Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260230 | XP_013458006.1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 3.89e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260230 | I3SNP1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 1.86e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0639670 | Msa1260230 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa1260230 | Msa1300110 | 0.874635 | 5.788453e-68 | -8.615850e-47 |
| Msa1213050 | Msa1260230 | 0.839121 | 1.915190e-57 | -8.615850e-47 |
| Msa0881210 | Msa1260230 | 0.844496 | 7.292741e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260230 | MtrunA17_Chr4g0061551 | 97.561 | 123 | 3 | 0 | 1 | 123 | 1 | 123 | 2.54e-86 | 248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1260230 | AT5G08060.1 | 53.846 | 130 | 55 | 2 | 1 | 125 | 1 | 130 | 1.32e-46 | 147 |
Find 89 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATCGTAAACGGTTTC+TGG | 0.123041 | 8_2:-62080004 | None:intergenic |
| ACCATGCAGCATCTACATTT+TGG | 0.215272 | 8_2:+62083373 | Msa1260230:three_prime_UTR |
| CTTGAAATTCCCTGTTTGTT+TGG | 0.223107 | 8_2:+62083291 | Msa1260230:three_prime_UTR |
| TAATAAGGCAAATTACTTTC+TGG | 0.234318 | 8_2:-62083210 | None:intergenic |
| ATCCTCTTCAACAATAATAT+TGG | 0.235925 | 8_2:-62080152 | None:intergenic |
| CAATGTTCAGGGTATTATTA+AGG | 0.249157 | 8_2:+62083574 | Msa1260230:three_prime_UTR |
| CTTGGTAGTGGCGGGGCAAT+AGG | 0.256934 | 8_2:-62079954 | None:intergenic |
| CGTTTAAAATAGACAATTAC+AGG | 0.283108 | 8_2:-62083104 | None:intergenic |
| TCGTGCACTGTTCAATGTTC+AGG | 0.301853 | 8_2:+62083562 | Msa1260230:three_prime_UTR |
| CAACTTTCTGCCTTTGTCAA+TGG | 0.313049 | 8_2:+62083055 | Msa1260230:three_prime_UTR |
| GGTAAGGCGGATTTGAATTC+GGG | 0.330486 | 8_2:-62079911 | None:intergenic |
| GGGTAAGGCGGATTTGAATT+CGG | 0.340087 | 8_2:-62079912 | None:intergenic |
| CACTCATAATCCAAACAAAC+AGG | 0.350183 | 8_2:-62083301 | None:intergenic |
| ATCAATAATAAAAGGTTGTT+AGG | 0.354639 | 8_2:+62083143 | Msa1260230:three_prime_UTR |
| TTGAATTCGGGGTGGGAAAC+GGG | 0.360855 | 8_2:-62079899 | None:intergenic |
| TCCTCTTCAACAATAATATT+GGG | 0.376182 | 8_2:-62080151 | None:intergenic |
| AACTTTCTGCCTTTGTCAAT+GGG | 0.387535 | 8_2:+62083056 | Msa1260230:three_prime_UTR |
| TTTGAATTCGGGGTGGGAAA+CGG | 0.389873 | 8_2:-62079900 | None:intergenic |
| ACAATAATATTGGGATAAAT+CGG | 0.396910 | 8_2:-62080142 | None:intergenic |
| AAACTCTTGCGCGAAGAATC+AGG | 0.398005 | 8_2:-62083447 | None:intergenic |
| GATATCAGCTTTCTTGTAGA+TGG | 0.398615 | 8_2:-62080074 | None:intergenic |
| ATTAAGGACTCTTGTGTTGA+GGG | 0.420699 | 8_2:+62083590 | Msa1260230:three_prime_UTR |
| TCACCAGGTTTGTGCTATCA+TGG | 0.433416 | 8_2:+62083012 | Msa1260230:intron |
| GCTTTGAGAAAGTTTATTTG+TGG | 0.434917 | 8_2:+62083472 | Msa1260230:three_prime_UTR |
| ATAGTATTTGATATCGTAAA+CGG | 0.437783 | 8_2:-62080011 | None:intergenic |
| TTGTAGATGGTGCGAACAAT+GGG | 0.438576 | 8_2:-62080061 | None:intergenic |
| GGCGGTGGTTACCAATCTTA+AGG | 0.444855 | 8_2:+62080187 | Msa1260230:CDS |
| GACGGTTGCGGCGTTGATCA+CGG | 0.445310 | 8_2:-62080036 | None:intergenic |
| TTGGTAGTGGCGGGGCAATA+GGG | 0.455000 | 8_2:-62079953 | None:intergenic |
| AAAGCGCCATGGGAGATAAC+AGG | 0.462207 | 8_2:+62079875 | Msa1260230:CDS |
| TCCCAATATTATTGTTGAAG+AGG | 0.466589 | 8_2:+62080150 | Msa1260230:CDS |
| ACGGTTTCTGGATCGGAAGT+TGG | 0.480049 | 8_2:-62079992 | None:intergenic |
| ATCGTAAACGGTTTCTGGAT+CGG | 0.484413 | 8_2:-62079999 | None:intergenic |
| AGCTTCTGCAATAGGGAGGA+TGG | 0.485294 | 8_2:-62079839 | None:intergenic |
| CTTGTAGATGGTGCGAACAA+TGG | 0.486997 | 8_2:-62080062 | None:intergenic |
| ACGGTTGCGGCGTTGATCAC+GGG | 0.489099 | 8_2:-62080035 | None:intergenic |
| GAACAATGGGAGGACGGTTG+CGG | 0.493599 | 8_2:-62080048 | None:intergenic |
| AACATAAATTTAGAAGAATG+AGG | 0.496414 | 8_2:-62083518 | None:intergenic |
| GCGTACTTATTTGTGTTCAT+CGG | 0.498339 | 8_2:+62083186 | Msa1260230:three_prime_UTR |
| TTCTGCCTTTGTCAATGGGA+AGG | 0.498576 | 8_2:+62083060 | Msa1260230:three_prime_UTR |
| CGATGCGAATGGAATGGAGA+TGG | 0.500990 | 8_2:-62079788 | None:intergenic |
| TGAGAAAGTTTATTTGTGGA+TGG | 0.502712 | 8_2:+62083476 | Msa1260230:three_prime_UTR |
