69601421 | None:intergenic | 15.0% |
| !! | TTACTATTATCTCTAAATAT+AGG | - | chr8_1:69601672-69601691 | Msa1210580:CDS | 15.0% |
| !! | CAAGTGGATAATAATAAAAA+GGG | + | chr8_1:69600110-69600129 | None:intergenic | 20.0% |
| !! | ACAAGTGGATAATAATAAAA+AGG | + | chr8_1:69600111-69600130 | None:intergenic | 20.0% |
| !! | TATTACTTGTATTTCAGAAA+TGG | - | chr8_1:69600848-69600867 | Msa1210580:intron | 20.0% |
| !! | ATGAATATTATATCAAGAAG+CGG | + | chr8_1:69601078-69601097 | None:intergenic | 20.0% |
| !!! | ATTTGAGATATATGATGATA+TGG | - | chr8_1:69601112-69601131 | Msa1210580:intron | 20.0% |
| !!! | TTTGAGATATATGATGATAT+GGG | - | chr8_1:69601113-69601132 | Msa1210580:intron | 20.0% |
| !!! | AGTTTCTAAAAATTTAGTGT+AGG | - | chr8_1:69601222-69601241 | Msa1210580:intron | 20.0% |
| !! | CAAGTGGATAATAATAAAAA+GGG | + | chr8_1:69600110-69600129 | None:intergenic | 20.0% |
| !! | ACAAGTGGATAATAATAAAA+AGG | + | chr8_1:69600111-69600130 | None:intergenic | 20.0% |
| !! | TATTACTTGTATTTCAGAAA+TGG | - | chr8_1:69600848-69600867 | Msa1210580:intron | 20.0% |
| !! | ATGAATATTATATCAAGAAG+CGG | + | chr8_1:69601078-69601097 | None:intergenic | 20.0% |
| !!! | ATTTGAGATATATGATGATA+TGG | - | chr8_1:69601112-69601131 | Msa1210580:intron | 20.0% |
| !!! | TTTGAGATATATGATGATAT+GGG | - | chr8_1:69601113-69601132 | Msa1210580:intron | 20.0% |
| !!! | AGTTTCTAAAAATTTAGTGT+AGG | - | chr8_1:69601222-69601241 | Msa1210580:intron | 20.0% |
| ! | AAGATACATGGCTTAAAAAA+TGG | - | chr8_1:69600303-69600322 | Msa1210580:CDS | 25.0% |
| !!! | ATAAGATTTCAAAAGCATTC+TGG | - | chr8_1:69600592-69600611 | Msa1210580:CDS | 25.0% |
| ! | CATATTATGGAAACTTTGAA+TGG | - | chr8_1:69600961-69600980 | Msa1210580:intron | 25.0% |
| ! | ATATGTGGAAGCAAATAATT+GGG | - | chr8_1:69601515-69601534 | Msa1210580:CDS | 25.0% |
| ! | ATGTGAAATGATAAAACATC+AGG | + | chr8_1:69601571-69601590 | None:intergenic | 25.0% |
| ! | ATATGTGGAAGCAAATAATT+GGG | - | chr8_1:69601515-69601534 | Msa1210580:CDS | 25.0% |
| ! | ATGTGAAATGATAAAACATC+AGG | + | chr8_1:69601571-69601590 | None:intergenic | 25.0% |
| ! | AATATGATGTGCAAAATTGT+GGG | + | chr8_1:69601985-69602004 | None:intergenic | 25.0% |
| ! | TAATATGATGTGCAAAATTG+TGG | + | chr8_1:69601986-69602005 | None:intergenic | 25.0% |
| ! | AAAATCACAGGACATAAAAA+TGG | + | chr8_1:69602223-69602242 | None:intergenic | 25.0% |
| !! | TTTTATGTCCTGTGATTTTA+TGG | - | chr8_1:69602224-69602243 | Msa1210580:intron | 25.0% |
| ! | AAGATACATGGCTTAAAAAA+TGG | - | chr8_1:69600303-69600322 | Msa1210580:CDS | 25.0% |
| !!! | ATAAGATTTCAAAAGCATTC+TGG | - | chr8_1:69600592-69600611 | Msa1210580:CDS | 25.0% |
| ! | CATATTATGGAAACTTTGAA+TGG | - | chr8_1:69600961-69600980 | Msa1210580:intron | 25.0% |
| ! | ATATGTGGAAGCAAATAATT+GGG | - | chr8_1:69601515-69601534 | Msa1210580:CDS | 25.0% |
| ! | ATGTGAAATGATAAAACATC+AGG | + | chr8_1:69601571-69601590 | None:intergenic | 25.0% |
| ! | ATATGTGGAAGCAAATAATT+GGG | - | chr8_1:69601515-69601534 | Msa1210580:CDS | 25.0% |
| ! | ATGTGAAATGATAAAACATC+AGG | + | chr8_1:69601571-69601590 | None:intergenic | 25.0% |
| ! | AATATGATGTGCAAAATTGT+GGG | + | chr8_1:69601985-69602004 | None:intergenic | 25.0% |
| ! | TAATATGATGTGCAAAATTG+TGG | + | chr8_1:69601986-69602005 | None:intergenic | 25.0% |
| ! | AAAATCACAGGACATAAAAA+TGG | + | chr8_1:69602223-69602242 | None:intergenic | 25.0% |
| !! | TTTTATGTCCTGTGATTTTA+TGG | - | chr8_1:69602224-69602243 | Msa1210580:intron | 25.0% |
| ! | TTGACTTCCTTTTCTTTGTT+TGG | - | chr8_1:69600156-69600175 | Msa1210580:intron | 30.0% |
| ATAATTTGGATCTCTCCATA+AGG | + | chr8_1:69600201-69600220 | None:intergenic | 30.0% | |
| GTAGATCTTCCTCAATAATT+TGG | + | chr8_1:69600215-69600234 | None:intergenic | 30.0% | |
| TCAGGAAATAAGATCCAATT+TGG | - | chr8_1:69600485-69600504 | Msa1210580:intron | 30.0% | |
