AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1299140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299140 MtrunA17_Chr4g0059571 97.209 215 3 2 1 213 1 214 2.21e-146 406
Msa1299140 MtrunA17_Chr3g0118211 71.028 214 47 6 1 213 1 200 4.19e-95 276
Msa1299140 MtrunA17_Chr5g0414931 71.528 144 36 2 25 164 15 157 4.01e-63 196
Msa1299140 MtrunA17_Chr1g0170741 69.718 142 39 2 21 159 3 143 8.48e-62 191
Msa1299140 MtrunA17_Chr7g0256551 55.215 163 63 3 21 174 4 165 8.62e-55 174
Msa1299140 MtrunA17_Chr8g0352871 55.090 167 64 3 21 178 4 168 3.21e-53 168
Msa1299140 MtrunA17_Chr3g0082861 52.381 168 62 3 24 178 2 164 9.41e-50 159
Msa1299140 MtrunA17_Chr3g0128691 58.647 133 50 2 27 156 19 149 1.71e-48 155
Msa1299140 MtrunA17_Chr3g0124861 50.667 150 54 3 25 156 21 168 4.54e-44 147
Msa1299140 MtrunA17_Chr4g0021731 55.682 88 39 0 16 103 1 88 3.51e-25 94.4
Msa1299140 MtrunA17_Chr3g0123131 31.690 142 81 5 20 161 14 139 8.76e-15 72.4
Msa1299140 MtrunA17_Chr7g0275891 34.351 131 74 3 26 156 9 127 9.86e-15 71.6
Msa1299140 MtrunA17_Chr7g0275401 33.588 131 74 3 26 156 9 126 5.17e-14 69.3
Msa1299140 MtrunA17_Chr8g0345901 29.545 132 83 2 28 159 38 159 7.74e-14 69.7
Msa1299140 MtrunA17_Chr8g0376881 30.070 143 84 4 20 162 26 152 1.82e-13 68.6
Msa1299140 MtrunA17_Chr1g0149851 32.061 131 76 2 26 156 9 126 4.80e-13 67.4
Msa1299140 MtrunA17_Chr3g0127941 29.771 131 82 2 26 156 56 176 7.01e-13 67.0
Msa1299140 MtrunA17_Chr1g0149841 31.298 131 77 2 26 156 9 126 1.05e-12 66.2
Msa1299140 MtrunA17_Chr7g0276361 26.415 159 107 3 26 184 14 162 7.30e-12 63.9
Msa1299140 MtrunA17_Chr4g0030271 30.534 131 81 2 26 156 89 209 1.12e-11 63.5
Msa1299140 MtrunA17_Chr1g0181811 29.771 131 82 3 26 156 85 205 6.63e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299140 AT3G48100.1 65.922 179 57 3 5 180 2 179 1.94e-75 226
Msa1299140 AT5G62920.1 73.203 153 40 1 26 178 25 176 5.79e-72 217
Msa1299140 AT1G74890.1 72.483 149 37 3 25 170 17 164 6.17e-68 207
Msa1299140 AT1G59940.1 58.000 200 73 4 16 206 23 220 5.27e-67 206
Msa1299140 AT1G19050.1 63.158 171 46 4 3 167 2 161 2.84e-66 203
Msa1299140 AT1G10470.3 72.340 141 38 1 16 156 10 149 1.02e-65 203
Msa1299140 AT1G59940.2 58.000 200 73 4 16 206 115 312 1.45e-65 205
Msa1299140 AT1G10470.1 72.340 141 38 1 16 156 24 163 2.50e-65 202
Msa1299140 AT2G40670.2 62.222 135 48 1 25 156 28 162 2.19e-55 174
Msa1299140 AT3G56380.2 62.406 133 49 1 25 156 19 151 8.12e-55 172
Msa1299140 AT3G57040.2 58.940 151 51 3 21 161 4 153 1.65e-53 171
Msa1299140 AT3G57040.1 58.940 151 51 3 21 161 4 153 1.65e-53 171
Msa1299140 AT2G41310.1 60.000 145 49 2 24 160 7 150 3.18e-53 171
Msa1299140 AT2G40670.1 61.481 135 48 2 25 156 28 161 1.45e-52 167
Msa1299140 AT3G56380.1 61.654 133 49 2 25 156 19 150 3.44e-52 165
Msa1299140 AT1G10470.2 62.667 75 27 1 94 167 25 99 7.48e-24 94.0
Msa1299140 AT2G07440.1 58.730 63 26 0 98 160 2 64 2.25e-17 75.9
Msa1299140 AT5G07210.2 29.630 162 100 3 25 186 15 162 7.94e-16 75.9
Msa1299140 AT1G67710.1 32.692 156 89 5 16 168 1 143 8.48e-16 75.9
Msa1299140 AT5G24470.1 29.851 134 84 2 26 159 50 173 7.01e-14 70.1
Msa1299140 AT2G25180.1 30.070 143 84 4 14 156 8 134 1.11e-13 69.7
Msa1299140 AT4G31920.1 28.671 143 86 4 14 156 8 134 9.54e-13 67.0
Msa1299140 AT5G60100.7 32.061 131 79 3 26 156 64 184 4.00e-12 65.1
Msa1299140 AT5G60100.6 32.061 131 79 3 26 156 64 184 4.00e-12 65.1
Msa1299140 AT5G60100.4 32.061 131 79 3 26 156 64 184 4.00e-12 65.1
Msa1299140 AT2G46790.3 28.244 131 84 2 26 156 37 157 4.32e-12 64.7
Msa1299140 AT2G46790.1 28.244 131 84 2 26 156 37 157 5.15e-12 64.7
Msa1299140 AT5G60100.2 32.061 131 79 3 26 156 64 184 5.58e-12 64.7
Msa1299140 AT5G60100.5 32.061 131 79 3 26 156 64 184 7.84e-12 64.3
Msa1299140 AT5G60100.3 32.061 131 79 3 26 156 64 184 7.84e-12 64.3
Msa1299140 AT5G60100.1 32.061 131 79 3 26 156 64 184 7.84e-12 64.3
Msa1299140 AT1G49190.1 25.926 189 108 5 10 193 21 182 3.36e-11 62.0
Msa1299140 AT2G27070.1 29.560 159 93 5 25 180 15 157 3.49e-11 62.4
Msa1299140 AT2G01760.1 30.380 158 88 7 17 173 5 141 3.93e-11 62.0
Msa1299140 AT5G02810.1 29.771 131 82 3 26 156 78 198 6.92e-11 61.6

Find 67 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACATTAGTATTGCAAAAT+TGG 0.190761 8_3:-60178846 None:intergenic
CTCTCATGATAAAATCTTTC+AGG 0.209124 8_3:-60178621 None:intergenic