| CGTGCACTGTTCAATGTTCA+GGG | 0.512982 | 8_2:+62083563 | Msa1260230:three_prime_UTR |
| GATGCGAATGGAATGGAGAT+GGG | 0.515301 | 8_2:-62079787 | None:intergenic |
| GATATGAATGCTCGTGGCGG+TGG | 0.519485 | 8_2:+62080172 | Msa1260230:CDS |
| GTAATCGAGTGCTCCGGGTA+AGG | 0.522391 | 8_2:-62079927 | None:intergenic |
| TATTAAGGACTCTTGTGTTG+AGG | 0.524851 | 8_2:+62083589 | Msa1260230:three_prime_UTR |
| CAAACAAACAGGGAATTTCA+AGG | 0.525732 | 8_2:-62083290 | None:intergenic |
| CACCAGGTTTGTGCTATCAT+GGG | 0.527775 | 8_2:+62083013 | Msa1260230:intron |
| GGGACGGTAATCGAGTGCTC+CGG | 0.539030 | 8_2:-62079933 | None:intergenic |
| GGACGGTAATCGAGTGCTCC+GGG | 0.539896 | 8_2:-62079932 | None:intergenic |
| GCTTCTGCAATAGGGAGGAT+GGG | 0.541038 | 8_2:-62079838 | None:intergenic |
| GACAAAGGCAGAAAGTTGAC+TGG | 0.541579 | 8_2:-62083050 | None:intergenic |
| GAATTCAAATCCGCCTTACC+CGG | 0.542162 | 8_2:+62079914 | Msa1260230:CDS |
| ACGGGTCCTGTTATCTCCCA+TGG | 0.545601 | 8_2:-62079881 | None:intergenic |
| GGCGGATTTGAATTCGGGGT+GGG | 0.546935 | 8_2:-62079906 | None:intergenic |
| AAGCTGATATCGAGAAACTC+AGG | 0.555463 | 8_2:+62080086 | Msa1260230:CDS |
| CTTCTGCAATAGGGAGGATG+GGG | 0.563958 | 8_2:-62079837 | None:intergenic |
| GATTCTCGATGCGAATGGAA+TGG | 0.571340 | 8_2:-62079794 | None:intergenic |
| TGCCTCATTGACTTGATATG+TGG | 0.574581 | 8_2:+62083252 | Msa1260230:three_prime_UTR |
| ATCGAGTGCTCCGGGTAAGG+CGG | 0.581020 | 8_2:-62079924 | None:intergenic |
| TTAAGGACTCTTGTGTTGAG+GGG | 0.596158 | 8_2:+62083591 | Msa1260230:three_prime_UTR |
| GGAGGATGGGGACTTCGCCA+TGG | 0.603194 | 8_2:-62079825 | None:intergenic |
| AAGCTTCATCAAAGCGCCAT+GGG | 0.605317 | 8_2:+62079865 | Msa1260230:CDS |
| TCAGACCTTCCCATTGACAA+AGG | 0.606581 | 8_2:-62083065 | None:intergenic |
| AAAGCTTCATCAAAGCGCCA+TGG | 0.606824 | 8_2:+62079864 | Msa1260230:CDS |
| CTATTGCCCCGCCACTACCA+AGG | 0.608087 | 8_2:+62079955 | Msa1260230:CDS |
| TGGTGCGAACAATGGGAGGA+CGG | 0.610543 | 8_2:-62080054 | None:intergenic |
| AGAAGAATGAGGCAACATAG+AGG | 0.614244 | 8_2:-62083507 | None:intergenic |
| AAATGTAGATGCTGCATGGT+TGG | 0.615620 | 8_2:-62083370 | None:intergenic |
| GTAAGGCGGATTTGAATTCG+GGG | 0.621827 | 8_2:-62079910 | None:intergenic |
| TTTCAGCTTCTGCAATAGGG+AGG | 0.622425 | 8_2:-62079843 | None:intergenic |
| TCCAAAATGTAGATGCTGCA+TGG | 0.623541 | 8_2:-62083374 | None:intergenic |
| GAATCAGATTGAAAATTGAA+CGG | 0.629176 | 8_2:-62079764 | None:intergenic |
| TAGTGGCGGGGCAATAGGGA+CGG | 0.630605 | 8_2:-62079949 | None:intergenic |
| ATGCGAATGGAATGGAGATG+GGG | 0.633055 | 8_2:-62079786 | None:intergenic |
| ACAAAGGCAGAAAGTTGACT+GGG | 0.636346 | 8_2:-62083049 | None:intergenic |
| TGATTGATTCTCGATGCGAA+TGG | 0.639448 | 8_2:-62079799 | None:intergenic |
| ATAATATTGGGATAAATCGG+AGG | 0.646994 | 8_2:-62080139 | None:intergenic |
| TAGATGGTGCGAACAATGGG+AGG | 0.648838 | 8_2:-62080058 | None:intergenic |
| GGTTGGTTGTTTAGCCACCG+TGG | 0.652043 | 8_2:-62083353 | None:intergenic |
| ATGATTTCAAAGTCTCTCCA+CGG | 0.660113 | 8_2:+62083336 | Msa1260230:three_prime_UTR |
| AGGCGGATTTGAATTCGGGG+TGG | 0.660754 | 8_2:-62079907 | None:intergenic |
| TCGAGAATCAATCACAACCA+TGG | 0.661556 | 8_2:+62079808 | Msa1260230:exon |
| TACCACATATCAAGTCAATG+AGG | 0.673357 | 8_2:-62083254 | None:intergenic |
| ACTCATAATCCAAACAAACA+GGG | 0.681538 | 8_2:-62083300 | None:intergenic |
| GAAGAGGATATGAATGCTCG+TGG | 0.716215 | 8_2:+62080166 | Msa1260230:CDS |
| ATTTCAAAGTCTCTCCACGG+TGG | 0.747531 | 8_2:+62083339 | Msa1260230:three_prime_UTR |
| GAGGATATGAATGCTCGTGG+CGG | 0.770619 | 8_2:+62080169 | Msa1260230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGGTATAAAAAATAATTAA+AGG | + | chr8_2:62082314-62082333 | Msa1260230:intron | 10.0% |
| !! | TTAGGAAAATAAAAATAAAA+AGG | + | chr8_2:62082559-62082578 | Msa1260230:intron | 10.0% |
| !!! | TTTTTACTTTATTTTCTTGA+GGG | - | chr8_2:62080523-62080542 | None:intergenic | 15.0% |
| !!! | ATTTTTACTTTATTTTCTTG+AGG | - | chr8_2:62080524-62080543 | None:intergenic | 15.0% |
| !! | AGAAAATAAAGTAAAAATAG+CGG | + | chr8_2:62080526-62080545 | Msa1260230:intron | 15.0% |
| !! | GTGATTTAAAGAAATTTAAA+TGG | + | chr8_2:62081206-62081225 | Msa1260230:intron | 15.0% |
