Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213050 | XP_013458006.1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 3.89e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213050 | I3SNP1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 1.86e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1213050 | Msa1260230 | 0.839121 | 1.915190e-57 | -8.615850e-47 |
| Msa1213050 | Msa1300110 | 0.846898 | 1.626683e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213050 | MtrunA17_Chr4g0061551 | 97.561 | 123 | 3 | 0 | 1 | 123 | 1 | 123 | 2.54e-86 | 248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213050 | AT5G08060.1 | 53.846 | 130 | 55 | 2 | 1 | 125 | 1 | 130 | 1.32e-46 | 147 |
Find 86 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATCGTAAACGGTTTC+TGG | 0.123041 | 8_1:-73065443 | None:intergenic |
| ACCATGCTGCATCTACATTT+TGG | 0.192750 | 8_1:+73069129 | Msa1213050:three_prime_UTR |
| CTTGAAATTCCCTGTTTGTT+TGG | 0.223107 | 8_1:+73069047 | Msa1213050:three_prime_UTR |
| ATCCTCTTCAACAATAATAT+TGG | 0.235925 | 8_1:-73065591 | None:intergenic |
| CAATGTTCAGGGTATTATTA+AGG | 0.249157 | 8_1:+73069330 | Msa1213050:three_prime_UTR |
| CTTGGTAGTGGCGGGGCAAT+AGG | 0.256934 | 8_1:-73065393 | None:intergenic |
| CGTTTAAAATAGACAATTAC+AGG | 0.283108 | 8_1:-73068862 | None:intergenic |
| CAACTTTCTGTCTTTGTCAA+TGG | 0.297879 | 8_1:+73068812 | Msa1213050:three_prime_UTR |
| TCGTGCACTGTTCAATGTTC+AGG | 0.301853 | 8_1:+73069318 | Msa1213050:three_prime_UTR |
| GGTAAGGCGGATTTGAATTC+GGG | 0.330486 | 8_1:-73065350 | None:intergenic |
| GGGTAAGGCGGATTTGAATT+CGG | 0.340087 | 8_1:-73065351 | None:intergenic |
| CACTCATAATCCAAACAAAC+AGG | 0.350183 | 8_1:-73069057 | None:intergenic |
| ATCAATAATAAAAGGTTGTT+AGG | 0.354639 | 8_1:+73068901 | Msa1213050:three_prime_UTR |
| TTGAATTCGGGGTGGGAAAC+GGG | 0.360855 | 8_1:-73065338 | None:intergenic |
| TCCTCTTCAACAATAATATT+GGG | 0.376182 | 8_1:-73065590 | None:intergenic |
| TTTGAATTCGGGGTGGGAAA+CGG | 0.389873 | 8_1:-73065339 | None:intergenic |
| AACTTTCTGTCTTTGTCAAT+GGG | 0.396874 | 8_1:+73068813 | Msa1213050:three_prime_UTR |
| ACAATAATATTGGGATAAAT+CGG | 0.396910 | 8_1:-73065581 | None:intergenic |
| AAACTCTTGCGCGAAGAATC+AGG | 0.398005 | 8_1:-73069203 | None:intergenic |
| GATATCAGCTTTCTTGTAGA+TGG | 0.398615 | 8_1:-73065513 | None:intergenic |
| ATTAAGGACTCTTGTGTTGA+GGG | 0.420699 | 8_1:+73069346 | Msa1213050:three_prime_UTR |
| TCACCAGGTTTGTGCTATCA+TGG | 0.433416 | 8_1:+73068769 | Msa1213050:intron |
| GCTTTGAGAAAGTTTATTTG+TGG | 0.434917 | 8_1:+73069228 | Msa1213050:three_prime_UTR |
| ATAGTATTTGATATCGTAAA+CGG | 0.437783 | 8_1:-73065450 | None:intergenic |
| TTGTAGATGGTGCGAACAAT+GGG | 0.438576 | 8_1:-73065500 | None:intergenic |
| GGCGGTGGTTACCAATCTTA+AGG | 0.444855 | 8_1:+73065626 | Msa1213050:CDS |
| GACGGTTGCGGCGTTGATCA+CGG | 0.445310 | 8_1:-73065475 | None:intergenic |
| TTGGTAGTGGCGGGGCAATA+GGG | 0.455000 | 8_1:-73065392 | None:intergenic |
| AAAGCGCCATGGGAGATAAC+AGG | 0.462207 | 8_1:+73065314 | Msa1213050:CDS |
| TCCCAATATTATTGTTGAAG+AGG | 0.466589 | 8_1:+73065589 | Msa1213050:CDS |
| GCGTACTTATTTGTGTTCAT+CGG | 0.471396 | 8_1:+73068944 | Msa1213050:three_prime_UTR |
| TTCTGTCTTTGTCAATGGGA+AGG | 0.479278 | 8_1:+73068817 | Msa1213050:three_prime_UTR |
| ACGGTTTCTGGATCGGAAGT+TGG | 0.480049 | 8_1:-73065431 | None:intergenic |
| ATCGTAAACGGTTTCTGGAT+CGG | 0.484413 | 8_1:-73065438 | None:intergenic |
| AGCTTCTGCAATAGGGAGGA+TGG | 0.485294 | 8_1:-73065278 | None:intergenic |
| CTTGTAGATGGTGCGAACAA+TGG | 0.486997 | 8_1:-73065501 | None:intergenic |
| ACGGTTGCGGCGTTGATCAC+GGG | 0.489099 | 8_1:-73065474 | None:intergenic |
| GAACAATGGGAGGACGGTTG+CGG | 0.493599 | 8_1:-73065487 | None:intergenic |
| AACATAAATTTAGAAGAATG+AGG | 0.496414 | 8_1:-73069274 | None:intergenic |
| CGATGCGAATGGAATGGAGA+TGG | 0.500990 | 8_1:-73065227 | None:intergenic |
| TGAGAAAGTTTATTTGTGGA+TGG | 0.502712 | 8_1:+73069232 | Msa1213050:three_prime_UTR |
| CGTGCACTGTTCAATGTTCA+GGG | 0.512982 | 8_1:+73069319 | Msa1213050:three_prime_UTR |
| GATGCGAATGGAATGGAGAT+GGG | 0.515301 | 8_1:-73065226 | None:intergenic |
| GATATGAATGCTCGTGGCGG+TGG | 0.519485 | 8_1:+73065611 | Msa1213050:CDS |
| GTAATCGAGTGCTCCGGGTA+AGG | 0.522391 | 8_1:-73065366 | None:intergenic |
| TATTAAGGACTCTTGTGTTG+AGG | 0.524851 | 8_1:+73069345 | Msa1213050:three_prime_UTR |
