Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300110 | XP_013458006.1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 3.89e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300110 | I3SNP1 | 96.825 | 126 | 4 | 0 | 1 | 126 | 1 | 126 | 1.86e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1260230 | Msa1300110 | 0.874635 | 5.788453e-68 | -8.615850e-47 |
| Msa1205410 | Msa1300110 | 0.800822 | 1.203673e-48 | -8.615850e-47 |
| Msa1213050 | Msa1300110 | 0.846898 | 1.626683e-59 | -8.615850e-47 |
| Msa0598830 | Msa1300110 | 0.804825 | 1.793851e-49 | -8.615850e-47 |
| Msa0881210 | Msa1300110 | 0.829560 | 4.806586e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300110 | MtrunA17_Chr4g0061551 | 97.561 | 123 | 3 | 0 | 1 | 123 | 1 | 123 | 2.54e-86 | 248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300110 | AT5G08060.1 | 53.846 | 130 | 55 | 2 | 1 | 125 | 1 | 130 | 1.32e-46 | 147 |
Find 88 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATCGTAAACGGTTTC+TGG | 0.123041 | 8_3:-61535115 | None:intergenic |
| TAATAAGGCAATTTACTTTC+TGG | 0.170256 | 8_3:-61538309 | None:intergenic |
| ACCATGCAGCATCTACATTT+TGG | 0.215272 | 8_3:+61538472 | Msa1300110:three_prime_UTR |
| CTTGAAATTCCCTGTTTGTT+TGG | 0.223107 | 8_3:+61538390 | Msa1300110:three_prime_UTR |
| ATCCTCTTCAACAATAATAT+TGG | 0.235925 | 8_3:-61535263 | None:intergenic |
| CAATGTTCAGGGTATTATTA+AGG | 0.249157 | 8_3:+61538673 | Msa1300110:three_prime_UTR |
| CTTGGTAGTGGCGGGGCAAT+AGG | 0.256934 | 8_3:-61535065 | None:intergenic |
| CGTTTAAAATAGACAATTAC+AGG | 0.283108 | 8_3:-61538203 | None:intergenic |
| TCGTGCACTGTTCAATGTTC+AGG | 0.301853 | 8_3:+61538661 | Msa1300110:three_prime_UTR |
| CAACTTTCTGCCTTTGTCAA+TGG | 0.313049 | 8_3:+61538154 | Msa1300110:three_prime_UTR |
| GGTAAGGCGGATTTGAATTC+GGG | 0.330486 | 8_3:-61535022 | None:intergenic |
| CACCAGGTTTGTGCTATCAT+TGG | 0.339445 | 8_3:+61538112 | Msa1300110:intron |
| GGGTAAGGCGGATTTGAATT+CGG | 0.340087 | 8_3:-61535023 | None:intergenic |
| CACTCATAATCCAAACAAAC+AGG | 0.350183 | 8_3:-61538400 | None:intergenic |
| ATCAATAATAAAAGGTTGTT+AGG | 0.354639 | 8_3:+61538242 | Msa1300110:three_prime_UTR |
| TTGAATTCGGGGTGGGAAAC+GGG | 0.360855 | 8_3:-61535010 | None:intergenic |
| TCCTCTTCAACAATAATATT+GGG | 0.376182 | 8_3:-61535262 | None:intergenic |
| AACTTTCTGCCTTTGTCAAT+GGG | 0.387535 | 8_3:+61538155 | Msa1300110:three_prime_UTR |
| TTTGAATTCGGGGTGGGAAA+CGG | 0.389873 | 8_3:-61535011 | None:intergenic |
| ACAATAATATTGGGATAAAT+CGG | 0.396910 | 8_3:-61535253 | None:intergenic |
| AAACTCTTGCGCGAAGAATC+AGG | 0.398005 | 8_3:-61538546 | None:intergenic |
| GATATCAGCTTTCTTGTAGA+TGG | 0.398615 | 8_3:-61535185 | None:intergenic |
| ATTAAGGACTCTTGTGTTGA+GGG | 0.420699 | 8_3:+61538689 | Msa1300110:three_prime_UTR |
| GCTTTGAGAAAGTTTATTTG+TGG | 0.434917 | 8_3:+61538571 | Msa1300110:three_prime_UTR |
| ATAGTATTTGATATCGTAAA+CGG | 0.437783 | 8_3:-61535122 | None:intergenic |
| TTGTAGATGGTGCGAACAAT+GGG | 0.438576 | 8_3:-61535172 | None:intergenic |
| GGCGGTGGTTACCAATCTTA+AGG | 0.444855 | 8_3:+61535298 | Msa1300110:CDS |
| GACGGTTGCGGCGTTGATCA+CGG | 0.445310 | 8_3:-61535147 | None:intergenic |
| TTGGTAGTGGCGGGGCAATA+GGG | 0.455000 | 8_3:-61535064 | None:intergenic |
| AAAGCGCCATGGGAGATAAC+AGG | 0.462207 | 8_3:+61534986 | Msa1300110:CDS |
| TCCCAATATTATTGTTGAAG+AGG | 0.466589 | 8_3:+61535261 | Msa1300110:CDS |
| ACGGTTTCTGGATCGGAAGT+TGG | 0.480049 | 8_3:-61535103 | None:intergenic |
| ATCGTAAACGGTTTCTGGAT+CGG | 0.484413 | 8_3:-61535110 | None:intergenic |
| AGCTTCTGCAATAGGGAGGA+TGG | 0.485294 | 8_3:-61534950 | None:intergenic |
| CTTGTAGATGGTGCGAACAA+TGG | 0.486997 | 8_3:-61535173 | None:intergenic |
| ACGGTTGCGGCGTTGATCAC+GGG | 0.489099 | 8_3:-61535146 | None:intergenic |