| !! | GCCTATAATTATTAATATTT+GGG | + | chr8_2:62081486-62081505 | Msa1260230:intron | 15.0% |
| !! | TCCCAAATATTAATAATTAT+AGG | - | chr8_2:62081490-62081509 | None:intergenic | 15.0% |
| !!! | AGCTAAAGTTTAAAATATAT+TGG | + | chr8_2:62082248-62082267 | Msa1260230:intron | 15.0% |
| !!! | TTTTTTCTACTTCATTATTA+TGG | + | chr8_2:62082279-62082298 | Msa1260230:intron | 15.0% |
| !! | AATATAGTATGCTATAAATT+TGG | - | chr8_2:62082779-62082798 | None:intergenic | 15.0% |
| !!! | CATTTTGTATCAATAATAAA+AGG | + | chr8_2:62083135-62083154 | Msa1260230:three_prime_UTR | 15.0% |
| !! | TTGTTAAAAAGTCAATAATA+AGG | - | chr8_2:62083228-62083247 | None:intergenic | 15.0% |
| !! | ATAGTATTTGATATCGTAAA+CGG | - | chr8_2:62080014-62080033 | None:intergenic | 20.0% |
| !! | ACAATAATATTGGGATAAAT+CGG | - | chr8_2:62080145-62080164 | None:intergenic | 20.0% |
| !! | AAACATGAGAATTAATATGA+AGG | - | chr8_2:62080223-62080242 | None:intergenic | 20.0% |
| !!! | TTGTTGATGATTAATTGATT+AGG | + | chr8_2:62080243-62080262 | Msa1260230:intron | 20.0% |
| !!! | TGTTGATGATTAATTGATTA+GGG | + | chr8_2:62080244-62080263 | Msa1260230:intron | 20.0% |
| !!! | TTTCTAAAATTCTGAAAAAG+AGG | + | chr8_2:62080607-62080626 | Msa1260230:intron | 20.0% |
| !!! | TTCTAAAATTCTGAAAAAGA+GGG | + | chr8_2:62080608-62080627 | Msa1260230:intron | 20.0% |
| !! | CATTCAATAAATGATGTATT+TGG | + | chr8_2:62081030-62081049 | Msa1260230:intron | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+TGG | - | chr8_2:62081005-62081024 | None:intergenic | 20.0% |
| !! | GGCCTATAATTATTAATATT+TGG | + | chr8_2:62081485-62081504 | Msa1260230:intron | 20.0% |
| !!! | TAGTTCAATGGAAAATTTTA+AGG | - | chr8_2:62081561-62081580 | None:intergenic | 20.0% |
| !! | ATCAAATGTTTATAGTTCAA+TGG | - | chr8_2:62081573-62081592 | None:intergenic | 20.0% |
| !!! | AGTTTAAAATATATTGGTGT+TGG | + | chr8_2:62082254-62082273 | Msa1260230:intron | 20.0% |
| !!! | ATTATGGTTTGATGTTATTT+TGG | + | chr8_2:62082295-62082314 | Msa1260230:intron | 20.0% |
| !!! | TAATATCATGTTTTTCTGTT+TGG | + | chr8_2:62082678-62082697 | Msa1260230:intron | 20.0% |
| !!! | TATATAAATTGATCTGGAAT+TGG | - | chr8_2:62082879-62082898 | None:intergenic | 20.0% |
| !! | AAAGTGTATATAAATTGATC+TGG | - | chr8_2:62082885-62082904 | None:intergenic | 20.0% |
| !!! | CTGTAATTGTCTATTTTAAA+CGG | + | chr8_2:62083105-62083124 | Msa1260230:three_prime_UTR | 20.0% |
| !! | ATCAATAATAAAAGGTTGTT+AGG | + | chr8_2:62083143-62083162 | Msa1260230:three_prime_UTR | 20.0% |
| !!! | AATGAATCCTCATTTTTTTT+AGG | + | chr8_2:62083397-62083416 | Msa1260230:three_prime_UTR | 20.0% |
| !! | AAAATTGCCTAAAAAAAATG+AGG | - | chr8_2:62083407-62083426 | None:intergenic | 20.0% |
| !! | AACATAAATTTAGAAGAATG+AGG | - | chr8_2:62083521-62083540 | None:intergenic | 20.0% |
| ! | GAATCAGATTGAAAATTGAA+CGG | - | chr8_2:62079767-62079786 | None:intergenic | 25.0% |
| ! | TCCTCTTCAACAATAATATT+GGG | - | chr8_2:62080154-62080173 | None:intergenic | 25.0% |
| ! | ATCCTCTTCAACAATAATAT+TGG | - | chr8_2:62080155-62080174 | None:intergenic | 25.0% |
| !!! | AGTTCCAACAATTTTTTATC+TGG | + | chr8_2:62080384-62080403 | Msa1260230:intron | 25.0% |
| ! | GTATCCAGATAAAAAATTGT+TGG | - | chr8_2:62080391-62080410 | None:intergenic | 25.0% |
| !! | CCAGATTATCAATTTTCAAA+AGG | - | chr8_2:62080440-62080459 | None:intergenic | 25.0% |
| !!! | CCTTTTGAAAATTGATAATC+TGG | + | chr8_2:62080437-62080456 | Msa1260230:intron | 25.0% |
| ! | AAAAAAAGTCCTTCTAATCA+TGG | - | chr8_2:62080497-62080516 | None:intergenic | 25.0% |
| !! | TAAAAATAGCGGAGTAAAAT+AGG | + | chr8_2:62080537-62080556 | Msa1260230:intron | 25.0% |
| !! | AAAAATAGCGGAGTAAAATA+GGG | + | chr8_2:62080538-62080557 | Msa1260230:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_2:62081103-62081122 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_2:62081103-62081122 | Msa1260230:intron | 25.0% |
| ! | AAATACTTGTATCTAGATTC+TGG | - | chr8_2:62081350-62081369 | None:intergenic | 25.0% |
| ! | TCATGTTAAAAAGAGAGATA+CGG | + | chr8_2:62081529-62081548 | Msa1260230:intron | 25.0% |
| ! | AACAACACAGATGAAAATTT+GGG | + | chr8_2:62081629-62081648 | Msa1260230:intron | 25.0% |
| ! | TATGAATAGAGTCTTAAAGA+AGG | - | chr8_2:62081686-62081705 | None:intergenic | 25.0% |