| CAAACAAACAGGGAATTTCA+AGG | 0.525732 | 8_1:-73069046 | None:intergenic |
| CACCAGGTTTGTGCTATCAT+GGG | 0.527775 | 8_1:+73068770 | Msa1213050:intron |
| GACAAAGACAGAAAGTTGAC+TGG | 0.532321 | 8_1:-73068807 | None:intergenic |
| GGGACGGTAATCGAGTGCTC+CGG | 0.539030 | 8_1:-73065372 | None:intergenic |
| GGACGGTAATCGAGTGCTCC+GGG | 0.539896 | 8_1:-73065371 | None:intergenic |
| GCTTCTGCAATAGGGAGGAT+GGG | 0.541038 | 8_1:-73065277 | None:intergenic |
| GAATTCAAATCCGCCTTACC+CGG | 0.542162 | 8_1:+73065353 | Msa1213050:CDS |
| ACGGGTCCTGTTATCTCCCA+TGG | 0.545601 | 8_1:-73065320 | None:intergenic |
| ATTGTCATTGACTTGATATG+TGG | 0.545681 | 8_1:+73069008 | Msa1213050:three_prime_UTR |
| GGCGGATTTGAATTCGGGGT+GGG | 0.546935 | 8_1:-73065345 | None:intergenic |
| AAGCTGATATCGAGAAACTC+AGG | 0.555463 | 8_1:+73065525 | Msa1213050:CDS |
| CTTCTGCAATAGGGAGGATG+GGG | 0.560904 | 8_1:-73065276 | None:intergenic |
| GATTCTCGATGCGAATGGAA+TGG | 0.571340 | 8_1:-73065233 | None:intergenic |
| ATCGAGTGCTCCGGGTAAGG+CGG | 0.581020 | 8_1:-73065363 | None:intergenic |
| TCCAAAATGTAGATGCAGCA+TGG | 0.581960 | 8_1:-73069130 | None:intergenic |
| TTAAGGACTCTTGTGTTGAG+GGG | 0.596158 | 8_1:+73069347 | Msa1213050:three_prime_UTR |
| GGAGGATGGGGATTTCGCCA+TGG | 0.597858 | 8_1:-73065264 | None:intergenic |
| AAGCTTCATCAAAGCGCCAT+GGG | 0.605317 | 8_1:+73065304 | Msa1213050:CDS |
| AAAGCTTCATCAAAGCGCCA+TGG | 0.606824 | 8_1:+73065303 | Msa1213050:CDS |
| CTATTGCCCCGCCACTACCA+AGG | 0.608087 | 8_1:+73065394 | Msa1213050:CDS |
| TGGTGCGAACAATGGGAGGA+CGG | 0.610543 | 8_1:-73065493 | None:intergenic |
| AGAAGAATGAGGCAACATAG+AGG | 0.614244 | 8_1:-73069263 | None:intergenic |
| GTAAGGCGGATTTGAATTCG+GGG | 0.621827 | 8_1:-73065349 | None:intergenic |
| AAATGTAGATGCAGCATGGT+TGG | 0.622068 | 8_1:-73069126 | None:intergenic |
| TTTCAGCTTCTGCAATAGGG+AGG | 0.622425 | 8_1:-73065282 | None:intergenic |
| GAATCAGATTGAAAATTGAA+CGG | 0.629176 | 8_1:-73065203 | None:intergenic |
| TAGTGGCGGGGCAATAGGGA+CGG | 0.630605 | 8_1:-73065388 | None:intergenic |
| ATGCGAATGGAATGGAGATG+GGG | 0.633055 | 8_1:-73065225 | None:intergenic |
| TGATTGATTCTCGATGCGAA+TGG | 0.639448 | 8_1:-73065238 | None:intergenic |
| ATAATATTGGGATAAATCGG+AGG | 0.646994 | 8_1:-73065578 | None:intergenic |
| TAGATGGTGCGAACAATGGG+AGG | 0.648838 | 8_1:-73065497 | None:intergenic |
| GGTTGGTTGTTTAGCCACCG+TGG | 0.652043 | 8_1:-73069109 | None:intergenic |
| ACAAAGACAGAAAGTTGACT+GGG | 0.659008 | 8_1:-73068806 | None:intergenic |
| ATGATTTCAAAGTCTCTCCA+CGG | 0.660113 | 8_1:+73069092 | Msa1213050:three_prime_UTR |
| AGGCGGATTTGAATTCGGGG+TGG | 0.660754 | 8_1:-73065346 | None:intergenic |
| TCGAGAATCAATCACAACCA+TGG | 0.661556 | 8_1:+73065247 | Msa1213050:exon |
| ACTCATAATCCAAACAAACA+GGG | 0.681538 | 8_1:-73069056 | None:intergenic |
| GAAGAGGATATGAATGCTCG+TGG | 0.716215 | 8_1:+73065605 | Msa1213050:CDS |
| ATTTCAAAGTCTCTCCACGG+TGG | 0.747531 | 8_1:+73069095 | Msa1213050:three_prime_UTR |
| GAGGATATGAATGCTCGTGG+CGG | 0.770619 | 8_1:+73065608 | Msa1213050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTAAAGAAATTTAAA+TGG | + | chr8_1:73066968-73066987 | Msa1213050:intron | 10.0% |
| !! | TTGGTATAAAAAATAATTAA+AGG | + | chr8_1:73068083-73068102 | Msa1213050:intron | 10.0% |
| !! | TTAGGAAAATAAAAATAAAA+AGG | + | chr8_1:73068328-73068347 | Msa1213050:intron | 10.0% |
| !!! | TTTTTACTTTATTTTCTTGA+GGG | - | chr8_1:73066289-73066308 | None:intergenic | 15.0% |
| !!! | ATTTTTACTTTATTTTCTTG+AGG | - | chr8_1:73066290-73066309 | None:intergenic | 15.0% |
| !! | AGAAAATAAAGTAAAAATAG+CGG | + | chr8_1:73066292-73066311 | Msa1213050:intron | 15.0% |
| !!! | ATTTTGATGTTATATTGTTT+TGG | + | chr8_1:73066909-73066928 | Msa1213050:intron | 15.0% |
| !! | GCCTATTATTAATAATATTT+GGG | + | chr8_1:73067248-73067267 | Msa1213050:intron | 15.0% |
| !! | TCCCAAATATTATTAATAAT+AGG | - | chr8_1:73067252-73067271 | None:intergenic | 15.0% |
| !!! | AGCTAAAGTTTAAAATATAT+TGG | + | chr8_1:73068017-73068036 | Msa1213050:intron | 15.0% |
| !!! | TTTTTTCTACTTCATTATTA+TGG | + | chr8_1:73068048-73068067 | Msa1213050:intron | 15.0% |
| !!! | TAATATCATATTTTTCTGTT+TGG | + | chr8_1:73068447-73068466 | Msa1213050:intron | 15.0% |
| !! | AATATAGTATGCTATAAATT+TGG | - | chr8_1:73068548-73068567 | None:intergenic | 15.0% |
