Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334870 | XP_003608937.2 | 97.674 | 215 | 3 | 1 | 1 | 213 | 1 | 215 | 3.12e-145 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334870 | sp|Q9SB04|ARR5_ARATH | 65.922 | 179 | 57 | 3 | 5 | 180 | 2 | 179 | 1.91e-74 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334870 | G7JNT1 | 97.674 | 215 | 3 | 1 | 1 | 213 | 1 | 215 | 1.49e-145 | 413 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1334870 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1299140 | Msa1334870 | 0.868229 | 7.623518e-66 | -8.615850e-47 |
| Msa1210990 | Msa1334870 | 0.971577 | 2.208869e-133 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334870 | MtrunA17_Chr4g0059571 | 97.209 | 215 | 3 | 2 | 1 | 213 | 1 | 214 | 2.21e-146 | 406 |
| Msa1334870 | MtrunA17_Chr3g0118211 | 71.028 | 214 | 47 | 6 | 1 | 213 | 1 | 200 | 4.19e-95 | 276 |
| Msa1334870 | MtrunA17_Chr5g0414931 | 71.528 | 144 | 36 | 2 | 25 | 164 | 15 | 157 | 4.01e-63 | 196 |
| Msa1334870 | MtrunA17_Chr1g0170741 | 69.718 | 142 | 39 | 2 | 21 | 159 | 3 | 143 | 8.48e-62 | 191 |
| Msa1334870 | MtrunA17_Chr7g0256551 | 55.215 | 163 | 63 | 3 | 21 | 174 | 4 | 165 | 8.62e-55 | 174 |
| Msa1334870 | MtrunA17_Chr8g0352871 | 55.090 | 167 | 64 | 3 | 21 | 178 | 4 | 168 | 3.21e-53 | 168 |
| Msa1334870 | MtrunA17_Chr3g0082861 | 52.381 | 168 | 62 | 3 | 24 | 178 | 2 | 164 | 9.41e-50 | 159 |
| Msa1334870 | MtrunA17_Chr3g0128691 | 58.647 | 133 | 50 | 2 | 27 | 156 | 19 | 149 | 1.71e-48 | 155 |
| Msa1334870 | MtrunA17_Chr3g0124861 | 50.667 | 150 | 54 | 3 | 25 | 156 | 21 | 168 | 4.54e-44 | 147 |
| Msa1334870 | MtrunA17_Chr4g0021731 | 55.682 | 88 | 39 | 0 | 16 | 103 | 1 | 88 | 3.51e-25 | 94.4 |
| Msa1334870 | MtrunA17_Chr3g0123131 | 31.690 | 142 | 81 | 5 | 20 | 161 | 14 | 139 | 8.76e-15 | 72.4 |
| Msa1334870 | MtrunA17_Chr7g0275891 | 34.351 | 131 | 74 | 3 | 26 | 156 | 9 | 127 | 9.86e-15 | 71.6 |
| Msa1334870 | MtrunA17_Chr7g0275401 | 33.588 | 131 | 74 | 3 | 26 | 156 | 9 | 126 | 5.17e-14 | 69.3 |
| Msa1334870 | MtrunA17_Chr8g0345901 | 29.545 | 132 | 83 | 2 | 28 | 159 | 38 | 159 | 7.74e-14 | 69.7 |
| Msa1334870 | MtrunA17_Chr8g0376881 | 30.070 | 143 | 84 | 4 | 20 | 162 | 26 | 152 | 1.82e-13 | 68.6 |
| Msa1334870 | MtrunA17_Chr1g0149851 | 32.061 | 131 | 76 | 2 | 26 | 156 | 9 | 126 | 4.80e-13 | 67.4 |
| Msa1334870 | MtrunA17_Chr3g0127941 | 29.771 | 131 | 82 | 2 | 26 | 156 | 56 | 176 | 7.01e-13 | 67.0 |
| Msa1334870 | MtrunA17_Chr1g0149841 | 31.298 | 131 | 77 | 2 | 26 | 156 | 9 | 126 | 1.05e-12 | 66.2 |
| Msa1334870 | MtrunA17_Chr7g0276361 | 26.415 | 159 | 107 | 3 | 26 | 184 | 14 | 162 | 7.30e-12 | 63.9 |
| Msa1334870 | MtrunA17_Chr4g0030271 | 30.534 | 131 | 81 | 2 | 26 | 156 | 89 | 209 | 1.12e-11 | 63.5 |
| Msa1334870 | MtrunA17_Chr1g0181811 | 29.771 | 131 | 82 | 3 | 26 | 156 | 85 | 205 | 6.63e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334870 | AT3G48100.1 | 65.922 | 179 | 57 | 3 | 5 | 180 | 2 | 179 | 1.94e-75 | 226 |
| Msa1334870 | AT5G62920.1 | 73.203 | 153 | 40 | 1 | 26 | 178 | 25 | 176 | 5.79e-72 | 217 |
| Msa1334870 | AT1G74890.1 | 72.483 | 149 | 37 | 3 | 25 | 170 | 17 | 164 | 6.17e-68 | 207 |
| Msa1334870 | AT1G59940.1 | 58.000 | 200 | 73 | 4 | 16 | 206 | 23 | 220 | 5.27e-67 | 206 |
| Msa1334870 | AT1G19050.1 | 63.158 | 171 | 46 | 4 | 3 | 167 | 2 | 161 | 2.84e-66 | 203 |
| Msa1334870 | AT1G10470.3 | 72.340 | 141 | 38 | 1 | 16 | 156 | 10 | 149 | 1.02e-65 | 203 |
| Msa1334870 | AT1G59940.2 | 58.000 | 200 | 73 | 4 | 16 | 206 | 115 | 312 | 1.45e-65 | 205 |
| Msa1334870 | AT1G10470.1 | 72.340 | 141 | 38 | 1 | 16 | 156 | 24 | 163 | 2.50e-65 | 202 |
| Msa1334870 | AT2G40670.2 | 62.222 | 135 | 48 | 1 | 25 | 156 | 28 | 162 | 2.19e-55 | 174 |
| Msa1334870 | AT3G56380.2 | 62.406 | 133 | 49 | 1 | 25 | 156 | 19 | 151 | 8.12e-55 | 172 |
| Msa1334870 | AT3G57040.2 | 58.940 | 151 | 51 | 3 | 21 | 161 | 4 | 153 | 1.65e-53 | 171 |
| Msa1334870 | AT3G57040.1 | 58.940 | 151 | 51 | 3 | 21 | 161 | 4 | 153 | 1.65e-53 | 171 |
| Msa1334870 | AT2G41310.1 | 60.000 | 145 | 49 | 2 | 24 | 160 | 7 | 150 | 3.18e-53 | 171 |
| Msa1334870 | AT2G40670.1 | 61.481 | 135 | 48 | 2 | 25 | 156 | 28 | 161 | 1.45e-52 | 167 |
| Msa1334870 | AT3G56380.1 | 61.654 | 133 | 49 | 2 | 25 | 156 | 19 | 150 | 3.44e-52 | 165 |
| Msa1334870 | AT1G10470.2 | 62.667 | 75 | 27 | 1 | 94 | 167 | 25 | 99 | 7.48e-24 | 94.0 |
| Msa1334870 | AT2G07440.1 | 58.730 | 63 | 26 | 0 | 98 | 160 | 2 | 64 | 2.25e-17 | 75.9 |
| Msa1334870 | AT5G07210.2 | 29.630 | 162 | 100 | 3 | 25 | 186 | 15 | 162 | 7.94e-16 | 75.9 |
| Msa1334870 | AT1G67710.1 | 32.692 | 156 | 89 | 5 | 16 | 168 | 1 | 143 | 8.48e-16 | 75.9 |