| ! | AAAAATCGTAGTCTAGATAA+GGG | - | chr8_2:62082088-62082107 | None:intergenic | 25.0% |
| ! | GACACAATTTCATTTCATAT+AGG | + | chr8_2:62082513-62082532 | Msa1260230:intron | 25.0% |
| ! | AAAAAATTGCTTACAGCATA+GGG | - | chr8_2:62082642-62082661 | None:intergenic | 25.0% |
| ! | TAAAAAATTGCTTACAGCAT+AGG | - | chr8_2:62082643-62082662 | None:intergenic | 25.0% |
| !! | CGTTTAAAATAGACAATTAC+AGG | - | chr8_2:62083107-62083126 | None:intergenic | 25.0% |
| ! | TAATAAGGCAAATTACTTTC+TGG | - | chr8_2:62083213-62083232 | None:intergenic | 25.0% |
| ATAATATTGGGATAAATCGG+AGG | - | chr8_2:62080142-62080161 | None:intergenic | 30.0% | |
| TCCCAATATTATTGTTGAAG+AGG | + | chr8_2:62080150-62080169 | Msa1260230:CDS | 30.0% | |
| GAAAAATGTGACCTTAAGAT+TGG | - | chr8_2:62080201-62080220 | None:intergenic | 30.0% | |
| ! | GGATTTGTTTAATTGCTCTA+TGG | + | chr8_2:62080265-62080284 | Msa1260230:intron | 30.0% |
| TCATACAACAAGTTACTAGA+CGG | - | chr8_2:62080296-62080315 | None:intergenic | 30.0% | |
| ! | AATTGATAATCTGGAACATG+CGG | + | chr8_2:62080446-62080465 | Msa1260230:intron | 30.0% |
| ! | AAAATAGCGGAGTAAAATAG+GGG | + | chr8_2:62080539-62080558 | Msa1260230:intron | 30.0% |
| TTAGAAAAACATCACTGTTG+CGG | - | chr8_2:62080594-62080613 | None:intergenic | 30.0% | |
| ATTATAATAACTACTCCCTC+CGG | + | chr8_2:62080973-62080992 | Msa1260230:intron | 30.0% | |
| ATTTCTCGTAGTTATAGTGT+GGG | + | chr8_2:62081268-62081287 | Msa1260230:intron | 30.0% | |
| TTGTATATTCACACCCAAAT+AGG | + | chr8_2:62081598-62081617 | Msa1260230:intron | 30.0% | |
| TTGTTCTTCTAGTCCTATTT+GGG | - | chr8_2:62081614-62081633 | None:intergenic | 30.0% | |
| GAACAACACAGATGAAAATT+TGG | + | chr8_2:62081628-62081647 | Msa1260230:intron | 30.0% | |
| GCTAAAGAAACAGATGATTT+GGG | - | chr8_2:62081744-62081763 | None:intergenic | 30.0% | |
| AGCTAAAGAAACAGATGATT+TGG | - | chr8_2:62081745-62081764 | None:intergenic | 30.0% | |
| CATTACCTTTCATTTCTAAG+AGG | + | chr8_2:62082024-62082043 | Msa1260230:intron | 30.0% | |
| ! | ATTAGCCTCTTAGAAATGAA+AGG | - | chr8_2:62082032-62082051 | None:intergenic | 30.0% |
| ! | TCATTTCTAAGAGGCTAATT+AGG | + | chr8_2:62082033-62082052 | Msa1260230:intron | 30.0% |
| AAAATCGTAGTCTAGATAAG+GGG | - | chr8_2:62082087-62082106 | None:intergenic | 30.0% | |
| CAAAAATCGTAGTCTAGATA+AGG | - | chr8_2:62082089-62082108 | None:intergenic | 30.0% | |
| ! | CTTATCTAGACTACGATTTT+TGG | + | chr8_2:62082087-62082106 | Msa1260230:intron | 30.0% |
| TGATGATATGTCTTCAATTC+TGG | + | chr8_2:62082117-62082136 | Msa1260230:intron | 30.0% | |
| ATAGTAGTATGAAGATACAC+TGG | + | chr8_2:62082392-62082411 | Msa1260230:intron | 30.0% | |
| AAATGAAATTGTGTCCAAAC+AGG | - | chr8_2:62082508-62082527 | None:intergenic | 30.0% | |
| !!! | TGCTGTAAGCAATTTTTTAG+AGG | + | chr8_2:62082644-62082663 | Msa1260230:intron | 30.0% |
| ACTCATAATCCAAACAAACA+GGG | - | chr8_2:62083303-62083322 | None:intergenic | 30.0% | |
| !! | GCTTTGAGAAAGTTTATTTG+TGG | + | chr8_2:62083472-62083491 | Msa1260230:three_prime_UTR | 30.0% |
| TGAGAAAGTTTATTTGTGGA+TGG | + | chr8_2:62083476-62083495 | Msa1260230:three_prime_UTR | 30.0% | |
| ! | CAATGTTCAGGGTATTATTA+AGG | + | chr8_2:62083574-62083593 | Msa1260230:three_prime_UTR | 30.0% |
| !!! | TGGAATAATCGCTTTTTCCT+TGG | - | chr8_2:62079975-62079994 | None:intergenic | 35.0% |
| TTGATATCGTAAACGGTTTC+TGG | - | chr8_2:62080007-62080026 | None:intergenic | 35.0% | |
| GATATCAGCTTTCTTGTAGA+TGG | - | chr8_2:62080077-62080096 | None:intergenic | 35.0% | |
| GAGCAGATGAAATGCATAAT+AGG | + | chr8_2:62080357-62080376 | Msa1260230:intron | 35.0% | |
| TGATGTTAGTCCATAAGAGT+AGG | + | chr8_2:62080411-62080430 | Msa1260230:intron | 35.0% | |
| GATGTTAGTCCATAAGAGTA+GGG | + | chr8_2:62080412-62080431 | Msa1260230:intron | 35.0% | |
| ! | ATTGATAATCTGGAACATGC+GGG | + | chr8_2:62080447-62080466 | Msa1260230:intron | 35.0% |
| TTGTTGACACCATGATTAGA+AGG | + | chr8_2:62080485-62080504 | Msa1260230:intron | 35.0% | |
| ATTGAGTTCAGACGCAATAT+GGG | - | chr8_2:62080565-62080584 | None:intergenic | 35.0% | |
| ! | TTCTGAAAAAGAGGGAAATC+TGG | + | chr8_2:62080616-62080635 | Msa1260230:intron | 35.0% |