| GAACAATGGGAGGACGGTTG+CGG | 0.493599 | 8_3:-61535159 | None:intergenic |
| AACATAAATTTAGAAGAATG+AGG | 0.496414 | 8_3:-61538617 | None:intergenic |
| GCGTACTTATTTGTGTTCAT+CGG | 0.498339 | 8_3:+61538285 | Msa1300110:three_prime_UTR |
| TTCTGCCTTTGTCAATGGGA+AGG | 0.498576 | 8_3:+61538159 | Msa1300110:three_prime_UTR |
| CGATGCGAATGGAATGGAGA+TGG | 0.500990 | 8_3:-61534899 | None:intergenic |
| TGAGAAAGTTTATTTGTGGA+TGG | 0.502712 | 8_3:+61538575 | Msa1300110:three_prime_UTR |
| CGTGCACTGTTCAATGTTCA+GGG | 0.512982 | 8_3:+61538662 | Msa1300110:three_prime_UTR |
| GATGCGAATGGAATGGAGAT+GGG | 0.515301 | 8_3:-61534898 | None:intergenic |
| GATATGAATGCTCGTGGCGG+TGG | 0.519485 | 8_3:+61535283 | Msa1300110:CDS |
| GTAATCGAGTGCTCCGGGTA+AGG | 0.522391 | 8_3:-61535038 | None:intergenic |
| TATTAAGGACTCTTGTGTTG+AGG | 0.524851 | 8_3:+61538688 | Msa1300110:three_prime_UTR |
| CAAACAAACAGGGAATTTCA+AGG | 0.525732 | 8_3:-61538389 | None:intergenic |
| GGGACGGTAATCGAGTGCTC+CGG | 0.539030 | 8_3:-61535044 | None:intergenic |
| GGACGGTAATCGAGTGCTCC+GGG | 0.539896 | 8_3:-61535043 | None:intergenic |
| GCTTCTGCAATAGGGAGGAT+GGG | 0.541038 | 8_3:-61534949 | None:intergenic |
| GACAAAGGCAGAAAGTTGAC+TGG | 0.541579 | 8_3:-61538149 | None:intergenic |
| GAATTCAAATCCGCCTTACC+CGG | 0.542162 | 8_3:+61535025 | Msa1300110:CDS |
| ACGGGTCCTGTTATCTCCCA+TGG | 0.545601 | 8_3:-61534992 | None:intergenic |
| GGCGGATTTGAATTCGGGGT+GGG | 0.546935 | 8_3:-61535017 | None:intergenic |
| AAGCTGATATCGAGAAACTC+AGG | 0.555463 | 8_3:+61535197 | Msa1300110:CDS |
| CTTCTGCAATAGGGAGGATG+GGG | 0.560904 | 8_3:-61534948 | None:intergenic |
| GATTCTCGATGCGAATGGAA+TGG | 0.571340 | 8_3:-61534905 | None:intergenic |
| TGCCTCATTGACTTGATATG+TGG | 0.574581 | 8_3:+61538351 | Msa1300110:three_prime_UTR |
| ATCGAGTGCTCCGGGTAAGG+CGG | 0.581020 | 8_3:-61535035 | None:intergenic |
| TTAAGGACTCTTGTGTTGAG+GGG | 0.596158 | 8_3:+61538690 | Msa1300110:three_prime_UTR |
| GGAGGATGGGGATTTCGCCA+TGG | 0.597858 | 8_3:-61534936 | None:intergenic |
| AAGCTTCATCAAAGCGCCAT+GGG | 0.605317 | 8_3:+61534976 | Msa1300110:CDS |
| TCAGACCTTCCCATTGACAA+AGG | 0.606581 | 8_3:-61538164 | None:intergenic |
| AAAGCTTCATCAAAGCGCCA+TGG | 0.606824 | 8_3:+61534975 | Msa1300110:CDS |
| CTATTGCCCCGCCACTACCA+AGG | 0.608087 | 8_3:+61535066 | Msa1300110:CDS |
| TGGTGCGAACAATGGGAGGA+CGG | 0.610543 | 8_3:-61535165 | None:intergenic |
| AGAAGAATGAGGCAACATAG+AGG | 0.614244 | 8_3:-61538606 | None:intergenic |
| AAATGTAGATGCTGCATGGT+TGG | 0.615620 | 8_3:-61538469 | None:intergenic |
| GTAAGGCGGATTTGAATTCG+GGG | 0.621827 | 8_3:-61535021 | None:intergenic |
| TTTCAGCTTCTGCAATAGGG+AGG | 0.622425 | 8_3:-61534954 | None:intergenic |
| TCCAAAATGTAGATGCTGCA+TGG | 0.623541 | 8_3:-61538473 | None:intergenic |
| GAATCAGATTGAAAATTGAA+CGG | 0.629176 | 8_3:-61534875 | None:intergenic |
| TAGTGGCGGGGCAATAGGGA+CGG | 0.630605 | 8_3:-61535060 | None:intergenic |
| ATGCGAATGGAATGGAGATG+GGG | 0.633055 | 8_3:-61534897 | None:intergenic |
| ACAAAGGCAGAAAGTTGACT+GGG | 0.636346 | 8_3:-61538148 | None:intergenic |
| TGATTGATTCTCGATGCGAA+TGG | 0.639448 | 8_3:-61534910 | None:intergenic |
| ATAATATTGGGATAAATCGG+AGG | 0.646994 | 8_3:-61535250 | None:intergenic |
| TAGATGGTGCGAACAATGGG+AGG | 0.648838 | 8_3:-61535169 | None:intergenic |
| GGTTGGTTGTTTAGCCACCG+TGG | 0.652043 | 8_3:-61538452 | None:intergenic |
| ATGATTTCAAAGTCTCTCCA+CGG | 0.660113 | 8_3:+61538435 | Msa1300110:three_prime_UTR |
| AGGCGGATTTGAATTCGGGG+TGG | 0.660754 | 8_3:-61535018 | None:intergenic |
| TCGAGAATCAATCACAACCA+TGG | 0.661556 | 8_3:+61534919 | Msa1300110:exon |
| TACCACATATCAAGTCAATG+AGG | 0.673357 | 8_3:-61538353 | None:intergenic |
| ACTCATAATCCAAACAAACA+GGG | 0.681538 | 8_3:-61538399 | None:intergenic |