| Msa1334870 | AT5G24470.1 | 29.851 | 134 | 84 | 2 | 26 | 159 | 50 | 173 | 7.01e-14 | 70.1 |
| Msa1334870 | AT2G25180.1 | 30.070 | 143 | 84 | 4 | 14 | 156 | 8 | 134 | 1.11e-13 | 69.7 |
| Msa1334870 | AT4G31920.1 | 28.671 | 143 | 86 | 4 | 14 | 156 | 8 | 134 | 9.54e-13 | 67.0 |
| Msa1334870 | AT5G60100.7 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1334870 | AT5G60100.6 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1334870 | AT5G60100.4 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 4.00e-12 | 65.1 |
| Msa1334870 | AT2G46790.3 | 28.244 | 131 | 84 | 2 | 26 | 156 | 37 | 157 | 4.32e-12 | 64.7 |
| Msa1334870 | AT2G46790.1 | 28.244 | 131 | 84 | 2 | 26 | 156 | 37 | 157 | 5.15e-12 | 64.7 |
| Msa1334870 | AT5G60100.2 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 5.58e-12 | 64.7 |
| Msa1334870 | AT5G60100.5 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1334870 | AT5G60100.3 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1334870 | AT5G60100.1 | 32.061 | 131 | 79 | 3 | 26 | 156 | 64 | 184 | 7.84e-12 | 64.3 |
| Msa1334870 | AT1G49190.1 | 25.926 | 189 | 108 | 5 | 10 | 193 | 21 | 182 | 3.36e-11 | 62.0 |
| Msa1334870 | AT2G27070.1 | 29.560 | 159 | 93 | 5 | 25 | 180 | 15 | 157 | 3.49e-11 | 62.4 |
| Msa1334870 | AT2G01760.1 | 30.380 | 158 | 88 | 7 | 17 | 173 | 5 | 141 | 3.93e-11 | 62.0 |
| Msa1334870 | AT5G02810.1 | 29.771 | 131 | 82 | 3 | 26 | 156 | 78 | 198 | 6.92e-11 | 61.6 |
Find 56 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACATTAGTATTGCAAAAT+TGG | 0.190761 | 8_4:+55660603 | None:intergenic |
| CTCTCATGATAAAATCTTTC+AGG | 0.209124 | 8_4:+55660828 | None:intergenic |
| TAATAAATAGTGAAATAAAA+TGG | 0.211872 | 8_4:+55662701 | None:intergenic |
| TCATAATCTTGATTTCTTAG+AGG | 0.316444 | 8_4:+55660655 | None:intergenic |
| TGGTTAACAAATTCAAAATA+TGG | 0.321894 | 8_4:+55660582 | None:intergenic |
| GTCGAATTTGACGGAGTTGA+TGG | 0.327382 | 8_4:-55662488 | Msa1334870:CDS |
| TTCACTAATTTGCAGGTGTT+TGG | 0.354372 | 8_4:-55660906 | Msa1334870:intron |
| TTGCAAAATTGGAGAAATAT+AGG | 0.385342 | 8_4:+55660614 | None:intergenic |
| TTCTTAGAGGATAATGTTGA+TGG | 0.406515 | 8_4:+55660668 | None:intergenic |
| AATAAATAGTGAAATAAAAT+GGG | 0.412992 | 8_4:+55662702 | None:intergenic |
| GTTATATTTACATGAGCGTT+AGG | 0.414029 | 8_4:+55662639 | None:intergenic |
| AAGAAAGTAAACTGATTTGT+GGG | 0.433428 | 8_4:+55662739 | None:intergenic |
| GAAAATGAGAAATGAAAGAG+TGG | 0.444549 | 8_4:+55662614 | None:intergenic |
| TTGATGGAGGAATCACCTTC+AGG | 0.454395 | 8_4:-55662472 | Msa1334870:CDS |
| TCTAAGATTTAAAATGAGAA+AGG | 0.461855 | 8_4:-55660542 | Msa1334870:three_prime_UTR |
| AAAGAAAGTAAACTGATTTG+TGG | 0.465250 | 8_4:+55662738 | None:intergenic |
| TATTCCATGCCGGGGATGAC+AGG | 0.470500 | 8_4:-55662052 | Msa1334870:CDS |
| CTTACATCTGACAATTTGAC+TGG | 0.476820 | 8_4:+55660854 | None:intergenic |
| CTAAGATTTAAAATGAGAAA+GGG | 0.490694 | 8_4:-55660541 | Msa1334870:three_prime_UTR |
| ATGACGGATTATTCCATGCC+GGG | 0.493470 | 8_4:-55662061 | Msa1334870:CDS |
| CAGTTTGCTATGGCTGCCGC+CGG | 0.493752 | 8_4:-55662523 | Msa1334870:exon |
| ATTCATTGTTCAGTTTGCTA+TGG | 0.498719 | 8_4:-55662533 | Msa1334870:exon |
| GATGGAGAGAACAGTGATGT+TGG | 0.500241 | 8_4:-55662209 | Msa1334870:CDS |
| GAGGAATCACCTTCAGGTGC+AGG | 0.503243 | 8_4:-55662466 | Msa1334870:CDS |
| TTGAAGATTTCTTCATGCAA+AGG | 0.508242 | 8_4:-55662382 | Msa1334870:intron |
| GAAGGTTAATTTGATAATGA+CGG | 0.519870 | 8_4:-55662077 | Msa1334870:CDS |
| ACTAATTTGCAGGTGTTTGG+AGG | 0.520826 | 8_4:-55660903 | Msa1334870:intron |
| ATTTGCAGGTGTTTGGAGGA+AGG | 0.521653 | 8_4:-55660899 | Msa1334870:intron |
| TGAATTACTCAAGAAAATCA+AGG | 0.543151 | 8_4:-55662026 | Msa1334870:intron |
| AATTCATATCCTGTCATCCC+CGG | 0.556181 | 8_4:+55662043 | None:intergenic |
| TCCGACGACATGATCACCAC+TGG | 0.559021 | 8_4:+55661833 | None:intergenic |
| GTGTTTGGAGGAAGGAGCAG+AGG | 0.569038 | 8_4:-55660891 | Msa1334870:CDS |
| AAAATGAGAAATGAAAGAGT+GGG | 0.574293 | 8_4:+55662615 | None:intergenic |
| CGTTAGGAAAGAGAAAATGA+AGG | 0.576825 | 8_4:+55662655 | None:intergenic |
| ATATCCTGTCATCCCCGGCA+TGG | 0.579959 | 8_4:+55662048 | None:intergenic |
| AGAGTACAAACTGTATAGAC+TGG | 0.582714 | 8_4:+55660562 | None:intergenic |
| GATAATGTTGATGGCGAGAG+TGG | 0.585842 | 8_4:+55660677 | None:intergenic |
| GTTATGGTGGCAGGGTGTGA+AGG | 0.590843 | 8_4:-55662095 | Msa1334870:intron |
| TCAACTCCGTCAAATTCGAC+CGG | 0.594767 | 8_4:+55662491 | None:intergenic |
| TCCAGTGGTGATCATGTCGT+CGG | 0.595178 | 8_4:-55661834 | Msa1334870:CDS |
| TGCAATTCACCTGCACCTGA+AGG | 0.595358 | 8_4:+55662457 | None:intergenic |
