Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210990 | sp|Q9SB04|ARR5_ARATH | 65.922 | 179 | 57 | 3 | 5 | 180 | 2 | 179 | 1.91e-74 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210990 | G7JNT1 | 97.674 | 215 | 3 | 1 | 1 | 213 | 1 | 215 | 1.49e-145 | 413 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1210990 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1210990 | Msa1299140 | 0.862563 | 4.638220e-64 | -8.615850e-47 |
| Msa1210990 | Msa1334870 | 0.971577 | 2.208869e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210990 | MtrunA17_Chr4g0059571 | 97.209 | 215 | 3 | 2 | 1 | 213 | 1 | 214 | 2.21e-146 | 406 |
| Msa1210990 | MtrunA17_Chr3g0118211 | 71.028 | 214 | 47 | 6 | 1 | 213 | 1 | 200 | 4.19e-95 | 276 |
| Msa1210990 | MtrunA17_Chr5g0414931 | 71.528 | 144 | 36 | 2 | 25 | 164 | 15 | 157 | 4.01e-63 | 196 |
| Msa1210990 | MtrunA17_Chr1g0170741 | 69.718 | 142 | 39 | 2 | 21 | 159 | 3 | 143 | 8.48e-62 | 191 |
| Msa1210990 | MtrunA17_Chr7g0256551 | 55.215 | 163 | 63 | 3 | 21 | 174 | 4 | 165 | 8.62e-55 | 174 |
| Msa1210990 | MtrunA17_Chr8g0352871 | 55.090 | 167 | 64 | 3 | 21 | 178 | 4 | 168 | 3.21e-53 | 168 |
| Msa1210990 | MtrunA17_Chr3g0082861 | 52.381 | 168 | 62 | 3 | 24 | 178 | 2 | 164 | 9.41e-50 | 159 |
| Msa1210990 | MtrunA17_Chr3g0128691 | 58.647 | 133 | 50 | 2 | 27 | 156 | 19 | 149 | 1.71e-48 | 155 |
| Msa1210990 | MtrunA17_Chr3g0124861 | 50.667 | 150 | 54 | 3 | 25 | 156 | 21 | 168 | 4.54e-44 | 147 |
| Msa1210990 | MtrunA17_Chr4g0021731 | 55.682 | 88 | 39 | 0 | 16 | 103 | 1 | 88 | 3.51e-25 | 94.4 |
| Msa1210990 | MtrunA17_Chr3g0123131 | 31.690 | 142 | 81 | 5 | 20 | 161 | 14 | 139 | 8.76e-15 | 72.4 |
| Msa1210990 | MtrunA17_Chr7g0275891 | 34.351 | 131 | 74 | 3 | 26 | 156 | 9 | 127 | 9.86e-15 | 71.6 |
| Msa1210990 | MtrunA17_Chr7g0275401 | 33.588 | 131 | 74 | 3 | 26 | 156 | 9 | 126 | 5.17e-14 | 69.3 |
| Msa1210990 | MtrunA17_Chr8g0345901 | 29.545 | 132 | 83 | 2 | 28 | 159 | 38 | 159 | 7.74e-14 | 69.7 |
| Msa1210990 | MtrunA17_Chr8g0376881 | 30.070 | 143 | 84 | 4 | 20 | 162 | 26 | 152 | 1.82e-13 | 68.6 |
| Msa1210990 | MtrunA17_Chr1g0149851 | 32.061 | 131 | 76 | 2 | 26 | 156 | 9 | 126 | 4.80e-13 | 67.4 |
| Msa1210990 | MtrunA17_Chr3g0127941 | 29.771 | 131 | 82 | 2 | 26 | 156 | 56 | 176 | 7.01e-13 | 67.0 |
| Msa1210990 | MtrunA17_Chr1g0149841 | 31.298 | 131 | 77 | 2 | 26 | 156 | 9 | 126 | 1.05e-12 | 66.2 |
| Msa1210990 | MtrunA17_Chr7g0276361 | 26.415 | 159 | 107 | 3 | 26 | 184 | 14 | 162 | 7.30e-12 | 63.9 |
| Msa1210990 | MtrunA17_Chr4g0030271 | 30.534 | 131 | 81 | 2 | 26 | 156 | 89 | 209 | 1.12e-11 | 63.5 |
| Msa1210990 | MtrunA17_Chr1g0181811 | 29.771 | 131 | 82 | 3 | 26 | 156 | 85 | 205 | 6.63e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210990 | AT3G48100.1 | 65.922 | 179 | 57 | 3 | 5 | 180 | 2 | 179 | 1.94e-75 | 226 |
| Msa1210990 | AT5G62920.1 | 73.203 | 153 | 40 | 1 | 26 | 178 | 25 | 176 | 5.79e-72 | 217 |
| Msa1210990 | AT1G74890.1 | 72.483 | 149 | 37 | 3 | 25 | 170 | 17 | 164 | 6.17e-68 | 207 |
| Msa1210990 | AT1G59940.1 | 58.000 | 200 | 73 | 4 | 16 | 206 | 23 | 220 | 5.27e-67 | 206 |
| Msa1210990 | AT1G19050.1 | 63.158 | 171 | 46 | 4 | 3 | 167 | 2 | 161 | 2.84e-66 | 203 |
| Msa1210990 | AT1G10470.3 | 72.340 | 141 | 38 | 1 | 16 | 156 | 10 | 149 | 1.02e-65 | 203 |
| Msa1210990 | AT1G59940.2 | 58.000 | 200 | 73 | 4 | 16 | 206 | 115 | 312 | 1.45e-65 | 205 |
| Msa1210990 | AT1G10470.1 | 72.340 | 141 | 38 | 1 | 16 | 156 | 24 | 163 | 2.50e-65 | 202 |
| Msa1210990 | AT2G40670.2 | 62.222 | 135 | 48 | 1 | 25 | 156 | 28 | 162 | 2.19e-55 | 174 |
| Msa1210990 | AT3G56380.2 | 62.406 | 133 | 49 | 1 | 25 | 156 | 19 | 151 | 8.12e-55 | 172 |
| Msa1210990 | AT3G57040.2 | 58.940 | 151 | 51 | 3 | 21 | 161 | 4 | 153 | 1.65e-53 | 171 |
| Msa1210990 | AT3G57040.1 | 58.940 | 151 | 51 | 3 | 21 | 161 | 4 | 153 | 1.65e-53 | 171 |
| Msa1210990 | AT2G41310.1 | 60.000 | 145 | 49 | 2 | 24 | 160 | 7 | 150 | 3.18e-53 | 171 |
| Msa1210990 | AT2G40670.1 | 61.481 | 135 | 48 | 2 | 25 | 156 | 28 | 161 | 1.45e-52 | 167 |
| Msa1210990 | AT3G56380.1 | 61.654 | 133 | 49 | 2 | 25 | 156 | 19 | 150 | 3.44e-52 | 165 |
| Msa1210990 | AT1G10470.2 | 62.667 | 75 | 27 | 1 | 94 | 167 | 25 | 99 | 7.48e-24 | 94.0 |
| Msa1210990 | AT2G07440.1 | 58.730 | 63 | 26 | 0 | 98 | 160 | 2 | 64 | 2.25e-17 | 75.9 |
| Msa1210990 | AT5G07210.2 | 29.630 | 162 | 100 | 3 | 25 | 186 | 15 | 162 | 7.94e-16 | 75.9 |
| Msa1210990 | AT1G67710.1 | 32.692 | 156 | 89 | 5 | 16 | 168 | 1 | 143 | 8.48e-16 | 75.9 |
| Msa1210990 | AT5G24470.1 | 29.851 | 134 | 84 | 2 | 26 | 159 | 50 | 173 | 7.01e-14 | 70.1 |