| TTCAATGCTCAAATCCAAAT+TGG | + | chr8_1:69600502-69600521 | None:intergenic | 30.0% | |
| ATTGAAAAATGTTCCACTTC+TGG | - | chr8_1:69600516-69600535 | Msa1210580:CDS | 30.0% | |
| AGTGATGTCATAACAAAGAA+GGG | + | chr8_1:69600728-69600747 | None:intergenic | 30.0% | |
| TTGTTATGACATCACTGTTA+TGG | - | chr8_1:69600732-69600751 | Msa1210580:intron | 30.0% | |
| TGTTATGACATCACTGTTAT+GGG | - | chr8_1:69600733-69600752 | Msa1210580:intron | 30.0% | |
| ! | ATGATGTTGTGCTTTTCTTT+TGG | - | chr8_1:69600759-69600778 | Msa1210580:intron | 30.0% |
| ! | TGATGTTGTGCTTTTCTTTT+GGG | - | chr8_1:69600760-69600779 | Msa1210580:intron | 30.0% |
| AGATATATGATGATATGGGT+GGG | - | chr8_1:69601117-69601136 | Msa1210580:intron | 30.0% | |
| TTATATAGTATACTCCACCA+GGG | + | chr8_1:69601281-69601300 | None:intergenic | 30.0% | |
| ATTATATAGTATACTCCACC+AGG | + | chr8_1:69601282-69601301 | None:intergenic | 30.0% | |
| !! | GTTGATAATCTGTAGATATG+TGG | - | chr8_1:69601500-69601519 | Msa1210580:CDS | 30.0% |
| GATATGTGGAAGCAAATAAT+TGG | - | chr8_1:69601514-69601533 | Msa1210580:CDS | 30.0% | |
| TATGTGGAAGCAAATAATTG+GGG | - | chr8_1:69601516-69601535 | Msa1210580:CDS | 30.0% | |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr8_1:69601596-69601615 | None:intergenic | 30.0% |
| ! | TTTCTGAATCTACAAGCTTT+TGG | - | chr8_1:69601608-69601627 | Msa1210580:CDS | 30.0% |
| !! | GTTGATAATCTGTAGATATG+TGG | - | chr8_1:69601500-69601519 | Msa1210580:CDS | 30.0% |
| GATATGTGGAAGCAAATAAT+TGG | - | chr8_1:69601514-69601533 | Msa1210580:CDS | 30.0% | |
| TATGTGGAAGCAAATAATTG+GGG | - | chr8_1:69601516-69601535 | Msa1210580:CDS | 30.0% | |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr8_1:69601596-69601615 | None:intergenic | 30.0% |
| ! | TTTCTGAATCTACAAGCTTT+TGG | - | chr8_1:69601608-69601627 | Msa1210580:CDS | 30.0% |
| ATATGATGTGCAAAATTGTG+GGG | + | chr8_1:69601984-69602003 | None:intergenic | 30.0% | |
| AGATAATGACTCTTTACACA+AGG | - | chr8_1:69602130-69602149 | Msa1210580:CDS | 30.0% | |
| ! | TGTTACTTCCATAAAATCAC+AGG | + | chr8_1:69602235-69602254 | None:intergenic | 30.0% |
| ! | TTGACTTCCTTTTCTTTGTT+TGG | - | chr8_1:69600156-69600175 | Msa1210580:intron | 30.0% |
| ATAATTTGGATCTCTCCATA+AGG | + | chr8_1:69600201-69600220 | None:intergenic | 30.0% | |
| GTAGATCTTCCTCAATAATT+TGG | + | chr8_1:69600215-69600234 | None:intergenic | 30.0% | |
| TCAGGAAATAAGATCCAATT+TGG | - | chr8_1:69600485-69600504 | Msa1210580:intron | 30.0% | |
| TTCAATGCTCAAATCCAAAT+TGG | + | chr8_1:69600502-69600521 | None:intergenic | 30.0% | |
| ATTGAAAAATGTTCCACTTC+TGG | - | chr8_1:69600516-69600535 | Msa1210580:CDS | 30.0% | |
| AGTGATGTCATAACAAAGAA+GGG | + | chr8_1:69600728-69600747 | None:intergenic | 30.0% | |
| TTGTTATGACATCACTGTTA+TGG | - | chr8_1:69600732-69600751 | Msa1210580:intron | 30.0% | |
| TGTTATGACATCACTGTTAT+GGG | - | chr8_1:69600733-69600752 | Msa1210580:intron | 30.0% | |
| ! | ATGATGTTGTGCTTTTCTTT+TGG | - | chr8_1:69600759-69600778 | Msa1210580:intron | 30.0% |
| ! | TGATGTTGTGCTTTTCTTTT+GGG | - | chr8_1:69600760-69600779 | Msa1210580:intron | 30.0% |
| AGATATATGATGATATGGGT+GGG | - | chr8_1:69601117-69601136 | Msa1210580:intron | 30.0% | |
| TTATATAGTATACTCCACCA+GGG | + | chr8_1:69601281-69601300 | None:intergenic | 30.0% | |
| ATTATATAGTATACTCCACC+AGG | + | chr8_1:69601282-69601301 | None:intergenic | 30.0% | |
| !! | GTTGATAATCTGTAGATATG+TGG | - | chr8_1:69601500-69601519 | Msa1210580:CDS | 30.0% |
| GATATGTGGAAGCAAATAAT+TGG | - | chr8_1:69601514-69601533 | Msa1210580:CDS | 30.0% | |
| TATGTGGAAGCAAATAATTG+GGG | - | chr8_1:69601516-69601535 | Msa1210580:CDS | 30.0% | |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr8_1:69601596-69601615 | None:intergenic | 30.0% |
| ! | TTTCTGAATCTACAAGCTTT+TGG | - | chr8_1:69601608-69601627 | Msa1210580:CDS | 30.0% |
| !! | GTTGATAATCTGTAGATATG+TGG | - | chr8_1:69601500-69601519 | Msa1210580:CDS | 30.0% |