| AATGACGGATTATTCCATGC+CGG | 0.601249 | 8_4:-55662062 | Msa1334870:CDS |
| TATCATGAGAGGTGAAGTGA+AGG | 0.611120 | 8_4:-55660816 | Msa1334870:CDS |
| AAATGAGAAATGAAAGAGTG+GGG | 0.614893 | 8_4:+55662616 | None:intergenic |
| ATGAGAGGTGAAGTGAAGGA+TGG | 0.617352 | 8_4:-55660812 | Msa1334870:CDS |
| GGATCACATGAATGACGCAT+TGG | 0.617664 | 8_4:+55660719 | None:intergenic |
| ATTCGACCGGAAAATCTCGC+CGG | 0.617787 | 8_4:+55662504 | None:intergenic |
| GAATTTGACGGAGTTGATGG+AGG | 0.621403 | 8_4:-55662485 | Msa1334870:CDS |
| GAGAATGTAGTTGATAGAGA+TGG | 0.621435 | 8_4:+55660743 | None:intergenic |
| GTTAGGAAAGAGAAAATGAA+GGG | 0.630292 | 8_4:+55662656 | None:intergenic |
| TGACGGATTATTCCATGCCG+GGG | 0.653217 | 8_4:-55662060 | Msa1334870:CDS |
| AGAAAGTAAACTGATTTGTG+GGG | 0.664841 | 8_4:+55662740 | None:intergenic |
| CGACCGGAAAATCTCGCCGG+CGG | 0.669618 | 8_4:+55662507 | None:intergenic |
| AATGAGAAATGAAAGAGTGG+GGG | 0.683813 | 8_4:+55662617 | None:intergenic |
| GGTGAGAACACTGACGATGG+TGG | 0.724751 | 8_4:+55660698 | None:intergenic |
| AGTGGTGAGAACACTGACGA+TGG | 0.780723 | 8_4:+55660695 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAGTGAAATAAAAT+GGG | + | chr8_4:55660521-55660540 | None:intergenic | 10.0% |
| !! | TAATAAATAGTGAAATAAAA+TGG | + | chr8_4:55660522-55660541 | None:intergenic | 10.0% |
| !!! | TTTGTTTCTTTTTATTTTTT+TGG | + | chr8_4:55662029-55662048 | None:intergenic | 10.0% |
| !! | AATAAAAAGAAACAAATAAA+AGG | - | chr8_4:55662033-55662052 | Msa1334870:CDS | 10.0% |
| !! | AATAAATAGTGAAATAAAAT+GGG | + | chr8_4:55660521-55660540 | None:intergenic | 10.0% |
| !! | TAATAAATAGTGAAATAAAA+TGG | + | chr8_4:55660522-55660541 | None:intergenic | 10.0% |
| !!! | TTTGTTTCTTTTTATTTTTT+TGG | + | chr8_4:55662029-55662048 | None:intergenic | 10.0% |
| !! | AATAAAAAGAAACAAATAAA+AGG | - | chr8_4:55662033-55662052 | Msa1334870:CDS | 10.0% |
| !!! | ATTTTGAAATTTTATATTGG+AGG | - | chr8_4:55661294-55661313 | Msa1334870:intron | 15.0% |
| !! | AAACAAATAAAAGGAATATT+TGG | - | chr8_4:55662042-55662061 | Msa1334870:CDS | 15.0% |
| !! | ATATGTACATTTGTATTATA+TGG | - | chr8_4:55662152-55662171 | Msa1334870:intron | 15.0% |
| !!! | ATTTTGAAATTTTATATTGG+AGG | - | chr8_4:55661294-55661313 | Msa1334870:intron | 15.0% |
| !! | AAACAAATAAAAGGAATATT+TGG | - | chr8_4:55662042-55662061 | Msa1334870:CDS | 15.0% |
| !! | ATATGTACATTTGTATTATA+TGG | - | chr8_4:55662152-55662171 | Msa1334870:intron | 15.0% |
| !!! | AATGTTTTTTGTTTCAGTTA+CGG | - | chr8_4:55660947-55660966 | Msa1334870:intron | 20.0% |
| !! | CAAGGTGATTAATTAATTAT+TGG | - | chr8_4:55661212-55661231 | Msa1334870:intron | 20.0% |
| !! | AACTATCAACAATTCAAATA+AGG | + | chr8_4:55661252-55661271 | None:intergenic | 20.0% |
| !!! | TTATTTGTTAACACTAAGAA+CGG | - | chr8_4:55661711-55661730 | Msa1334870:intron | 20.0% |
| !!! | ACAAATGTACATATTCTTTT+GGG | + | chr8_4:55662146-55662165 | None:intergenic | 20.0% |
| !!! | TACAAATGTACATATTCTTT+TGG | + | chr8_4:55662147-55662166 | None:intergenic | 20.0% |
| !! | AAATAAAACTATTAAGAAGC+AGG | + | chr8_4:55662295-55662314 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCACTAATTTGC+AGG | - | chr8_4:55662307-55662326 | Msa1334870:intron | 20.0% |
| !! | TGGTTAACAAATTCAAAATA+TGG | + | chr8_4:55662641-55662660 | None:intergenic | 20.0% |
| !!! | TCTAAGATTTAAAATGAGAA+AGG | - | chr8_4:55662678-55662697 | Msa1334870:five_prime_UTR | 20.0% |
| !!! | CTAAGATTTAAAATGAGAAA+GGG | - | chr8_4:55662679-55662698 | Msa1334870:five_prime_UTR | 20.0% |
| !!! | ATAACAGAATCACTATTTTT+TGG | - | chr8_4:55662709-55662728 | Msa1334870:five_prime_UTR | 20.0% |
| !!! | AATGTTTTTTGTTTCAGTTA+CGG | - | chr8_4:55660947-55660966 | Msa1334870:intron | 20.0% |
| !! | CAAGGTGATTAATTAATTAT+TGG | - | chr8_4:55661212-55661231 | Msa1334870:intron | 20.0% |
| !! | AACTATCAACAATTCAAATA+AGG | + | chr8_4:55661252-55661271 | None:intergenic | 20.0% |
| !!! | TTATTTGTTAACACTAAGAA+CGG | - | chr8_4:55661711-55661730 | Msa1334870:intron | 20.0% |
| !!! | ACAAATGTACATATTCTTTT+GGG | + | chr8_4:55662146-55662165 | None:intergenic | 20.0% |
| !!! | TACAAATGTACATATTCTTT+TGG | + | chr8_4:55662147-55662166 | None:intergenic | 20.0% |
| !! | AAATAAAACTATTAAGAAGC+AGG | + | chr8_4:55662295-55662314 | None:intergenic | 20.0% |
| !!! | TTTTATTTTCACTAATTTGC+AGG | - | chr8_4:55662307-55662326 | Msa1334870:intron | 20.0% |
| !! | TGGTTAACAAATTCAAAATA+TGG | + | chr8_4:55662641-55662660 | None:intergenic | 20.0% |
| !!! | TCTAAGATTTAAAATGAGAA+AGG | - | chr8_4:55662678-55662697 | Msa1334870:five_prime_UTR | 20.0% |
| !!! | CTAAGATTTAAAATGAGAAA+GGG | - | chr8_4:55662679-55662698 | Msa1334870:five_prime_UTR | 20.0% |