TAATAAATAGTGAAATAAAA+TGG 0.211872 8_3:-60176732 None:intergenic
TTAGGCTCCGTTTGCGAGTT+TGG 0.251599 8_3:+60178964 Msa1299140:three_prime_UTR
TCATAATCTTGATTTCTTAG+AGG 0.316444 8_3:-60178794 None:intergenic
TGGTTAACAAATTCAAAATA+TGG 0.321894 8_3:-60178867 None:intergenic
GTCGAATTTGACGGAGTTGA+TGG 0.327382 8_3:+60176945 Msa1299140:CDS
TTCACTAATTTGCAGGTGTT+TGG 0.354372 8_3:+60178543 Msa1299140:intron
GCGAGTTTGGAGGGGAAGGG+AGG 0.381173 8_3:+60178977 Msa1299140:three_prime_UTR
TTGCAAAATTGGAGAAATAT+AGG 0.385342 8_3:-60178835 None:intergenic
TTCTTAGAGGATAATGTTGA+TGG 0.406515 8_3:-60178781 None:intergenic
AATAAATAGTGAAATAAAAT+GGG 0.412992 8_3:-60176731 None:intergenic
GTTATATTTACATGAGCGTT+AGG 0.414029 8_3:-60176794 None:intergenic
AAGAAAGTAAACTGATTTGT+GGG 0.433428 8_3:-60176694 None:intergenic
GAGTTTGGAGGGGAAGGGAG+GGG 0.442447 8_3:+60178979 Msa1299140:three_prime_UTR
GAAAATGAGAAATGAAAGAG+TGG 0.444549 8_3:-60176819 None:intergenic
CTCAAGATTTAAAATGAGAA+AGG 0.449099 8_3:+60178906 Msa1299140:three_prime_UTR
TTGATGGAGGAATCACCTTC+AGG 0.454395 8_3:+60176961 Msa1299140:CDS
CGAGTTTGGAGGGGAAGGGA+GGG 0.456797 8_3:+60178978 Msa1299140:three_prime_UTR
GGGAAGGGAGGGGAATGCTT+AGG 0.462611 8_3:+60178989 Msa1299140:three_prime_UTR
AAAGAAAGTAAACTGATTTG+TGG 0.465250 8_3:-60176695 None:intergenic
TATTCCATGCCGGGGATGAC+AGG 0.470500 8_3:+60177397 Msa1299140:CDS
CTTACATCTGACAATTTGAC+TGG 0.476820 8_3:-60178595 None:intergenic
TTCCCCTCCAAACTCGCAAA+CGG 0.479292 8_3:-60178971 None:intergenic
GGCTCCGTTTGCGAGTTTGG+AGG 0.493454 8_3:+60178967 Msa1299140:three_prime_UTR
ATGACGGATTATTCCATGCC+GGG 0.493470 8_3:+60177388 Msa1299140:CDS
CAGTTTGCTATGGCTGCCGC+CGG 0.493752 8_3:+60176910 Msa1299140:exon
GCTCCGTTTGCGAGTTTGGA+GGG 0.496097 8_3:+60178968 Msa1299140:three_prime_UTR
ATTCATTGTTCAGTTTGCTA+TGG 0.498719 8_3:+60176900 Msa1299140:exon
GATGGAGAGAACAGTGATGT+TGG 0.500241 8_3:+60177240 Msa1299140:CDS
GAGGAATCACCTTCAGGTGC+AGG 0.503243 8_3:+60176967 Msa1299140:CDS
TTGAAGATTTCTTCATGCAA+AGG 0.508242 8_3:+60177051 Msa1299140:CDS
GTTTGCGAGTTTGGAGGGGA+AGG 0.511162 8_3:+60178973 Msa1299140:three_prime_UTR
GAAGGTTAATTTGATAATGA+CGG 0.519870 8_3:+60177372 Msa1299140:CDS
ACTAATTTGCAGGTGTTTGG+AGG 0.520826 8_3:+60178546 Msa1299140:intron
ATTTGCAGGTGTTTGGAGGA+AGG 0.521653 8_3:+60178550 Msa1299140:intron
TTTGCGAGTTTGGAGGGGAA+GGG 0.531962 8_3:+60178974 Msa1299140:three_prime_UTR
TCAAGATTTAAAATGAGAAA+GGG 0.532499 8_3:+60178907 Msa1299140:three_prime_UTR
TGAATTACTCAAGAAAATCA+AGG 0.543151 8_3:+60177423 Msa1299140:CDS
CTCCGTTTGCGAGTTTGGAG+GGG 0.547600 8_3:+60178969 Msa1299140:three_prime_UTR
TCCGACGACATGATCACCAC+TGG 0.553036 8_3:-60177616 None:intergenic
AATTCATATCCTGTCATCCC+CGG 0.556181 8_3:-60177406 None:intergenic
GTGTTTGGAGGAAGGAGCAG+AGG 0.569038 8_3:+60178558 Msa1299140:CDS
AAAATGAGAAATGAAAGAGT+GGG 0.574293 8_3:-60176818 None:intergenic
CGTTAGGAAAGAGAAAATGA+AGG 0.576825 8_3:-60176778 None:intergenic
ATATCCTGTCATCCCCGGCA+TGG 0.579959 8_3:-60177401 None:intergenic
TGAGTACAAACTGTATAGAC+TGG 0.580274 8_3:-60178887 None:intergenic
GATAATGTTGATGGCGAGAG+TGG 0.585842 8_3:-60178772 None:intergenic
GTTATGGTGGCAGGGTGTGA+AGG 0.590843 8_3:+60177354 Msa1299140:intron
TCCAGTGGTGATCATGTCGT+CGG 0.591527 8_3:+60177615 Msa1299140:CDS
TCAACTCCGTCAAATTCGAC+CGG 0.594767 8_3:-60176942 None:intergenic
TGCAATTCACCTGCACCTGA+AGG 0.595358 8_3:-60176976 None:intergenic
AATGACGGATTATTCCATGC+CGG 0.601249 8_3:+60177387 Msa1299140:CDS
TATCATGAGAGGTGAAGTGA+AGG 0.611120 8_3:+60178633 Msa1299140:CDS
AAATGAGAAATGAAAGAGTG+GGG 0.614893 8_3:-60176817 None:intergenic
ATGAGAGGTGAAGTGAAGGA+TGG 0.617352 8_3:+60178637 Msa1299140:CDS
GGATCACATGAATGACGCAT+TGG 0.617664 8_3:-60178730 None:intergenic
ATTCGACCGGAAAATCTCGC+CGG 0.617787 8_3:-60176929 None:intergenic
GAATTTGACGGAGTTGATGG+AGG 0.621403 8_3:+60176948 Msa1299140:CDS
GAGAATGTAGTTGATAGAGA+TGG 0.621435 8_3:-60178706 None:intergenic
GTTAGGAAAGAGAAAATGAA+GGG 0.630292 8_3:-60176777 None:intergenic
TGACGGATTATTCCATGCCG+GGG 0.653217 8_3:+60177389 Msa1299140:CDS
AGAAAGTAAACTGATTTGTG+GGG 0.664841 8_3:-60176693 None:intergenic
CGACCGGAAAATCTCGCCGG+CGG 0.669618 8_3:-60176926 None:intergenic
AATGAGAAATGAAAGAGTGG+GGG 0.683813 8_3:-60176816 None:intergenic
GGTGAGAACACTGACGATGG+TGG 0.724751 8_3:-60178751 None:intergenic