| GATTTCTCGTAGTTATAGTG+TGG | + | chr8_2:62081267-62081286 | Msa1260230:intron | 35.0% | |
| AGTTGTTATCCACTCAAGTA+TGG | + | chr8_2:62081321-62081340 | Msa1260230:intron | 35.0% | |
| GTTGTTATCCACTCAAGTAT+GGG | + | chr8_2:62081322-62081341 | Msa1260230:intron | 35.0% | |
| TTGTTATCCACTCAAGTATG+GGG | + | chr8_2:62081323-62081342 | Msa1260230:intron | 35.0% | |
| !!! | AGTATTTTTTTCCCAACTGC+AGG | + | chr8_2:62081363-62081382 | Msa1260230:intron | 35.0% |
| GTTGACAATAGGTAAGGTAT+GGG | - | chr8_2:62081421-62081440 | None:intergenic | 35.0% | |
| ATATGGATGAGGTTGACAAT+AGG | - | chr8_2:62081432-62081451 | None:intergenic | 35.0% | |
| GTTGTTCTTCTAGTCCTATT+TGG | - | chr8_2:62081615-62081634 | None:intergenic | 35.0% | |
| ! | AATCAGCACAACGCATTTTT+CGG | + | chr8_2:62081655-62081674 | Msa1260230:intron | 35.0% |
| TAATTCATACCGACAAACAC+AGG | + | chr8_2:62081704-62081723 | Msa1260230:intron | 35.0% | |
| ! | AAACACAGGTAAACCCTTTT+GGG | + | chr8_2:62081718-62081737 | Msa1260230:intron | 35.0% |
| AATGAGAAGAGACAAAACAG+AGG | - | chr8_2:62081777-62081796 | None:intergenic | 35.0% | |
| TAACGTTTGAACCCATTTGT+AGG | + | chr8_2:62081998-62082017 | Msa1260230:intron | 35.0% | |
| ! | AGGTTGTCATTCAGAGTATT+TGG | + | chr8_2:62082334-62082353 | Msa1260230:intron | 35.0% |
| AAATAGCTTCAAACACAGGT+AGG | - | chr8_2:62082427-62082446 | None:intergenic | 35.0% | |
| TGTGTTATCCTAATCCTGTT+TGG | + | chr8_2:62082491-62082510 | Msa1260230:intron | 35.0% | |
| AATTGTGTCCAAACAGGATT+AGG | - | chr8_2:62082502-62082521 | None:intergenic | 35.0% | |
| ! | TGCTCACTGGTTAGTTATTT+AGG | + | chr8_2:62082541-62082560 | Msa1260230:intron | 35.0% |
| ! | GATGCTAAATTTTGCAACTG+CGG | + | chr8_2:62082581-62082600 | Msa1260230:intron | 35.0% |
| GGACACAATCTCGATATATT+AGG | + | chr8_2:62082699-62082718 | Msa1260230:intron | 35.0% | |
| !!! | AATTTTGTGAGCACTGAAAC+AGG | - | chr8_2:62082910-62082929 | None:intergenic | 35.0% |
| AACTTTCTGCCTTTGTCAAT+GGG | + | chr8_2:62083056-62083075 | Msa1260230:three_prime_UTR | 35.0% | |
| GCGTACTTATTTGTGTTCAT+CGG | + | chr8_2:62083186-62083205 | Msa1260230:three_prime_UTR | 35.0% | |
| TACCACATATCAAGTCAATG+AGG | - | chr8_2:62083257-62083276 | None:intergenic | 35.0% | |
| CAAACAAACAGGGAATTTCA+AGG | - | chr8_2:62083293-62083312 | None:intergenic | 35.0% | |
| CTTGAAATTCCCTGTTTGTT+TGG | + | chr8_2:62083291-62083310 | Msa1260230:three_prime_UTR | 35.0% | |
| CACTCATAATCCAAACAAAC+AGG | - | chr8_2:62083304-62083323 | None:intergenic | 35.0% | |
| ATGATTTCAAAGTCTCTCCA+CGG | + | chr8_2:62083336-62083355 | Msa1260230:three_prime_UTR | 35.0% | |
| ! | TGATTGATTCTCGATGCGAA+TGG | - | chr8_2:62079802-62079821 | None:intergenic | 40.0% |
| TCGAGAATCAATCACAACCA+TGG | + | chr8_2:62079808-62079827 | Msa1260230:exon | 40.0% | |
| ! | GCTTTTCAGCTTCTGCAATA+GGG | - | chr8_2:62079849-62079868 | None:intergenic | 40.0% |
| ! | AGCTTTTCAGCTTCTGCAAT+AGG | - | chr8_2:62079850-62079869 | None:intergenic | 40.0% |
| !!! | AATCGCTTTTTCCTTGGTAG+TGG | - | chr8_2:62079969-62079988 | None:intergenic | 40.0% |
| ! | ATCGTAAACGGTTTCTGGAT+CGG | - | chr8_2:62080002-62080021 | None:intergenic | 40.0% |
| TTGTAGATGGTGCGAACAAT+GGG | - | chr8_2:62080064-62080083 | None:intergenic | 40.0% | |
| AAGCTGATATCGAGAAACTC+AGG | + | chr8_2:62080086-62080105 | Msa1260230:CDS | 40.0% | |
| CAAAAGGAACCCTACTCTTA+TGG | - | chr8_2:62080424-62080443 | None:intergenic | 40.0% | |
| GAACATGCGGGAAAAATCAT+TGG | + | chr8_2:62080459-62080478 | Msa1260230:intron | 40.0% | |
| GATTGAGTTCAGACGCAATA+TGG | - | chr8_2:62080566-62080585 | None:intergenic | 40.0% | |
| TAGAAGAAGAGTCACAGTAG+TGG | + | chr8_2:62080691-62080710 | Msa1260230:intron | 40.0% | |
| AGAAGTGACGAGTTAAGTAG+AGG | + | chr8_2:62080771-62080790 | Msa1260230:intron | 40.0% | |
| TAGTAGAAGAGTCACAGTAG+AGG | + | chr8_2:62080872-62080891 | Msa1260230:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_2:62081107-62081126 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_2:62081106-62081125 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_2:62081106-62081125 | Msa1260230:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_2:62081107-62081126 | Msa1260230:intron | 40.0% | |
| TCTCAAATAAGTACTCCCTC+CGG | - | chr8_2:62081125-62081144 | None:intergenic | 40.0% | |