| GAAGAGGATATGAATGCTCG+TGG | 0.716215 | 8_3:+61535277 | Msa1300110:CDS |
| ATTTCAAAGTCTCTCCACGG+TGG | 0.747531 | 8_3:+61538438 | Msa1300110:three_prime_UTR |
| GAGGATATGAATGCTCGTGG+CGG | 0.770619 | 8_3:+61535280 | Msa1300110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTAAAGAAATTTAAA+TGG | + | chr8_3:61536311-61536330 | Msa1300110:intron | 10.0% |
| !! | TTGGTATAAAAAATAATTAA+AGG | + | chr8_3:61537419-61537438 | Msa1300110:intron | 10.0% |
| !! | TTAGGAAAATAAAAATAAAA+AGG | + | chr8_3:61537664-61537683 | Msa1300110:intron | 10.0% |
| !!! | TTTTTACTTTATTTTCTTGA+GGG | - | chr8_3:61535634-61535653 | None:intergenic | 15.0% |
| !!! | ATTTTTACTTTATTTTCTTG+AGG | - | chr8_3:61535635-61535654 | None:intergenic | 15.0% |
| !! | AGAAAATAAAGTAAAAATAG+CGG | + | chr8_3:61535637-61535656 | Msa1300110:intron | 15.0% |
| !!! | ATTTTGATGTTATATTGTTT+TGG | + | chr8_3:61536252-61536271 | Msa1300110:intron | 15.0% |
| !! | GCCTATAATTATTAATATTT+GGG | + | chr8_3:61536591-61536610 | Msa1300110:intron | 15.0% |
| !! | TCCCAAATATTAATAATTAT+AGG | - | chr8_3:61536595-61536614 | None:intergenic | 15.0% |
| !!! | AGCTAAAGTTTAAAATATAT+TGG | + | chr8_3:61537353-61537372 | Msa1300110:intron | 15.0% |
| !!! | TTTTTTCTACTTCATTATTA+TGG | + | chr8_3:61537384-61537403 | Msa1300110:intron | 15.0% |
| !! | AATATAGTATGCTATAAATT+TGG | - | chr8_3:61537884-61537903 | None:intergenic | 15.0% |
| !!! | CATTTTGTATCAATAATAAA+AGG | + | chr8_3:61538234-61538253 | Msa1300110:three_prime_UTR | 15.0% |
| !! | TTGTTAAAAAGTCAATAATA+AGG | - | chr8_3:61538327-61538346 | None:intergenic | 15.0% |
| !! | ATAGTATTTGATATCGTAAA+CGG | - | chr8_3:61535125-61535144 | None:intergenic | 20.0% |
| !! | ACAATAATATTGGGATAAAT+CGG | - | chr8_3:61535256-61535275 | None:intergenic | 20.0% |
| !! | AAACATGAGAATTAATATGA+AGG | - | chr8_3:61535334-61535353 | None:intergenic | 20.0% |
| !!! | TTGTTGATGATTAATTGATT+AGG | + | chr8_3:61535354-61535373 | Msa1300110:intron | 20.0% |
| !!! | TGTTGATGATTAATTGATTA+GGG | + | chr8_3:61535355-61535374 | Msa1300110:intron | 20.0% |
| !!! | TTTCTAAAATTCTGAAAAAG+AGG | + | chr8_3:61535718-61535737 | Msa1300110:intron | 20.0% |
| !!! | TTCTAAAATTCTGAAAAAGA+GGG | + | chr8_3:61535719-61535738 | Msa1300110:intron | 20.0% |
| !! | CATTCAATAAATGATGTATT+TGG | + | chr8_3:61536136-61536155 | Msa1300110:intron | 20.0% |
| !!! | TAAGCAAAAATCAACTTTTT+TGG | - | chr8_3:61536111-61536130 | None:intergenic | 20.0% |
| !! | TTTGGATAAATTAAATACCT+TGG | + | chr8_3:61536270-61536289 | Msa1300110:intron | 20.0% |
| !! | GGCCTATAATTATTAATATT+TGG | + | chr8_3:61536590-61536609 | Msa1300110:intron | 20.0% |
| !!! | TAGTTCAATGGAAAATTTTA+AGG | - | chr8_3:61536666-61536685 | None:intergenic | 20.0% |
| !! | ATCAAATGTTTATAGTTCAA+TGG | - | chr8_3:61536678-61536697 | None:intergenic | 20.0% |
| !!! | AGTTTAAAATATATTGGTGT+TGG | + | chr8_3:61537359-61537378 | Msa1300110:intron | 20.0% |
| !!! | ATTATGGTTTGATGTTATTT+TGG | + | chr8_3:61537400-61537419 | Msa1300110:intron | 20.0% |
| !!! | TAATATCATGTTTTTCTGTT+TGG | + | chr8_3:61537783-61537802 | Msa1300110:intron | 20.0% |
| !!! | TATATAAATTGATCTGGAAT+TGG | - | chr8_3:61537978-61537997 | None:intergenic | 20.0% |
| !! | AAAGTGTATATAAATTGATC+TGG | - | chr8_3:61537984-61538003 | None:intergenic | 20.0% |
| !!! | CTGTAATTGTCTATTTTAAA+CGG | + | chr8_3:61538204-61538223 | Msa1300110:three_prime_UTR | 20.0% |
| !! | ATCAATAATAAAAGGTTGTT+AGG | + | chr8_3:61538242-61538261 | Msa1300110:three_prime_UTR | 20.0% |
| !!! | AATGAATCCTCATTTTTTTT+AGG | + | chr8_3:61538496-61538515 | Msa1300110:three_prime_UTR | 20.0% |
| !! | AAAATTGCCTAAAAAAAATG+AGG | - | chr8_3:61538506-61538525 | None:intergenic | 20.0% |