AGTGGTGAGAACACTGACGA+TGG 0.780723 8_3:-60178754 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATTTTTTATTTTAT+TGG + chr8_3:60178133-60178152 Msa1299140:intron 0.0%
!!! TATTTTATTTTTTATTTTAT+TGG + chr8_3:60178133-60178152 Msa1299140:intron 0.0%
!! AATAAATAGTGAAATAAAAT+GGG - chr8_3:60176734-60176753 None:intergenic 10.0%
!! TAATAAATAGTGAAATAAAA+TGG - chr8_3:60176735-60176754 None:intergenic 10.0%
!!! TTTGTTTCTTTTTATTTTTT+TGG - chr8_3:60178258-60178277 None:intergenic 10.0%
!! AATAAAAAGAAACAAATAAA+AGG + chr8_3:60178262-60178281 Msa1299140:intron 10.0%
!! AATAAATAGTGAAATAAAAT+GGG - chr8_3:60176734-60176753 None:intergenic 10.0%
!! TAATAAATAGTGAAATAAAA+TGG - chr8_3:60176735-60176754 None:intergenic 10.0%
!!! TTTGTTTCTTTTTATTTTTT+TGG - chr8_3:60178258-60178277 None:intergenic 10.0%
!! AATAAAAAGAAACAAATAAA+AGG + chr8_3:60178262-60178281 Msa1299140:intron 10.0%
!!! ATTGATTTTGAAAATGTTTT+TGG + chr8_3:60177151-60177170 Msa1299140:intron 15.0%
!!! ATTTTGAAATTTTATATTGG+AGG + chr8_3:60177523-60177542 Msa1299140:intron 15.0%
!! AAACAAATAAAAGGAATATT+TGG + chr8_3:60178271-60178290 Msa1299140:intron 15.0%
!! ATATGTACATTTGTATTATA+TGG + chr8_3:60178381-60178400 Msa1299140:intron 15.0%
!!! ATTGATTTTGAAAATGTTTT+TGG + chr8_3:60177151-60177170 Msa1299140:intron 15.0%
!!! ATTTTGAAATTTTATATTGG+AGG + chr8_3:60177523-60177542 Msa1299140:intron 15.0%
!! AAACAAATAAAAGGAATATT+TGG + chr8_3:60178271-60178290 Msa1299140:intron 15.0%
!! ATATGTACATTTGTATTATA+TGG + chr8_3:60178381-60178400 Msa1299140:intron 15.0%
!!! TTTGTTTTTTGTTTCAGTTA+CGG + chr8_3:60177176-60177195 Msa1299140:intron 20.0%
!! CAAGGTGATTAATTAATTAT+TGG + chr8_3:60177441-60177460 Msa1299140:intron 20.0%
!! AACTATCAACAATTCAAATA+AGG - chr8_3:60177481-60177500 None:intergenic 20.0%
!!! TTATTTGTTAACACTAAGAA+CGG + chr8_3:60177940-60177959 Msa1299140:intron 20.0%
!!! ACAAATGTACATATTCTTTT+GGG - chr8_3:60178375-60178394 None:intergenic 20.0%
!!! TACAAATGTACATATTCTTT+TGG - chr8_3:60178376-60178395 None:intergenic 20.0%
!! AAATAAAACTATTAAGAAGC+AGG - chr8_3:60178524-60178543 None:intergenic 20.0%
!!! TTTTATTTTCACTAATTTGC+AGG + chr8_3:60178536-60178555 Msa1299140:intron 20.0%
!! TGGTTAACAAATTCAAAATA+TGG - chr8_3:60178870-60178889 None:intergenic 20.0%
!!! TCAAGATTTAAAATGAGAAA+GGG + chr8_3:60178907-60178926 Msa1299140:three_prime_UTR 20.0%
!!! ATAACAGAATCACTATTTTT+TGG + chr8_3:60178937-60178956 Msa1299140:three_prime_UTR 20.0%
!!! TTTGTTTTTTGTTTCAGTTA+CGG + chr8_3:60177176-60177195 Msa1299140:intron 20.0%
!! CAAGGTGATTAATTAATTAT+TGG + chr8_3:60177441-60177460 Msa1299140:intron 20.0%
!! AACTATCAACAATTCAAATA+AGG - chr8_3:60177481-60177500 None:intergenic 20.0%
!!! TTATTTGTTAACACTAAGAA+CGG + chr8_3:60177940-60177959 Msa1299140:intron 20.0%
!!! ACAAATGTACATATTCTTTT+GGG - chr8_3:60178375-60178394 None:intergenic 20.0%
!!! TACAAATGTACATATTCTTT+TGG - chr8_3:60178376-60178395 None:intergenic 20.0%
!! AAATAAAACTATTAAGAAGC+AGG - chr8_3:60178524-60178543 None:intergenic 20.0%
!!! TTTTATTTTCACTAATTTGC+AGG + chr8_3:60178536-60178555 Msa1299140:intron 20.0%
!! TGGTTAACAAATTCAAAATA+TGG - chr8_3:60178870-60178889 None:intergenic 20.0%
!!! TCAAGATTTAAAATGAGAAA+GGG + chr8_3:60178907-60178926 Msa1299140:three_prime_UTR 20.0%
!!! ATAACAGAATCACTATTTTT+TGG + chr8_3:60178937-60178956 Msa1299140:three_prime_UTR 20.0%
! AAAATGAGAAATGAAAGAGT+GGG - chr8_3:60176821-60176840 None:intergenic 25.0%
! ATGTAAGCAAATTATGTTTC+TGG + chr8_3:60177268-60177287 Msa1299140:intron 25.0%
!!! ACTTTGCTTGGATTTTAATT+TGG + chr8_3:60177298-60177317 Msa1299140:intron 25.0%
!!! GTTGTTGTTTTGTTATGTTA+TGG + chr8_3:60177338-60177357 Msa1299140:intron 25.0%
!!! GAAGGTTAATTTGATAATGA+CGG + chr8_3:60177372-60177391 Msa1299140:CDS 25.0%
! TGAATTACTCAAGAAAATCA+AGG + chr8_3:60177423-60177442 Msa1299140:CDS 25.0%
!! TGAAATTTTATATTGGAGGA+AGG + chr8_3:60177527-60177546 Msa1299140:intron 25.0%
! CAGATTAGATGCATATTTAT+GGG - chr8_3:60177806-60177825 None:intergenic 25.0%
! GAATTTATTTCCTGATTAAG+TGG - chr8_3:60177829-60177848 None:intergenic 25.0%
! ACAAATAAACTTAAGTAGCA+TGG - chr8_3:60177928-60177947 None:intergenic 25.0%
!! TGATTCAAGTTAAAAGAGTT+GGG - chr8_3:60178104-60178123 None:intergenic 25.0%
!! ATGTTTTCATACGATTGATA+AGG - chr8_3:60178199-60178218 None:intergenic 25.0%
!! ATATTTGGCAAGAATCTTTT+AGG + chr8_3:60178286-60178305 Msa1299140:intron 25.0%
! TCATAATCTTGATTTCTTAG+AGG - chr8_3:60178797-60178816 None:intergenic 25.0%