| Msa1210990 | AT2G25180.1 | 30.070 | 143 | 84 | 4 | 14 | 156 | 8 | 134 | 1.11e-13 | 69.7 |
| Msa1210990 | AT4G31920.1 | 28.671 | 143 | 86 | 4 | 14 | 156 | 8 | 134 | 9.54e-13 | 67.0 |
| Msa1210990 | AT5G60100.7 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1210990 | AT5G60100.6 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1210990 | AT5G60100.4 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1210990 | AT2G46790.3 | 28.244 | 131 | 84 | 2 | 26 | 156 | 37 | 157 | 4.32e-12 | 64.7 |
| Msa1210990 | AT2G46790.1 | 28.244 | 131 | 84 | 2 | 26 | 156 | 37 | 157 | 5.15e-12 | 64.7 |
| Msa1210990 | AT5G60100.2 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 5.58e-12 | 64.7 |
| Msa1210990 | AT5G60100.5 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1210990 | AT5G60100.3 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1210990 | AT5G60100.1 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1210990 | AT1G49190.1 | 25.926 | 189 | 108 | 5 | 10 | 193 | 21 | 182 | 3.36e-11 | 62.0 |
| Msa1210990 | AT2G27070.1 | 29.560 | 159 | 93 | 5 | 25 | 180 | 15 | 157 | 3.49e-11 | 62.4 |
| Msa1210990 | AT2G01760.1 | 30.380 | 158 | 88 | 7 | 17 | 173 | 5 | 141 | 3.93e-11 | 62.0 |
| Msa1210990 | AT5G02810.1 | 29.771 | 131 | 82 | 3 | 26 | 156 | 78 | 198 | 6.92e-11 | 61.6 |
Find 56 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACATTAGTATTGCAAAAT+TGG | 0.190761 | 8_1:-70358907 | None:intergenic |
| CTCTCATGATAAAATCTTTC+AGG | 0.209124 | 8_1:-70358682 | None:intergenic |
| TAATAAATAGTGAAATAAAA+TGG | 0.211872 | 8_1:-70356809 | None:intergenic |
| TCATAATCTTGATTTCTTAG+AGG | 0.316444 | 8_1:-70358855 | None:intergenic |
| TGGTTAACAAATTCAAAATA+TGG | 0.321894 | 8_1:-70358928 | None:intergenic |
| GTCGAATTTGACGGAGTTGA+TGG | 0.327382 | 8_1:+70357022 | Msa1210990:CDS |
| TTCACTAATTTGCAGGTGTT+TGG | 0.354372 | 8_1:+70358604 | Msa1210990:intron |
| TTGCAAAATTGGAGAAATAT+AGG | 0.385342 | 8_1:-70358896 | None:intergenic |
| TTCTTAGAGGATAATGTTGA+TGG | 0.406515 | 8_1:-70358842 | None:intergenic |
| AATAAATAGTGAAATAAAAT+GGG | 0.412992 | 8_1:-70356808 | None:intergenic |
| GTTATATTTACATGAGCGTT+AGG | 0.414029 | 8_1:-70356871 | None:intergenic |
| AAGAAAGTAAACTGATTTGT+GGG | 0.433428 | 8_1:-70356771 | None:intergenic |
| GAAAATGAGAAATGAAAGAG+TGG | 0.444549 | 8_1:-70356896 | None:intergenic |
| TTGATGGAGGAATCACCTTC+AGG | 0.454395 | 8_1:+70357038 | Msa1210990:CDS |
| TCTAAGATTTAAAATGAGAA+AGG | 0.461855 | 8_1:+70358968 | Msa1210990:three_prime_UTR |
| AAAGAAAGTAAACTGATTTG+TGG | 0.465250 | 8_1:-70356772 | None:intergenic |
| TATTCCATGCCGGGGATGAC+AGG | 0.470500 | 8_1:+70357458 | Msa1210990:CDS |
| CTTACATCTGACAATTTGAC+TGG | 0.476820 | 8_1:-70358656 | None:intergenic |
| CTAAGATTTAAAATGAGAAA+GGG | 0.490694 | 8_1:+70358969 | Msa1210990:three_prime_UTR |
| ATGACGGATTATTCCATGCC+GGG | 0.493470 | 8_1:+70357449 | Msa1210990:CDS |
| CAGTTTGCTATGGCTGCCGC+CGG | 0.493752 | 8_1:+70356987 | Msa1210990:exon |
| ATTCATTGTTCAGTTTGCTA+TGG | 0.498719 | 8_1:+70356977 | Msa1210990:exon |
| GATGGAGAGAACAGTGATGT+TGG | 0.500241 | 8_1:+70357301 | Msa1210990:CDS |
| GAGGAATCACCTTCAGGTGC+AGG | 0.503243 | 8_1:+70357044 | Msa1210990:CDS |
| TTGAAGATTTCTTCATGCAA+AGG | 0.508242 | 8_1:+70357128 | Msa1210990:CDS |
| GAAGGTTAATTTGATAATGA+CGG | 0.519870 | 8_1:+70357433 | Msa1210990:CDS |
| ACTAATTTGCAGGTGTTTGG+AGG | 0.520826 | 8_1:+70358607 | Msa1210990:intron |
| ATTTGCAGGTGTTTGGAGGA+AGG | 0.521653 | 8_1:+70358611 | Msa1210990:intron |
| TGAATTACTCAAGAAAATCA+AGG | 0.543151 | 8_1:+70357484 | Msa1210990:CDS |
| AATTCATATCCTGTCATCCC+CGG | 0.556181 | 8_1:-70357467 | None:intergenic |
| TCCGACGACATGATCACCAC+TGG | 0.559021 | 8_1:-70357677 | None:intergenic |
| GTGTTTGGAGGAAGGAGCAG+AGG | 0.569038 | 8_1:+70358619 | Msa1210990:CDS |
| AAAATGAGAAATGAAAGAGT+GGG | 0.574293 | 8_1:-70356895 | None:intergenic |
| CGTTAGGAAAGAGAAAATGA+AGG | 0.576825 | 8_1:-70356855 | None:intergenic |
| ATATCCTGTCATCCCCGGCA+TGG | 0.579959 | 8_1:-70357462 | None:intergenic |
| AGAGTACAAACTGTATAGAC+TGG | 0.582714 | 8_1:-70358948 | None:intergenic |
| GATAATGTTGATGGCGAGAG+TGG | 0.585842 | 8_1:-70358833 | None:intergenic |
| GTTATGGTGGCAGGGTGTGA+AGG | 0.590843 | 8_1:+70357415 | Msa1210990:intron |
| TCAACTCCGTCAAATTCGAC+CGG | 0.594767 | 8_1:-70357019 | None:intergenic |
| TCCAGTGGTGATCATGTCGT+CGG | 0.595178 | 8_1:+70357676 | Msa1210990:CDS |
| TGCAATTCACCTGCACCTGA+AGG | 0.595358 | 8_1:-70357053 | None:intergenic |
| AATGACGGATTATTCCATGC+CGG | 0.601249 | 8_1:+70357448 | Msa1210990:CDS |