| !!! | ATAACAGAATCACTATTTTT+TGG | - | chr8_4:55662709-55662728 | Msa1334870:five_prime_UTR | 20.0% |
| ! | AAAATGAGAAATGAAAGAGT+GGG | + | chr8_4:55660608-55660627 | None:intergenic | 25.0% |
| ! | ATGTAAGCAAATTATGTTTC+TGG | - | chr8_4:55661039-55661058 | Msa1334870:intron | 25.0% |
| ! | TCTGGATTATTAACTTTGTT+TGG | - | chr8_4:55661057-55661076 | Msa1334870:intron | 25.0% |
| !! | ACTTTGTTTGGATGTTAATT+TGG | - | chr8_4:55661069-55661088 | Msa1334870:intron | 25.0% |
| !!! | GTTGTTGTTTTGTTATGTTA+TGG | - | chr8_4:55661109-55661128 | Msa1334870:intron | 25.0% |
| !!! | GAAGGTTAATTTGATAATGA+CGG | - | chr8_4:55661143-55661162 | Msa1334870:intron | 25.0% |
| ! | TGAATTACTCAAGAAAATCA+AGG | - | chr8_4:55661194-55661213 | Msa1334870:intron | 25.0% |
| !! | TGAAATTTTATATTGGAGGA+AGG | - | chr8_4:55661298-55661317 | Msa1334870:intron | 25.0% |
| ! | CAGATTAGATGCATATTTAT+GGG | + | chr8_4:55661577-55661596 | None:intergenic | 25.0% |
| ! | GAATTTATTTCCTGATTAAG+TGG | + | chr8_4:55661600-55661619 | None:intergenic | 25.0% |
| ! | ACAAATAAACTTAAGTAGCA+TGG | + | chr8_4:55661699-55661718 | None:intergenic | 25.0% |
| !! | TGATTCAAGTTAAAAGAGTT+GGG | + | chr8_4:55661875-55661894 | None:intergenic | 25.0% |
| !! | ATGTTTTCATACGATTGATA+AGG | + | chr8_4:55661970-55661989 | None:intergenic | 25.0% |
| !! | ATATTTGGCAAGAATCTTTT+AGG | - | chr8_4:55662057-55662076 | Msa1334870:CDS | 25.0% |
| ! | TCATAATCTTGATTTCTTAG+AGG | + | chr8_4:55662568-55662587 | None:intergenic | 25.0% |
| ! | TTGCAAAATTGGAGAAATAT+AGG | + | chr8_4:55662609-55662628 | None:intergenic | 25.0% |
| !!! | AAAGAAAGTAAACTGATTTG+TGG | + | chr8_4:55660485-55660504 | None:intergenic | 25.0% |
| ! | AAAATGAGAAATGAAAGAGT+GGG | + | chr8_4:55660608-55660627 | None:intergenic | 25.0% |
| ! | ATGTAAGCAAATTATGTTTC+TGG | - | chr8_4:55661039-55661058 | Msa1334870:intron | 25.0% |
| ! | TCTGGATTATTAACTTTGTT+TGG | - | chr8_4:55661057-55661076 | Msa1334870:intron | 25.0% |
| !! | ACTTTGTTTGGATGTTAATT+TGG | - | chr8_4:55661069-55661088 | Msa1334870:intron | 25.0% |
| !!! | GTTGTTGTTTTGTTATGTTA+TGG | - | chr8_4:55661109-55661128 | Msa1334870:intron | 25.0% |
| !!! | GAAGGTTAATTTGATAATGA+CGG | - | chr8_4:55661143-55661162 | Msa1334870:intron | 25.0% |
| ! | TGAATTACTCAAGAAAATCA+AGG | - | chr8_4:55661194-55661213 | Msa1334870:intron | 25.0% |
| !! | TGAAATTTTATATTGGAGGA+AGG | - | chr8_4:55661298-55661317 | Msa1334870:intron | 25.0% |
| ! | CAGATTAGATGCATATTTAT+GGG | + | chr8_4:55661577-55661596 | None:intergenic | 25.0% |
| ! | GAATTTATTTCCTGATTAAG+TGG | + | chr8_4:55661600-55661619 | None:intergenic | 25.0% |
| ! | ACAAATAAACTTAAGTAGCA+TGG | + | chr8_4:55661699-55661718 | None:intergenic | 25.0% |
| !! | TGATTCAAGTTAAAAGAGTT+GGG | + | chr8_4:55661875-55661894 | None:intergenic | 25.0% |
| !! | ATGTTTTCATACGATTGATA+AGG | + | chr8_4:55661970-55661989 | None:intergenic | 25.0% |
| !! | ATATTTGGCAAGAATCTTTT+AGG | - | chr8_4:55662057-55662076 | Msa1334870:CDS | 25.0% |
| ! | TCATAATCTTGATTTCTTAG+AGG | + | chr8_4:55662568-55662587 | None:intergenic | 25.0% |
| ! | TTGCAAAATTGGAGAAATAT+AGG | + | chr8_4:55662609-55662628 | None:intergenic | 25.0% |
| GTTAGGAAAGAGAAAATGAA+GGG | + | chr8_4:55660567-55660586 | None:intergenic | 30.0% | |
| GTTATATTTACATGAGCGTT+AGG | + | chr8_4:55660584-55660603 | None:intergenic | 30.0% | |
| AAATGAGAAATGAAAGAGTG+GGG | + | chr8_4:55660607-55660626 | None:intergenic | 30.0% | |
| GAAAATGAGAAATGAAAGAG+TGG | + | chr8_4:55660609-55660628 | None:intergenic | 30.0% | |
| GAAAAGAAACTGAAAAACAC+AGG | + | chr8_4:55660642-55660661 | None:intergenic | 30.0% | |
| !! | ATTCATTGTTCAGTTTGCTA+TGG | - | chr8_4:55660687-55660706 | Msa1334870:CDS | 30.0% |
| TTGAAGATTTCTTCATGCAA+AGG | - | chr8_4:55660838-55660857 | Msa1334870:CDS | 30.0% | |
| !! | GTTGTTTTGTTATGTTATGG+TGG | - | chr8_4:55661112-55661131 | Msa1334870:intron | 30.0% |
| ! | AATTTTATATTGGAGGAAGG+TGG | - | chr8_4:55661301-55661320 | Msa1334870:intron | 30.0% |
| !!! | ATGTTTTGACTCGAATTGAT+AGG | - | chr8_4:55661412-55661431 | Msa1334870:intron | 30.0% |
| !! | CTTTTGATTCTAGTGTGATT+TGG | - | chr8_4:55661459-55661478 | Msa1334870:intron | 30.0% |
| TGGTGAATAACATGTGTATT+TGG | - | chr8_4:55661483-55661502 | Msa1334870:intron | 30.0% | |
| GCAGATTAGATGCATATTTA+TGG | + | chr8_4:55661578-55661597 | None:intergenic | 30.0% | |
| TTATGCCTCCATATCTATTT+GGG | + | chr8_4:55661634-55661653 | None:intergenic | 30.0% | |
| TGTTTCAAATCACTCAGATA+GGG | - | chr8_4:55661773-55661792 | Msa1334870:intron | 30.0% | |
| GAAATCTGGAGAACTTAATT+TGG | + | chr8_4:55661844-55661863 | None:intergenic | 30.0% | |