! TTGCAAAATTGGAGAAATAT+AGG - chr8_3:60178838-60178857 None:intergenic 25.0%
!! CTCAAGATTTAAAATGAGAA+AGG + chr8_3:60178906-60178925 Msa1299140:three_prime_UTR 25.0%
! AAAATGAGAAATGAAAGAGT+GGG - chr8_3:60176821-60176840 None:intergenic 25.0%
! ATGTAAGCAAATTATGTTTC+TGG + chr8_3:60177268-60177287 Msa1299140:intron 25.0%
!!! ACTTTGCTTGGATTTTAATT+TGG + chr8_3:60177298-60177317 Msa1299140:intron 25.0%
!!! GTTGTTGTTTTGTTATGTTA+TGG + chr8_3:60177338-60177357 Msa1299140:intron 25.0%
!!! GAAGGTTAATTTGATAATGA+CGG + chr8_3:60177372-60177391 Msa1299140:CDS 25.0%
! TGAATTACTCAAGAAAATCA+AGG + chr8_3:60177423-60177442 Msa1299140:CDS 25.0%
!! TGAAATTTTATATTGGAGGA+AGG + chr8_3:60177527-60177546 Msa1299140:intron 25.0%
! CAGATTAGATGCATATTTAT+GGG - chr8_3:60177806-60177825 None:intergenic 25.0%
! GAATTTATTTCCTGATTAAG+TGG - chr8_3:60177829-60177848 None:intergenic 25.0%
! ACAAATAAACTTAAGTAGCA+TGG - chr8_3:60177928-60177947 None:intergenic 25.0%
!! TGATTCAAGTTAAAAGAGTT+GGG - chr8_3:60178104-60178123 None:intergenic 25.0%
!! ATGTTTTCATACGATTGATA+AGG - chr8_3:60178199-60178218 None:intergenic 25.0%
!! ATATTTGGCAAGAATCTTTT+AGG + chr8_3:60178286-60178305 Msa1299140:intron 25.0%
! TCATAATCTTGATTTCTTAG+AGG - chr8_3:60178797-60178816 None:intergenic 25.0%
! TTGCAAAATTGGAGAAATAT+AGG - chr8_3:60178838-60178857 None:intergenic 25.0%
!! CTCAAGATTTAAAATGAGAA+AGG + chr8_3:60178906-60178925 Msa1299140:three_prime_UTR 25.0%
GTTAGGAAAGAGAAAATGAA+GGG - chr8_3:60176780-60176799 None:intergenic 30.0%
GTTATATTTACATGAGCGTT+AGG - chr8_3:60176797-60176816 None:intergenic 30.0%
AAATGAGAAATGAAAGAGTG+GGG - chr8_3:60176820-60176839 None:intergenic 30.0%
GAAAATGAGAAATGAAAGAG+TGG - chr8_3:60176822-60176841 None:intergenic 30.0%
GAAAAGAAACTGAAAAACAC+AGG - chr8_3:60176855-60176874 None:intergenic 30.0%
!! ATTCATTGTTCAGTTTGCTA+TGG + chr8_3:60176900-60176919 Msa1299140:exon 30.0%
TTGAAGATTTCTTCATGCAA+AGG + chr8_3:60177051-60177070 Msa1299140:CDS 30.0%
TCTGGATTATTAACTTTGCT+TGG + chr8_3:60177286-60177305 Msa1299140:intron 30.0%
!! GTTGTTTTGTTATGTTATGG+TGG + chr8_3:60177341-60177360 Msa1299140:intron 30.0%
! AATTTTATATTGGAGGAAGG+TGG + chr8_3:60177530-60177549 Msa1299140:intron 30.0%
!!! ATGTTTTGACTCGAATTGAT+AGG + chr8_3:60177641-60177660 Msa1299140:CDS 30.0%
!! CTTTTGATTCTAGTGTGATT+TGG + chr8_3:60177688-60177707 Msa1299140:intron 30.0%
TGGTGAATAACATGTGTATT+TGG + chr8_3:60177712-60177731 Msa1299140:intron 30.0%
GCAGATTAGATGCATATTTA+TGG - chr8_3:60177807-60177826 None:intergenic 30.0%
TTATGCCTCCATATCTATTT+GGG - chr8_3:60177863-60177882 None:intergenic 30.0%
TGTTTCAAATCACTCAGATA+GGG + chr8_3:60178002-60178021 Msa1299140:intron 30.0%
GAAATCTGGAGAACTTAATT+TGG - chr8_3:60178073-60178092 None:intergenic 30.0%
! CTGATTCAAGTTAAAAGAGT+TGG - chr8_3:60178105-60178124 None:intergenic 30.0%
TTGGAACTCGAATAAGTTTA+TGG + chr8_3:60178152-60178171 Msa1299140:intron 30.0%
!! TATGGTGTTATTTGTTTCCT+TGG + chr8_3:60178170-60178189 Msa1299140:intron 30.0%
ATTACAATTACATCGGTAGA+AGG - chr8_3:60178323-60178342 None:intergenic 30.0%
TGTGGCAATTACAATTACAT+CGG - chr8_3:60178330-60178349 None:intergenic 30.0%
ATGTAATTGTAATTGCCACA+CGG + chr8_3:60178330-60178349 Msa1299140:intron 30.0%
! TGTATTATATGGAGTGCTTT+AGG + chr8_3:60178392-60178411 Msa1299140:intron 30.0%
ACATTAACTTTCTATGCTGT+GGG + chr8_3:60178481-60178500 Msa1299140:intron 30.0%
CTCTCATGATAAAATCTTTC+AGG - chr8_3:60178624-60178643 None:intergenic 30.0%
! CTGAAAGATTTTATCATGAG+AGG + chr8_3:60178622-60178641 Msa1299140:CDS 30.0%
TTCTTAGAGGATAATGTTGA+TGG - chr8_3:60178784-60178803 None:intergenic 30.0%
GGACATTAGTATTGCAAAAT+TGG - chr8_3:60178849-60178868 None:intergenic 30.0%
!!! TCACTATTTTTTGGTCTCTT+AGG + chr8_3:60178946-60178965 Msa1299140:three_prime_UTR 30.0%
GTTAGGAAAGAGAAAATGAA+GGG - chr8_3:60176780-60176799 None:intergenic 30.0%
GTTATATTTACATGAGCGTT+AGG - chr8_3:60176797-60176816 None:intergenic 30.0%
AAATGAGAAATGAAAGAGTG+GGG - chr8_3:60176820-60176839 None:intergenic 30.0%
GAAAATGAGAAATGAAAGAG+TGG - chr8_3:60176822-60176841 None:intergenic 30.0%
GAAAAGAAACTGAAAAACAC+AGG - chr8_3:60176855-60176874 None:intergenic 30.0%
!! ATTCATTGTTCAGTTTGCTA+TGG + chr8_3:60176900-60176919 Msa1299140:exon 30.0%
TTGAAGATTTCTTCATGCAA+AGG + chr8_3:60177051-60177070 Msa1299140:CDS 30.0%