| !!! | CATTTTGTATCAATAATAAA+AGG | + | chr8_1:73068893-73068912 | Msa1213050:three_prime_UTR | 15.0% |
| !! | TTGTTAAAAAGTCAATAATA+AGG | - | chr8_1:73068986-73069005 | None:intergenic | 15.0% |
| !! | ATAGTATTTGATATCGTAAA+CGG | - | chr8_1:73065453-73065472 | None:intergenic | 20.0% |
| !! | ACAATAATATTGGGATAAAT+CGG | - | chr8_1:73065584-73065603 | None:intergenic | 20.0% |
| !!! | TTGTTGATGATTAATTGATT+AGG | + | chr8_1:73065682-73065701 | Msa1213050:intron | 20.0% |
| !!! | TGTTGATGATTAATTGATTA+GGG | + | chr8_1:73065683-73065702 | Msa1213050:intron | 20.0% |
| !! | TGTAATTGAAATTGTATTTC+CGG | + | chr8_1:73065792-73065811 | Msa1213050:intron | 20.0% |
| !!! | GGTATATTTATTGATTAAAG+TGG | + | chr8_1:73065853-73065872 | Msa1213050:intron | 20.0% |
| !!! | GTATTATTCTACTTTTGAAA+TGG | - | chr8_1:73065918-73065937 | None:intergenic | 20.0% |
| !!! | TTTCTAAAATTCTGAAAAAG+AGG | + | chr8_1:73066373-73066392 | Msa1213050:intron | 20.0% |
| !!! | TTCTAAAATTCTGAAAAAGA+GGG | + | chr8_1:73066374-73066393 | Msa1213050:intron | 20.0% |
| !! | CATTCAATAAATGATGTATT+TGG | + | chr8_1:73066793-73066812 | Msa1213050:intron | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+TGG | - | chr8_1:73066768-73066787 | None:intergenic | 20.0% |
| !! | TTTGGATAAATTAAATACCT+TGG | + | chr8_1:73066927-73066946 | Msa1213050:intron | 20.0% |
| !! | GGCCTATTATTAATAATATT+TGG | + | chr8_1:73067247-73067266 | Msa1213050:intron | 20.0% |
| !!! | TAGTTCAATGGAAAATTTTA+AGG | - | chr8_1:73067323-73067342 | None:intergenic | 20.0% |
| !!! | AGTTTAAAATATATTGGTGT+TGG | + | chr8_1:73068023-73068042 | Msa1213050:intron | 20.0% |
| !!! | ATTATGGTTTGATGTTATTT+TGG | + | chr8_1:73068064-73068083 | Msa1213050:intron | 20.0% |
| !!! | TATATAAATTGATCTGGAAT+TGG | - | chr8_1:73068636-73068655 | None:intergenic | 20.0% |
| !! | AAAGTGTATATAAATTGATC+TGG | - | chr8_1:73068642-73068661 | None:intergenic | 20.0% |
| !!! | CTGTAATTGTCTATTTTAAA+CGG | + | chr8_1:73068863-73068882 | Msa1213050:three_prime_UTR | 20.0% |
| !! | ATCAATAATAAAAGGTTGTT+AGG | + | chr8_1:73068901-73068920 | Msa1213050:three_prime_UTR | 20.0% |
| !!! | AATGAATCCTCATTTTTTTT+AGG | + | chr8_1:73069153-73069172 | Msa1213050:three_prime_UTR | 20.0% |
| !! | AAAATTGCCTAAAAAAAATG+AGG | - | chr8_1:73069163-73069182 | None:intergenic | 20.0% |
| !! | AACATAAATTTAGAAGAATG+AGG | - | chr8_1:73069277-73069296 | None:intergenic | 20.0% |
| ! | GAATCAGATTGAAAATTGAA+CGG | - | chr8_1:73065206-73065225 | None:intergenic | 25.0% |
| ! | TCCTCTTCAACAATAATATT+GGG | - | chr8_1:73065593-73065612 | None:intergenic | 25.0% |
| ! | ATCCTCTTCAACAATAATAT+TGG | - | chr8_1:73065594-73065613 | None:intergenic | 25.0% |
| ! | AAAAAATGTGACCTTAAGAT+TGG | - | chr8_1:73065640-73065659 | None:intergenic | 25.0% |
| !!! | ATTTCCGGTTAATTTGTTTA+TGG | + | chr8_1:73065807-73065826 | Msa1213050:intron | 25.0% |
| ! | AAAGCCATAAACAAATTAAC+CGG | - | chr8_1:73065814-73065833 | None:intergenic | 25.0% |
| !!! | AGTTCCAACAATTTTTTATC+TGG | + | chr8_1:73066150-73066169 | Msa1213050:intron | 25.0% |
| ! | GTATCCAGATAAAAAATTGT+TGG | - | chr8_1:73066157-73066176 | None:intergenic | 25.0% |
| !! | CCAGATTATCAATTTTCAAA+AGG | - | chr8_1:73066206-73066225 | None:intergenic | 25.0% |
| !!! | CCTTTTGAAAATTGATAATC+TGG | + | chr8_1:73066203-73066222 | Msa1213050:intron | 25.0% |
| ! | AAAAAAAGTCCTTCTAATCA+TGG | - | chr8_1:73066263-73066282 | None:intergenic | 25.0% |
| !! | TAAAAATAGCGGAGTAAAAT+AGG | + | chr8_1:73066303-73066322 | Msa1213050:intron | 25.0% |
| !! | AAAAATAGCGGAGTAAAATA+GGG | + | chr8_1:73066304-73066323 | Msa1213050:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_1:73066866-73066885 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_1:73066866-73066885 | Msa1213050:intron | 25.0% |
| ! | ATCATGAAAATTACAAACCA+AGG | - | chr8_1:73066947-73066966 | None:intergenic | 25.0% |
| ! | AAATACTTGTATCTAGATTC+TGG | - | chr8_1:73067112-73067131 | None:intergenic | 25.0% |
| ! | TGATGTTAAAAAGAGAGATA+CGG | + | chr8_1:73067291-73067310 | Msa1213050:intron | 25.0% |
| !!! | ATCAAATGTTTCTAGTTCAA+TGG | - | chr8_1:73067335-73067354 | None:intergenic | 25.0% |
| ! | AACAACACAGATGAAAATTT+GGG | + | chr8_1:73067391-73067410 | Msa1213050:intron | 25.0% |
| ! | TATGAATAGAGTCTTAAAGA+AGG | - | chr8_1:73067448-73067467 | None:intergenic | 25.0% |