| ! | CTGATTCAAGTTAAAAGAGT+TGG | + | chr8_4:55661876-55661895 | None:intergenic | 30.0% |
| TTGGAACTCGAATAAGTTTA+TGG | - | chr8_4:55661923-55661942 | Msa1334870:intron | 30.0% | |
| !! | TATGGTGTTATTTGTTTCCT+TGG | - | chr8_4:55661941-55661960 | Msa1334870:intron | 30.0% |
| ATTACAATTACATCGGTAGA+AGG | + | chr8_4:55662094-55662113 | None:intergenic | 30.0% | |
| TGTGGCAATTACAATTACAT+CGG | + | chr8_4:55662101-55662120 | None:intergenic | 30.0% | |
| ATGTAATTGTAATTGCCACA+CGG | - | chr8_4:55662101-55662120 | Msa1334870:intron | 30.0% | |
| ! | TGTATTATATGGAGTGCTTT+AGG | - | chr8_4:55662163-55662182 | Msa1334870:intron | 30.0% |
| ACATTTACTTTCTATGCTGT+GGG | - | chr8_4:55662252-55662271 | Msa1334870:CDS | 30.0% | |
| CTCTCATGATAAAATCTTTC+AGG | + | chr8_4:55662395-55662414 | None:intergenic | 30.0% | |
| ! | CTGAAAGATTTTATCATGAG+AGG | - | chr8_4:55662393-55662412 | Msa1334870:CDS | 30.0% |
| TTCTTAGAGGATAATGTTGA+TGG | + | chr8_4:55662555-55662574 | None:intergenic | 30.0% | |
| GGACATTAGTATTGCAAAAT+TGG | + | chr8_4:55662620-55662639 | None:intergenic | 30.0% | |
| GTTAGGAAAGAGAAAATGAA+GGG | + | chr8_4:55660567-55660586 | None:intergenic | 30.0% | |
| GTTATATTTACATGAGCGTT+AGG | + | chr8_4:55660584-55660603 | None:intergenic | 30.0% | |
| AAATGAGAAATGAAAGAGTG+GGG | + | chr8_4:55660607-55660626 | None:intergenic | 30.0% | |
| GAAAATGAGAAATGAAAGAG+TGG | + | chr8_4:55660609-55660628 | None:intergenic | 30.0% | |
| GAAAAGAAACTGAAAAACAC+AGG | + | chr8_4:55660642-55660661 | None:intergenic | 30.0% | |
| !! | ATTCATTGTTCAGTTTGCTA+TGG | - | chr8_4:55660687-55660706 | Msa1334870:CDS | 30.0% |
| TTGAAGATTTCTTCATGCAA+AGG | - | chr8_4:55660838-55660857 | Msa1334870:CDS | 30.0% | |
| !! | GTTGTTTTGTTATGTTATGG+TGG | - | chr8_4:55661112-55661131 | Msa1334870:intron | 30.0% |
| ! | AATTTTATATTGGAGGAAGG+TGG | - | chr8_4:55661301-55661320 | Msa1334870:intron | 30.0% |
| !!! | ATGTTTTGACTCGAATTGAT+AGG | - | chr8_4:55661412-55661431 | Msa1334870:intron | 30.0% |
| !! | CTTTTGATTCTAGTGTGATT+TGG | - | chr8_4:55661459-55661478 | Msa1334870:intron | 30.0% |
| TGGTGAATAACATGTGTATT+TGG | - | chr8_4:55661483-55661502 | Msa1334870:intron | 30.0% | |
| GCAGATTAGATGCATATTTA+TGG | + | chr8_4:55661578-55661597 | None:intergenic | 30.0% | |
| TTATGCCTCCATATCTATTT+GGG | + | chr8_4:55661634-55661653 | None:intergenic | 30.0% | |
| TGTTTCAAATCACTCAGATA+GGG | - | chr8_4:55661773-55661792 | Msa1334870:intron | 30.0% | |
| GAAATCTGGAGAACTTAATT+TGG | + | chr8_4:55661844-55661863 | None:intergenic | 30.0% | |
| ! | CTGATTCAAGTTAAAAGAGT+TGG | + | chr8_4:55661876-55661895 | None:intergenic | 30.0% |
| TTGGAACTCGAATAAGTTTA+TGG | - | chr8_4:55661923-55661942 | Msa1334870:intron | 30.0% | |
| !! | TATGGTGTTATTTGTTTCCT+TGG | - | chr8_4:55661941-55661960 | Msa1334870:intron | 30.0% |
| ATTACAATTACATCGGTAGA+AGG | + | chr8_4:55662094-55662113 | None:intergenic | 30.0% | |
| TGTGGCAATTACAATTACAT+CGG | + | chr8_4:55662101-55662120 | None:intergenic | 30.0% | |
| ATGTAATTGTAATTGCCACA+CGG | - | chr8_4:55662101-55662120 | Msa1334870:intron | 30.0% | |
| ! | TGTATTATATGGAGTGCTTT+AGG | - | chr8_4:55662163-55662182 | Msa1334870:intron | 30.0% |
| ACATTTACTTTCTATGCTGT+GGG | - | chr8_4:55662252-55662271 | Msa1334870:CDS | 30.0% | |
| CTCTCATGATAAAATCTTTC+AGG | + | chr8_4:55662395-55662414 | None:intergenic | 30.0% | |
| ! | CTGAAAGATTTTATCATGAG+AGG | - | chr8_4:55662393-55662412 | Msa1334870:CDS | 30.0% |
| TTCTTAGAGGATAATGTTGA+TGG | + | chr8_4:55662555-55662574 | None:intergenic | 30.0% | |
| GGACATTAGTATTGCAAAAT+TGG | + | chr8_4:55662620-55662639 | None:intergenic | 30.0% | |
| CGTTAGGAAAGAGAAAATGA+AGG | + | chr8_4:55660568-55660587 | None:intergenic | 35.0% | |
| AATGAGAAATGAAAGAGTGG+GGG | + | chr8_4:55660606-55660625 | None:intergenic | 35.0% | |
| !! | TTTTGTTATGTTATGGTGGC+AGG | - | chr8_4:55661116-55661135 | Msa1334870:intron | 35.0% |
| ! | TTTGTTATGTTATGGTGGCA+GGG | - | chr8_4:55661117-55661136 | Msa1334870:intron | 35.0% |
| CTGCTGAAATTAACACAAAC+AGG | + | chr8_4:55661343-55661362 | None:intergenic | 35.0% | |
| CTGTTTGTGTTAATTTCAGC+AGG | - | chr8_4:55661341-55661360 | Msa1334870:intron | 35.0% | |
| ! | TGATTCTAGTGTGATTTGGA+TGG | - | chr8_4:55661463-55661482 | Msa1334870:intron | 35.0% |
| GTTCCTACTGAATTCTAATC+TGG | - | chr8_4:55661535-55661554 | Msa1334870:intron | 35.0% | |
| ACACCAGATTAGAATTCAGT+AGG | + | chr8_4:55661541-55661560 | None:intergenic | 35.0% | |
| ! | ATCTAATCTGCCACTTAATC+AGG | - | chr8_4:55661587-55661606 | Msa1334870:intron | 35.0% |
| GTGTAGATCCCAAATAGATA+TGG | - | chr8_4:55661623-55661642 | Msa1334870:intron | 35.0% | |