| TATCATGAGAGGTGAAGTGA+AGG | 0.611120 | 8_1:+70358694 | Msa1210990:CDS |
| AAATGAGAAATGAAAGAGTG+GGG | 0.614893 | 8_1:-70356894 | None:intergenic |
| ATGAGAGGTGAAGTGAAGGA+TGG | 0.617352 | 8_1:+70358698 | Msa1210990:CDS |
| GGATCACATGAATGACGCAT+TGG | 0.617664 | 8_1:-70358791 | None:intergenic |
| ATTCGACCGGAAAATCTCGC+CGG | 0.617787 | 8_1:-70357006 | None:intergenic |
| GAATTTGACGGAGTTGATGG+AGG | 0.621403 | 8_1:+70357025 | Msa1210990:CDS |
| GAGAATGTAGTTGATAGAGA+TGG | 0.621435 | 8_1:-70358767 | None:intergenic |
| GTTAGGAAAGAGAAAATGAA+GGG | 0.630292 | 8_1:-70356854 | None:intergenic |
| TGACGGATTATTCCATGCCG+GGG | 0.653217 | 8_1:+70357450 | Msa1210990:CDS |
| AGAAAGTAAACTGATTTGTG+GGG | 0.664841 | 8_1:-70356770 | None:intergenic |
| CGACCGGAAAATCTCGCCGG+CGG | 0.669618 | 8_1:-70357003 | None:intergenic |
| AATGAGAAATGAAAGAGTGG+GGG | 0.683813 | 8_1:-70356893 | None:intergenic |
| GGTGAGAACACTGACGATGG+TGG | 0.724751 | 8_1:-70358812 | None:intergenic |
| AGTGGTGAGAACACTGACGA+TGG | 0.780723 | 8_1:-70358815 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAGTGAAATAAAAT+GGG | - | chr8_1:70356811-70356830 | None:intergenic | 10.0% |
| !! | TAATAAATAGTGAAATAAAA+TGG | - | chr8_1:70356812-70356831 | None:intergenic | 10.0% |
| !!! | TTTGTTTCTTTTTATTTTTT+TGG | - | chr8_1:70358319-70358338 | None:intergenic | 10.0% |
| !! | AATAAAAAGAAACAAATAAA+AGG | + | chr8_1:70358323-70358342 | Msa1210990:intron | 10.0% |
| !! | AATAAATAGTGAAATAAAAT+GGG | - | chr8_1:70356811-70356830 | None:intergenic | 10.0% |
| !! | TAATAAATAGTGAAATAAAA+TGG | - | chr8_1:70356812-70356831 | None:intergenic | 10.0% |
| !!! | TTTGTTTCTTTTTATTTTTT+TGG | - | chr8_1:70358319-70358338 | None:intergenic | 10.0% |
| !! | AATAAAAAGAAACAAATAAA+AGG | + | chr8_1:70358323-70358342 | Msa1210990:intron | 10.0% |
| !!! | ATTTTGAAATTTTATATTGG+AGG | + | chr8_1:70357584-70357603 | Msa1210990:intron | 15.0% |
| !! | AAACAAATAAAAGGAATATT+TGG | + | chr8_1:70358332-70358351 | Msa1210990:intron | 15.0% |
| !! | ATATGTACATTTGTATTATA+TGG | + | chr8_1:70358442-70358461 | Msa1210990:intron | 15.0% |
| !!! | ATTTTGAAATTTTATATTGG+AGG | + | chr8_1:70357584-70357603 | Msa1210990:intron | 15.0% |
| !! | AAACAAATAAAAGGAATATT+TGG | + | chr8_1:70358332-70358351 | Msa1210990:intron | 15.0% |
| !! | ATATGTACATTTGTATTATA+TGG | + | chr8_1:70358442-70358461 | Msa1210990:intron | 15.0% |
| !!! | AATGTTTTTTGTTTCAGTTA+CGG | + | chr8_1:70357237-70357256 | Msa1210990:intron | 20.0% |
| !! | CAAGGTGATTAATTAATTAT+TGG | + | chr8_1:70357502-70357521 | Msa1210990:intron | 20.0% |
| !!! | TTATTTGTTAACACTAAGAA+CGG | + | chr8_1:70358001-70358020 | Msa1210990:intron | 20.0% |
| !!! | ACAAATGTACATATTCTTTT+GGG | - | chr8_1:70358436-70358455 | None:intergenic | 20.0% |
| !!! | TACAAATGTACATATTCTTT+TGG | - | chr8_1:70358437-70358456 | None:intergenic | 20.0% |
| !! | AAATAAAACTATTAAGAAGC+AGG | - | chr8_1:70358585-70358604 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCACTAATTTGC+AGG | + | chr8_1:70358597-70358616 | Msa1210990:intron | 20.0% |
| !! | TGGTTAACAAATTCAAAATA+TGG | - | chr8_1:70358931-70358950 | None:intergenic | 20.0% |
| !!! | TCTAAGATTTAAAATGAGAA+AGG | + | chr8_1:70358968-70358987 | Msa1210990:three_prime_UTR | 20.0% |
| !!! | CTAAGATTTAAAATGAGAAA+GGG | + | chr8_1:70358969-70358988 | Msa1210990:three_prime_UTR | 20.0% |
| !!! | ATAACAGAATCACTATTTTT+TGG | + | chr8_1:70358999-70359018 | Msa1210990:three_prime_UTR | 20.0% |
| !!! | AATGTTTTTTGTTTCAGTTA+CGG | + | chr8_1:70357237-70357256 | Msa1210990:intron | 20.0% |
| !! | CAAGGTGATTAATTAATTAT+TGG | + | chr8_1:70357502-70357521 | Msa1210990:intron | 20.0% |
| !!! | TTATTTGTTAACACTAAGAA+CGG | + | chr8_1:70358001-70358020 | Msa1210990:intron | 20.0% |
| !!! | ACAAATGTACATATTCTTTT+GGG | - | chr8_1:70358436-70358455 | None:intergenic | 20.0% |
| !!! | TACAAATGTACATATTCTTT+TGG | - | chr8_1:70358437-70358456 | None:intergenic | 20.0% |
| !! | AAATAAAACTATTAAGAAGC+AGG | - | chr8_1:70358585-70358604 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCACTAATTTGC+AGG | + | chr8_1:70358597-70358616 | Msa1210990:intron | 20.0% |
| !! | TGGTTAACAAATTCAAAATA+TGG | - | chr8_1:70358931-70358950 | None:intergenic | 20.0% |
| !!! | TCTAAGATTTAAAATGAGAA+AGG | + | chr8_1:70358968-70358987 | Msa1210990:three_prime_UTR | 20.0% |
| !!! | CTAAGATTTAAAATGAGAAA+GGG | + | chr8_1:70358969-70358988 | Msa1210990:three_prime_UTR | 20.0% |
| !!! | ATAACAGAATCACTATTTTT+TGG | + | chr8_1:70358999-70359018 | Msa1210990:three_prime_UTR | 20.0% |
| ! | AAAATGAGAAATGAAAGAGT+GGG | - | chr8_1:70356898-70356917 | None:intergenic | 25.0% |