| TTATAGTGTGGGTAAGAGAG+CGG | + | chr8_2:62081279-62081298 | Msa1260230:intron | 40.0% | |
| !!! | TTTTTTCCCAACTGCAGGAA+TGG | + | chr8_2:62081368-62081387 | Msa1260230:intron | 40.0% |
| ! | TTTTTCCCAACTGCAGGAAT+GGG | + | chr8_2:62081369-62081388 | Msa1260230:intron | 40.0% |
| CAATAGGTAAGGTATGGGTA+GGG | - | chr8_2:62081416-62081435 | None:intergenic | 40.0% | |
| ACAATAGGTAAGGTATGGGT+AGG | - | chr8_2:62081417-62081436 | None:intergenic | 40.0% | |
| GGTTGACAATAGGTAAGGTA+TGG | - | chr8_2:62081422-62081441 | None:intergenic | 40.0% | |
| GATGAGGTTGACAATAGGTA+AGG | - | chr8_2:62081427-62081446 | None:intergenic | 40.0% | |
| GTCAACCTCATCCATATACA+CGG | + | chr8_2:62081435-62081454 | Msa1260230:intron | 40.0% | |
| TATAGCCGTGTATATGGATG+AGG | - | chr8_2:62081443-62081462 | None:intergenic | 40.0% | |
| GCTATACCTTGCAAAAACAC+AGG | + | chr8_2:62081457-62081476 | Msa1260230:intron | 40.0% | |
| !! | CATTGACCTGTGTTTTTGCA+AGG | - | chr8_2:62081466-62081485 | None:intergenic | 40.0% |
| CTTGCAAAAACACAGGTCAA+TGG | + | chr8_2:62081464-62081483 | Msa1260230:intron | 40.0% | |
| TGGGAGAATGATGAATGATG+TGG | + | chr8_2:62081505-62081524 | Msa1260230:intron | 40.0% | |
| AAGGGTTTACCTGTGTTTGT+CGG | - | chr8_2:62081716-62081735 | None:intergenic | 40.0% | |
| ! | CAAACACAGGTAAACCCTTT+TGG | + | chr8_2:62081717-62081736 | Msa1260230:intron | 40.0% |
| GTGATAGAAAACTTCTGCCA+TGG | + | chr8_2:62081955-62081974 | Msa1260230:intron | 40.0% | |
| AGGTAATGCTGCCTACAAAT+GGG | - | chr8_2:62082012-62082031 | None:intergenic | 40.0% | |
| AAGGTAATGCTGCCTACAAA+TGG | - | chr8_2:62082013-62082032 | None:intergenic | 40.0% | |
| ! | TCACCCTGCTATAGTGTTTT+TGG | + | chr8_2:62082187-62082206 | Msa1260230:intron | 40.0% |
| ! | CACCCTGCTATAGTGTTTTT+GGG | + | chr8_2:62082188-62082207 | Msa1260230:intron | 40.0% |
| !! | ACCCTGCTATAGTGTTTTTG+GGG | + | chr8_2:62082189-62082208 | Msa1260230:intron | 40.0% |
| TAAACTTTAGCTGCCAATCC+TGG | - | chr8_2:62082240-62082259 | None:intergenic | 40.0% | |
| CAGCAAATAGCTTCAAACAC+AGG | - | chr8_2:62082431-62082450 | None:intergenic | 40.0% | |
| ! | GTGTTTGAAGCTATTTGCTG+AGG | + | chr8_2:62082431-62082450 | Msa1260230:intron | 40.0% |
| ATTAGGCCAAATTGCTCACT+TGG | + | chr8_2:62082716-62082735 | Msa1260230:intron | 40.0% | |
| AGGTAACCAAGTGAGCAATT+TGG | - | chr8_2:62082725-62082744 | None:intergenic | 40.0% | |
| TACCTATGCACAGAACTACT+CGG | + | chr8_2:62082740-62082759 | Msa1260230:intron | 40.0% | |
| ACAGAACTACTCGGAACAAA+TGG | + | chr8_2:62082749-62082768 | Msa1260230:intron | 40.0% | |
| CAGAACTACTCGGAACAAAT+GGG | + | chr8_2:62082750-62082769 | Msa1260230:intron | 40.0% | |
| AAATGTCTTTGCATGTCACC+AGG | + | chr8_2:62082997-62083016 | Msa1260230:intron | 40.0% | |
| ACAAAGGCAGAAAGTTGACT+GGG | - | chr8_2:62083052-62083071 | None:intergenic | 40.0% | |
| CAACTTTCTGCCTTTGTCAA+TGG | + | chr8_2:62083055-62083074 | Msa1260230:three_prime_UTR | 40.0% | |
| !! | TGCCTCATTGACTTGATATG+TGG | + | chr8_2:62083252-62083271 | Msa1260230:three_prime_UTR | 40.0% |
| AAATGTAGATGCTGCATGGT+TGG | - | chr8_2:62083373-62083392 | None:intergenic | 40.0% | |
| ! | ACCATGCAGCATCTACATTT+TGG | + | chr8_2:62083373-62083392 | Msa1260230:three_prime_UTR | 40.0% |
| TCCAAAATGTAGATGCTGCA+TGG | - | chr8_2:62083377-62083396 | None:intergenic | 40.0% | |
| AGAAGAATGAGGCAACATAG+AGG | - | chr8_2:62083510-62083529 | None:intergenic | 40.0% | |
| ATGCGAATGGAATGGAGATG+GGG | - | chr8_2:62079789-62079808 | None:intergenic | 45.0% | |
| GATGCGAATGGAATGGAGAT+GGG | - | chr8_2:62079790-62079809 | None:intergenic | 45.0% | |
| GATTCTCGATGCGAATGGAA+TGG | - | chr8_2:62079797-62079816 | None:intergenic | 45.0% | |
| TTTCAGCTTCTGCAATAGGG+AGG | - | chr8_2:62079846-62079865 | None:intergenic | 45.0% | |
| ! | AAAGCTTCATCAAAGCGCCA+TGG | + | chr8_2:62079864-62079883 | Msa1260230:CDS | 45.0% |
| ! | AAGCTTCATCAAAGCGCCAT+GGG | + | chr8_2:62079865-62079884 | Msa1260230:CDS | 45.0% |
| TTTGAATTCGGGGTGGGAAA+CGG | - | chr8_2:62079903-62079922 | None:intergenic | 45.0% | |
| ! | GTAAGGCGGATTTGAATTCG+GGG | - | chr8_2:62079913-62079932 | None:intergenic | 45.0% |
| ! | GGTAAGGCGGATTTGAATTC+GGG | - | chr8_2:62079914-62079933 | None:intergenic | 45.0% |