| TAGATCCCAAATAGATATGG+AGG | - | chr8_4:55661626-55661645 | Msa1334870:intron | 35.0% | |
| CTTATGCCTCCATATCTATT+TGG | + | chr8_4:55661635-55661654 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAGCTCCAT+AGG | - | chr8_4:55661662-55661681 | Msa1334870:intron | 35.0% | |
| GTGTTTCAAATCACTCAGAT+AGG | - | chr8_4:55661772-55661791 | Msa1334870:intron | 35.0% | |
| TTAAAAGAGTTGGGTCTTCA+GGG | + | chr8_4:55661866-55661885 | None:intergenic | 35.0% | |
| CAATAATATGTAGAACCGTG+TGG | + | chr8_4:55662119-55662138 | None:intergenic | 35.0% | |
| CACATTTACTTTCTATGCTG+TGG | - | chr8_4:55662251-55662270 | Msa1334870:CDS | 35.0% | |
| AAACTATTAAGAAGCAGGAC+AGG | + | chr8_4:55662290-55662309 | None:intergenic | 35.0% | |
| ! | TTCACTAATTTGCAGGTGTT+TGG | - | chr8_4:55662314-55662333 | Msa1334870:intron | 35.0% |
| CTTACATCTGACAATTTGAC+TGG | + | chr8_4:55662369-55662388 | None:intergenic | 35.0% | |
| !! | GAGAATGTAGTTGATAGAGA+TGG | + | chr8_4:55662480-55662499 | None:intergenic | 35.0% |
| AGAGTACAAACTGTATAGAC+TGG | + | chr8_4:55662661-55662680 | None:intergenic | 35.0% | |
| CGTTAGGAAAGAGAAAATGA+AGG | + | chr8_4:55660568-55660587 | None:intergenic | 35.0% | |
| AATGAGAAATGAAAGAGTGG+GGG | + | chr8_4:55660606-55660625 | None:intergenic | 35.0% | |
| !! | TTTTGTTATGTTATGGTGGC+AGG | - | chr8_4:55661116-55661135 | Msa1334870:intron | 35.0% |
| ! | TTTGTTATGTTATGGTGGCA+GGG | - | chr8_4:55661117-55661136 | Msa1334870:intron | 35.0% |
| CTGCTGAAATTAACACAAAC+AGG | + | chr8_4:55661343-55661362 | None:intergenic | 35.0% | |
| CTGTTTGTGTTAATTTCAGC+AGG | - | chr8_4:55661341-55661360 | Msa1334870:intron | 35.0% | |
| ! | TGATTCTAGTGTGATTTGGA+TGG | - | chr8_4:55661463-55661482 | Msa1334870:intron | 35.0% |
| GTTCCTACTGAATTCTAATC+TGG | - | chr8_4:55661535-55661554 | Msa1334870:intron | 35.0% | |
| ACACCAGATTAGAATTCAGT+AGG | + | chr8_4:55661541-55661560 | None:intergenic | 35.0% | |
| ! | ATCTAATCTGCCACTTAATC+AGG | - | chr8_4:55661587-55661606 | Msa1334870:intron | 35.0% |
| GTGTAGATCCCAAATAGATA+TGG | - | chr8_4:55661623-55661642 | Msa1334870:intron | 35.0% | |
| TAGATCCCAAATAGATATGG+AGG | - | chr8_4:55661626-55661645 | Msa1334870:intron | 35.0% | |
| CTTATGCCTCCATATCTATT+TGG | + | chr8_4:55661635-55661654 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAGCTCCAT+AGG | - | chr8_4:55661662-55661681 | Msa1334870:intron | 35.0% | |
| GTGTTTCAAATCACTCAGAT+AGG | - | chr8_4:55661772-55661791 | Msa1334870:intron | 35.0% | |
| TTAAAAGAGTTGGGTCTTCA+GGG | + | chr8_4:55661866-55661885 | None:intergenic | 35.0% | |
| CAATAATATGTAGAACCGTG+TGG | + | chr8_4:55662119-55662138 | None:intergenic | 35.0% | |
| CACATTTACTTTCTATGCTG+TGG | - | chr8_4:55662251-55662270 | Msa1334870:CDS | 35.0% | |
| AAACTATTAAGAAGCAGGAC+AGG | + | chr8_4:55662290-55662309 | None:intergenic | 35.0% | |
| ! | TTCACTAATTTGCAGGTGTT+TGG | - | chr8_4:55662314-55662333 | Msa1334870:intron | 35.0% |
| CTTACATCTGACAATTTGAC+TGG | + | chr8_4:55662369-55662388 | None:intergenic | 35.0% | |
| !! | GAGAATGTAGTTGATAGAGA+TGG | + | chr8_4:55662480-55662499 | None:intergenic | 35.0% |
| AGAGTACAAACTGTATAGAC+TGG | + | chr8_4:55662661-55662680 | None:intergenic | 35.0% | |
| ! | GATTTTCCGGTCGAATTTGA+CGG | - | chr8_4:55660723-55660742 | Msa1334870:CDS | 40.0% |
| ! | AAGAAGAGCTCTCCAGTTTT+TGG | - | chr8_4:55660983-55661002 | Msa1334870:intron | 40.0% |
| ! | AGAAGAGCTCTCCAGTTTTT+GGG | - | chr8_4:55660984-55661003 | Msa1334870:intron | 40.0% |
| !! | AATGACGGATTATTCCATGC+CGG | - | chr8_4:55661158-55661177 | Msa1334870:intron | 40.0% |
| AATTCATATCCTGTCATCCC+CGG | + | chr8_4:55661180-55661199 | None:intergenic | 40.0% | |
| !! | AGCAGGAGTCTTCTGTTTTT+AGG | - | chr8_4:55661358-55661377 | Msa1334870:intron | 40.0% |
| !!! | GCAGGAGTCTTCTGTTTTTA+GGG | - | chr8_4:55661359-55661378 | Msa1334870:intron | 40.0% |
| !!! | TGTTTTTAGGGAGATTCCAG+TGG | - | chr8_4:55661371-55661390 | Msa1334870:intron | 40.0% |
| TGAAGTGATTGTAGAGATGC+AGG | - | chr8_4:55661735-55661754 | Msa1334870:intron | 40.0% | |
| GTTAAAAGAGTTGGGTCTTC+AGG | + | chr8_4:55661867-55661886 | None:intergenic | 40.0% | |
| TACGATTGATAAGGTTGCCA+AGG | + | chr8_4:55661961-55661980 | None:intergenic | 40.0% | |
| TGTCGAAAGTTGTTCTTGCT+AGG | + | chr8_4:55662233-55662252 | None:intergenic | 40.0% | |
| TTTACTTTCTATGCTGTGGG+TGG | - | chr8_4:55662255-55662274 | Msa1334870:CDS | 40.0% | |
| ! | ACTAATTTGCAGGTGTTTGG+AGG | - | chr8_4:55662317-55662336 | Msa1334870:intron | 40.0% |
| TATCATGAGAGGTGAAGTGA+AGG | - | chr8_4:55662404-55662423 | Msa1334870:CDS | 40.0% | |
| ! | GATTTTCCGGTCGAATTTGA+CGG | - | chr8_4:55660723-55660742 | Msa1334870:CDS | 40.0% |