| GATATGTGGAAGCAAATAAT+TGG | - | chr8_1:69601514-69601533 | Msa1210580:CDS | 30.0% | |
| TATGTGGAAGCAAATAATTG+GGG | - | chr8_1:69601516-69601535 | Msa1210580:CDS | 30.0% | |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr8_1:69601596-69601615 | None:intergenic | 30.0% |
| ! | TTTCTGAATCTACAAGCTTT+TGG | - | chr8_1:69601608-69601627 | Msa1210580:CDS | 30.0% |
| ATATGATGTGCAAAATTGTG+GGG | + | chr8_1:69601984-69602003 | None:intergenic | 30.0% | |
| AGATAATGACTCTTTACACA+AGG | - | chr8_1:69602130-69602149 | Msa1210580:CDS | 30.0% | |
| ! | TGTTACTTCCATAAAATCAC+AGG | + | chr8_1:69602235-69602254 | None:intergenic | 30.0% |
| TATCTACAGATTCGACAGTA+TGG | - | chr8_1:69599970-69599989 | Msa1210580:CDS | 35.0% | |
| ATCTACAGATTCGACAGTAT+GGG | - | chr8_1:69599971-69599990 | Msa1210580:CDS | 35.0% | |
| GACAACAACGATTTCATCTA+AGG | - | chr8_1:69600031-69600050 | Msa1210580:CDS | 35.0% | |
| AACAACGATTTCATCTAAGG+CGG | - | chr8_1:69600034-69600053 | Msa1210580:CDS | 35.0% | |
| GTCAATAATCTTTAGCTGCA+CGG | + | chr8_1:69600141-69600160 | None:intergenic | 35.0% | |
| !! | TCCTTTTCTTTGTTTGGTTG+TGG | - | chr8_1:69600162-69600181 | Msa1210580:intron | 35.0% |
| TGGAGAGATCCAAATTATTG+AGG | - | chr8_1:69600203-69600222 | Msa1210580:intron | 35.0% | |
| TGTATCTTAACATGTCTGCA+AGG | + | chr8_1:69600291-69600310 | None:intergenic | 35.0% | |
| TGCAGACATGTTAAGATACA+TGG | - | chr8_1:69600291-69600310 | Msa1210580:intron | 35.0% | |
| AAAACCTATCTATCAGCCAT+TGG | - | chr8_1:69600390-69600409 | Msa1210580:intron | 35.0% | |
| GCATCTATTAAGCTCTTCTT+TGG | + | chr8_1:69600553-69600572 | None:intergenic | 35.0% | |
| TGATGTCATAACAAAGAAGG+GGG | + | chr8_1:69600726-69600745 | None:intergenic | 35.0% | |
| GTGATGTCATAACAAAGAAG+GGG | + | chr8_1:69600727-69600746 | None:intergenic | 35.0% | |
| CAGTGATGTCATAACAAAGA+AGG | + | chr8_1:69600729-69600748 | None:intergenic | 35.0% | |
| ! | TCCAGGATTTTTGAATAGTG+AGG | - | chr8_1:69600888-69600907 | Msa1210580:intron | 35.0% |
| ! | CCAGGATTTTTGAATAGTGA+GGG | - | chr8_1:69600889-69600908 | Msa1210580:intron | 35.0% |
| GAGATATATGATGATATGGG+TGG | - | chr8_1:69601116-69601135 | Msa1210580:intron | 35.0% | |
| !! | TAGTTGACATTTTGACCACA+TGG | + | chr8_1:69601175-69601194 | None:intergenic | 35.0% |
| ATCTATGTTGATCCATGTGT+GGG | + | chr8_1:69601254-69601273 | None:intergenic | 35.0% | |
| ! | AATAATTGGGGTACCTAGTA+TGG | - | chr8_1:69601528-69601547 | Msa1210580:CDS | 35.0% |
| AAGCTTGTAGATTCAGAAAC+AGG | + | chr8_1:69601607-69601626 | None:intergenic | 35.0% | |
| ! | TACAAGCTTTTGGATATCGA+TGG | - | chr8_1:69601618-69601637 | Msa1210580:CDS | 35.0% |
| ATATCGATGGCATCACATAT+AGG | - | chr8_1:69601631-69601650 | Msa1210580:CDS | 35.0% | |
| ! | AATAATTGGGGTACCTAGTA+TGG | - | chr8_1:69601528-69601547 | Msa1210580:CDS | 35.0% |
| AAGCTTGTAGATTCAGAAAC+AGG | + | chr8_1:69601607-69601626 | None:intergenic | 35.0% | |
| ! | TACAAGCTTTTGGATATCGA+TGG | - | chr8_1:69601618-69601637 | Msa1210580:CDS | 35.0% |
| ATATCGATGGCATCACATAT+AGG | - | chr8_1:69601631-69601650 | Msa1210580:CDS | 35.0% | |
| TTACCTGGCATATTCTACAT+CGG | + | chr8_1:69601943-69601962 | None:intergenic | 35.0% | |
| TTGGTGAGAAAATGATTACC+TGG | + | chr8_1:69601958-69601977 | None:intergenic | 35.0% | |
| TATGATGTGCAAAATTGTGG+GGG | + | chr8_1:69601983-69602002 | None:intergenic | 35.0% | |
| TGCAAAACGAAGTGATATGT+TGG | - | chr8_1:69602053-69602072 | Msa1210580:intron | 35.0% | |
| !! | TGATATGTTGGTGTCAAATG+AGG | - | chr8_1:69602065-69602084 | Msa1210580:intron | 35.0% |
| !! | GATATGTTGGTGTCAAATGA+GGG | - | chr8_1:69602066-69602085 | Msa1210580:intron | 35.0% |
| TGTAAAGAGTCATTATCTCG+TGG | + | chr8_1:69602128-69602147 | None:intergenic | 35.0% | |
| TATCTACAGATTCGACAGTA+TGG | - | chr8_1:69599970-69599989 | Msa1210580:CDS | 35.0% | |