| !! | AACATAAATTTAGAAGAATG+AGG | - | chr8_3:61538620-61538639 | None:intergenic | 20.0% |
| ! | GAATCAGATTGAAAATTGAA+CGG | - | chr8_3:61534878-61534897 | None:intergenic | 25.0% |
| ! | TCCTCTTCAACAATAATATT+GGG | - | chr8_3:61535265-61535284 | None:intergenic | 25.0% |
| ! | ATCCTCTTCAACAATAATAT+TGG | - | chr8_3:61535266-61535285 | None:intergenic | 25.0% |
| !!! | AGTTCCAACAATTTTTTATC+TGG | + | chr8_3:61535495-61535514 | Msa1300110:intron | 25.0% |
| ! | GTATCCAGATAAAAAATTGT+TGG | - | chr8_3:61535502-61535521 | None:intergenic | 25.0% |
| !! | CCAGATTATCAATTTTCAAA+AGG | - | chr8_3:61535551-61535570 | None:intergenic | 25.0% |
| !!! | CCTTTTGAAAATTGATAATC+TGG | + | chr8_3:61535548-61535567 | Msa1300110:intron | 25.0% |
| ! | AAAAAAAGTCCTTCTAATCA+TGG | - | chr8_3:61535608-61535627 | None:intergenic | 25.0% |
| !! | TAAAAATAGCGGAGTAAAAT+AGG | + | chr8_3:61535648-61535667 | Msa1300110:intron | 25.0% |
| !! | AAAAATAGCGGAGTAAAATA+GGG | + | chr8_3:61535649-61535668 | Msa1300110:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr8_3:61536209-61536228 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_3:61536209-61536228 | Msa1300110:intron | 25.0% |
| ! | ATCATGAAAATTACAAACCA+AGG | - | chr8_3:61536290-61536309 | None:intergenic | 25.0% |
| ! | AAATACTTGTATCTAGATTC+TGG | - | chr8_3:61536455-61536474 | None:intergenic | 25.0% |
| ! | TCATGTTAAAAAGAGAGATA+CGG | + | chr8_3:61536634-61536653 | Msa1300110:intron | 25.0% |
| ! | AACAACACAGATGAAAATTT+GGG | + | chr8_3:61536734-61536753 | Msa1300110:intron | 25.0% |
| ! | TATGAATAGAGTCTTAAAGA+AGG | - | chr8_3:61536791-61536810 | None:intergenic | 25.0% |
| ! | AAAAATCGTAGTCTAGATAA+GGG | - | chr8_3:61537193-61537212 | None:intergenic | 25.0% |
| ! | GACACAATTTCATTTCATAT+AGG | + | chr8_3:61537618-61537637 | Msa1300110:intron | 25.0% |
| ! | AAAAAATTGCTTACAGCATA+GGG | - | chr8_3:61537747-61537766 | None:intergenic | 25.0% |
| ! | TAAAAAATTGCTTACAGCAT+AGG | - | chr8_3:61537748-61537767 | None:intergenic | 25.0% |
| !! | CGTTTAAAATAGACAATTAC+AGG | - | chr8_3:61538206-61538225 | None:intergenic | 25.0% |
| ! | TAATAAGGCAATTTACTTTC+TGG | - | chr8_3:61538312-61538331 | None:intergenic | 25.0% |
| ATAATATTGGGATAAATCGG+AGG | - | chr8_3:61535253-61535272 | None:intergenic | 30.0% | |
| TCCCAATATTATTGTTGAAG+AGG | + | chr8_3:61535261-61535280 | Msa1300110:CDS | 30.0% | |
| GAAAAATGTGACCTTAAGAT+TGG | - | chr8_3:61535312-61535331 | None:intergenic | 30.0% | |
| ! | GGATTTGTTTAATTGCTCTA+TGG | + | chr8_3:61535376-61535395 | Msa1300110:intron | 30.0% |
| TCATACAACAAGTTACTAGA+CGG | - | chr8_3:61535407-61535426 | None:intergenic | 30.0% | |
| ! | AATTGATAATCTGGAACATG+CGG | + | chr8_3:61535557-61535576 | Msa1300110:intron | 30.0% |
| ! | AAAATAGCGGAGTAAAATAG+GGG | + | chr8_3:61535650-61535669 | Msa1300110:intron | 30.0% |
| TTAGAAAAACATCACTGTTG+CGG | - | chr8_3:61535705-61535724 | None:intergenic | 30.0% | |
| ATTATAATAACTACTCCCTC+CGG | + | chr8_3:61536079-61536098 | Msa1300110:intron | 30.0% | |
| ATTTCTCGTAGTTATAGTGT+GGG | + | chr8_3:61536373-61536392 | Msa1300110:intron | 30.0% | |
| TTGTATATTCACACCCAAAT+AGG | + | chr8_3:61536703-61536722 | Msa1300110:intron | 30.0% | |
| TTGTTCTTCTAGTCCTATTT+GGG | - | chr8_3:61536719-61536738 | None:intergenic | 30.0% | |
| GAACAACACAGATGAAAATT+TGG | + | chr8_3:61536733-61536752 | Msa1300110:intron | 30.0% | |
| GCTAAAGAAACAGATGATTT+GGG | - | chr8_3:61536849-61536868 | None:intergenic | 30.0% | |
| AGCTAAAGAAACAGATGATT+TGG | - | chr8_3:61536850-61536869 | None:intergenic | 30.0% | |
| CATTACCTTTCATTTCTAAG+AGG | + | chr8_3:61537129-61537148 | Msa1300110:intron | 30.0% | |
| ! | ATTAGCCTCTTAGAAATGAA+AGG | - | chr8_3:61537137-61537156 | None:intergenic | 30.0% |
| ! | TCATTTCTAAGAGGCTAATT+AGG | + | chr8_3:61537138-61537157 | Msa1300110:intron | 30.0% |