TCTGGATTATTAACTTTGCT+TGG + chr8_3:60177286-60177305 Msa1299140:intron 30.0%
!! GTTGTTTTGTTATGTTATGG+TGG + chr8_3:60177341-60177360 Msa1299140:intron 30.0%
! AATTTTATATTGGAGGAAGG+TGG + chr8_3:60177530-60177549 Msa1299140:intron 30.0%
!!! ATGTTTTGACTCGAATTGAT+AGG + chr8_3:60177641-60177660 Msa1299140:CDS 30.0%
!! CTTTTGATTCTAGTGTGATT+TGG + chr8_3:60177688-60177707 Msa1299140:intron 30.0%
TGGTGAATAACATGTGTATT+TGG + chr8_3:60177712-60177731 Msa1299140:intron 30.0%
GCAGATTAGATGCATATTTA+TGG - chr8_3:60177807-60177826 None:intergenic 30.0%
TTATGCCTCCATATCTATTT+GGG - chr8_3:60177863-60177882 None:intergenic 30.0%
TGTTTCAAATCACTCAGATA+GGG + chr8_3:60178002-60178021 Msa1299140:intron 30.0%
GAAATCTGGAGAACTTAATT+TGG - chr8_3:60178073-60178092 None:intergenic 30.0%
! CTGATTCAAGTTAAAAGAGT+TGG - chr8_3:60178105-60178124 None:intergenic 30.0%
TTGGAACTCGAATAAGTTTA+TGG + chr8_3:60178152-60178171 Msa1299140:intron 30.0%
!! TATGGTGTTATTTGTTTCCT+TGG + chr8_3:60178170-60178189 Msa1299140:intron 30.0%
ATTACAATTACATCGGTAGA+AGG - chr8_3:60178323-60178342 None:intergenic 30.0%
TGTGGCAATTACAATTACAT+CGG - chr8_3:60178330-60178349 None:intergenic 30.0%
ATGTAATTGTAATTGCCACA+CGG + chr8_3:60178330-60178349 Msa1299140:intron 30.0%
! TGTATTATATGGAGTGCTTT+AGG + chr8_3:60178392-60178411 Msa1299140:intron 30.0%
ACATTAACTTTCTATGCTGT+GGG + chr8_3:60178481-60178500 Msa1299140:intron 30.0%
CTCTCATGATAAAATCTTTC+AGG - chr8_3:60178624-60178643 None:intergenic 30.0%
! CTGAAAGATTTTATCATGAG+AGG + chr8_3:60178622-60178641 Msa1299140:CDS 30.0%
TTCTTAGAGGATAATGTTGA+TGG - chr8_3:60178784-60178803 None:intergenic 30.0%
GGACATTAGTATTGCAAAAT+TGG - chr8_3:60178849-60178868 None:intergenic 30.0%
!!! TCACTATTTTTTGGTCTCTT+AGG + chr8_3:60178946-60178965 Msa1299140:three_prime_UTR 30.0%
CGTTAGGAAAGAGAAAATGA+AGG - chr8_3:60176781-60176800 None:intergenic 35.0%
AATGAGAAATGAAAGAGTGG+GGG - chr8_3:60176819-60176838 None:intergenic 35.0%
! AAGAAGAGCTCTTCAGTTTT+TGG + chr8_3:60177212-60177231 Msa1299140:CDS 35.0%
! AGAAGAGCTCTTCAGTTTTT+GGG + chr8_3:60177213-60177232 Msa1299140:CDS 35.0%
!! TTTTGTTATGTTATGGTGGC+AGG + chr8_3:60177345-60177364 Msa1299140:intron 35.0%
! TTTGTTATGTTATGGTGGCA+GGG + chr8_3:60177346-60177365 Msa1299140:intron 35.0%
CTGCTGAAATTAACACAAAC+AGG - chr8_3:60177572-60177591 None:intergenic 35.0%
CTGTTTGTGTTAATTTCAGC+AGG + chr8_3:60177570-60177589 Msa1299140:intron 35.0%
!!! TGTTTTTAGGGAAATTCCAG+TGG + chr8_3:60177600-60177619 Msa1299140:CDS 35.0%
! TGATTCTAGTGTGATTTGGA+TGG + chr8_3:60177692-60177711 Msa1299140:intron 35.0%
GTTCCTACTGAATTCTAATC+TGG + chr8_3:60177764-60177783 Msa1299140:intron 35.0%
ACACCAGATTAGAATTCAGT+AGG - chr8_3:60177770-60177789 None:intergenic 35.0%
! ATCTAATCTGCCACTTAATC+AGG + chr8_3:60177816-60177835 Msa1299140:intron 35.0%
GTGTAGATCCCAAATAGATA+TGG + chr8_3:60177852-60177871 Msa1299140:intron 35.0%
TAGATCCCAAATAGATATGG+AGG + chr8_3:60177855-60177874 Msa1299140:intron 35.0%
CTTATGCCTCCATATCTATT+TGG - chr8_3:60177864-60177883 None:intergenic 35.0%
TTTAACTGTTGAAGCTCCAT+AGG + chr8_3:60177891-60177910 Msa1299140:intron 35.0%
GTGTTTCAAATCACTCAGAT+AGG + chr8_3:60178001-60178020 Msa1299140:intron 35.0%
TTAAAAGAGTTGGGTCTTCA+GGG - chr8_3:60178095-60178114 None:intergenic 35.0%
CAATAATATGTAGAACCGTG+TGG - chr8_3:60178348-60178367 None:intergenic 35.0%
CACATTAACTTTCTATGCTG+TGG + chr8_3:60178480-60178499 Msa1299140:intron 35.0%
AAACTATTAAGAAGCAGGAC+AGG - chr8_3:60178519-60178538 None:intergenic 35.0%
! TTCACTAATTTGCAGGTGTT+TGG + chr8_3:60178543-60178562 Msa1299140:intron 35.0%
CTTACATCTGACAATTTGAC+TGG - chr8_3:60178598-60178617 None:intergenic 35.0%
!! GAGAATGTAGTTGATAGAGA+TGG - chr8_3:60178709-60178728 None:intergenic 35.0%
TGAGTACAAACTGTATAGAC+TGG - chr8_3:60178890-60178909 None:intergenic 35.0%
CGTTAGGAAAGAGAAAATGA+AGG - chr8_3:60176781-60176800 None:intergenic 35.0%
AATGAGAAATGAAAGAGTGG+GGG - chr8_3:60176819-60176838 None:intergenic 35.0%
! AAGAAGAGCTCTTCAGTTTT+TGG + chr8_3:60177212-60177231 Msa1299140:CDS 35.0%
! AGAAGAGCTCTTCAGTTTTT+GGG + chr8_3:60177213-60177232 Msa1299140:CDS 35.0%
!! TTTTGTTATGTTATGGTGGC+AGG + chr8_3:60177345-60177364 Msa1299140:intron 35.0%
! TTTGTTATGTTATGGTGGCA+GGG + chr8_3:60177346-60177365 Msa1299140:intron 35.0%
CTGCTGAAATTAACACAAAC+AGG - chr8_3:60177572-60177591 None:intergenic 35.0%