| ATCTACAGATTCGACAGTAT+GGG | - | chr8_1:69599971-69599990 | Msa1210580:CDS | 35.0% | |
| GACAACAACGATTTCATCTA+AGG | - | chr8_1:69600031-69600050 | Msa1210580:CDS | 35.0% | |
| AACAACGATTTCATCTAAGG+CGG | - | chr8_1:69600034-69600053 | Msa1210580:CDS | 35.0% | |
| GTCAATAATCTTTAGCTGCA+CGG | + | chr8_1:69600141-69600160 | None:intergenic | 35.0% | |
| !! | TCCTTTTCTTTGTTTGGTTG+TGG | - | chr8_1:69600162-69600181 | Msa1210580:intron | 35.0% |
| TGGAGAGATCCAAATTATTG+AGG | - | chr8_1:69600203-69600222 | Msa1210580:intron | 35.0% | |
| TGTATCTTAACATGTCTGCA+AGG | + | chr8_1:69600291-69600310 | None:intergenic | 35.0% | |
| TGCAGACATGTTAAGATACA+TGG | - | chr8_1:69600291-69600310 | Msa1210580:intron | 35.0% | |
| AAAACCTATCTATCAGCCAT+TGG | - | chr8_1:69600390-69600409 | Msa1210580:intron | 35.0% | |
| GCATCTATTAAGCTCTTCTT+TGG | + | chr8_1:69600553-69600572 | None:intergenic | 35.0% | |
| TGATGTCATAACAAAGAAGG+GGG | + | chr8_1:69600726-69600745 | None:intergenic | 35.0% | |
| GTGATGTCATAACAAAGAAG+GGG | + | chr8_1:69600727-69600746 | None:intergenic | 35.0% | |
| CAGTGATGTCATAACAAAGA+AGG | + | chr8_1:69600729-69600748 | None:intergenic | 35.0% | |
| ! | TCCAGGATTTTTGAATAGTG+AGG | - | chr8_1:69600888-69600907 | Msa1210580:intron | 35.0% |
| ! | CCAGGATTTTTGAATAGTGA+GGG | - | chr8_1:69600889-69600908 | Msa1210580:intron | 35.0% |
| GAGATATATGATGATATGGG+TGG | - | chr8_1:69601116-69601135 | Msa1210580:intron | 35.0% | |
| !! | TAGTTGACATTTTGACCACA+TGG | + | chr8_1:69601175-69601194 | None:intergenic | 35.0% |
| ATCTATGTTGATCCATGTGT+GGG | + | chr8_1:69601254-69601273 | None:intergenic | 35.0% | |
| ! | AATAATTGGGGTACCTAGTA+TGG | - | chr8_1:69601528-69601547 | Msa1210580:CDS | 35.0% |
| AAGCTTGTAGATTCAGAAAC+AGG | + | chr8_1:69601607-69601626 | None:intergenic | 35.0% | |
| ! | TACAAGCTTTTGGATATCGA+TGG | - | chr8_1:69601618-69601637 | Msa1210580:CDS | 35.0% |
| ATATCGATGGCATCACATAT+AGG | - | chr8_1:69601631-69601650 | Msa1210580:CDS | 35.0% | |
| ! | AATAATTGGGGTACCTAGTA+TGG | - | chr8_1:69601528-69601547 | Msa1210580:CDS | 35.0% |
| AAGCTTGTAGATTCAGAAAC+AGG | + | chr8_1:69601607-69601626 | None:intergenic | 35.0% | |
| ! | TACAAGCTTTTGGATATCGA+TGG | - | chr8_1:69601618-69601637 | Msa1210580:CDS | 35.0% |
| ATATCGATGGCATCACATAT+AGG | - | chr8_1:69601631-69601650 | Msa1210580:CDS | 35.0% | |
| TTACCTGGCATATTCTACAT+CGG | + | chr8_1:69601943-69601962 | None:intergenic | 35.0% | |
| TTGGTGAGAAAATGATTACC+TGG | + | chr8_1:69601958-69601977 | None:intergenic | 35.0% | |
| TATGATGTGCAAAATTGTGG+GGG | + | chr8_1:69601983-69602002 | None:intergenic | 35.0% | |
| TGCAAAACGAAGTGATATGT+TGG | - | chr8_1:69602053-69602072 | Msa1210580:intron | 35.0% | |
| !! | TGATATGTTGGTGTCAAATG+AGG | - | chr8_1:69602065-69602084 | Msa1210580:intron | 35.0% |
| !! | GATATGTTGGTGTCAAATGA+GGG | - | chr8_1:69602066-69602085 | Msa1210580:intron | 35.0% |
| TGTAAAGAGTCATTATCTCG+TGG | + | chr8_1:69602128-69602147 | None:intergenic | 35.0% | |
| ATGAAATCGTTGTTGTCCAC+GGG | + | chr8_1:69600028-69600047 | None:intergenic | 40.0% | |
| GATGAAATCGTTGTTGTCCA+CGG | + | chr8_1:69600029-69600048 | None:intergenic | 40.0% | |
| GCCACAACCAAACAAAGAAA+AGG | + | chr8_1:69600166-69600185 | None:intergenic | 40.0% | |
| CTCCATAAGGCTAAGAAGAA+CGG | + | chr8_1:69600188-69600207 | None:intergenic | 40.0% | |
| ATCTACCATTGAGAACTCCA+AGG | - | chr8_1:69600229-69600248 | Msa1210580:intron | 40.0% | |
| TCTACCATTGAGAACTCCAA+GGG | - | chr8_1:69600230-69600249 | Msa1210580:intron | 40.0% | |
| TTCAGATGCAAATCCAGATG+AGG | - | chr8_1:69600335-69600354 | Msa1210580:CDS | 40.0% | |
| TCACTCTCAAAATCCTCATC+TGG | + | chr8_1:69600351-69600370 | None:intergenic | 40.0% | |
| ! | AGATAGGTTTTCCTTTCCGT+TGG | + | chr8_1:69600381-69600400 | None:intergenic | 40.0% |
| !! | TATCTATCAGCCATTGGTTC+CGG | - | chr8_1:69600396-69600415 | Msa1210580:intron | 40.0% |