| ! | TAAGAGGCTAATTACTAATT+AGG | + | chr8_1:73067802-73067821 | Msa1213050:intron | 25.0% |
| ! | AAAAATCGTAGTCTAGATAA+GGG | - | chr8_1:73067857-73067876 | None:intergenic | 25.0% |
| ! | GACACAATTTCATTTCATAT+AGG | + | chr8_1:73068282-73068301 | Msa1213050:intron | 25.0% |
| ! | AAAAAATTGCTTACAGCATA+GGG | - | chr8_1:73068411-73068430 | None:intergenic | 25.0% |
| ! | TAAAAAATTGCTTACAGCAT+AGG | - | chr8_1:73068412-73068431 | None:intergenic | 25.0% |
| !! | CGTTTAAAATAGACAATTAC+AGG | - | chr8_1:73068865-73068884 | None:intergenic | 25.0% |
| ATAATATTGGGATAAATCGG+AGG | - | chr8_1:73065581-73065600 | None:intergenic | 30.0% | |
| TCCCAATATTATTGTTGAAG+AGG | + | chr8_1:73065589-73065608 | Msa1213050:CDS | 30.0% | |
| ! | TTTGTTTATGGCTTTTCGAA+AGG | + | chr8_1:73065819-73065838 | Msa1213050:intron | 30.0% |
| ! | TTGTTTATGGCTTTTCGAAA+GGG | + | chr8_1:73065820-73065839 | Msa1213050:intron | 30.0% |
| ! | TTGCATACTGATTAGATAGA+TGG | + | chr8_1:73065939-73065958 | Msa1213050:intron | 30.0% |
| TCATACAACAAGTTACTAGA+CGG | - | chr8_1:73066062-73066081 | None:intergenic | 30.0% | |
| ! | AATTGATAATCTGGAACATG+CGG | + | chr8_1:73066212-73066231 | Msa1213050:intron | 30.0% |
| ! | AAAATAGCGGAGTAAAATAG+GGG | + | chr8_1:73066305-73066324 | Msa1213050:intron | 30.0% |
| TTAGAAAAACATCACTGTTG+CGG | - | chr8_1:73066360-73066379 | None:intergenic | 30.0% | |
| ATTATAATAACTACTCCCTC+CGG | + | chr8_1:73066736-73066755 | Msa1213050:intron | 30.0% | |
| ATTTCTCGTAGTTATAGTGT+GGG | + | chr8_1:73067030-73067049 | Msa1213050:intron | 30.0% | |
| TTGTATATTCACACCCAAAT+AGG | + | chr8_1:73067360-73067379 | Msa1213050:intron | 30.0% | |
| TTGTTCTTCTAGTCCTATTT+GGG | - | chr8_1:73067376-73067395 | None:intergenic | 30.0% | |
| GAACAACACAGATGAAAATT+TGG | + | chr8_1:73067390-73067409 | Msa1213050:intron | 30.0% | |
| TAATTCATACTGACAAACAC+AGG | + | chr8_1:73067466-73067485 | Msa1213050:intron | 30.0% | |
| GCTAAAGAAACAGATGATTT+GGG | - | chr8_1:73067506-73067525 | None:intergenic | 30.0% | |
| AGCTAAAGAAACAGATGATT+TGG | - | chr8_1:73067507-73067526 | None:intergenic | 30.0% | |
| CATTACCTTTCATTTCTAAG+AGG | + | chr8_1:73067786-73067805 | Msa1213050:intron | 30.0% | |
| ! | ATTAGCCTCTTAGAAATGAA+AGG | - | chr8_1:73067794-73067813 | None:intergenic | 30.0% |
| AAAATCGTAGTCTAGATAAG+GGG | - | chr8_1:73067856-73067875 | None:intergenic | 30.0% | |
| CAAAAATCGTAGTCTAGATA+AGG | - | chr8_1:73067858-73067877 | None:intergenic | 30.0% | |
| ! | CTTATCTAGACTACGATTTT+TGG | + | chr8_1:73067856-73067875 | Msa1213050:intron | 30.0% |
| TGATGATATGTCTTCAATTC+TGG | + | chr8_1:73067886-73067905 | Msa1213050:intron | 30.0% | |
| ATAGTAGTATGAAGATACAC+TGG | + | chr8_1:73068161-73068180 | Msa1213050:intron | 30.0% | |
| AAATGAAATTGTGTCCAAAC+AGG | - | chr8_1:73068277-73068296 | None:intergenic | 30.0% | |
| !!! | TGCTGTAAGCAATTTTTTAG+AGG | + | chr8_1:73068413-73068432 | Msa1213050:intron | 30.0% |
| AACTTTCTGTCTTTGTCAAT+GGG | + | chr8_1:73068813-73068832 | Msa1213050:three_prime_UTR | 30.0% | |
| !! | ATTGTCATTGACTTGATATG+TGG | + | chr8_1:73069008-73069027 | Msa1213050:three_prime_UTR | 30.0% |
| ACTCATAATCCAAACAAACA+GGG | - | chr8_1:73069059-73069078 | None:intergenic | 30.0% | |
| !! | GCTTTGAGAAAGTTTATTTG+TGG | + | chr8_1:73069228-73069247 | Msa1213050:three_prime_UTR | 30.0% |
| TGAGAAAGTTTATTTGTGGA+TGG | + | chr8_1:73069232-73069251 | Msa1213050:three_prime_UTR | 30.0% | |
| ! | CAATGTTCAGGGTATTATTA+AGG | + | chr8_1:73069330-73069349 | Msa1213050:three_prime_UTR | 30.0% |
| !!! | TGGAATAATCGCTTTTTCCT+TGG | - | chr8_1:73065414-73065433 | None:intergenic | 35.0% |
| TTGATATCGTAAACGGTTTC+TGG | - | chr8_1:73065446-73065465 | None:intergenic | 35.0% | |
| GATATCAGCTTTCTTGTAGA+TGG | - | chr8_1:73065516-73065535 | None:intergenic | 35.0% | |
| ! | ATTGCTCTTTGAGTTTGACT+AGG | + | chr8_1:73065715-73065734 | Msa1213050:intron | 35.0% |
| ! | TTGCTCTTTGAGTTTGACTA+GGG | + | chr8_1:73065716-73065735 | Msa1213050:intron | 35.0% |
| ! | GATAGATGGTTTGTATGAAG+AGG | + | chr8_1:73065953-73065972 | Msa1213050:intron | 35.0% |
| AATTAGTGCAAAGTAGTCTG+TGG | + | chr8_1:73065982-73066001 | Msa1213050:intron | 35.0% | |
| ! | GTGCTAATGCTTGTCTTTTA+TGG | + | chr8_1:73066031-73066050 | Msa1213050:intron | 35.0% |
| GAGCAGATGAAATGCATAAT+AGG | + | chr8_1:73066123-73066142 | Msa1213050:intron | 35.0% | |