| ! | GGGTAAGGCGGATTTGAATT+CGG | - | chr8_2:62079915-62079934 | None:intergenic | 45.0% |
| GAATTCAAATCCGCCTTACC+CGG | + | chr8_2:62079914-62079933 | Msa1260230:CDS | 45.0% | |
| CTTGTAGATGGTGCGAACAA+TGG | - | chr8_2:62080065-62080084 | None:intergenic | 45.0% | |
| GAAGAGGATATGAATGCTCG+TGG | + | chr8_2:62080166-62080185 | Msa1260230:CDS | 45.0% | |
| AAACATCACTGTTGCGGTGT+TGG | - | chr8_2:62080588-62080607 | None:intergenic | 45.0% | |
| AAGAAGAGTCACAGTAGTGG+AGG | + | chr8_2:62080694-62080713 | Msa1260230:intron | 45.0% | |
| AGTGACGAGTTAAGTAGAGG+AGG | + | chr8_2:62080774-62080793 | Msa1260230:intron | 45.0% | |
| TATAGTGTGGGTAAGAGAGC+GGG | + | chr8_2:62081280-62081299 | Msa1260230:intron | 45.0% | |
| ! | TTTTCCCAACTGCAGGAATG+GGG | + | chr8_2:62081370-62081389 | Msa1260230:intron | 45.0% |
| GCAAGGTATAGCCGTGTATA+TGG | - | chr8_2:62081449-62081468 | None:intergenic | 45.0% | |
| ! | CAGATGATTTGGGCCCAAAA+GGG | - | chr8_2:62081734-62081753 | None:intergenic | 45.0% |
| ! | ACAGATGATTTGGGCCCAAA+AGG | - | chr8_2:62081735-62081754 | None:intergenic | 45.0% |
| TGTCGCTCAGTTGTTCTGTT+GGG | - | chr8_2:62081846-62081865 | None:intergenic | 45.0% | |
| TTGATCGTGATTGTGCGTCT+AGG | + | chr8_2:62081913-62081932 | Msa1260230:intron | 45.0% | |
| TGTGCGTCTAGGCAATGAAA+AGG | + | chr8_2:62081924-62081943 | Msa1260230:intron | 45.0% | |
| TAACAGCCAAGAACTCTCCA+TGG | - | chr8_2:62081975-62081994 | None:intergenic | 45.0% | |
| TGGAGAGTTCTTGGCTGTTA+AGG | + | chr8_2:62081975-62081994 | Msa1260230:intron | 45.0% | |
| GCCCCAAAAACACTATAGCA+GGG | - | chr8_2:62082193-62082212 | None:intergenic | 45.0% | |
| AGCCCCAAAAACACTATAGC+AGG | - | chr8_2:62082194-62082213 | None:intergenic | 45.0% | |
| !!! | TGCTATAGTGTTTTTGGGGC+TGG | + | chr8_2:62082193-62082212 | Msa1260230:intron | 45.0% |
| CACATTTATCCAGCCAGGAT+TGG | + | chr8_2:62082224-62082243 | Msa1260230:intron | 45.0% | |
| GCTTCAAACACAGGTAGGAA+TGG | - | chr8_2:62082422-62082441 | None:intergenic | 45.0% | |
| ! | CATATAGGCGATTTGCTCAC+TGG | + | chr8_2:62082528-62082547 | Msa1260230:intron | 45.0% |
| ! | TTCCGAGTAGTTCTGTGCAT+AGG | - | chr8_2:62082745-62082764 | None:intergenic | 45.0% |
| TCACCAGGTTTGTGCTATCA+TGG | + | chr8_2:62083012-62083031 | Msa1260230:intron | 45.0% | |
| CACCAGGTTTGTGCTATCAT+GGG | + | chr8_2:62083013-62083032 | Msa1260230:intron | 45.0% | |
| ATCCCATGATAGCACAAACC+TGG | - | chr8_2:62083018-62083037 | None:intergenic | 45.0% | |
| GACAAAGGCAGAAAGTTGAC+TGG | - | chr8_2:62083053-62083072 | None:intergenic | 45.0% | |
| TTCTGCCTTTGTCAATGGGA+AGG | + | chr8_2:62083060-62083079 | Msa1260230:three_prime_UTR | 45.0% | |
| TCAGACCTTCCCATTGACAA+AGG | - | chr8_2:62083068-62083087 | None:intergenic | 45.0% | |
| ATTTCAAAGTCTCTCCACGG+TGG | + | chr8_2:62083339-62083358 | Msa1260230:three_prime_UTR | 45.0% | |
| AAACTCTTGCGCGAAGAATC+AGG | - | chr8_2:62083450-62083469 | None:intergenic | 45.0% | |
| TCGTGCACTGTTCAATGTTC+AGG | + | chr8_2:62083562-62083581 | Msa1260230:three_prime_UTR | 45.0% | |
| CGTGCACTGTTCAATGTTCA+GGG | + | chr8_2:62083563-62083582 | Msa1260230:three_prime_UTR | 45.0% | |
| CGATGCGAATGGAATGGAGA+TGG | - | chr8_2:62079791-62079810 | None:intergenic | 50.0% | |
| CTTCTGCAATAGGGAGGATG+GGG | - | chr8_2:62079840-62079859 | None:intergenic | 50.0% | |
| GCTTCTGCAATAGGGAGGAT+GGG | - | chr8_2:62079841-62079860 | None:intergenic | 50.0% | |
| AGCTTCTGCAATAGGGAGGA+TGG | - | chr8_2:62079842-62079861 | None:intergenic | 50.0% | |
| ! | AAAGCGCCATGGGAGATAAC+AGG | + | chr8_2:62079875-62079894 | Msa1260230:CDS | 50.0% |
| TTGAATTCGGGGTGGGAAAC+GGG | - | chr8_2:62079902-62079921 | None:intergenic | 50.0% | |
| !!! | CTTTTTCCTTGGTAGTGGCG+GGG | - | chr8_2:62079964-62079983 | None:intergenic | 50.0% |
| !!! | GCTTTTTCCTTGGTAGTGGC+GGG | - | chr8_2:62079965-62079984 | None:intergenic | 50.0% |
| !!! | CGCTTTTTCCTTGGTAGTGG+CGG | - | chr8_2:62079966-62079985 | None:intergenic | 50.0% |
| ! | ACGGTTTCTGGATCGGAAGT+TGG | - | chr8_2:62079995-62080014 | None:intergenic | 50.0% |
| TAGATGGTGCGAACAATGGG+AGG | - | chr8_2:62080061-62080080 | None:intergenic | 50.0% | |
| GAGGATATGAATGCTCGTGG+CGG | + | chr8_2:62080169-62080188 | Msa1260230:CDS | 50.0% | |