| ! | ATGTAAGCAAATTATGTTTC+TGG | + | chr8_1:70357329-70357348 | Msa1210990:intron | 25.0% |
| ! | TCTGGATTATTAACTTTGTT+TGG | + | chr8_1:70357347-70357366 | Msa1210990:intron | 25.0% |
| !! | ACTTTGTTTGGATGTTAATT+TGG | + | chr8_1:70357359-70357378 | Msa1210990:intron | 25.0% |
| !!! | GTTGTTGTTTTGTTATGTTA+TGG | + | chr8_1:70357399-70357418 | Msa1210990:intron | 25.0% |
| !!! | GAAGGTTAATTTGATAATGA+CGG | + | chr8_1:70357433-70357452 | Msa1210990:CDS | 25.0% |
| ! | TGAATTACTCAAGAAAATCA+AGG | + | chr8_1:70357484-70357503 | Msa1210990:CDS | 25.0% |
| !! | TGAAATTTTATATTGGAGGA+AGG | + | chr8_1:70357588-70357607 | Msa1210990:intron | 25.0% |
| ! | CAGATTAGATGCATATTTAT+GGG | - | chr8_1:70357867-70357886 | None:intergenic | 25.0% |
| ! | GAATTTATTTCCTGATTAAG+TGG | - | chr8_1:70357890-70357909 | None:intergenic | 25.0% |
| ! | ACAAATAAACTTAAGTAGCA+TGG | - | chr8_1:70357989-70358008 | None:intergenic | 25.0% |
| !! | TGATTCAAGTTAAAAGAGTT+GGG | - | chr8_1:70358165-70358184 | None:intergenic | 25.0% |
| !! | ATGTTTTCATACGATTGATA+AGG | - | chr8_1:70358260-70358279 | None:intergenic | 25.0% |
| !! | ATATTTGGCAAGAATCTTTT+AGG | + | chr8_1:70358347-70358366 | Msa1210990:intron | 25.0% |
| ! | TCATAATCTTGATTTCTTAG+AGG | - | chr8_1:70358858-70358877 | None:intergenic | 25.0% |
| ! | TTGCAAAATTGGAGAAATAT+AGG | - | chr8_1:70358899-70358918 | None:intergenic | 25.0% |
| !!! | AAAGAAAGTAAACTGATTTG+TGG | - | chr8_1:70356775-70356794 | None:intergenic | 25.0% |
| ! | AAAATGAGAAATGAAAGAGT+GGG | - | chr8_1:70356898-70356917 | None:intergenic | 25.0% |
| ! | ATGTAAGCAAATTATGTTTC+TGG | + | chr8_1:70357329-70357348 | Msa1210990:intron | 25.0% |
| ! | TCTGGATTATTAACTTTGTT+TGG | + | chr8_1:70357347-70357366 | Msa1210990:intron | 25.0% |
| !! | ACTTTGTTTGGATGTTAATT+TGG | + | chr8_1:70357359-70357378 | Msa1210990:intron | 25.0% |
| !!! | GTTGTTGTTTTGTTATGTTA+TGG | + | chr8_1:70357399-70357418 | Msa1210990:intron | 25.0% |
| !!! | GAAGGTTAATTTGATAATGA+CGG | + | chr8_1:70357433-70357452 | Msa1210990:CDS | 25.0% |
| ! | TGAATTACTCAAGAAAATCA+AGG | + | chr8_1:70357484-70357503 | Msa1210990:CDS | 25.0% |
| !! | TGAAATTTTATATTGGAGGA+AGG | + | chr8_1:70357588-70357607 | Msa1210990:intron | 25.0% |
| ! | CAGATTAGATGCATATTTAT+GGG | - | chr8_1:70357867-70357886 | None:intergenic | 25.0% |
| ! | GAATTTATTTCCTGATTAAG+TGG | - | chr8_1:70357890-70357909 | None:intergenic | 25.0% |
| ! | ACAAATAAACTTAAGTAGCA+TGG | - | chr8_1:70357989-70358008 | None:intergenic | 25.0% |
| !! | TGATTCAAGTTAAAAGAGTT+GGG | - | chr8_1:70358165-70358184 | None:intergenic | 25.0% |
| !! | ATGTTTTCATACGATTGATA+AGG | - | chr8_1:70358260-70358279 | None:intergenic | 25.0% |
| !! | ATATTTGGCAAGAATCTTTT+AGG | + | chr8_1:70358347-70358366 | Msa1210990:intron | 25.0% |
| ! | TCATAATCTTGATTTCTTAG+AGG | - | chr8_1:70358858-70358877 | None:intergenic | 25.0% |
| ! | TTGCAAAATTGGAGAAATAT+AGG | - | chr8_1:70358899-70358918 | None:intergenic | 25.0% |
| GTTAGGAAAGAGAAAATGAA+GGG | - | chr8_1:70356857-70356876 | None:intergenic | 30.0% | |
| GTTATATTTACATGAGCGTT+AGG | - | chr8_1:70356874-70356893 | None:intergenic | 30.0% | |
| AAATGAGAAATGAAAGAGTG+GGG | - | chr8_1:70356897-70356916 | None:intergenic | 30.0% | |
| GAAAATGAGAAATGAAAGAG+TGG | - | chr8_1:70356899-70356918 | None:intergenic | 30.0% | |
| GAAAAGAAACTGAAAAACAC+AGG | - | chr8_1:70356932-70356951 | None:intergenic | 30.0% | |
| !! | ATTCATTGTTCAGTTTGCTA+TGG | + | chr8_1:70356977-70356996 | Msa1210990:exon | 30.0% |
| TTGAAGATTTCTTCATGCAA+AGG | + | chr8_1:70357128-70357147 | Msa1210990:CDS | 30.0% | |
| !! | GTTGTTTTGTTATGTTATGG+TGG | + | chr8_1:70357402-70357421 | Msa1210990:intron | 30.0% |
| ! | AATTTTATATTGGAGGAAGG+TGG | + | chr8_1:70357591-70357610 | Msa1210990:intron | 30.0% |
| !!! | ATGTTTTGACTCGAATTGAT+AGG | + | chr8_1:70357702-70357721 | Msa1210990:CDS | 30.0% |
| !! | CTTTTGATTCTAGTGTGATT+TGG | + | chr8_1:70357749-70357768 | Msa1210990:intron | 30.0% |
| TGGTGAATAACATGTGTATT+TGG | + | chr8_1:70357773-70357792 | Msa1210990:intron | 30.0% | |
| GCAGATTAGATGCATATTTA+TGG | - | chr8_1:70357868-70357887 | None:intergenic | 30.0% | |
| TTATGCCTCCATATCTATTT+GGG | - | chr8_1:70357924-70357943 | None:intergenic | 30.0% | |
| TGTTTCAAATCACTCAGATA+GGG | + | chr8_1:70358063-70358082 | Msa1210990:intron | 30.0% | |
| GAAATCTGGAGAACTTAATT+TGG | - | chr8_1:70358134-70358153 | None:intergenic | 30.0% | |
| ! | CTGATTCAAGTTAAAAGAGT+TGG | - | chr8_1:70358166-70358185 | None:intergenic | 30.0% |
| TTGGAACTCGAATAAGTTTA+TGG | + | chr8_1:70358213-70358232 | Msa1210990:intron | 30.0% | |