| CTTCATGCATAAGTCAGATC+AGG | - | chr8_1:69600467-69600486 | Msa1210580:intron | 40.0% | |
| GATGTCATAACAAAGAAGGG+GGG | + | chr8_1:69600725-69600744 | None:intergenic | 40.0% | |
| GAAATGGTTATGTGCACTGA+CGG | - | chr8_1:69600864-69600883 | Msa1210580:intron | 40.0% | |
| CCCTCACTATTCAAAAATCC+TGG | + | chr8_1:69600892-69600911 | None:intergenic | 40.0% | |
| TATAATAAGTGTGGGCCATG+TGG | - | chr8_1:69601157-69601176 | Msa1210580:intron | 40.0% | |
| GATCTATGTTGATCCATGTG+TGG | + | chr8_1:69601255-69601274 | None:intergenic | 40.0% | |
| CACATGGATCAACATAGATC+CGG | - | chr8_1:69601255-69601274 | Msa1210580:intron | 40.0% | |
| TTGACGAGACTATCCATACT+AGG | + | chr8_1:69601544-69601563 | None:intergenic | 40.0% | |
| TTGACGAGACTATCCATACT+AGG | + | chr8_1:69601544-69601563 | None:intergenic | 40.0% | |
| ATAACCACCAGGATTCACAT+AGG | + | chr8_1:69602103-69602122 | None:intergenic | 40.0% | |
| !! | AAATGGACTAAAACTCACCC+AGG | + | chr8_1:69602206-69602225 | None:intergenic | 40.0% |
| ATGAAATCGTTGTTGTCCAC+GGG | + | chr8_1:69600028-69600047 | None:intergenic | 40.0% | |
| GATGAAATCGTTGTTGTCCA+CGG | + | chr8_1:69600029-69600048 | None:intergenic | 40.0% | |
| GCCACAACCAAACAAAGAAA+AGG | + | chr8_1:69600166-69600185 | None:intergenic | 40.0% | |
| CTCCATAAGGCTAAGAAGAA+CGG | + | chr8_1:69600188-69600207 | None:intergenic | 40.0% | |
| ATCTACCATTGAGAACTCCA+AGG | - | chr8_1:69600229-69600248 | Msa1210580:intron | 40.0% | |
| TCTACCATTGAGAACTCCAA+GGG | - | chr8_1:69600230-69600249 | Msa1210580:intron | 40.0% | |
| TTCAGATGCAAATCCAGATG+AGG | - | chr8_1:69600335-69600354 | Msa1210580:CDS | 40.0% | |
| TCACTCTCAAAATCCTCATC+TGG | + | chr8_1:69600351-69600370 | None:intergenic | 40.0% | |
| ! | AGATAGGTTTTCCTTTCCGT+TGG | + | chr8_1:69600381-69600400 | None:intergenic | 40.0% |
| !! | TATCTATCAGCCATTGGTTC+CGG | - | chr8_1:69600396-69600415 | Msa1210580:intron | 40.0% |
| CTTCATGCATAAGTCAGATC+AGG | - | chr8_1:69600467-69600486 | Msa1210580:intron | 40.0% | |
| GATGTCATAACAAAGAAGGG+GGG | + | chr8_1:69600725-69600744 | None:intergenic | 40.0% | |
| GAAATGGTTATGTGCACTGA+CGG | - | chr8_1:69600864-69600883 | Msa1210580:intron | 40.0% | |
| CCCTCACTATTCAAAAATCC+TGG | + | chr8_1:69600892-69600911 | None:intergenic | 40.0% | |
| TATAATAAGTGTGGGCCATG+TGG | - | chr8_1:69601157-69601176 | Msa1210580:intron | 40.0% | |
| GATCTATGTTGATCCATGTG+TGG | + | chr8_1:69601255-69601274 | None:intergenic | 40.0% | |
| CACATGGATCAACATAGATC+CGG | - | chr8_1:69601255-69601274 | Msa1210580:intron | 40.0% | |
| TTGACGAGACTATCCATACT+AGG | + | chr8_1:69601544-69601563 | None:intergenic | 40.0% | |
| TTGACGAGACTATCCATACT+AGG | + | chr8_1:69601544-69601563 | None:intergenic | 40.0% | |
| ATAACCACCAGGATTCACAT+AGG | + | chr8_1:69602103-69602122 | None:intergenic | 40.0% | |
| !! | AAATGGACTAAAACTCACCC+AGG | + | chr8_1:69602206-69602225 | None:intergenic | 40.0% |
| CATTCAGTGAACCATCCTCT+AGG | + | chr8_1:69599999-69600018 | None:intergenic | 45.0% | |
| AGAGGATGGTTCACTGAATG+TGG | - | chr8_1:69599999-69600018 | Msa1210580:CDS | 45.0% | |
| ! | GATTTCATCTAAGGCGGTCT+TGG | - | chr8_1:69600040-69600059 | Msa1210580:CDS | 45.0% |
| CTACCATTGAGAACTCCAAG+GGG | - | chr8_1:69600231-69600250 | Msa1210580:intron | 45.0% | |
| TGAGAGTGAGCTTTCACCAA+CGG | - | chr8_1:69600362-69600381 | Msa1210580:CDS | 45.0% | |
| GGAACCAATGGCTGATAGAT+AGG | + | chr8_1:69600397-69600416 | None:intergenic | 45.0% | |
| TACATGCGATAAACCCAGTG+GGG | + | chr8_1:69600618-69600637 | None:intergenic | 45.0% | |
| GTACATGCGATAAACCCAGT+GGG | + | chr8_1:69600619-69600638 | None:intergenic | 45.0% | |
| ATCGCATGTACGACTCCTAT+TGG | - | chr8_1:69600628-69600647 | Msa1210580:intron | 45.0% | |
| !! | ACTCCTATTGGCTTGCACAA+AGG | - | chr8_1:69600640-69600659 | Msa1210580:intron | 45.0% |
| !! | CTCCTATTGGCTTGCACAAA+GGG | - | chr8_1:69600641-69600660 | Msa1210580:intron | 45.0% |