CTGTTTGTGTTAATTTCAGC+AGG + chr8_3:60177570-60177589 Msa1299140:intron 35.0%
!!! TGTTTTTAGGGAAATTCCAG+TGG + chr8_3:60177600-60177619 Msa1299140:CDS 35.0%
! TGATTCTAGTGTGATTTGGA+TGG + chr8_3:60177692-60177711 Msa1299140:intron 35.0%
GTTCCTACTGAATTCTAATC+TGG + chr8_3:60177764-60177783 Msa1299140:intron 35.0%
ACACCAGATTAGAATTCAGT+AGG - chr8_3:60177770-60177789 None:intergenic 35.0%
! ATCTAATCTGCCACTTAATC+AGG + chr8_3:60177816-60177835 Msa1299140:intron 35.0%
GTGTAGATCCCAAATAGATA+TGG + chr8_3:60177852-60177871 Msa1299140:intron 35.0%
TAGATCCCAAATAGATATGG+AGG + chr8_3:60177855-60177874 Msa1299140:intron 35.0%
CTTATGCCTCCATATCTATT+TGG - chr8_3:60177864-60177883 None:intergenic 35.0%
TTTAACTGTTGAAGCTCCAT+AGG + chr8_3:60177891-60177910 Msa1299140:intron 35.0%
GTGTTTCAAATCACTCAGAT+AGG + chr8_3:60178001-60178020 Msa1299140:intron 35.0%
TTAAAAGAGTTGGGTCTTCA+GGG - chr8_3:60178095-60178114 None:intergenic 35.0%
CAATAATATGTAGAACCGTG+TGG - chr8_3:60178348-60178367 None:intergenic 35.0%
CACATTAACTTTCTATGCTG+TGG + chr8_3:60178480-60178499 Msa1299140:intron 35.0%
AAACTATTAAGAAGCAGGAC+AGG - chr8_3:60178519-60178538 None:intergenic 35.0%
! TTCACTAATTTGCAGGTGTT+TGG + chr8_3:60178543-60178562 Msa1299140:intron 35.0%
CTTACATCTGACAATTTGAC+TGG - chr8_3:60178598-60178617 None:intergenic 35.0%
!! GAGAATGTAGTTGATAGAGA+TGG - chr8_3:60178709-60178728 None:intergenic 35.0%
TGAGTACAAACTGTATAGAC+TGG - chr8_3:60178890-60178909 None:intergenic 35.0%
! GATTTTCCGGTCGAATTTGA+CGG + chr8_3:60176936-60176955 Msa1299140:CDS 40.0%
!!! AGCTCTTCAGTTTTTGGGAT+TGG + chr8_3:60177218-60177237 Msa1299140:CDS 40.0%
!!! CTTCAGTTTTTGGGATTGGA+TGG + chr8_3:60177222-60177241 Msa1299140:CDS 40.0%
!! AATGACGGATTATTCCATGC+CGG + chr8_3:60177387-60177406 Msa1299140:CDS 40.0%
AATTCATATCCTGTCATCCC+CGG - chr8_3:60177409-60177428 None:intergenic 40.0%
!! AGCAGGAGTCTTCTGTTTTT+AGG + chr8_3:60177587-60177606 Msa1299140:intron 40.0%
!!! GCAGGAGTCTTCTGTTTTTA+GGG + chr8_3:60177588-60177607 Msa1299140:intron 40.0%
TGAAGTGATTGTAGAGATGC+AGG + chr8_3:60177964-60177983 Msa1299140:intron 40.0%
GTTAAAAGAGTTGGGTCTTC+AGG - chr8_3:60178096-60178115 None:intergenic 40.0%
TACGATTGATAAGGTTGCCA+AGG - chr8_3:60178190-60178209 None:intergenic 40.0%
TGTCGAAAGTTGTTCTTGCT+AGG - chr8_3:60178462-60178481 None:intergenic 40.0%
TTAACTTTCTATGCTGTGGG+TGG + chr8_3:60178484-60178503 Msa1299140:intron 40.0%
! ACTAATTTGCAGGTGTTTGG+AGG + chr8_3:60178546-60178565 Msa1299140:intron 40.0%
TATCATGAGAGGTGAAGTGA+AGG + chr8_3:60178633-60178652 Msa1299140:CDS 40.0%
AGGGGAATGCTTAGGAAAAA+AGG + chr8_3:60178997-60179016 Msa1299140:three_prime_UTR 40.0%
GGAAAAAAGGAATGAGCAAG+TGG + chr8_3:60179010-60179029 Msa1299140:three_prime_UTR 40.0%
! GATTTTCCGGTCGAATTTGA+CGG + chr8_3:60176936-60176955 Msa1299140:CDS 40.0%
!!! AGCTCTTCAGTTTTTGGGAT+TGG + chr8_3:60177218-60177237 Msa1299140:CDS 40.0%
!!! CTTCAGTTTTTGGGATTGGA+TGG + chr8_3:60177222-60177241 Msa1299140:CDS 40.0%
!! AATGACGGATTATTCCATGC+CGG + chr8_3:60177387-60177406 Msa1299140:CDS 40.0%
AATTCATATCCTGTCATCCC+CGG - chr8_3:60177409-60177428 None:intergenic 40.0%
!! AGCAGGAGTCTTCTGTTTTT+AGG + chr8_3:60177587-60177606 Msa1299140:intron 40.0%
!!! GCAGGAGTCTTCTGTTTTTA+GGG + chr8_3:60177588-60177607 Msa1299140:intron 40.0%
TGAAGTGATTGTAGAGATGC+AGG + chr8_3:60177964-60177983 Msa1299140:intron 40.0%
GTTAAAAGAGTTGGGTCTTC+AGG - chr8_3:60178096-60178115 None:intergenic 40.0%
TACGATTGATAAGGTTGCCA+AGG - chr8_3:60178190-60178209 None:intergenic 40.0%
TGTCGAAAGTTGTTCTTGCT+AGG - chr8_3:60178462-60178481 None:intergenic 40.0%
TTAACTTTCTATGCTGTGGG+TGG + chr8_3:60178484-60178503 Msa1299140:intron 40.0%
! ACTAATTTGCAGGTGTTTGG+AGG + chr8_3:60178546-60178565 Msa1299140:intron 40.0%
TATCATGAGAGGTGAAGTGA+AGG + chr8_3:60178633-60178652 Msa1299140:CDS 40.0%
AGGGGAATGCTTAGGAAAAA+AGG + chr8_3:60178997-60179016 Msa1299140:three_prime_UTR 40.0%
GGAAAAAAGGAATGAGCAAG+TGG + chr8_3:60179010-60179029 Msa1299140:three_prime_UTR 40.0%
TCAACTCCGTCAAATTCGAC+CGG - chr8_3:60176945-60176964 None:intergenic 45.0%
GTCGAATTTGACGGAGTTGA+TGG + chr8_3:60176945-60176964 Msa1299140:CDS 45.0%
!! GAATTTGACGGAGTTGATGG+AGG + chr8_3:60176948-60176967 Msa1299140:CDS 45.0%
TTGATGGAGGAATCACCTTC+AGG + chr8_3:60176961-60176980 Msa1299140:CDS 45.0%
GATGGAGAGAACAGTGATGT+TGG + chr8_3:60177240-60177259 Msa1299140:CDS 45.0%