| !! | TATGGTGTTATTTGTTTCCT+TGG | + | chr8_1:70358231-70358250 | Msa1210990:intron | 30.0% |
| ATTACAATTACATCGGTAGA+AGG | - | chr8_1:70358384-70358403 | None:intergenic | 30.0% | |
| TGTGGCAATTACAATTACAT+CGG | - | chr8_1:70358391-70358410 | None:intergenic | 30.0% | |
| ATGTAATTGTAATTGCCACA+CGG | + | chr8_1:70358391-70358410 | Msa1210990:intron | 30.0% | |
| ! | TGTATTATATGGAGTGCTTT+AGG | + | chr8_1:70358453-70358472 | Msa1210990:intron | 30.0% |
| ACATTTACTTTCTATGCTGT+GGG | + | chr8_1:70358542-70358561 | Msa1210990:intron | 30.0% | |
| CTCTCATGATAAAATCTTTC+AGG | - | chr8_1:70358685-70358704 | None:intergenic | 30.0% | |
| ! | CTGAAAGATTTTATCATGAG+AGG | + | chr8_1:70358683-70358702 | Msa1210990:CDS | 30.0% |
| TTCTTAGAGGATAATGTTGA+TGG | - | chr8_1:70358845-70358864 | None:intergenic | 30.0% | |
| GGACATTAGTATTGCAAAAT+TGG | - | chr8_1:70358910-70358929 | None:intergenic | 30.0% | |
| GTTAGGAAAGAGAAAATGAA+GGG | - | chr8_1:70356857-70356876 | None:intergenic | 30.0% | |
| GTTATATTTACATGAGCGTT+AGG | - | chr8_1:70356874-70356893 | None:intergenic | 30.0% | |
| AAATGAGAAATGAAAGAGTG+GGG | - | chr8_1:70356897-70356916 | None:intergenic | 30.0% | |
| GAAAATGAGAAATGAAAGAG+TGG | - | chr8_1:70356899-70356918 | None:intergenic | 30.0% | |
| GAAAAGAAACTGAAAAACAC+AGG | - | chr8_1:70356932-70356951 | None:intergenic | 30.0% | |
| !! | ATTCATTGTTCAGTTTGCTA+TGG | + | chr8_1:70356977-70356996 | Msa1210990:exon | 30.0% |
| TTGAAGATTTCTTCATGCAA+AGG | + | chr8_1:70357128-70357147 | Msa1210990:CDS | 30.0% | |
| !! | GTTGTTTTGTTATGTTATGG+TGG | + | chr8_1:70357402-70357421 | Msa1210990:intron | 30.0% |
| ! | AATTTTATATTGGAGGAAGG+TGG | + | chr8_1:70357591-70357610 | Msa1210990:intron | 30.0% |
| !!! | ATGTTTTGACTCGAATTGAT+AGG | + | chr8_1:70357702-70357721 | Msa1210990:CDS | 30.0% |
| !! | CTTTTGATTCTAGTGTGATT+TGG | + | chr8_1:70357749-70357768 | Msa1210990:intron | 30.0% |
| TGGTGAATAACATGTGTATT+TGG | + | chr8_1:70357773-70357792 | Msa1210990:intron | 30.0% | |
| GCAGATTAGATGCATATTTA+TGG | - | chr8_1:70357868-70357887 | None:intergenic | 30.0% | |
| TTATGCCTCCATATCTATTT+GGG | - | chr8_1:70357924-70357943 | None:intergenic | 30.0% | |
| TGTTTCAAATCACTCAGATA+GGG | + | chr8_1:70358063-70358082 | Msa1210990:intron | 30.0% | |
| GAAATCTGGAGAACTTAATT+TGG | - | chr8_1:70358134-70358153 | None:intergenic | 30.0% | |
| ! | CTGATTCAAGTTAAAAGAGT+TGG | - | chr8_1:70358166-70358185 | None:intergenic | 30.0% |
| TTGGAACTCGAATAAGTTTA+TGG | + | chr8_1:70358213-70358232 | Msa1210990:intron | 30.0% | |
| !! | TATGGTGTTATTTGTTTCCT+TGG | + | chr8_1:70358231-70358250 | Msa1210990:intron | 30.0% |
| ATTACAATTACATCGGTAGA+AGG | - | chr8_1:70358384-70358403 | None:intergenic | 30.0% | |
| TGTGGCAATTACAATTACAT+CGG | - | chr8_1:70358391-70358410 | None:intergenic | 30.0% | |
| ATGTAATTGTAATTGCCACA+CGG | + | chr8_1:70358391-70358410 | Msa1210990:intron | 30.0% | |
| ! | TGTATTATATGGAGTGCTTT+AGG | + | chr8_1:70358453-70358472 | Msa1210990:intron | 30.0% |
| ACATTTACTTTCTATGCTGT+GGG | + | chr8_1:70358542-70358561 | Msa1210990:intron | 30.0% | |
| CTCTCATGATAAAATCTTTC+AGG | - | chr8_1:70358685-70358704 | None:intergenic | 30.0% | |
| ! | CTGAAAGATTTTATCATGAG+AGG | + | chr8_1:70358683-70358702 | Msa1210990:CDS | 30.0% |
| TTCTTAGAGGATAATGTTGA+TGG | - | chr8_1:70358845-70358864 | None:intergenic | 30.0% | |
| GGACATTAGTATTGCAAAAT+TGG | - | chr8_1:70358910-70358929 | None:intergenic | 30.0% | |
| CGTTAGGAAAGAGAAAATGA+AGG | - | chr8_1:70356858-70356877 | None:intergenic | 35.0% | |
| AATGAGAAATGAAAGAGTGG+GGG | - | chr8_1:70356896-70356915 | None:intergenic | 35.0% | |
| !! | TTTTGTTATGTTATGGTGGC+AGG | + | chr8_1:70357406-70357425 | Msa1210990:intron | 35.0% |
| ! | TTTGTTATGTTATGGTGGCA+GGG | + | chr8_1:70357407-70357426 | Msa1210990:intron | 35.0% |
| CTGCTGAAATTAACACAAAC+AGG | - | chr8_1:70357633-70357652 | None:intergenic | 35.0% | |
| CTGTTTGTGTTAATTTCAGC+AGG | + | chr8_1:70357631-70357650 | Msa1210990:intron | 35.0% | |
| ! | TGATTCTAGTGTGATTTGGA+TGG | + | chr8_1:70357753-70357772 | Msa1210990:intron | 35.0% |
| GTTCCTACTGAATTCTAATC+TGG | + | chr8_1:70357825-70357844 | Msa1210990:intron | 35.0% | |
| ACACCAGATTAGAATTCAGT+AGG | - | chr8_1:70357831-70357850 | None:intergenic | 35.0% | |
| ! | ATCTAATCTGCCACTTAATC+AGG | + | chr8_1:70357877-70357896 | Msa1210990:intron | 35.0% |
| GTGTAGATCCCAAATAGATA+TGG | + | chr8_1:70357913-70357932 | Msa1210990:intron | 35.0% | |
| TAGATCCCAAATAGATATGG+AGG | + | chr8_1:70357916-70357935 | Msa1210990:intron | 35.0% | |