| GGCGGTGGTTACCAATCTTA+AGG | + | chr8_2:62080187-62080206 | Msa1260230:CDS | 50.0% | |
| TTCTGGACCCCATACTTGAG+TGG | - | chr8_2:62081333-62081352 | None:intergenic | 50.0% | |
| TGATCCCCATTCCTGCAGTT+GGG | - | chr8_2:62081377-62081396 | None:intergenic | 50.0% | |
| TGCAGGAATGGGGATCAGAT+GGG | + | chr8_2:62081380-62081399 | Msa1260230:intron | 50.0% | |
| TGGTTGTGACAGAGATGAGG+TGG | - | chr8_2:62081823-62081842 | None:intergenic | 50.0% | |
| CTGTCGCTCAGTTGTTCTGT+TGG | - | chr8_2:62081847-62081866 | None:intergenic | 50.0% | |
| CTTCTGCCATGGAGAGTTCT+TGG | + | chr8_2:62081966-62081985 | Msa1260230:intron | 50.0% | |
| ! | TAAGGGGAGCTTTGACCCAA+CGG | - | chr8_2:62082071-62082090 | None:intergenic | 50.0% |
| CTCTGCACATTTATCCAGCC+AGG | + | chr8_2:62082219-62082238 | Msa1260230:intron | 50.0% | |
| ACGGGTCCTGTTATCTCCCA+TGG | - | chr8_2:62079884-62079903 | None:intergenic | 55.0% | |
| ! | GGCGGATTTGAATTCGGGGT+GGG | - | chr8_2:62079909-62079928 | None:intergenic | 55.0% |
| ! | AGGCGGATTTGAATTCGGGG+TGG | - | chr8_2:62079910-62079929 | None:intergenic | 55.0% |
| GTAATCGAGTGCTCCGGGTA+AGG | - | chr8_2:62079930-62079949 | None:intergenic | 55.0% | |
| !! | TTGGTAGTGGCGGGGCAATA+GGG | - | chr8_2:62079956-62079975 | None:intergenic | 55.0% |
| GAACAATGGGAGGACGGTTG+CGG | - | chr8_2:62080051-62080070 | None:intergenic | 55.0% | |
| TGGTGCGAACAATGGGAGGA+CGG | - | chr8_2:62080057-62080076 | None:intergenic | 55.0% | |
| GATATGAATGCTCGTGGCGG+TGG | + | chr8_2:62080172-62080191 | Msa1260230:CDS | 55.0% | |
| TGTGGGTAAGAGAGCGGGTA+TGG | + | chr8_2:62081285-62081304 | Msa1260230:intron | 55.0% | |
| CTGATCCCCATTCCTGCAGT+TGG | - | chr8_2:62081378-62081397 | None:intergenic | 55.0% | |
| CTGCAGGAATGGGGATCAGA+TGG | + | chr8_2:62081379-62081398 | Msa1260230:intron | 55.0% | |
| GGGTGGTTGTGACAGAGATG+AGG | - | chr8_2:62081826-62081845 | None:intergenic | 55.0% | |
| CGCTCAGTTGTTCTGTTGGG+TGG | - | chr8_2:62081843-62081862 | None:intergenic | 55.0% | |
| TAGGCAGCAACCACAACCGT+TGG | + | chr8_2:62082052-62082071 | Msa1260230:intron | 55.0% | |
| AGGCAGCAACCACAACCGTT+GGG | + | chr8_2:62082053-62082072 | Msa1260230:intron | 55.0% | |
| ! | GAGCTTTGACCCAACGGTTG+TGG | - | chr8_2:62082065-62082084 | None:intergenic | 55.0% |
| CTTTAGCTGCCAATCCTGGC+TGG | - | chr8_2:62082236-62082255 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGTTTAGCCACCG+TGG | - | chr8_2:62083356-62083375 | None:intergenic | 55.0% |
| ATCGAGTGCTCCGGGTAAGG+CGG | - | chr8_2:62079927-62079946 | None:intergenic | 60.0% | |
| GGACGGTAATCGAGTGCTCC+GGG | - | chr8_2:62079935-62079954 | None:intergenic | 60.0% | |
| GGGACGGTAATCGAGTGCTC+CGG | - | chr8_2:62079936-62079955 | None:intergenic | 60.0% | |
| ! | TAGTGGCGGGGCAATAGGGA+CGG | - | chr8_2:62079952-62079971 | None:intergenic | 60.0% |
| !! | CTTGGTAGTGGCGGGGCAAT+AGG | - | chr8_2:62079957-62079976 | None:intergenic | 60.0% |
| CTATTGCCCCGCCACTACCA+AGG | + | chr8_2:62079955-62079974 | Msa1260230:CDS | 60.0% | |
| !! | ACGGTTGCGGCGTTGATCAC+GGG | - | chr8_2:62080038-62080057 | None:intergenic | 60.0% |
| !! | GACGGTTGCGGCGTTGATCA+CGG | - | chr8_2:62080039-62080058 | None:intergenic | 60.0% |
| GGAGGATGGGGACTTCGCCA+TGG | - | chr8_2:62079828-62079847 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 62079758 | 62083611 | 62079758 | ID=Msa1260230;Name=Msa1260230 |
| chr8_2 | mRNA | 62079758 | 62083611 | 62079758 | ID=Msa1260230-mRNA-1;Parent=Msa1260230;Name=Msa1260230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=69|0|0.5|1|0|0.5|2|593|126 |
| chr8_2 | exon | 62079758 | 62080207 | 62079758 | ID=Msa1260230-mRNA-1:exon:19600;Parent=Msa1260230-mRNA-1 |
| chr8_2 | exon | 62083019 | 62083611 | 62083019 | ID=Msa1260230-mRNA-1:exon:19601;Parent=Msa1260230-mRNA-1 |
| chr8_2 | five_prime_UTR | 62079758 | 62079826 | 62079758 | ID=Msa1260230-mRNA-1:five_prime_utr;Parent=Msa1260230-mRNA-1 |
| chr8_2 | CDS | 62079827 | 62080207 | 62079827 | ID=Msa1260230-mRNA-1:cds;Parent=Msa1260230-mRNA-1 |
| chr8_2 | three_prime_UTR | 62083019 | 62083611 | 62083019 | ID=Msa1260230-mRNA-1:three_prime_utr;Parent=Msa1260230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