| ! | AAGAAGAGCTCTCCAGTTTT+TGG | - | chr8_4:55660983-55661002 | Msa1334870:intron | 40.0% |
| ! | AGAAGAGCTCTCCAGTTTTT+GGG | - | chr8_4:55660984-55661003 | Msa1334870:intron | 40.0% |
| !! | AATGACGGATTATTCCATGC+CGG | - | chr8_4:55661158-55661177 | Msa1334870:intron | 40.0% |
| AATTCATATCCTGTCATCCC+CGG | + | chr8_4:55661180-55661199 | None:intergenic | 40.0% | |
| !! | AGCAGGAGTCTTCTGTTTTT+AGG | - | chr8_4:55661358-55661377 | Msa1334870:intron | 40.0% |
| !!! | GCAGGAGTCTTCTGTTTTTA+GGG | - | chr8_4:55661359-55661378 | Msa1334870:intron | 40.0% |
| !!! | TGTTTTTAGGGAGATTCCAG+TGG | - | chr8_4:55661371-55661390 | Msa1334870:intron | 40.0% |
| TGAAGTGATTGTAGAGATGC+AGG | - | chr8_4:55661735-55661754 | Msa1334870:intron | 40.0% | |
| GTTAAAAGAGTTGGGTCTTC+AGG | + | chr8_4:55661867-55661886 | None:intergenic | 40.0% | |
| TACGATTGATAAGGTTGCCA+AGG | + | chr8_4:55661961-55661980 | None:intergenic | 40.0% | |
| TGTCGAAAGTTGTTCTTGCT+AGG | + | chr8_4:55662233-55662252 | None:intergenic | 40.0% | |
| TTTACTTTCTATGCTGTGGG+TGG | - | chr8_4:55662255-55662274 | Msa1334870:CDS | 40.0% | |
| ! | ACTAATTTGCAGGTGTTTGG+AGG | - | chr8_4:55662317-55662336 | Msa1334870:intron | 40.0% |
| TATCATGAGAGGTGAAGTGA+AGG | - | chr8_4:55662404-55662423 | Msa1334870:CDS | 40.0% | |
| TCAACTCCGTCAAATTCGAC+CGG | + | chr8_4:55660732-55660751 | None:intergenic | 45.0% | |
| GTCGAATTTGACGGAGTTGA+TGG | - | chr8_4:55660732-55660751 | Msa1334870:CDS | 45.0% | |
| !! | GAATTTGACGGAGTTGATGG+AGG | - | chr8_4:55660735-55660754 | Msa1334870:CDS | 45.0% |
| TTGATGGAGGAATCACCTTC+AGG | - | chr8_4:55660748-55660767 | Msa1334870:CDS | 45.0% | |
| !!! | AGCTCTCCAGTTTTTGGGAT+TGG | - | chr8_4:55660989-55661008 | Msa1334870:intron | 45.0% |
| !!! | CTCCAGTTTTTGGGATTGGA+TGG | - | chr8_4:55660993-55661012 | Msa1334870:intron | 45.0% |
| CTCCATCCAATCCCAAAAAC+TGG | + | chr8_4:55660998-55661017 | None:intergenic | 45.0% | |
| GATGGAGAGAACAGTGATGT+TGG | - | chr8_4:55661011-55661030 | Msa1334870:intron | 45.0% | |
| !! | ATGACGGATTATTCCATGCC+GGG | - | chr8_4:55661159-55661178 | Msa1334870:intron | 45.0% |
| CATGGCAAACACAGATCCTA+TGG | + | chr8_4:55661681-55661700 | None:intergenic | 45.0% | |
| ! | TGGCAAGAATCTTTTAGGCC+TGG | - | chr8_4:55662062-55662081 | Msa1334870:CDS | 45.0% |
| AGAAGCAGGACAGGATATAC+TGG | + | chr8_4:55662281-55662300 | None:intergenic | 45.0% | |
| ATTTGCAGGTGTTTGGAGGA+AGG | - | chr8_4:55662321-55662340 | Msa1334870:intron | 45.0% | |
| ATGAGAGGTGAAGTGAAGGA+TGG | - | chr8_4:55662408-55662427 | Msa1334870:CDS | 45.0% | |
| GGATCACATGAATGACGCAT+TGG | + | chr8_4:55662504-55662523 | None:intergenic | 45.0% | |
| !! | GATAATGTTGATGGCGAGAG+TGG | + | chr8_4:55662546-55662565 | None:intergenic | 45.0% |
| TCAACTCCGTCAAATTCGAC+CGG | + | chr8_4:55660732-55660751 | None:intergenic | 45.0% | |
| GTCGAATTTGACGGAGTTGA+TGG | - | chr8_4:55660732-55660751 | Msa1334870:CDS | 45.0% | |
| !! | GAATTTGACGGAGTTGATGG+AGG | - | chr8_4:55660735-55660754 | Msa1334870:CDS | 45.0% |
| TTGATGGAGGAATCACCTTC+AGG | - | chr8_4:55660748-55660767 | Msa1334870:CDS | 45.0% | |
| !!! | AGCTCTCCAGTTTTTGGGAT+TGG | - | chr8_4:55660989-55661008 | Msa1334870:intron | 45.0% |
| !!! | CTCCAGTTTTTGGGATTGGA+TGG | - | chr8_4:55660993-55661012 | Msa1334870:intron | 45.0% |
| CTCCATCCAATCCCAAAAAC+TGG | + | chr8_4:55660998-55661017 | None:intergenic | 45.0% | |
| GATGGAGAGAACAGTGATGT+TGG | - | chr8_4:55661011-55661030 | Msa1334870:intron | 45.0% | |
| !! | ATGACGGATTATTCCATGCC+GGG | - | chr8_4:55661159-55661178 | Msa1334870:intron | 45.0% |
| CATGGCAAACACAGATCCTA+TGG | + | chr8_4:55661681-55661700 | None:intergenic | 45.0% | |
| ! | TGGCAAGAATCTTTTAGGCC+TGG | - | chr8_4:55662062-55662081 | Msa1334870:CDS | 45.0% |
| AGAAGCAGGACAGGATATAC+TGG | + | chr8_4:55662281-55662300 | None:intergenic | 45.0% | |
| ATTTGCAGGTGTTTGGAGGA+AGG | - | chr8_4:55662321-55662340 | Msa1334870:intron | 45.0% | |
| ATGAGAGGTGAAGTGAAGGA+TGG | - | chr8_4:55662408-55662427 | Msa1334870:CDS | 45.0% | |
| GGATCACATGAATGACGCAT+TGG | + | chr8_4:55662504-55662523 | None:intergenic | 45.0% | |
| !! | GATAATGTTGATGGCGAGAG+TGG | + | chr8_4:55662546-55662565 | None:intergenic | 45.0% |
| !!! | TTTATTTTGAAATTTTATAT+TGG | - | chr8_4:55661291-55661310 | Msa1334870:intron | 5.0% |
| !!! | TATTTTATTTTTTACTTTAT+TGG | - | chr8_4:55661904-55661923 | Msa1334870:intron | 5.0% |
| !!! | TTTATTTTGAAATTTTATAT+TGG | - | chr8_4:55661291-55661310 | Msa1334870:intron | 5.0% |
| !!! | TATTTTATTTTTTACTTTAT+TGG | - | chr8_4:55661904-55661923 | Msa1334870:intron | 5.0% |
| ATTCGACCGGAAAATCTCGC+CGG | + | chr8_4:55660719-55660738 | None:intergenic | 50.0% | |