| TGATGTTAGTCCATAAGAGT+AGG | + | chr8_1:73066177-73066196 | Msa1213050:intron | 35.0% | |
| GATGTTAGTCCATAAGAGTA+GGG | + | chr8_1:73066178-73066197 | Msa1213050:intron | 35.0% | |
| ! | ATTGATAATCTGGAACATGC+GGG | + | chr8_1:73066213-73066232 | Msa1213050:intron | 35.0% |
| TTGTTGACACCATGATTAGA+AGG | + | chr8_1:73066251-73066270 | Msa1213050:intron | 35.0% | |
| ATTGAGTTCAGACGCAATAT+GGG | - | chr8_1:73066331-73066350 | None:intergenic | 35.0% | |
| ! | TTCTGAAAAAGAGGGAAATC+TGG | + | chr8_1:73066382-73066401 | Msa1213050:intron | 35.0% |
| GATTTCTCGTAGTTATAGTG+TGG | + | chr8_1:73067029-73067048 | Msa1213050:intron | 35.0% | |
| AGTTGTTATCCACTCAAGTA+TGG | + | chr8_1:73067083-73067102 | Msa1213050:intron | 35.0% | |
| GTTGTTATCCACTCAAGTAT+GGG | + | chr8_1:73067084-73067103 | Msa1213050:intron | 35.0% | |
| TTGTTATCCACTCAAGTATG+GGG | + | chr8_1:73067085-73067104 | Msa1213050:intron | 35.0% | |
| !!! | AGTATTTTTTTCCCAACTGC+AGG | + | chr8_1:73067125-73067144 | Msa1213050:intron | 35.0% |
| GTTGACAATAGGTAAGGTAT+GGG | - | chr8_1:73067183-73067202 | None:intergenic | 35.0% | |
| ATATGGATGAGGTTGACAAT+AGG | - | chr8_1:73067194-73067213 | None:intergenic | 35.0% | |
| GTTGTTCTTCTAGTCCTATT+TGG | - | chr8_1:73067377-73067396 | None:intergenic | 35.0% | |
| ! | AATCAGCACAACGCATTTTT+CGG | + | chr8_1:73067417-73067436 | Msa1213050:intron | 35.0% |
| ATAGAGTCTTAAAGAAGGAG+CGG | - | chr8_1:73067443-73067462 | None:intergenic | 35.0% | |
| ! | AAACACAGGTAAACCCTTTT+GGG | + | chr8_1:73067480-73067499 | Msa1213050:intron | 35.0% |
| AATGAGAAGAGACAAAACAG+AGG | - | chr8_1:73067539-73067558 | None:intergenic | 35.0% | |
| TAACGTTTGAACCCATTTGT+AGG | + | chr8_1:73067760-73067779 | Msa1213050:intron | 35.0% | |
| ! | AGGTTGTCATTCAGAGTATT+TGG | + | chr8_1:73068103-73068122 | Msa1213050:intron | 35.0% |
| AAATAGCTTCAAACACAGGT+AGG | - | chr8_1:73068196-73068215 | None:intergenic | 35.0% | |
| TGTGTTATCCTTATCCTGTT+TGG | + | chr8_1:73068260-73068279 | Msa1213050:intron | 35.0% | |
| AATTGTGTCCAAACAGGATA+AGG | - | chr8_1:73068271-73068290 | None:intergenic | 35.0% | |
| ! | TGCTCACTGGTTAGTTATTT+AGG | + | chr8_1:73068310-73068329 | Msa1213050:intron | 35.0% |
| ! | GATGCTAAATTTTGCAACTG+CGG | + | chr8_1:73068350-73068369 | Msa1213050:intron | 35.0% |
| GGACACAATCTCGATATATT+AGG | + | chr8_1:73068468-73068487 | Msa1213050:intron | 35.0% | |
| !!! | AATTTTGTGAGCACTGAAAC+AGG | - | chr8_1:73068667-73068686 | None:intergenic | 35.0% |
| ACAAAGACAGAAAGTTGACT+GGG | - | chr8_1:73068809-73068828 | None:intergenic | 35.0% | |
| CAACTTTCTGTCTTTGTCAA+TGG | + | chr8_1:73068812-73068831 | Msa1213050:three_prime_UTR | 35.0% | |
| GCGTACTTATTTGTGTTCAT+CGG | + | chr8_1:73068944-73068963 | Msa1213050:three_prime_UTR | 35.0% | |
| CAAACAAACAGGGAATTTCA+AGG | - | chr8_1:73069049-73069068 | None:intergenic | 35.0% | |
| CTTGAAATTCCCTGTTTGTT+TGG | + | chr8_1:73069047-73069066 | Msa1213050:three_prime_UTR | 35.0% | |
| CACTCATAATCCAAACAAAC+AGG | - | chr8_1:73069060-73069079 | None:intergenic | 35.0% | |
| ATGATTTCAAAGTCTCTCCA+CGG | + | chr8_1:73069092-73069111 | Msa1213050:three_prime_UTR | 35.0% | |
| ! | TGATTGATTCTCGATGCGAA+TGG | - | chr8_1:73065241-73065260 | None:intergenic | 40.0% |
| TCGAGAATCAATCACAACCA+TGG | + | chr8_1:73065247-73065266 | Msa1213050:exon | 40.0% | |
| ! | GCTTTTCAGCTTCTGCAATA+GGG | - | chr8_1:73065288-73065307 | None:intergenic | 40.0% |
| ! | AGCTTTTCAGCTTCTGCAAT+AGG | - | chr8_1:73065289-73065308 | None:intergenic | 40.0% |
| !!! | AATCGCTTTTTCCTTGGTAG+TGG | - | chr8_1:73065408-73065427 | None:intergenic | 40.0% |
| ! | ATCGTAAACGGTTTCTGGAT+CGG | - | chr8_1:73065441-73065460 | None:intergenic | 40.0% |
| TTGTAGATGGTGCGAACAAT+GGG | - | chr8_1:73065503-73065522 | None:intergenic | 40.0% | |
| AAGCTGATATCGAGAAACTC+AGG | + | chr8_1:73065525-73065544 | Msa1213050:CDS | 40.0% | |
| GTTTGACTAGGGTTGAAGTT+TGG | + | chr8_1:73065727-73065746 | Msa1213050:intron | 40.0% | |
| ! | TTTCGAAAGGGCATAGCATT+TGG | + | chr8_1:73065832-73065851 | Msa1213050:intron | 40.0% |
| CAAAAGGAACCCTACTCTTA+TGG | - | chr8_1:73066190-73066209 | None:intergenic | 40.0% | |
| GAACATGCGGGAAAAATCAT+TGG | + | chr8_1:73066225-73066244 | Msa1213050:intron | 40.0% | |
| GATTGAGTTCAGACGCAATA+TGG | - | chr8_1:73066332-73066351 | None:intergenic | 40.0% | |