| AAAATCGTAGTCTAGATAAG+GGG | - | chr8_3:61537192-61537211 | None:intergenic | 30.0% | |
| CAAAAATCGTAGTCTAGATA+AGG | - | chr8_3:61537194-61537213 | None:intergenic | 30.0% | |
| ! | CTTATCTAGACTACGATTTT+TGG | + | chr8_3:61537192-61537211 | Msa1300110:intron | 30.0% |
| TGATGATATGTCTTCAATTC+TGG | + | chr8_3:61537222-61537241 | Msa1300110:intron | 30.0% | |
| ATAGTAGTATGAAGATACAC+TGG | + | chr8_3:61537497-61537516 | Msa1300110:intron | 30.0% | |
| AAATGAAATTGTGTCCAAAC+AGG | - | chr8_3:61537613-61537632 | None:intergenic | 30.0% | |
| !!! | TGCTGTAAGCAATTTTTTAG+AGG | + | chr8_3:61537749-61537768 | Msa1300110:intron | 30.0% |
| ACTCATAATCCAAACAAACA+GGG | - | chr8_3:61538402-61538421 | None:intergenic | 30.0% | |
| !! | GCTTTGAGAAAGTTTATTTG+TGG | + | chr8_3:61538571-61538590 | Msa1300110:three_prime_UTR | 30.0% |
| TGAGAAAGTTTATTTGTGGA+TGG | + | chr8_3:61538575-61538594 | Msa1300110:three_prime_UTR | 30.0% | |
| ! | CAATGTTCAGGGTATTATTA+AGG | + | chr8_3:61538673-61538692 | Msa1300110:three_prime_UTR | 30.0% |
| !!! | TGGAATAATCGCTTTTTCCT+TGG | - | chr8_3:61535086-61535105 | None:intergenic | 35.0% |
| TTGATATCGTAAACGGTTTC+TGG | - | chr8_3:61535118-61535137 | None:intergenic | 35.0% | |
| GATATCAGCTTTCTTGTAGA+TGG | - | chr8_3:61535188-61535207 | None:intergenic | 35.0% | |
| GAGCAGATGAAATGCATAAT+AGG | + | chr8_3:61535468-61535487 | Msa1300110:intron | 35.0% | |
| TGATGTTAGTCCATAAGAGT+AGG | + | chr8_3:61535522-61535541 | Msa1300110:intron | 35.0% | |
| GATGTTAGTCCATAAGAGTA+GGG | + | chr8_3:61535523-61535542 | Msa1300110:intron | 35.0% | |
| ! | ATTGATAATCTGGAACATGC+GGG | + | chr8_3:61535558-61535577 | Msa1300110:intron | 35.0% |
| TTGTTGACACCATGATTAGA+AGG | + | chr8_3:61535596-61535615 | Msa1300110:intron | 35.0% | |
| ATTGAGTTCAGACGCAATAT+GGG | - | chr8_3:61535676-61535695 | None:intergenic | 35.0% | |
| ! | TTCTGAAAAAGAGGGAAATC+TGG | + | chr8_3:61535727-61535746 | Msa1300110:intron | 35.0% |
| GATTTCTCGTAGTTATAGTG+TGG | + | chr8_3:61536372-61536391 | Msa1300110:intron | 35.0% | |
| AGTTGTTATCCACTCAAGTA+TGG | + | chr8_3:61536426-61536445 | Msa1300110:intron | 35.0% | |
| GTTGTTATCCACTCAAGTAT+GGG | + | chr8_3:61536427-61536446 | Msa1300110:intron | 35.0% | |
| TTGTTATCCACTCAAGTATG+GGG | + | chr8_3:61536428-61536447 | Msa1300110:intron | 35.0% | |
| !!! | AGTATTTTTTTCCCAACTGC+AGG | + | chr8_3:61536468-61536487 | Msa1300110:intron | 35.0% |
| GTTGACAATAGGTAAGGTAT+GGG | - | chr8_3:61536526-61536545 | None:intergenic | 35.0% | |
| ATATGGATGAGGTTGACAAT+AGG | - | chr8_3:61536537-61536556 | None:intergenic | 35.0% | |
| GTTGTTCTTCTAGTCCTATT+TGG | - | chr8_3:61536720-61536739 | None:intergenic | 35.0% | |
| ! | AATCAGCACAACGCATTTTT+CGG | + | chr8_3:61536760-61536779 | Msa1300110:intron | 35.0% |
| ATAGAGTCTTAAAGAAGGAG+CGG | - | chr8_3:61536786-61536805 | None:intergenic | 35.0% | |
| TAATTCATACCGACAAACAC+AGG | + | chr8_3:61536809-61536828 | Msa1300110:intron | 35.0% | |
| ! | AAACACAGGTAAACCCTTTT+GGG | + | chr8_3:61536823-61536842 | Msa1300110:intron | 35.0% |
| AATGAGAAGAGACAAAACAG+AGG | - | chr8_3:61536882-61536901 | None:intergenic | 35.0% | |
| TAACGTTTGAACCCATTTGT+AGG | + | chr8_3:61537103-61537122 | Msa1300110:intron | 35.0% | |
| ! | AGGTTGTCATTCAGAGTATT+TGG | + | chr8_3:61537439-61537458 | Msa1300110:intron | 35.0% |
| AAATAGCTTCAAACACAGGT+AGG | - | chr8_3:61537532-61537551 | None:intergenic | 35.0% | |
| TGTGTTATCCTAATCCTGTT+TGG | + | chr8_3:61537596-61537615 | Msa1300110:intron | 35.0% | |
| AATTGTGTCCAAACAGGATT+AGG | - | chr8_3:61537607-61537626 | None:intergenic | 35.0% | |
| ! | TGCTCACTGGTTAGTTATTT+AGG | + | chr8_3:61537646-61537665 | Msa1300110:intron | 35.0% |