| TGCAATTCACCTGCACCTGA+AGG | + | chr8_4:55660766-55660785 | None:intergenic | 50.0% | |
| !! | TGACGGATTATTCCATGCCG+GGG | - | chr8_4:55661160-55661179 | Msa1334870:intron | 50.0% |
| TCCAGTGGTGATCATGTCGT+CGG | - | chr8_4:55661386-55661405 | Msa1334870:intron | 50.0% | |
| GTTGGGTCTTCAGGGAAATC+TGG | + | chr8_4:55661858-55661877 | None:intergenic | 50.0% | |
| AGTGGTGAGAACACTGACGA+TGG | + | chr8_4:55662528-55662547 | None:intergenic | 50.0% | |
| ATTCGACCGGAAAATCTCGC+CGG | + | chr8_4:55660719-55660738 | None:intergenic | 50.0% | |
| TGCAATTCACCTGCACCTGA+AGG | + | chr8_4:55660766-55660785 | None:intergenic | 50.0% | |
| !! | TGACGGATTATTCCATGCCG+GGG | - | chr8_4:55661160-55661179 | Msa1334870:intron | 50.0% |
| TCCAGTGGTGATCATGTCGT+CGG | - | chr8_4:55661386-55661405 | Msa1334870:intron | 50.0% | |
| GTTGGGTCTTCAGGGAAATC+TGG | + | chr8_4:55661858-55661877 | None:intergenic | 50.0% | |
| AGTGGTGAGAACACTGACGA+TGG | + | chr8_4:55662528-55662547 | None:intergenic | 50.0% | |
| GAGGAATCACCTTCAGGTGC+AGG | - | chr8_4:55660754-55660773 | Msa1334870:CDS | 55.0% | |
| GTTATGGTGGCAGGGTGTGA+AGG | - | chr8_4:55661125-55661144 | Msa1334870:intron | 55.0% | |
| TATTCCATGCCGGGGATGAC+AGG | - | chr8_4:55661168-55661187 | Msa1334870:intron | 55.0% | |
| ATATCCTGTCATCCCCGGCA+TGG | + | chr8_4:55661175-55661194 | None:intergenic | 55.0% | |
| TCCGACGACATGATCACCAC+TGG | + | chr8_4:55661390-55661409 | None:intergenic | 55.0% | |
| ATCGGTAGAAGGTTGCTGCC+AGG | + | chr8_4:55662083-55662102 | None:intergenic | 55.0% | |
| GTGTTTGGAGGAAGGAGCAG+AGG | - | chr8_4:55662329-55662348 | Msa1334870:intron | 55.0% | |
| GGTGAGAACACTGACGATGG+TGG | + | chr8_4:55662525-55662544 | None:intergenic | 55.0% | |
| GAGGAATCACCTTCAGGTGC+AGG | - | chr8_4:55660754-55660773 | Msa1334870:CDS | 55.0% | |
| GTTATGGTGGCAGGGTGTGA+AGG | - | chr8_4:55661125-55661144 | Msa1334870:intron | 55.0% | |
| TATTCCATGCCGGGGATGAC+AGG | - | chr8_4:55661168-55661187 | Msa1334870:intron | 55.0% | |
| ATATCCTGTCATCCCCGGCA+TGG | + | chr8_4:55661175-55661194 | None:intergenic | 55.0% | |
| TCCGACGACATGATCACCAC+TGG | + | chr8_4:55661390-55661409 | None:intergenic | 55.0% | |
| ATCGGTAGAAGGTTGCTGCC+AGG | + | chr8_4:55662083-55662102 | None:intergenic | 55.0% | |
| GTGTTTGGAGGAAGGAGCAG+AGG | - | chr8_4:55662329-55662348 | Msa1334870:intron | 55.0% | |
| GGTGAGAACACTGACGATGG+TGG | + | chr8_4:55662525-55662544 | None:intergenic | 55.0% | |
| !! | CAGTTTGCTATGGCTGCCGC+CGG | - | chr8_4:55660697-55660716 | Msa1334870:CDS | 60.0% |
| !! | CAGTTTGCTATGGCTGCCGC+CGG | - | chr8_4:55660697-55660716 | Msa1334870:CDS | 60.0% |
| ! | CTGCCGCCGGCGAGATTTTC+CGG | - | chr8_4:55660710-55660729 | Msa1334870:CDS | 65.0% |
| CGACCGGAAAATCTCGCCGG+CGG | + | chr8_4:55660716-55660735 | None:intergenic | 65.0% | |
| ! | CTGCCGCCGGCGAGATTTTC+CGG | - | chr8_4:55660710-55660729 | Msa1334870:CDS | 65.0% |
| CGACCGGAAAATCTCGCCGG+CGG | + | chr8_4:55660716-55660735 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 55660483 | 55662759 | 55660483 | ID=Msa1334870;Name=Msa1334870 |
| chr8_4 | mRNA | 55660483 | 55662759 | 55660483 | ID=Msa1334870-mRNA-1;Parent=Msa1334870;Name=Msa1334870-mRNA-1;_AED=0.11;_eAED=0.11;_QI=223|0.75|0.8|1|1|1|5|172|213 |
| chr8_4 | exon | 55660483 | 55660913 | 55660483 | ID=Msa1334870-mRNA-1:exon:17342;Parent=Msa1334870-mRNA-1 |
| chr8_4 | exon | 55661809 | 55661882 | 55661809 | ID=Msa1334870-mRNA-1:exon:17341;Parent=Msa1334870-mRNA-1 |
| chr8_4 | exon | 55662027 | 55662104 | 55662027 | ID=Msa1334870-mRNA-1:exon:17340;Parent=Msa1334870-mRNA-1 |
| chr8_4 | exon | 55662202 | 55662278 | 55662202 | ID=Msa1334870-mRNA-1:exon:17339;Parent=Msa1334870-mRNA-1 |
| chr8_4 | exon | 55662383 | 55662759 | 55662383 | ID=Msa1334870-mRNA-1:exon:17338;Parent=Msa1334870-mRNA-1 |
| chr8_4 | five_prime_UTR | 55662537 | 55662759 | 55662537 | ID=Msa1334870-mRNA-1:five_prime_utr;Parent=Msa1334870-mRNA-1 |
| chr8_4 | CDS | 55662383 | 55662536 | 55662383 | ID=Msa1334870-mRNA-1:cds;Parent=Msa1334870-mRNA-1 |
| chr8_4 | CDS | 55662202 | 55662278 | 55662202 | ID=Msa1334870-mRNA-1:cds;Parent=Msa1334870-mRNA-1 |
| chr8_4 | CDS | 55662027 | 55662104 | 55662027 | ID=Msa1334870-mRNA-1:cds;Parent=Msa1334870-mRNA-1 |
| chr8_4 | CDS | 55661809 | 55661882 | 55661809 | ID=Msa1334870-mRNA-1:cds;Parent=Msa1334870-mRNA-1 |
| chr8_4 | CDS | 55660655 | 55660913 | 55660655 | ID=Msa1334870-mRNA-1:cds;Parent=Msa1334870-mRNA-1 |
| chr8_4 | three_prime_UTR | 55660483 | 55660654 | 55660483 | ID=Msa1334870-mRNA-1:three_prime_utr;Parent=Msa1334870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