| CTTATGCCTCCATATCTATT+TGG | - | chr8_1:70357925-70357944 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAGCTCCAT+AGG | + | chr8_1:70357952-70357971 | Msa1210990:intron | 35.0% | |
| GTGTTTCAAATCACTCAGAT+AGG | + | chr8_1:70358062-70358081 | Msa1210990:intron | 35.0% | |
| TTAAAAGAGTTGGGTCTTCA+GGG | - | chr8_1:70358156-70358175 | None:intergenic | 35.0% | |
| CAATAATATGTAGAACCGTG+TGG | - | chr8_1:70358409-70358428 | None:intergenic | 35.0% | |
| CACATTTACTTTCTATGCTG+TGG | + | chr8_1:70358541-70358560 | Msa1210990:intron | 35.0% | |
| AAACTATTAAGAAGCAGGAC+AGG | - | chr8_1:70358580-70358599 | None:intergenic | 35.0% | |
| ! | TTCACTAATTTGCAGGTGTT+TGG | + | chr8_1:70358604-70358623 | Msa1210990:intron | 35.0% |
| CTTACATCTGACAATTTGAC+TGG | - | chr8_1:70358659-70358678 | None:intergenic | 35.0% | |
| !! | GAGAATGTAGTTGATAGAGA+TGG | - | chr8_1:70358770-70358789 | None:intergenic | 35.0% |
| AGAGTACAAACTGTATAGAC+TGG | - | chr8_1:70358951-70358970 | None:intergenic | 35.0% | |
| CGTTAGGAAAGAGAAAATGA+AGG | - | chr8_1:70356858-70356877 | None:intergenic | 35.0% | |
| AATGAGAAATGAAAGAGTGG+GGG | - | chr8_1:70356896-70356915 | None:intergenic | 35.0% | |
| !! | TTTTGTTATGTTATGGTGGC+AGG | + | chr8_1:70357406-70357425 | Msa1210990:intron | 35.0% |
| ! | TTTGTTATGTTATGGTGGCA+GGG | + | chr8_1:70357407-70357426 | Msa1210990:intron | 35.0% |
| CTGCTGAAATTAACACAAAC+AGG | - | chr8_1:70357633-70357652 | None:intergenic | 35.0% | |
| CTGTTTGTGTTAATTTCAGC+AGG | + | chr8_1:70357631-70357650 | Msa1210990:intron | 35.0% | |
| ! | TGATTCTAGTGTGATTTGGA+TGG | + | chr8_1:70357753-70357772 | Msa1210990:intron | 35.0% |
| GTTCCTACTGAATTCTAATC+TGG | + | chr8_1:70357825-70357844 | Msa1210990:intron | 35.0% | |
| ACACCAGATTAGAATTCAGT+AGG | - | chr8_1:70357831-70357850 | None:intergenic | 35.0% | |
| ! | ATCTAATCTGCCACTTAATC+AGG | + | chr8_1:70357877-70357896 | Msa1210990:intron | 35.0% |
| GTGTAGATCCCAAATAGATA+TGG | + | chr8_1:70357913-70357932 | Msa1210990:intron | 35.0% | |
| TAGATCCCAAATAGATATGG+AGG | + | chr8_1:70357916-70357935 | Msa1210990:intron | 35.0% | |
| CTTATGCCTCCATATCTATT+TGG | - | chr8_1:70357925-70357944 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAGCTCCAT+AGG | + | chr8_1:70357952-70357971 | Msa1210990:intron | 35.0% | |
| GTGTTTCAAATCACTCAGAT+AGG | + | chr8_1:70358062-70358081 | Msa1210990:intron | 35.0% | |
| TTAAAAGAGTTGGGTCTTCA+GGG | - | chr8_1:70358156-70358175 | None:intergenic | 35.0% | |
| CAATAATATGTAGAACCGTG+TGG | - | chr8_1:70358409-70358428 | None:intergenic | 35.0% | |
| CACATTTACTTTCTATGCTG+TGG | + | chr8_1:70358541-70358560 | Msa1210990:intron | 35.0% | |
| AAACTATTAAGAAGCAGGAC+AGG | - | chr8_1:70358580-70358599 | None:intergenic | 35.0% | |
| ! | TTCACTAATTTGCAGGTGTT+TGG | + | chr8_1:70358604-70358623 | Msa1210990:intron | 35.0% |
| CTTACATCTGACAATTTGAC+TGG | - | chr8_1:70358659-70358678 | None:intergenic | 35.0% | |
| !! | GAGAATGTAGTTGATAGAGA+TGG | - | chr8_1:70358770-70358789 | None:intergenic | 35.0% |
| AGAGTACAAACTGTATAGAC+TGG | - | chr8_1:70358951-70358970 | None:intergenic | 35.0% | |
| ! | GATTTTCCGGTCGAATTTGA+CGG | + | chr8_1:70357013-70357032 | Msa1210990:CDS | 40.0% |
| ! | AAGAAGAGCTCTCCAGTTTT+TGG | + | chr8_1:70357273-70357292 | Msa1210990:CDS | 40.0% |
| ! | AGAAGAGCTCTCCAGTTTTT+GGG | + | chr8_1:70357274-70357293 | Msa1210990:CDS | 40.0% |
| !! | AATGACGGATTATTCCATGC+CGG | + | chr8_1:70357448-70357467 | Msa1210990:CDS | 40.0% |
| AATTCATATCCTGTCATCCC+CGG | - | chr8_1:70357470-70357489 | None:intergenic | 40.0% | |
| !! | AGCAGGAGTCTTCTGTTTTT+AGG | + | chr8_1:70357648-70357667 | Msa1210990:intron | 40.0% |
| !!! | GCAGGAGTCTTCTGTTTTTA+GGG | + | chr8_1:70357649-70357668 | Msa1210990:intron | 40.0% |
| !!! | TGTTTTTAGGGAGATTCCAG+TGG | + | chr8_1:70357661-70357680 | Msa1210990:CDS | 40.0% |
| TGAAGTGATTGTAGAGATGC+AGG | + | chr8_1:70358025-70358044 | Msa1210990:intron | 40.0% | |
| GTTAAAAGAGTTGGGTCTTC+AGG | - | chr8_1:70358157-70358176 | None:intergenic | 40.0% | |
| TACGATTGATAAGGTTGCCA+AGG | - | chr8_1:70358251-70358270 | None:intergenic | 40.0% | |
| TGTCGAAAGTTGTTCTTGCT+AGG | - | chr8_1:70358523-70358542 | None:intergenic | 40.0% | |
| TTTACTTTCTATGCTGTGGG+TGG | + | chr8_1:70358545-70358564 | Msa1210990:intron | 40.0% | |
| ! | ACTAATTTGCAGGTGTTTGG+AGG | + | chr8_1:70358607-70358626 | Msa1210990:intron | 40.0% |
| TATCATGAGAGGTGAAGTGA+AGG | + | chr8_1:70358694-70358713 | Msa1210990:CDS | 40.0% | |
| ! | GATTTTCCGGTCGAATTTGA+CGG | + | chr8_1:70357013-70357032 | Msa1210990:CDS | 40.0% |
| ! | AAGAAGAGCTCTCCAGTTTT+TGG | + | chr8_1:70357273-70357292 | Msa1210990:CDS | 40.0% |