| TAGAAGAAGAGTCACAGTAG+TGG | + | chr8_1:73066454-73066473 | Msa1213050:intron | 40.0% | |
| AGAAGTGACGAGTTAAGTAG+AGG | + | chr8_1:73066534-73066553 | Msa1213050:intron | 40.0% | |
| TAGTAGAAGAGTCACAGTAG+AGG | + | chr8_1:73066635-73066654 | Msa1213050:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_1:73066870-73066889 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_1:73066869-73066888 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_1:73066869-73066888 | Msa1213050:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_1:73066870-73066889 | Msa1213050:intron | 40.0% | |
| TCTCAAATAAGTACTCCCTC+CGG | - | chr8_1:73066888-73066907 | None:intergenic | 40.0% | |
| TTATAGTGTGGGTAAGAGAG+CGG | + | chr8_1:73067041-73067060 | Msa1213050:intron | 40.0% | |
| !!! | TTTTTTCCCAACTGCAGGAA+TGG | + | chr8_1:73067130-73067149 | Msa1213050:intron | 40.0% |
| ! | TTTTTCCCAACTGCAGGAAT+GGG | + | chr8_1:73067131-73067150 | Msa1213050:intron | 40.0% |
| CAATAGGTAAGGTATGGGTA+GGG | - | chr8_1:73067178-73067197 | None:intergenic | 40.0% | |
| ACAATAGGTAAGGTATGGGT+AGG | - | chr8_1:73067179-73067198 | None:intergenic | 40.0% | |
| GGTTGACAATAGGTAAGGTA+TGG | - | chr8_1:73067184-73067203 | None:intergenic | 40.0% | |
| GATGAGGTTGACAATAGGTA+AGG | - | chr8_1:73067189-73067208 | None:intergenic | 40.0% | |
| GTCAACCTCATCCATATACA+CGG | + | chr8_1:73067197-73067216 | Msa1213050:intron | 40.0% | |
| TATAGCCGTGTATATGGATG+AGG | - | chr8_1:73067205-73067224 | None:intergenic | 40.0% | |
| GCTATACCTTGCAAAAACAC+AGG | + | chr8_1:73067219-73067238 | Msa1213050:intron | 40.0% | |
| !! | CATTGACCTGTGTTTTTGCA+AGG | - | chr8_1:73067228-73067247 | None:intergenic | 40.0% |
| CTTGCAAAAACACAGGTCAA+TGG | + | chr8_1:73067226-73067245 | Msa1213050:intron | 40.0% | |
| TGGGAGAATGATGAATGATG+TGG | + | chr8_1:73067267-73067286 | Msa1213050:intron | 40.0% | |
| ! | CAAACACAGGTAAACCCTTT+TGG | + | chr8_1:73067479-73067498 | Msa1213050:intron | 40.0% |
| GTGATAGAAAACTTCTGCCA+TGG | + | chr8_1:73067717-73067736 | Msa1213050:intron | 40.0% | |
| AGGTAATGCTGCCTACAAAT+GGG | - | chr8_1:73067774-73067793 | None:intergenic | 40.0% | |
| AAGGTAATGCTGCCTACAAA+TGG | - | chr8_1:73067775-73067794 | None:intergenic | 40.0% | |
| ! | TCACCCTGCTATAGTGTTTT+TGG | + | chr8_1:73067956-73067975 | Msa1213050:intron | 40.0% |
| ! | CACCCTGCTATAGTGTTTTT+GGG | + | chr8_1:73067957-73067976 | Msa1213050:intron | 40.0% |
| !! | ACCCTGCTATAGTGTTTTTG+GGG | + | chr8_1:73067958-73067977 | Msa1213050:intron | 40.0% |
| TAAACTTTAGCTGCCAATCC+TGG | - | chr8_1:73068009-73068028 | None:intergenic | 40.0% | |
| CAGCAAATAGCTTCAAACAC+AGG | - | chr8_1:73068200-73068219 | None:intergenic | 40.0% | |
| ! | GTGTTTGAAGCTATTTGCTG+AGG | + | chr8_1:73068200-73068219 | Msa1213050:intron | 40.0% |
| ATTAGGCCAAATTGCTCACT+TGG | + | chr8_1:73068485-73068504 | Msa1213050:intron | 40.0% | |
| AGGTAACCAAGTGAGCAATT+TGG | - | chr8_1:73068494-73068513 | None:intergenic | 40.0% | |
| ATTTGGACTCCCATTTGTTC+CGG | - | chr8_1:73068531-73068550 | None:intergenic | 40.0% | |
| AAATGTCTTTCCATGTCACC+AGG | + | chr8_1:73068754-73068773 | Msa1213050:intron | 40.0% | |
| GACAAAGACAGAAAGTTGAC+TGG | - | chr8_1:73068810-73068829 | None:intergenic | 40.0% | |
| TTCTGTCTTTGTCAATGGGA+AGG | + | chr8_1:73068817-73068836 | Msa1213050:three_prime_UTR | 40.0% | |
| AAATGTAGATGCAGCATGGT+TGG | - | chr8_1:73069129-73069148 | None:intergenic | 40.0% | |
| ! | ACCATGCTGCATCTACATTT+TGG | + | chr8_1:73069129-73069148 | Msa1213050:three_prime_UTR | 40.0% |
| TCCAAAATGTAGATGCAGCA+TGG | - | chr8_1:73069133-73069152 | None:intergenic | 40.0% | |
| AGAAGAATGAGGCAACATAG+AGG | - | chr8_1:73069266-73069285 | None:intergenic | 40.0% | |
| ATGCGAATGGAATGGAGATG+GGG | - | chr8_1:73065228-73065247 | None:intergenic | 45.0% | |
| GATGCGAATGGAATGGAGAT+GGG | - | chr8_1:73065229-73065248 | None:intergenic | 45.0% | |
| GATTCTCGATGCGAATGGAA+TGG | - | chr8_1:73065236-73065255 | None:intergenic | 45.0% | |
| TTTCAGCTTCTGCAATAGGG+AGG | - | chr8_1:73065285-73065304 | None:intergenic | 45.0% | |
| ! | AAAGCTTCATCAAAGCGCCA+TGG | + | chr8_1:73065303-73065322 | Msa1213050:CDS | 45.0% |
| ! | AAGCTTCATCAAAGCGCCAT+GGG | + | chr8_1:73065304-73065323 | Msa1213050:CDS | 45.0% |
| TTTGAATTCGGGGTGGGAAA+CGG | - | chr8_1:73065342-73065361 | None:intergenic | 45.0% | |