!! ATGACGGATTATTCCATGCC+GGG + chr8_3:60177388-60177407 Msa1299140:CDS 45.0%
CATGGCAAACACAGATCCTA+TGG - chr8_3:60177910-60177929 None:intergenic 45.0%
! TGGCAAGAATCTTTTAGGCC+TGG + chr8_3:60178291-60178310 Msa1299140:intron 45.0%
AGAAGCAGGACAGGATATAC+TGG - chr8_3:60178510-60178529 None:intergenic 45.0%
ATTTGCAGGTGTTTGGAGGA+AGG + chr8_3:60178550-60178569 Msa1299140:intron 45.0%
ATGAGAGGTGAAGTGAAGGA+TGG + chr8_3:60178637-60178656 Msa1299140:CDS 45.0%
GGATCACATGAATGACGCAT+TGG - chr8_3:60178733-60178752 None:intergenic 45.0%
!! GATAATGTTGATGGCGAGAG+TGG - chr8_3:60178775-60178794 None:intergenic 45.0%
TCAACTCCGTCAAATTCGAC+CGG - chr8_3:60176945-60176964 None:intergenic 45.0%
GTCGAATTTGACGGAGTTGA+TGG + chr8_3:60176945-60176964 Msa1299140:CDS 45.0%
!! GAATTTGACGGAGTTGATGG+AGG + chr8_3:60176948-60176967 Msa1299140:CDS 45.0%
TTGATGGAGGAATCACCTTC+AGG + chr8_3:60176961-60176980 Msa1299140:CDS 45.0%
GATGGAGAGAACAGTGATGT+TGG + chr8_3:60177240-60177259 Msa1299140:CDS 45.0%
!! ATGACGGATTATTCCATGCC+GGG + chr8_3:60177388-60177407 Msa1299140:CDS 45.0%
CATGGCAAACACAGATCCTA+TGG - chr8_3:60177910-60177929 None:intergenic 45.0%
! TGGCAAGAATCTTTTAGGCC+TGG + chr8_3:60178291-60178310 Msa1299140:intron 45.0%
AGAAGCAGGACAGGATATAC+TGG - chr8_3:60178510-60178529 None:intergenic 45.0%
ATTTGCAGGTGTTTGGAGGA+AGG + chr8_3:60178550-60178569 Msa1299140:intron 45.0%
ATGAGAGGTGAAGTGAAGGA+TGG + chr8_3:60178637-60178656 Msa1299140:CDS 45.0%
GGATCACATGAATGACGCAT+TGG - chr8_3:60178733-60178752 None:intergenic 45.0%
!! GATAATGTTGATGGCGAGAG+TGG - chr8_3:60178775-60178794 None:intergenic 45.0%
!!! TTTATTTTGAAATTTTATAT+TGG + chr8_3:60177520-60177539 Msa1299140:intron 5.0%
!!! TTTATTTTGAAATTTTATAT+TGG + chr8_3:60177520-60177539 Msa1299140:intron 5.0%
ATTCGACCGGAAAATCTCGC+CGG - chr8_3:60176932-60176951 None:intergenic 50.0%
TGCAATTCACCTGCACCTGA+AGG - chr8_3:60176979-60176998 None:intergenic 50.0%
!! TGACGGATTATTCCATGCCG+GGG + chr8_3:60177389-60177408 Msa1299140:CDS 50.0%
TCCAGTGGTGATCATGTCGT+CGG + chr8_3:60177615-60177634 Msa1299140:CDS 50.0%
GTTGGGTCTTCAGGGAAATC+TGG - chr8_3:60178087-60178106 None:intergenic 50.0%
AGTGGTGAGAACACTGACGA+TGG - chr8_3:60178757-60178776 None:intergenic 50.0%
TTAGGCTCCGTTTGCGAGTT+TGG + chr8_3:60178964-60178983 Msa1299140:three_prime_UTR 50.0%
TTCCCCTCCAAACTCGCAAA+CGG - chr8_3:60178974-60178993 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr8_3:60178974-60178993 Msa1299140:three_prime_UTR 50.0%
ATTCGACCGGAAAATCTCGC+CGG - chr8_3:60176932-60176951 None:intergenic 50.0%
TGCAATTCACCTGCACCTGA+AGG - chr8_3:60176979-60176998 None:intergenic 50.0%
!! TGACGGATTATTCCATGCCG+GGG + chr8_3:60177389-60177408 Msa1299140:CDS 50.0%
TCCAGTGGTGATCATGTCGT+CGG + chr8_3:60177615-60177634 Msa1299140:CDS 50.0%
GTTGGGTCTTCAGGGAAATC+TGG - chr8_3:60178087-60178106 None:intergenic 50.0%
AGTGGTGAGAACACTGACGA+TGG - chr8_3:60178757-60178776 None:intergenic 50.0%
TTAGGCTCCGTTTGCGAGTT+TGG + chr8_3:60178964-60178983 Msa1299140:three_prime_UTR 50.0%
TTCCCCTCCAAACTCGCAAA+CGG - chr8_3:60178974-60178993 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr8_3:60178974-60178993 Msa1299140:three_prime_UTR 50.0%
GAGGAATCACCTTCAGGTGC+AGG + chr8_3:60176967-60176986 Msa1299140:CDS 55.0%
GTTATGGTGGCAGGGTGTGA+AGG + chr8_3:60177354-60177373 Msa1299140:intron 55.0%
TATTCCATGCCGGGGATGAC+AGG + chr8_3:60177397-60177416 Msa1299140:CDS 55.0%
ATATCCTGTCATCCCCGGCA+TGG - chr8_3:60177404-60177423 None:intergenic 55.0%
TCCGACGACATGATCACCAC+TGG - chr8_3:60177619-60177638 None:intergenic 55.0%
ATCGGTAGAAGGTTGCTGCC+AGG - chr8_3:60178312-60178331 None:intergenic 55.0%
GTGTTTGGAGGAAGGAGCAG+AGG + chr8_3:60178558-60178577 Msa1299140:CDS 55.0%
GGTGAGAACACTGACGATGG+TGG - chr8_3:60178754-60178773 None:intergenic 55.0%
GCTCCGTTTGCGAGTTTGGA+GGG + chr8_3:60178968-60178987 Msa1299140:three_prime_UTR 55.0%
CTCCGTTTGCGAGTTTGGAG+GGG + chr8_3:60178969-60178988 Msa1299140:three_prime_UTR 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr8_3:60178973-60178992 Msa1299140:three_prime_UTR 55.0%
GAGGAATCACCTTCAGGTGC+AGG + chr8_3:60176967-60176986 Msa1299140:CDS 55.0%
GTTATGGTGGCAGGGTGTGA+AGG + chr8_3:60177354-60177373 Msa1299140:intron 55.0%
TATTCCATGCCGGGGATGAC+AGG + chr8_3:60177397-60177416 Msa1299140:CDS 55.0%
ATATCCTGTCATCCCCGGCA+TGG - chr8_3:60177404-60177423 None:intergenic 55.0%