| ! | AGAAGAGCTCTCCAGTTTTT+GGG | + | chr8_1:70357274-70357293 | Msa1210990:CDS | 40.0% |
| !! | AATGACGGATTATTCCATGC+CGG | + | chr8_1:70357448-70357467 | Msa1210990:CDS | 40.0% |
| AATTCATATCCTGTCATCCC+CGG | - | chr8_1:70357470-70357489 | None:intergenic | 40.0% | |
| !! | AGCAGGAGTCTTCTGTTTTT+AGG | + | chr8_1:70357648-70357667 | Msa1210990:intron | 40.0% |
| !!! | GCAGGAGTCTTCTGTTTTTA+GGG | + | chr8_1:70357649-70357668 | Msa1210990:intron | 40.0% |
| !!! | TGTTTTTAGGGAGATTCCAG+TGG | + | chr8_1:70357661-70357680 | Msa1210990:CDS | 40.0% |
| TGAAGTGATTGTAGAGATGC+AGG | + | chr8_1:70358025-70358044 | Msa1210990:intron | 40.0% | |
| GTTAAAAGAGTTGGGTCTTC+AGG | - | chr8_1:70358157-70358176 | None:intergenic | 40.0% | |
| TACGATTGATAAGGTTGCCA+AGG | - | chr8_1:70358251-70358270 | None:intergenic | 40.0% | |
| TGTCGAAAGTTGTTCTTGCT+AGG | - | chr8_1:70358523-70358542 | None:intergenic | 40.0% | |
| TTTACTTTCTATGCTGTGGG+TGG | + | chr8_1:70358545-70358564 | Msa1210990:intron | 40.0% | |
| ! | ACTAATTTGCAGGTGTTTGG+AGG | + | chr8_1:70358607-70358626 | Msa1210990:intron | 40.0% |
| TATCATGAGAGGTGAAGTGA+AGG | + | chr8_1:70358694-70358713 | Msa1210990:CDS | 40.0% | |
| TCAACTCCGTCAAATTCGAC+CGG | - | chr8_1:70357022-70357041 | None:intergenic | 45.0% | |
| GTCGAATTTGACGGAGTTGA+TGG | + | chr8_1:70357022-70357041 | Msa1210990:CDS | 45.0% | |
| !! | GAATTTGACGGAGTTGATGG+AGG | + | chr8_1:70357025-70357044 | Msa1210990:CDS | 45.0% |
| TTGATGGAGGAATCACCTTC+AGG | + | chr8_1:70357038-70357057 | Msa1210990:CDS | 45.0% | |
| !!! | AGCTCTCCAGTTTTTGGGAT+TGG | + | chr8_1:70357279-70357298 | Msa1210990:CDS | 45.0% |
| !!! | CTCCAGTTTTTGGGATTGGA+TGG | + | chr8_1:70357283-70357302 | Msa1210990:CDS | 45.0% |
| CTCCATCCAATCCCAAAAAC+TGG | - | chr8_1:70357288-70357307 | None:intergenic | 45.0% | |
| GATGGAGAGAACAGTGATGT+TGG | + | chr8_1:70357301-70357320 | Msa1210990:CDS | 45.0% | |
| !! | ATGACGGATTATTCCATGCC+GGG | + | chr8_1:70357449-70357468 | Msa1210990:CDS | 45.0% |
| CATGGCAAACACAGATCCTA+TGG | - | chr8_1:70357971-70357990 | None:intergenic | 45.0% | |
| ! | TGGCAAGAATCTTTTAGGCC+TGG | + | chr8_1:70358352-70358371 | Msa1210990:intron | 45.0% |
| AGAAGCAGGACAGGATATAC+TGG | - | chr8_1:70358571-70358590 | None:intergenic | 45.0% | |
| ATTTGCAGGTGTTTGGAGGA+AGG | + | chr8_1:70358611-70358630 | Msa1210990:intron | 45.0% | |
| ATGAGAGGTGAAGTGAAGGA+TGG | + | chr8_1:70358698-70358717 | Msa1210990:CDS | 45.0% | |
| GGATCACATGAATGACGCAT+TGG | - | chr8_1:70358794-70358813 | None:intergenic | 45.0% | |
| !! | GATAATGTTGATGGCGAGAG+TGG | - | chr8_1:70358836-70358855 | None:intergenic | 45.0% |
| TCAACTCCGTCAAATTCGAC+CGG | - | chr8_1:70357022-70357041 | None:intergenic | 45.0% | |
| GTCGAATTTGACGGAGTTGA+TGG | + | chr8_1:70357022-70357041 | Msa1210990:CDS | 45.0% | |
| !! | GAATTTGACGGAGTTGATGG+AGG | + | chr8_1:70357025-70357044 | Msa1210990:CDS | 45.0% |
| TTGATGGAGGAATCACCTTC+AGG | + | chr8_1:70357038-70357057 | Msa1210990:CDS | 45.0% | |
| !!! | AGCTCTCCAGTTTTTGGGAT+TGG | + | chr8_1:70357279-70357298 | Msa1210990:CDS | 45.0% |
| !!! | CTCCAGTTTTTGGGATTGGA+TGG | + | chr8_1:70357283-70357302 | Msa1210990:CDS | 45.0% |
| CTCCATCCAATCCCAAAAAC+TGG | - | chr8_1:70357288-70357307 | None:intergenic | 45.0% | |
| GATGGAGAGAACAGTGATGT+TGG | + | chr8_1:70357301-70357320 | Msa1210990:CDS | 45.0% | |
| !! | ATGACGGATTATTCCATGCC+GGG | + | chr8_1:70357449-70357468 | Msa1210990:CDS | 45.0% |
| CATGGCAAACACAGATCCTA+TGG | - | chr8_1:70357971-70357990 | None:intergenic | 45.0% | |
| ! | TGGCAAGAATCTTTTAGGCC+TGG | + | chr8_1:70358352-70358371 | Msa1210990:intron | 45.0% |
| AGAAGCAGGACAGGATATAC+TGG | - | chr8_1:70358571-70358590 | None:intergenic | 45.0% | |
| ATTTGCAGGTGTTTGGAGGA+AGG | + | chr8_1:70358611-70358630 | Msa1210990:intron | 45.0% | |
| ATGAGAGGTGAAGTGAAGGA+TGG | + | chr8_1:70358698-70358717 | Msa1210990:CDS | 45.0% | |
| GGATCACATGAATGACGCAT+TGG | - | chr8_1:70358794-70358813 | None:intergenic | 45.0% | |
| !! | GATAATGTTGATGGCGAGAG+TGG | - | chr8_1:70358836-70358855 | None:intergenic | 45.0% |
| !!! | TTTATTTTGAAATTTTATAT+TGG | + | chr8_1:70357581-70357600 | Msa1210990:intron | 5.0% |
| !!! | TATTTTATTTTTTACTTTAT+TGG | + | chr8_1:70358194-70358213 | Msa1210990:intron | 5.0% |
| !!! | TTTATTTTGAAATTTTATAT+TGG | + | chr8_1:70357581-70357600 | Msa1210990:intron | 5.0% |
| !!! | TATTTTATTTTTTACTTTAT+TGG | + | chr8_1:70358194-70358213 | Msa1210990:intron | 5.0% |
| ATTCGACCGGAAAATCTCGC+CGG | - | chr8_1:70357009-70357028 | None:intergenic | 50.0% | |