| ! | GTAAGGCGGATTTGAATTCG+GGG | - | chr8_1:73065352-73065371 | None:intergenic | 45.0% |
| ! | GGTAAGGCGGATTTGAATTC+GGG | - | chr8_1:73065353-73065372 | None:intergenic | 45.0% |
| ! | GGGTAAGGCGGATTTGAATT+CGG | - | chr8_1:73065354-73065373 | None:intergenic | 45.0% |
| GAATTCAAATCCGCCTTACC+CGG | + | chr8_1:73065353-73065372 | Msa1213050:CDS | 45.0% | |
| CTTGTAGATGGTGCGAACAA+TGG | - | chr8_1:73065504-73065523 | None:intergenic | 45.0% | |
| GAAGAGGATATGAATGCTCG+TGG | + | chr8_1:73065605-73065624 | Msa1213050:CDS | 45.0% | |
| AAACATCACTGTTGCGGTGT+TGG | - | chr8_1:73066354-73066373 | None:intergenic | 45.0% | |
| AAGAAGAGTCACAGTAGTGG+AGG | + | chr8_1:73066457-73066476 | Msa1213050:intron | 45.0% | |
| AGTGACGAGTTAAGTAGAGG+AGG | + | chr8_1:73066537-73066556 | Msa1213050:intron | 45.0% | |
| TATAGTGTGGGTAAGAGAGC+GGG | + | chr8_1:73067042-73067061 | Msa1213050:intron | 45.0% | |
| ! | TTTTCCCAACTGCAGGAATG+GGG | + | chr8_1:73067132-73067151 | Msa1213050:intron | 45.0% |
| GCAAGGTATAGCCGTGTATA+TGG | - | chr8_1:73067211-73067230 | None:intergenic | 45.0% | |
| ! | CAGATGATTTGGGCCCAAAA+GGG | - | chr8_1:73067496-73067515 | None:intergenic | 45.0% |
| ! | ACAGATGATTTGGGCCCAAA+AGG | - | chr8_1:73067497-73067516 | None:intergenic | 45.0% |
| TGTCGCTCAGTTGTTCTGTT+GGG | - | chr8_1:73067608-73067627 | None:intergenic | 45.0% | |
| TTGATCGTGATTGTGCGTCT+AGG | + | chr8_1:73067675-73067694 | Msa1213050:intron | 45.0% | |
| TGTGCGTCTAGGCAATGAAA+AGG | + | chr8_1:73067686-73067705 | Msa1213050:intron | 45.0% | |
| TAACAGCCAAGAACTCTCCA+TGG | - | chr8_1:73067737-73067756 | None:intergenic | 45.0% | |
| TGGAGAGTTCTTGGCTGTTA+AGG | + | chr8_1:73067737-73067756 | Msa1213050:intron | 45.0% | |
| !! | TAAGGGGAGTTTTGACCCAA+CGG | - | chr8_1:73067840-73067859 | None:intergenic | 45.0% |
| GCCCCAAAAACACTATAGCA+GGG | - | chr8_1:73067962-73067981 | None:intergenic | 45.0% | |
| AGCCCCAAAAACACTATAGC+AGG | - | chr8_1:73067963-73067982 | None:intergenic | 45.0% | |
| !!! | TGCTATAGTGTTTTTGGGGC+TGG | + | chr8_1:73067962-73067981 | Msa1213050:intron | 45.0% |
| CACATTTATCCAGCCAGGAT+TGG | + | chr8_1:73067993-73068012 | Msa1213050:intron | 45.0% | |
| GCTTCAAACACAGGTAGGAA+TGG | - | chr8_1:73068191-73068210 | None:intergenic | 45.0% | |
| ! | CATATAGGCGATTTGCTCAC+TGG | + | chr8_1:73068297-73068316 | Msa1213050:intron | 45.0% |
| TACCTATGCACAGAACTACC+CGG | + | chr8_1:73068509-73068528 | Msa1213050:intron | 45.0% | |
| ACAGAACTACCCGGAACAAA+TGG | + | chr8_1:73068518-73068537 | Msa1213050:intron | 45.0% | |
| CAGAACTACCCGGAACAAAT+GGG | + | chr8_1:73068519-73068538 | Msa1213050:intron | 45.0% | |
| TTTGGACTCCCATTTGTTCC+GGG | - | chr8_1:73068530-73068549 | None:intergenic | 45.0% | |
| ATAGCACAAACCTGGTGACA+TGG | - | chr8_1:73068767-73068786 | None:intergenic | 45.0% | |
| TCACCAGGTTTGTGCTATCA+TGG | + | chr8_1:73068769-73068788 | Msa1213050:intron | 45.0% | |
| CACCAGGTTTGTGCTATCAT+GGG | + | chr8_1:73068770-73068789 | Msa1213050:intron | 45.0% | |
| ATCCCATGATAGCACAAACC+TGG | - | chr8_1:73068775-73068794 | None:intergenic | 45.0% | |
| ATTTCAAAGTCTCTCCACGG+TGG | + | chr8_1:73069095-73069114 | Msa1213050:three_prime_UTR | 45.0% | |
| AAACTCTTGCGCGAAGAATC+AGG | - | chr8_1:73069206-73069225 | None:intergenic | 45.0% | |
| TCGTGCACTGTTCAATGTTC+AGG | + | chr8_1:73069318-73069337 | Msa1213050:three_prime_UTR | 45.0% | |
| CGTGCACTGTTCAATGTTCA+GGG | + | chr8_1:73069319-73069338 | Msa1213050:three_prime_UTR | 45.0% | |
| CGATGCGAATGGAATGGAGA+TGG | - | chr8_1:73065230-73065249 | None:intergenic | 50.0% | |
| CTTCTGCAATAGGGAGGATG+GGG | - | chr8_1:73065279-73065298 | None:intergenic | 50.0% | |
| GCTTCTGCAATAGGGAGGAT+GGG | - | chr8_1:73065280-73065299 | None:intergenic | 50.0% | |
| AGCTTCTGCAATAGGGAGGA+TGG | - | chr8_1:73065281-73065300 | None:intergenic | 50.0% | |
| ! | AAAGCGCCATGGGAGATAAC+AGG | + | chr8_1:73065314-73065333 | Msa1213050:CDS | 50.0% |
| TTGAATTCGGGGTGGGAAAC+GGG | - | chr8_1:73065341-73065360 | None:intergenic | 50.0% | |
| !!! | CTTTTTCCTTGGTAGTGGCG+GGG | - | chr8_1:73065403-73065422 | None:intergenic | 50.0% |
| !!! | GCTTTTTCCTTGGTAGTGGC+GGG | - | chr8_1:73065404-73065423 | None:intergenic | 50.0% |
| !!! | CGCTTTTTCCTTGGTAGTGG+CGG | - | chr8_1:73065405-73065424 | None:intergenic | 50.0% |
| ! | ACGGTTTCTGGATCGGAAGT+TGG | - | chr8_1:73065434-73065453 | None:intergenic | 50.0% |