| CATAACAAAGAAGGGGGGAA+AGG | + | chr8_1:69600720-69600739 | None:intergenic | 45.0% | |
| ! | CCAGAAAACAAGAGCGTATG+AGG | + | chr8_1:69601373-69601392 | None:intergenic | 45.0% |
| !!! | CCTCATACGCTCTTGTTTTC+TGG | - | chr8_1:69601370-69601389 | Msa1210580:intron | 45.0% |
| CATCACATATAGGTTGCGCA+GGG | - | chr8_1:69601641-69601660 | Msa1210580:CDS | 45.0% | |
| CATCACATATAGGTTGCGCA+GGG | - | chr8_1:69601641-69601660 | Msa1210580:CDS | 45.0% | |
| TGTCCGATGTAGAATATGCC+AGG | - | chr8_1:69601937-69601956 | Msa1210580:CDS | 45.0% | |
| GACTCTTTACACAAGGCCAA+TGG | - | chr8_1:69602137-69602156 | Msa1210580:CDS | 45.0% | |
| CCAATGGCTTATCTCTCGTT+GGG | - | chr8_1:69602153-69602172 | Msa1210580:CDS | 45.0% | |
| ACACAGTCACAGAATACAGC+TGG | - | chr8_1:69602177-69602196 | Msa1210580:intron | 45.0% | |
| ! | ACAGAATACAGCTGGTTTCC+TGG | - | chr8_1:69602185-69602204 | Msa1210580:intron | 45.0% |
| ! | CAGAATACAGCTGGTTTCCT+GGG | - | chr8_1:69602186-69602205 | Msa1210580:intron | 45.0% |
| CATTCAGTGAACCATCCTCT+AGG | + | chr8_1:69599999-69600018 | None:intergenic | 45.0% | |
| AGAGGATGGTTCACTGAATG+TGG | - | chr8_1:69599999-69600018 | Msa1210580:CDS | 45.0% | |
| ! | GATTTCATCTAAGGCGGTCT+TGG | - | chr8_1:69600040-69600059 | Msa1210580:CDS | 45.0% |
| CTACCATTGAGAACTCCAAG+GGG | - | chr8_1:69600231-69600250 | Msa1210580:intron | 45.0% | |
| TGAGAGTGAGCTTTCACCAA+CGG | - | chr8_1:69600362-69600381 | Msa1210580:CDS | 45.0% | |
| GGAACCAATGGCTGATAGAT+AGG | + | chr8_1:69600397-69600416 | None:intergenic | 45.0% | |
| TACATGCGATAAACCCAGTG+GGG | + | chr8_1:69600618-69600637 | None:intergenic | 45.0% | |
| GTACATGCGATAAACCCAGT+GGG | + | chr8_1:69600619-69600638 | None:intergenic | 45.0% | |
| ATCGCATGTACGACTCCTAT+TGG | - | chr8_1:69600628-69600647 | Msa1210580:intron | 45.0% | |
| !! | ACTCCTATTGGCTTGCACAA+AGG | - | chr8_1:69600640-69600659 | Msa1210580:intron | 45.0% |
| !! | CTCCTATTGGCTTGCACAAA+GGG | - | chr8_1:69600641-69600660 | Msa1210580:intron | 45.0% |
| CATAACAAAGAAGGGGGGAA+AGG | + | chr8_1:69600720-69600739 | None:intergenic | 45.0% | |
| ! | CCAGAAAACAAGAGCGTATG+AGG | + | chr8_1:69601373-69601392 | None:intergenic | 45.0% |
| !!! | CCTCATACGCTCTTGTTTTC+TGG | - | chr8_1:69601370-69601389 | Msa1210580:intron | 45.0% |
| CATCACATATAGGTTGCGCA+GGG | - | chr8_1:69601641-69601660 | Msa1210580:CDS | 45.0% | |
| CATCACATATAGGTTGCGCA+GGG | - | chr8_1:69601641-69601660 | Msa1210580:CDS | 45.0% | |
| TGTCCGATGTAGAATATGCC+AGG | - | chr8_1:69601937-69601956 | Msa1210580:CDS | 45.0% | |
| GACTCTTTACACAAGGCCAA+TGG | - | chr8_1:69602137-69602156 | Msa1210580:CDS | 45.0% | |
| CCAATGGCTTATCTCTCGTT+GGG | - | chr8_1:69602153-69602172 | Msa1210580:CDS | 45.0% | |
| ACACAGTCACAGAATACAGC+TGG | - | chr8_1:69602177-69602196 | Msa1210580:intron | 45.0% | |
| ! | ACAGAATACAGCTGGTTTCC+TGG | - | chr8_1:69602185-69602204 | Msa1210580:intron | 45.0% |
| ! | CAGAATACAGCTGGTTTCCT+GGG | - | chr8_1:69602186-69602205 | Msa1210580:intron | 45.0% |
| TCACTGAATGTGGTTACCCG+TGG | - | chr8_1:69600009-69600028 | Msa1210580:CDS | 50.0% | |
| !! | GGCCGTTCTTCTTAGCCTTA+TGG | - | chr8_1:69600183-69600202 | Msa1210580:intron | 50.0% |
| !!! | AGAACTCCAAGGGGCGTTTT+TGG | - | chr8_1:69600240-69600259 | Msa1210580:intron | 50.0% |
| GATTTGCCAAAAACGCCCCT+TGG | + | chr8_1:69600249-69600268 | None:intergenic | 50.0% | |
| GTGAGCTTTCACCAACGGAA+AGG | - | chr8_1:69600367-69600386 | Msa1210580:CDS | 50.0% | |
| GATGTATCAGCGAACAGCAG+CGG | - | chr8_1:69600438-69600457 | Msa1210580:intron | 50.0% | |
| GGATGACTGCTTTCCAGAAG+TGG | + | chr8_1:69600532-69600551 | None:intergenic | 50.0% | |
| !! | AAAAGCATTCTGGCCCCACT+GGG | - | chr8_1:69600602-69600621 | Msa1210580:CDS | 50.0% |
| CGTACATGCGATAAACCCAG+TGG | + | chr8_1:69600620-69600639 | None:intergenic | 50.0% | |