| TGCAATTCACCTGCACCTGA+AGG | - | chr8_1:70357056-70357075 | None:intergenic | 50.0% | |
| !! | TGACGGATTATTCCATGCCG+GGG | + | chr8_1:70357450-70357469 | Msa1210990:CDS | 50.0% |
| TCCAGTGGTGATCATGTCGT+CGG | + | chr8_1:70357676-70357695 | Msa1210990:CDS | 50.0% | |
| GTTGGGTCTTCAGGGAAATC+TGG | - | chr8_1:70358148-70358167 | None:intergenic | 50.0% | |
| AGTGGTGAGAACACTGACGA+TGG | - | chr8_1:70358818-70358837 | None:intergenic | 50.0% | |
| ATTCGACCGGAAAATCTCGC+CGG | - | chr8_1:70357009-70357028 | None:intergenic | 50.0% | |
| TGCAATTCACCTGCACCTGA+AGG | - | chr8_1:70357056-70357075 | None:intergenic | 50.0% | |
| !! | TGACGGATTATTCCATGCCG+GGG | + | chr8_1:70357450-70357469 | Msa1210990:CDS | 50.0% |
| TCCAGTGGTGATCATGTCGT+CGG | + | chr8_1:70357676-70357695 | Msa1210990:CDS | 50.0% | |
| GTTGGGTCTTCAGGGAAATC+TGG | - | chr8_1:70358148-70358167 | None:intergenic | 50.0% | |
| AGTGGTGAGAACACTGACGA+TGG | - | chr8_1:70358818-70358837 | None:intergenic | 50.0% | |
| GAGGAATCACCTTCAGGTGC+AGG | + | chr8_1:70357044-70357063 | Msa1210990:CDS | 55.0% | |
| GTTATGGTGGCAGGGTGTGA+AGG | + | chr8_1:70357415-70357434 | Msa1210990:intron | 55.0% | |
| TATTCCATGCCGGGGATGAC+AGG | + | chr8_1:70357458-70357477 | Msa1210990:CDS | 55.0% | |
| ATATCCTGTCATCCCCGGCA+TGG | - | chr8_1:70357465-70357484 | None:intergenic | 55.0% | |
| TCCGACGACATGATCACCAC+TGG | - | chr8_1:70357680-70357699 | None:intergenic | 55.0% | |
| ATCGGTAGAAGGTTGCTGCC+AGG | - | chr8_1:70358373-70358392 | None:intergenic | 55.0% | |
| GTGTTTGGAGGAAGGAGCAG+AGG | + | chr8_1:70358619-70358638 | Msa1210990:CDS | 55.0% | |
| GGTGAGAACACTGACGATGG+TGG | - | chr8_1:70358815-70358834 | None:intergenic | 55.0% | |
| GAGGAATCACCTTCAGGTGC+AGG | + | chr8_1:70357044-70357063 | Msa1210990:CDS | 55.0% | |
| GTTATGGTGGCAGGGTGTGA+AGG | + | chr8_1:70357415-70357434 | Msa1210990:intron | 55.0% | |
| TATTCCATGCCGGGGATGAC+AGG | + | chr8_1:70357458-70357477 | Msa1210990:CDS | 55.0% | |
| ATATCCTGTCATCCCCGGCA+TGG | - | chr8_1:70357465-70357484 | None:intergenic | 55.0% | |
| TCCGACGACATGATCACCAC+TGG | - | chr8_1:70357680-70357699 | None:intergenic | 55.0% | |
| ATCGGTAGAAGGTTGCTGCC+AGG | - | chr8_1:70358373-70358392 | None:intergenic | 55.0% | |
| GTGTTTGGAGGAAGGAGCAG+AGG | + | chr8_1:70358619-70358638 | Msa1210990:CDS | 55.0% | |
| GGTGAGAACACTGACGATGG+TGG | - | chr8_1:70358815-70358834 | None:intergenic | 55.0% | |
| !! | CAGTTTGCTATGGCTGCCGC+CGG | + | chr8_1:70356987-70357006 | Msa1210990:exon | 60.0% |
| !! | CAGTTTGCTATGGCTGCCGC+CGG | + | chr8_1:70356987-70357006 | Msa1210990:exon | 60.0% |
| ! | CTGCCGCCGGCGAGATTTTC+CGG | + | chr8_1:70357000-70357019 | Msa1210990:CDS | 65.0% |
| CGACCGGAAAATCTCGCCGG+CGG | - | chr8_1:70357006-70357025 | None:intergenic | 65.0% | |
| ! | CTGCCGCCGGCGAGATTTTC+CGG | + | chr8_1:70357000-70357019 | Msa1210990:CDS | 65.0% |
| CGACCGGAAAATCTCGCCGG+CGG | - | chr8_1:70357006-70357025 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 70356773 | 70359049 | 70356773 | ID=Msa1210990;Name=Msa1210990 |
| chr8_1 | mRNA | 70356773 | 70359049 | 70356773 | ID=Msa1210990-mRNA-1;Parent=Msa1210990;Name=Msa1210990-mRNA-1;_AED=0.11;_eAED=0.11;_QI=223|0.75|0.8|1|1|1|5|172|213 |
| chr8_1 | exon | 70356773 | 70357149 | 70356773 | ID=Msa1210990-mRNA-1:exon:23510;Parent=Msa1210990-mRNA-1 |
| chr8_1 | exon | 70357254 | 70357330 | 70357254 | ID=Msa1210990-mRNA-1:exon:23511;Parent=Msa1210990-mRNA-1 |
| chr8_1 | exon | 70357428 | 70357505 | 70357428 | ID=Msa1210990-mRNA-1:exon:23512;Parent=Msa1210990-mRNA-1 |
| chr8_1 | exon | 70357650 | 70357723 | 70357650 | ID=Msa1210990-mRNA-1:exon:23513;Parent=Msa1210990-mRNA-1 |
| chr8_1 | exon | 70358619 | 70359049 | 70358619 | ID=Msa1210990-mRNA-1:exon:23514;Parent=Msa1210990-mRNA-1 |
| chr8_1 | five_prime_UTR | 70356773 | 70356995 | 70356773 | ID=Msa1210990-mRNA-1:five_prime_utr;Parent=Msa1210990-mRNA-1 |
| chr8_1 | CDS | 70356996 | 70357149 | 70356996 | ID=Msa1210990-mRNA-1:cds;Parent=Msa1210990-mRNA-1 |
| chr8_1 | CDS | 70357254 | 70357330 | 70357254 | ID=Msa1210990-mRNA-1:cds;Parent=Msa1210990-mRNA-1 |
| chr8_1 | CDS | 70357428 | 70357505 | 70357428 | ID=Msa1210990-mRNA-1:cds;Parent=Msa1210990-mRNA-1 |
| chr8_1 | CDS | 70357650 | 70357723 | 70357650 | ID=Msa1210990-mRNA-1:cds;Parent=Msa1210990-mRNA-1 |
| chr8_1 | CDS | 70358619 | 70358877 | 70358619 | ID=Msa1210990-mRNA-1:cds;Parent=Msa1210990-mRNA-1 |
| chr8_1 | three_prime_UTR | 70358878 | 70359049 | 70358878 | ID=Msa1210990-mRNA-1:three_prime_utr;Parent=Msa1210990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