| ! | GATGCTAAATTTTGCAACTG+CGG | + | chr8_3:61537686-61537705 | Msa1300110:intron | 35.0% |
| GGACACAATCTCGATATATT+AGG | + | chr8_3:61537804-61537823 | Msa1300110:intron | 35.0% | |
| AACTTTCTGCCTTTGTCAAT+GGG | + | chr8_3:61538155-61538174 | Msa1300110:three_prime_UTR | 35.0% | |
| GCGTACTTATTTGTGTTCAT+CGG | + | chr8_3:61538285-61538304 | Msa1300110:three_prime_UTR | 35.0% | |
| TACCACATATCAAGTCAATG+AGG | - | chr8_3:61538356-61538375 | None:intergenic | 35.0% | |
| CAAACAAACAGGGAATTTCA+AGG | - | chr8_3:61538392-61538411 | None:intergenic | 35.0% | |
| CTTGAAATTCCCTGTTTGTT+TGG | + | chr8_3:61538390-61538409 | Msa1300110:three_prime_UTR | 35.0% | |
| CACTCATAATCCAAACAAAC+AGG | - | chr8_3:61538403-61538422 | None:intergenic | 35.0% | |
| ATGATTTCAAAGTCTCTCCA+CGG | + | chr8_3:61538435-61538454 | Msa1300110:three_prime_UTR | 35.0% | |
| ! | TGATTGATTCTCGATGCGAA+TGG | - | chr8_3:61534913-61534932 | None:intergenic | 40.0% |
| TCGAGAATCAATCACAACCA+TGG | + | chr8_3:61534919-61534938 | Msa1300110:exon | 40.0% | |
| ! | GCTTTTCAGCTTCTGCAATA+GGG | - | chr8_3:61534960-61534979 | None:intergenic | 40.0% |
| ! | AGCTTTTCAGCTTCTGCAAT+AGG | - | chr8_3:61534961-61534980 | None:intergenic | 40.0% |
| !!! | AATCGCTTTTTCCTTGGTAG+TGG | - | chr8_3:61535080-61535099 | None:intergenic | 40.0% |
| ! | ATCGTAAACGGTTTCTGGAT+CGG | - | chr8_3:61535113-61535132 | None:intergenic | 40.0% |
| TTGTAGATGGTGCGAACAAT+GGG | - | chr8_3:61535175-61535194 | None:intergenic | 40.0% | |
| AAGCTGATATCGAGAAACTC+AGG | + | chr8_3:61535197-61535216 | Msa1300110:CDS | 40.0% | |
| CAAAAGGAACCCTACTCTTA+TGG | - | chr8_3:61535535-61535554 | None:intergenic | 40.0% | |
| GAACATGCGGGAAAAATCAT+TGG | + | chr8_3:61535570-61535589 | Msa1300110:intron | 40.0% | |
| GATTGAGTTCAGACGCAATA+TGG | - | chr8_3:61535677-61535696 | None:intergenic | 40.0% | |
| TAGAAGAAGAGTCACAGTAG+TGG | + | chr8_3:61535807-61535826 | Msa1300110:intron | 40.0% | |
| AGAAGTGACGAGTTAAGTAG+AGG | + | chr8_3:61535877-61535896 | Msa1300110:intron | 40.0% | |
| TAGTAGAAGAGTCACAGTAG+AGG | + | chr8_3:61535978-61535997 | Msa1300110:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr8_3:61536213-61536232 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr8_3:61536212-61536231 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_3:61536212-61536231 | Msa1300110:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_3:61536213-61536232 | Msa1300110:intron | 40.0% | |
| TCTCAAATAAGTACTCCCTC+CGG | - | chr8_3:61536231-61536250 | None:intergenic | 40.0% | |
| TTATAGTGTGGGTAAGAGAG+CGG | + | chr8_3:61536384-61536403 | Msa1300110:intron | 40.0% | |
| !!! | TTTTTTCCCAACTGCAGGAA+TGG | + | chr8_3:61536473-61536492 | Msa1300110:intron | 40.0% |
| ! | TTTTTCCCAACTGCAGGAAT+GGG | + | chr8_3:61536474-61536493 | Msa1300110:intron | 40.0% |
| CAATAGGTAAGGTATGGGTA+GGG | - | chr8_3:61536521-61536540 | None:intergenic | 40.0% | |
| ACAATAGGTAAGGTATGGGT+AGG | - | chr8_3:61536522-61536541 | None:intergenic | 40.0% | |
| GGTTGACAATAGGTAAGGTA+TGG | - | chr8_3:61536527-61536546 | None:intergenic | 40.0% | |
| GATGAGGTTGACAATAGGTA+AGG | - | chr8_3:61536532-61536551 | None:intergenic | 40.0% | |
| GTCAACCTCATCCATATACA+CGG | + | chr8_3:61536540-61536559 | Msa1300110:intron | 40.0% | |
| TATAGCCGTGTATATGGATG+AGG | - | chr8_3:61536548-61536567 | None:intergenic | 40.0% | |
| GCTATACCTTGCAAAAACAC+AGG | + | chr8_3:61536562-61536581 | Msa1300110:intron | 40.0% | |
| !! | CATTGACCTGTGTTTTTGCA+AGG | - | chr8_3:61536571-61536590 | None:intergenic | 40.0% |
| CTTGCAAAAACACAGGTCAA+TGG | + | chr8_3:61536569-61536588 | Msa1300110:intron | 40.0% | |
| TGGGAGAATGATGAATGATG+TGG | + | chr8_3:61536610-61536629 | Msa1300110:intron | 40.0% | |
| AAGGGTTTACCTGTGTTTGT+CGG | - | chr8_3:61536821-61536840 | None:intergenic | 40.0% | |