| TGCCCTTTGTGCAAGCCAAT+AGG | + | chr8_1:69600646-69600665 | None:intergenic | 50.0% | |
| ! | TTATGTGCACTGACGGATCC+AGG | - | chr8_1:69600871-69600890 | Msa1210580:intron | 50.0% |
| ATAGTATACTCCACCAGGGC+CGG | + | chr8_1:69601277-69601296 | None:intergenic | 50.0% | |
| GCATCACATATAGGTTGCGC+AGG | - | chr8_1:69601640-69601659 | Msa1210580:CDS | 50.0% | |
| GCATCACATATAGGTTGCGC+AGG | - | chr8_1:69601640-69601659 | Msa1210580:CDS | 50.0% | |
| GTGCAAAATTGTGGGGGCTT+TGG | + | chr8_1:69601977-69601996 | None:intergenic | 50.0% | |
| GTGTCAAATGAGGGTCCTCT+TGG | - | chr8_1:69602075-69602094 | Msa1210580:CDS | 50.0% | |
| GGATTCACATAGGCACCAAG+AGG | + | chr8_1:69602093-69602112 | None:intergenic | 50.0% | |
| !! | CTTGGTGCCTATGTGAATCC+TGG | - | chr8_1:69602093-69602112 | Msa1210580:CDS | 50.0% |
| ATCTCGTGGACATAACCACC+AGG | + | chr8_1:69602114-69602133 | None:intergenic | 50.0% | |
| GCCAATGGCTTATCTCTCGT+TGG | - | chr8_1:69602152-69602171 | Msa1210580:CDS | 50.0% | |
| CCCAACGAGAGATAAGCCAT+TGG | + | chr8_1:69602156-69602175 | None:intergenic | 50.0% | |
| TCACTGAATGTGGTTACCCG+TGG | - | chr8_1:69600009-69600028 | Msa1210580:CDS | 50.0% | |
| !! | GGCCGTTCTTCTTAGCCTTA+TGG | - | chr8_1:69600183-69600202 | Msa1210580:intron | 50.0% |
| !!! | AGAACTCCAAGGGGCGTTTT+TGG | - | chr8_1:69600240-69600259 | Msa1210580:intron | 50.0% |
| GATTTGCCAAAAACGCCCCT+TGG | + | chr8_1:69600249-69600268 | None:intergenic | 50.0% | |
| GTGAGCTTTCACCAACGGAA+AGG | - | chr8_1:69600367-69600386 | Msa1210580:CDS | 50.0% | |
| GATGTATCAGCGAACAGCAG+CGG | - | chr8_1:69600438-69600457 | Msa1210580:intron | 50.0% | |
| GGATGACTGCTTTCCAGAAG+TGG | + | chr8_1:69600532-69600551 | None:intergenic | 50.0% | |
| !! | AAAAGCATTCTGGCCCCACT+GGG | - | chr8_1:69600602-69600621 | Msa1210580:CDS | 50.0% |
| CGTACATGCGATAAACCCAG+TGG | + | chr8_1:69600620-69600639 | None:intergenic | 50.0% | |
| TGCCCTTTGTGCAAGCCAAT+AGG | + | chr8_1:69600646-69600665 | None:intergenic | 50.0% | |
| ! | TTATGTGCACTGACGGATCC+AGG | - | chr8_1:69600871-69600890 | Msa1210580:intron | 50.0% |
| ATAGTATACTCCACCAGGGC+CGG | + | chr8_1:69601277-69601296 | None:intergenic | 50.0% | |
| GCATCACATATAGGTTGCGC+AGG | - | chr8_1:69601640-69601659 | Msa1210580:CDS | 50.0% | |
| GCATCACATATAGGTTGCGC+AGG | - | chr8_1:69601640-69601659 | Msa1210580:CDS | 50.0% | |
| GTGCAAAATTGTGGGGGCTT+TGG | + | chr8_1:69601977-69601996 | None:intergenic | 50.0% | |
| GTGTCAAATGAGGGTCCTCT+TGG | - | chr8_1:69602075-69602094 | Msa1210580:CDS | 50.0% | |
| GGATTCACATAGGCACCAAG+AGG | + | chr8_1:69602093-69602112 | None:intergenic | 50.0% | |
| !! | CTTGGTGCCTATGTGAATCC+TGG | - | chr8_1:69602093-69602112 | Msa1210580:CDS | 50.0% |
| ATCTCGTGGACATAACCACC+AGG | + | chr8_1:69602114-69602133 | None:intergenic | 50.0% | |
| GCCAATGGCTTATCTCTCGT+TGG | - | chr8_1:69602152-69602171 | Msa1210580:CDS | 50.0% | |
| CCCAACGAGAGATAAGCCAT+TGG | + | chr8_1:69602156-69602175 | None:intergenic | 50.0% | |
| CGGTCTTGGAACGACGTTGA+CGG | - | chr8_1:69600054-69600073 | Msa1210580:CDS | 55.0% | |
| TTGGAACGACGTTGACGGAG+TGG | - | chr8_1:69600059-69600078 | Msa1210580:CDS | 55.0% | |
| CTGCACGGCTAAAGCACAAG+TGG | + | chr8_1:69600126-69600145 | None:intergenic | 55.0% | |
| ACGCCCCTTGGAGTTCTCAA+TGG | + | chr8_1:69600237-69600256 | None:intergenic | 55.0% | |
| !! | CATTGGTTCCGGTTCTGCGT+CGG | - | chr8_1:69600407-69600426 | Msa1210580:intron | 55.0% |
| ! | ATTGGTTCCGGTTCTGCGTC+GGG | - | chr8_1:69600408-69600427 | Msa1210580:intron | 55.0% |
| !! | CAAAAGCATTCTGGCCCCAC+TGG | - | chr8_1:69600601-69600620 | Msa1210580:CDS | 55.0% |
| TGTAGGCACAAGCCCACACA+TGG | - | chr8_1:69601239-69601258 | Msa1210580:intron | 55.0% | |
| GATCAACATAGATCCGGCCC+TGG | - | chr8_1:69601261-69601280 | Msa1210580:intron | 55.0% | |
| GGTGCCTATGTGAATCCTGG+TGG | - | chr8_1:69602096-69602115 | Msa1210580:CDS | 55.0% | |