TCCGACGACATGATCACCAC+TGG - chr8_3:60177619-60177638 None:intergenic 55.0%
ATCGGTAGAAGGTTGCTGCC+AGG - chr8_3:60178312-60178331 None:intergenic 55.0%
GTGTTTGGAGGAAGGAGCAG+AGG + chr8_3:60178558-60178577 Msa1299140:CDS 55.0%
GGTGAGAACACTGACGATGG+TGG - chr8_3:60178754-60178773 None:intergenic 55.0%
GCTCCGTTTGCGAGTTTGGA+GGG + chr8_3:60178968-60178987 Msa1299140:three_prime_UTR 55.0%
CTCCGTTTGCGAGTTTGGAG+GGG + chr8_3:60178969-60178988 Msa1299140:three_prime_UTR 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr8_3:60178973-60178992 Msa1299140:three_prime_UTR 55.0%
!! CAGTTTGCTATGGCTGCCGC+CGG + chr8_3:60176910-60176929 Msa1299140:exon 60.0%
GGCTCCGTTTGCGAGTTTGG+AGG + chr8_3:60178967-60178986 Msa1299140:three_prime_UTR 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr8_3:60178978-60178997 Msa1299140:three_prime_UTR 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr8_3:60178979-60178998 Msa1299140:three_prime_UTR 60.0%
GGGAAGGGAGGGGAATGCTT+AGG + chr8_3:60178989-60179008 Msa1299140:three_prime_UTR 60.0%
!! CAGTTTGCTATGGCTGCCGC+CGG + chr8_3:60176910-60176929 Msa1299140:exon 60.0%
GGCTCCGTTTGCGAGTTTGG+AGG + chr8_3:60178967-60178986 Msa1299140:three_prime_UTR 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr8_3:60178978-60178997 Msa1299140:three_prime_UTR 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr8_3:60178979-60178998 Msa1299140:three_prime_UTR 60.0%
GGGAAGGGAGGGGAATGCTT+AGG + chr8_3:60178989-60179008 Msa1299140:three_prime_UTR 60.0%
! CTGCCGCCGGCGAGATTTTC+CGG + chr8_3:60176923-60176942 Msa1299140:CDS 65.0%
CGACCGGAAAATCTCGCCGG+CGG - chr8_3:60176929-60176948 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG + chr8_3:60178977-60178996 Msa1299140:three_prime_UTR 65.0%
! CTGCCGCCGGCGAGATTTTC+CGG + chr8_3:60176923-60176942 Msa1299140:CDS 65.0%
CGACCGGAAAATCTCGCCGG+CGG - chr8_3:60176929-60176948 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG + chr8_3:60178977-60178996 Msa1299140:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 60176696 60179042 60176696 ID=Msa1299140;Name=Msa1299140
chr8_3 mRNA 60176696 60179042 60176696 ID=Msa1299140-mRNA-1;Parent=Msa1299140;Name=Msa1299140-mRNA-1;_AED=0.13;_eAED=0.13;_QI=223|0.75|0.8|1|1|1|5|226|213
chr8_3 exon 60176696 60177072 60176696 ID=Msa1299140-mRNA-1:exon:17474;Parent=Msa1299140-mRNA-1
chr8_3 exon 60177193 60177269 60177193 ID=Msa1299140-mRNA-1:exon:17475;Parent=Msa1299140-mRNA-1
chr8_3 exon 60177367 60177444 60177367 ID=Msa1299140-mRNA-1:exon:17476;Parent=Msa1299140-mRNA-1
chr8_3 exon 60177589 60177662 60177589 ID=Msa1299140-mRNA-1:exon:17477;Parent=Msa1299140-mRNA-1
chr8_3 exon 60178558 60179042 60178558 ID=Msa1299140-mRNA-1:exon:17478;Parent=Msa1299140-mRNA-1
chr8_3 five_prime_UTR 60176696 60176918 60176696 ID=Msa1299140-mRNA-1:five_prime_utr;Parent=Msa1299140-mRNA-1
chr8_3 CDS 60176919 60177072 60176919 ID=Msa1299140-mRNA-1:cds;Parent=Msa1299140-mRNA-1
chr8_3 CDS 60177193 60177269 60177193 ID=Msa1299140-mRNA-1:cds;Parent=Msa1299140-mRNA-1
chr8_3 CDS 60177367 60177444 60177367 ID=Msa1299140-mRNA-1:cds;Parent=Msa1299140-mRNA-1
chr8_3 CDS 60177589 60177662 60177589 ID=Msa1299140-mRNA-1:cds;Parent=Msa1299140-mRNA-1
chr8_3 CDS 60178558 60178816 60178558 ID=Msa1299140-mRNA-1:cds;Parent=Msa1299140-mRNA-1
chr8_3 three_prime_UTR 60178817 60179042 60178817 ID=Msa1299140-mRNA-1:three_prime_utr;Parent=Msa1299140-mRNA-1
Gene Sequence

>Msa1299140

ATGGCTGCCGCCGGCGAGATTTTCCGGTCGAATTTGACGGAGTTGATGGAGGAATCACCTTCAGGTGCAGGTGAATTGCATGTGCTTGCTGTTGATGATAGTCTTGTTGATCGTAAAGTGATTGAACGTTTGTTGAAGATTTCTTCATGCAAAGTTACGGTTGTTGAGAGTGCAAGAAGAGCTCTTCAGTTTTTGGGATTGGATGGAGAGAACAGTGATGTTGGATTTGATGGTGTGAAGGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATATGAATTACTCAAGAAAATCAAGCAGGAGTCTTCTGTTTTTAGGGAAATTCCAGTGGTGATCATGTCGTCGGAAAATGTTTTGACTCGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGATTTTTTGTTGAAGCCAGTCAAATTGTCAGATGTAAGACGCCTGAAAGATTTTATCATGAGAGGTGAAGTGAAGGATGGTGAGAAATGTTCTCTCAAAAGAATGCGATCATCAGATGATTGTAGTCCATCTCTATCAACTACATTCTCACCAATGCGTCATTCATGTGATCCACCATCGTCAGTGTTCTCACCACTCTCGCCATCAACATTATCCTCTAAGAAATCAAGATTATGA
Protein sequence

>Msa1299140

MAAAGEIFRSNLTELMEESPSGAGELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVGFDGVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKDGEKCSLKRMRSSDDCSPSLSTTFSPMRHSCDPPSSVFSPLSPSTLSSKKSRL*