| ! | CAAACACAGGTAAACCCTTT+TGG | + | chr8_3:61536822-61536841 | Msa1300110:intron | 40.0% |
| GTGATAGAAAACTTCTGCCA+TGG | + | chr8_3:61537060-61537079 | Msa1300110:intron | 40.0% | |
| AGGTAATGCTGCCTACAAAT+GGG | - | chr8_3:61537117-61537136 | None:intergenic | 40.0% | |
| AAGGTAATGCTGCCTACAAA+TGG | - | chr8_3:61537118-61537137 | None:intergenic | 40.0% | |
| ! | TCACCCTGCTATAGTGTTTT+TGG | + | chr8_3:61537292-61537311 | Msa1300110:intron | 40.0% |
| ! | CACCCTGCTATAGTGTTTTT+GGG | + | chr8_3:61537293-61537312 | Msa1300110:intron | 40.0% |
| !! | ACCCTGCTATAGTGTTTTTG+GGG | + | chr8_3:61537294-61537313 | Msa1300110:intron | 40.0% |
| TAAACTTTAGCTGCCAATCC+TGG | - | chr8_3:61537345-61537364 | None:intergenic | 40.0% | |
| CAGCAAATAGCTTCAAACAC+AGG | - | chr8_3:61537536-61537555 | None:intergenic | 40.0% | |
| ! | GTGTTTGAAGCTATTTGCTG+AGG | + | chr8_3:61537536-61537555 | Msa1300110:intron | 40.0% |
| ATTAGGCCAAATTGCTCACT+TGG | + | chr8_3:61537821-61537840 | Msa1300110:intron | 40.0% | |
| AGGTAACCAAGTGAGCAATT+TGG | - | chr8_3:61537830-61537849 | None:intergenic | 40.0% | |
| TACCTATGCACAGAACTACT+CGG | + | chr8_3:61537845-61537864 | Msa1300110:intron | 40.0% | |
| ACAGAACTACTCGGAACAAA+TGG | + | chr8_3:61537854-61537873 | Msa1300110:intron | 40.0% | |
| CAGAACTACTCGGAACAAAT+GGG | + | chr8_3:61537855-61537874 | Msa1300110:intron | 40.0% | |
| !!! | AATTTTGCGAGCACTGAAAC+AGG | - | chr8_3:61538009-61538028 | None:intergenic | 40.0% |
| AAATGTCTTTGCATGTCACC+AGG | + | chr8_3:61538096-61538115 | Msa1300110:intron | 40.0% | |
| ATCCAATGATAGCACAAACC+TGG | - | chr8_3:61538117-61538136 | None:intergenic | 40.0% | |
| ACAAAGGCAGAAAGTTGACT+GGG | - | chr8_3:61538151-61538170 | None:intergenic | 40.0% | |
| CAACTTTCTGCCTTTGTCAA+TGG | + | chr8_3:61538154-61538173 | Msa1300110:three_prime_UTR | 40.0% | |
| !! | TGCCTCATTGACTTGATATG+TGG | + | chr8_3:61538351-61538370 | Msa1300110:three_prime_UTR | 40.0% |
| AAATGTAGATGCTGCATGGT+TGG | - | chr8_3:61538472-61538491 | None:intergenic | 40.0% | |
| ! | ACCATGCAGCATCTACATTT+TGG | + | chr8_3:61538472-61538491 | Msa1300110:three_prime_UTR | 40.0% |
| TCCAAAATGTAGATGCTGCA+TGG | - | chr8_3:61538476-61538495 | None:intergenic | 40.0% | |
| AGAAGAATGAGGCAACATAG+AGG | - | chr8_3:61538609-61538628 | None:intergenic | 40.0% | |
| ATGCGAATGGAATGGAGATG+GGG | - | chr8_3:61534900-61534919 | None:intergenic | 45.0% | |
| GATGCGAATGGAATGGAGAT+GGG | - | chr8_3:61534901-61534920 | None:intergenic | 45.0% | |
| GATTCTCGATGCGAATGGAA+TGG | - | chr8_3:61534908-61534927 | None:intergenic | 45.0% | |
| TTTCAGCTTCTGCAATAGGG+AGG | - | chr8_3:61534957-61534976 | None:intergenic | 45.0% | |
| ! | AAAGCTTCATCAAAGCGCCA+TGG | + | chr8_3:61534975-61534994 | Msa1300110:CDS | 45.0% |
| ! | AAGCTTCATCAAAGCGCCAT+GGG | + | chr8_3:61534976-61534995 | Msa1300110:CDS | 45.0% |
| TTTGAATTCGGGGTGGGAAA+CGG | - | chr8_3:61535014-61535033 | None:intergenic | 45.0% | |
| ! | GTAAGGCGGATTTGAATTCG+GGG | - | chr8_3:61535024-61535043 | None:intergenic | 45.0% |
| ! | GGTAAGGCGGATTTGAATTC+GGG | - | chr8_3:61535025-61535044 | None:intergenic | 45.0% |
| ! | GGGTAAGGCGGATTTGAATT+CGG | - | chr8_3:61535026-61535045 | None:intergenic | 45.0% |
| GAATTCAAATCCGCCTTACC+CGG | + | chr8_3:61535025-61535044 | Msa1300110:CDS | 45.0% | |
| CTTGTAGATGGTGCGAACAA+TGG | - | chr8_3:61535176-61535195 | None:intergenic | 45.0% | |
| GAAGAGGATATGAATGCTCG+TGG | + | chr8_3:61535277-61535296 | Msa1300110:CDS | 45.0% | |
| AAACATCACTGTTGCGGTGT+TGG | - | chr8_3:61535699-61535718 | None:intergenic | 45.0% | |
| AAGAAGAGTCACAGTAGTGG+AGG | + | chr8_3:61535810-61535829 | Msa1300110:intron | 45.0% | |
| AGTGACGAGTTAAGTAGAGG+AGG | + | chr8_3:61535880-61535899 | Msa1300110:intron | 45.0% | |