| CGGTCTTGGAACGACGTTGA+CGG | - | chr8_1:69600054-69600073 | Msa1210580:CDS | 55.0% | |
| TTGGAACGACGTTGACGGAG+TGG | - | chr8_1:69600059-69600078 | Msa1210580:CDS | 55.0% | |
| CTGCACGGCTAAAGCACAAG+TGG | + | chr8_1:69600126-69600145 | None:intergenic | 55.0% | |
| ACGCCCCTTGGAGTTCTCAA+TGG | + | chr8_1:69600237-69600256 | None:intergenic | 55.0% | |
| !! | CATTGGTTCCGGTTCTGCGT+CGG | - | chr8_1:69600407-69600426 | Msa1210580:intron | 55.0% |
| ! | ATTGGTTCCGGTTCTGCGTC+GGG | - | chr8_1:69600408-69600427 | Msa1210580:intron | 55.0% |
| !! | CAAAAGCATTCTGGCCCCAC+TGG | - | chr8_1:69600601-69600620 | Msa1210580:CDS | 55.0% |
| TGTAGGCACAAGCCCACACA+TGG | - | chr8_1:69601239-69601258 | Msa1210580:intron | 55.0% | |
| GATCAACATAGATCCGGCCC+TGG | - | chr8_1:69601261-69601280 | Msa1210580:intron | 55.0% | |
| GGTGCCTATGTGAATCCTGG+TGG | - | chr8_1:69602096-69602115 | Msa1210580:CDS | 55.0% | |
| TCGACAGTATGGGCGCCTAG+AGG | - | chr8_1:69599981-69600000 | Msa1210580:CDS | 60.0% | |
| CAGTATGGGCGCCTAGAGGA+TGG | - | chr8_1:69599985-69600004 | Msa1210580:CDS | 60.0% | |
| CGACGCAGAACCGGAACCAA+TGG | + | chr8_1:69600409-69600428 | None:intergenic | 60.0% | |
| CAACATAGATCCGGCCCTGG+TGG | - | chr8_1:69601264-69601283 | Msa1210580:intron | 60.0% | |
| TCGACAGTATGGGCGCCTAG+AGG | - | chr8_1:69599981-69600000 | Msa1210580:CDS | 60.0% | |
| CAGTATGGGCGCCTAGAGGA+TGG | - | chr8_1:69599985-69600004 | Msa1210580:CDS | 60.0% | |
| CGACGCAGAACCGGAACCAA+TGG | + | chr8_1:69600409-69600428 | None:intergenic | 60.0% | |
| CAACATAGATCCGGCCCTGG+TGG | - | chr8_1:69601264-69601283 | Msa1210580:intron | 60.0% | |
| TTCCGGTTCTGCGTCGGGCA+TGG | - | chr8_1:69600413-69600432 | Msa1210580:intron | 65.0% | |
| TTCCGGTTCTGCGTCGGGCA+TGG | - | chr8_1:69600413-69600432 | Msa1210580:intron | 65.0% | |
| CGCCATGCCCGACGCAGAAC+CGG | + | chr8_1:69600418-69600437 | None:intergenic | 70.0% | |
| CGGTTCTGCGTCGGGCATGG+CGG | - | chr8_1:69600416-69600435 | Msa1210580:intron | 70.0% | |
| CGCCATGCCCGACGCAGAAC+CGG | + | chr8_1:69600418-69600437 | None:intergenic | 70.0% | |
| CGGTTCTGCGTCGGGCATGG+CGG | - | chr8_1:69600416-69600435 | Msa1210580:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 69599893 | 69602261 | 69599893 | ID=Msa1210580;Name=Msa1210580 |
| chr8_1 | mRNA | 69599893 | 69602261 | 69599893 | ID=Msa1210580-mRNA-1;Parent=Msa1210580;Name=Msa1210580-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.2|0.16|0.83|1|1|6|43|332 |
| chr8_1 | exon | 69599893 | 69600109 | 69599893 | ID=Msa1210580-mRNA-1:exon:23302;Parent=Msa1210580-mRNA-1 |
| chr8_1 | exon | 69600303 | 69600394 | 69600303 | ID=Msa1210580-mRNA-1:exon:23301;Parent=Msa1210580-mRNA-1 |
| chr8_1 | exon | 69600502 | 69600639 | 69600502 | ID=Msa1210580-mRNA-1:exon:23300;Parent=Msa1210580-mRNA-1 |
| chr8_1 | exon | 69601485 | 69601956 | 69601485 | ID=Msa1210580-mRNA-1:exon:23299;Parent=Msa1210580-mRNA-1 |
| chr8_1 | exon | 69602074 | 69602175 | 69602074 | ID=Msa1210580-mRNA-1:exon:23298;Parent=Msa1210580-mRNA-1 |
| chr8_1 | exon | 69602241 | 69602261 | 69602241 | ID=Msa1210580-mRNA-1:exon:23297;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69602241 | 69602261 | 69602241 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69602074 | 69602175 | 69602074 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69601485 | 69601956 | 69601485 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69600502 | 69600639 | 69600502 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69600303 | 69600394 | 69600303 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | CDS | 69599936 | 69600109 | 69599936 | ID=Msa1210580-mRNA-1:cds;Parent=Msa1210580-mRNA-1 |
| chr8_1 | three_prime_UTR | 69599893 | 69599935 | 69599893 | ID=Msa1210580-mRNA-1:three_prime_utr;Parent=Msa1210580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