| TAGATGGTGCGAACAATGGG+AGG | - | chr8_1:73065500-73065519 | None:intergenic | 50.0% | |
| GAGGATATGAATGCTCGTGG+CGG | + | chr8_1:73065608-73065627 | Msa1213050:CDS | 50.0% | |
| GGCGGTGGTTACCAATCTTA+AGG | + | chr8_1:73065626-73065645 | Msa1213050:CDS | 50.0% | |
| TTCTGGACCCCATACTTGAG+TGG | - | chr8_1:73067095-73067114 | None:intergenic | 50.0% | |
| TGATCCCCATTCCTGCAGTT+GGG | - | chr8_1:73067139-73067158 | None:intergenic | 50.0% | |
| TGCAGGAATGGGGATCAGAT+GGG | + | chr8_1:73067142-73067161 | Msa1213050:intron | 50.0% | |
| TGGTTGTGACAGAGATGAGG+TGG | - | chr8_1:73067585-73067604 | None:intergenic | 50.0% | |
| CTGTCGCTCAGTTGTTCTGT+TGG | - | chr8_1:73067609-73067628 | None:intergenic | 50.0% | |
| CTTCTGCCATGGAGAGTTCT+TGG | + | chr8_1:73067728-73067747 | Msa1213050:intron | 50.0% | |
| !! | GAGTTTTGACCCAACGGTTG+TGG | - | chr8_1:73067834-73067853 | None:intergenic | 50.0% |
| CTCTGCACATTTATCCAGCC+AGG | + | chr8_1:73067988-73068007 | Msa1213050:intron | 50.0% | |
| ! | TTCCGGGTAGTTCTGTGCAT+AGG | - | chr8_1:73068514-73068533 | None:intergenic | 50.0% |
| ACGGGTCCTGTTATCTCCCA+TGG | - | chr8_1:73065323-73065342 | None:intergenic | 55.0% | |
| ! | GGCGGATTTGAATTCGGGGT+GGG | - | chr8_1:73065348-73065367 | None:intergenic | 55.0% |
| ! | AGGCGGATTTGAATTCGGGG+TGG | - | chr8_1:73065349-73065368 | None:intergenic | 55.0% |
| GTAATCGAGTGCTCCGGGTA+AGG | - | chr8_1:73065369-73065388 | None:intergenic | 55.0% | |
| !! | TTGGTAGTGGCGGGGCAATA+GGG | - | chr8_1:73065395-73065414 | None:intergenic | 55.0% |
| GAACAATGGGAGGACGGTTG+CGG | - | chr8_1:73065490-73065509 | None:intergenic | 55.0% | |
| TGGTGCGAACAATGGGAGGA+CGG | - | chr8_1:73065496-73065515 | None:intergenic | 55.0% | |
| GATATGAATGCTCGTGGCGG+TGG | + | chr8_1:73065611-73065630 | Msa1213050:CDS | 55.0% | |
| TGTGGGTAAGAGAGCGGGTA+TGG | + | chr8_1:73067047-73067066 | Msa1213050:intron | 55.0% | |
| CTGATCCCCATTCCTGCAGT+TGG | - | chr8_1:73067140-73067159 | None:intergenic | 55.0% | |
| CTGCAGGAATGGGGATCAGA+TGG | + | chr8_1:73067141-73067160 | Msa1213050:intron | 55.0% | |
| GGGTGGTTGTGACAGAGATG+AGG | - | chr8_1:73067588-73067607 | None:intergenic | 55.0% | |
| CGCTCAGTTGTTCTGTTGGG+TGG | - | chr8_1:73067605-73067624 | None:intergenic | 55.0% | |
| TAGGCAGCAACCACAACCGT+TGG | + | chr8_1:73067821-73067840 | Msa1213050:intron | 55.0% | |
| AGGCAGCAACCACAACCGTT+GGG | + | chr8_1:73067822-73067841 | Msa1213050:intron | 55.0% | |
| CTTTAGCTGCCAATCCTGGC+TGG | - | chr8_1:73068005-73068024 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGTTTAGCCACCG+TGG | - | chr8_1:73069112-73069131 | None:intergenic | 55.0% |
| GGAGGATGGGGATTTCGCCA+TGG | - | chr8_1:73065267-73065286 | None:intergenic | 60.0% | |
| ATCGAGTGCTCCGGGTAAGG+CGG | - | chr8_1:73065366-73065385 | None:intergenic | 60.0% | |
| GGACGGTAATCGAGTGCTCC+GGG | - | chr8_1:73065374-73065393 | None:intergenic | 60.0% | |
| GGGACGGTAATCGAGTGCTC+CGG | - | chr8_1:73065375-73065394 | None:intergenic | 60.0% | |
| ! | TAGTGGCGGGGCAATAGGGA+CGG | - | chr8_1:73065391-73065410 | None:intergenic | 60.0% |
| !! | CTTGGTAGTGGCGGGGCAAT+AGG | - | chr8_1:73065396-73065415 | None:intergenic | 60.0% |
| CTATTGCCCCGCCACTACCA+AGG | + | chr8_1:73065394-73065413 | Msa1213050:CDS | 60.0% | |
| !! | ACGGTTGCGGCGTTGATCAC+GGG | - | chr8_1:73065477-73065496 | None:intergenic | 60.0% |
| !! | GACGGTTGCGGCGTTGATCA+CGG | - | chr8_1:73065478-73065497 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73065197 | 73069367 | 73065197 | ID=Msa1213050;Name=Msa1213050 |
| chr8_1 | mRNA | 73065197 | 73069367 | 73065197 | ID=Msa1213050-mRNA-1;Parent=Msa1213050;Name=Msa1213050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=69|0|0.5|1|0|0.5|2|592|126 |
| chr8_1 | exon | 73065197 | 73065646 | 73065197 | ID=Msa1213050-mRNA-1:exon:24726;Parent=Msa1213050-mRNA-1 |
| chr8_1 | exon | 73068776 | 73069367 | 73068776 | ID=Msa1213050-mRNA-1:exon:24727;Parent=Msa1213050-mRNA-1 |
| chr8_1 | five_prime_UTR | 73065197 | 73065265 | 73065197 | ID=Msa1213050-mRNA-1:five_prime_utr;Parent=Msa1213050-mRNA-1 |
| chr8_1 | CDS | 73065266 | 73065646 | 73065266 | ID=Msa1213050-mRNA-1:cds;Parent=Msa1213050-mRNA-1 |
| chr8_1 | three_prime_UTR | 73068776 | 73069367 | 73068776 | ID=Msa1213050-mRNA-1:three_prime_utr;Parent=Msa1213050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