| TATAGTGTGGGTAAGAGAGC+GGG | + | chr8_3:61536385-61536404 | Msa1300110:intron | 45.0% | |
| ! | TTTTCCCAACTGCAGGAATG+GGG | + | chr8_3:61536475-61536494 | Msa1300110:intron | 45.0% |
| GCAAGGTATAGCCGTGTATA+TGG | - | chr8_3:61536554-61536573 | None:intergenic | 45.0% | |
| ! | CAGATGATTTGGGCCCAAAA+GGG | - | chr8_3:61536839-61536858 | None:intergenic | 45.0% |
| ! | ACAGATGATTTGGGCCCAAA+AGG | - | chr8_3:61536840-61536859 | None:intergenic | 45.0% |
| TGTCGCTCAGTTGTTCTGTT+GGG | - | chr8_3:61536951-61536970 | None:intergenic | 45.0% | |
| TTGATCGTGATTGTGCGTCT+AGG | + | chr8_3:61537018-61537037 | Msa1300110:intron | 45.0% | |
| TGTGCGTCTAGGCAATGAAA+AGG | + | chr8_3:61537029-61537048 | Msa1300110:intron | 45.0% | |
| TAACAGCCAAGAACTCTCCA+TGG | - | chr8_3:61537080-61537099 | None:intergenic | 45.0% | |
| TGGAGAGTTCTTGGCTGTTA+AGG | + | chr8_3:61537080-61537099 | Msa1300110:intron | 45.0% | |
| GCCCCAAAAACACTATAGCA+GGG | - | chr8_3:61537298-61537317 | None:intergenic | 45.0% | |
| AGCCCCAAAAACACTATAGC+AGG | - | chr8_3:61537299-61537318 | None:intergenic | 45.0% | |
| !!! | TGCTATAGTGTTTTTGGGGC+TGG | + | chr8_3:61537298-61537317 | Msa1300110:intron | 45.0% |
| CACATTTATCCAGCCAGGAT+TGG | + | chr8_3:61537329-61537348 | Msa1300110:intron | 45.0% | |
| GCTTCAAACACAGGTAGGAA+TGG | - | chr8_3:61537527-61537546 | None:intergenic | 45.0% | |
| ! | CATATAGGCGATTTGCTCAC+TGG | + | chr8_3:61537633-61537652 | Msa1300110:intron | 45.0% |
| ! | TTCCGAGTAGTTCTGTGCAT+AGG | - | chr8_3:61537850-61537869 | None:intergenic | 45.0% |
| CACCAGGTTTGTGCTATCAT+TGG | + | chr8_3:61538112-61538131 | Msa1300110:intron | 45.0% | |
| GACAAAGGCAGAAAGTTGAC+TGG | - | chr8_3:61538152-61538171 | None:intergenic | 45.0% | |
| TTCTGCCTTTGTCAATGGGA+AGG | + | chr8_3:61538159-61538178 | Msa1300110:three_prime_UTR | 45.0% | |
| TCAGACCTTCCCATTGACAA+AGG | - | chr8_3:61538167-61538186 | None:intergenic | 45.0% | |
| ATTTCAAAGTCTCTCCACGG+TGG | + | chr8_3:61538438-61538457 | Msa1300110:three_prime_UTR | 45.0% | |
| AAACTCTTGCGCGAAGAATC+AGG | - | chr8_3:61538549-61538568 | None:intergenic | 45.0% | |
| TCGTGCACTGTTCAATGTTC+AGG | + | chr8_3:61538661-61538680 | Msa1300110:three_prime_UTR | 45.0% | |
| CGTGCACTGTTCAATGTTCA+GGG | + | chr8_3:61538662-61538681 | Msa1300110:three_prime_UTR | 45.0% | |
| CGATGCGAATGGAATGGAGA+TGG | - | chr8_3:61534902-61534921 | None:intergenic | 50.0% | |
| CTTCTGCAATAGGGAGGATG+GGG | - | chr8_3:61534951-61534970 | None:intergenic | 50.0% | |
| GCTTCTGCAATAGGGAGGAT+GGG | - | chr8_3:61534952-61534971 | None:intergenic | 50.0% | |
| AGCTTCTGCAATAGGGAGGA+TGG | - | chr8_3:61534953-61534972 | None:intergenic | 50.0% | |
| ! | AAAGCGCCATGGGAGATAAC+AGG | + | chr8_3:61534986-61535005 | Msa1300110:CDS | 50.0% |
| TTGAATTCGGGGTGGGAAAC+GGG | - | chr8_3:61535013-61535032 | None:intergenic | 50.0% | |
| !!! | CTTTTTCCTTGGTAGTGGCG+GGG | - | chr8_3:61535075-61535094 | None:intergenic | 50.0% |
| !!! | GCTTTTTCCTTGGTAGTGGC+GGG | - | chr8_3:61535076-61535095 | None:intergenic | 50.0% |
| !!! | CGCTTTTTCCTTGGTAGTGG+CGG | - | chr8_3:61535077-61535096 | None:intergenic | 50.0% |
| ! | ACGGTTTCTGGATCGGAAGT+TGG | - | chr8_3:61535106-61535125 | None:intergenic | 50.0% |
| TAGATGGTGCGAACAATGGG+AGG | - | chr8_3:61535172-61535191 | None:intergenic | 50.0% | |
| GAGGATATGAATGCTCGTGG+CGG | + | chr8_3:61535280-61535299 | Msa1300110:CDS | 50.0% | |
| GGCGGTGGTTACCAATCTTA+AGG | + | chr8_3:61535298-61535317 | Msa1300110:CDS | 50.0% | |
| TTCTGGACCCCATACTTGAG+TGG | - | chr8_3:61536438-61536457 | None:intergenic | 50.0% | |
| TGATCCCCATTCCTGCAGTT+GGG | - | chr8_3:61536482-61536501 | None:intergenic | 50.0% | |
| TGCAGGAATGGGGATCAGAT+GGG | + | chr8_3:61536485-61536504 | Msa1300110:intron | 50.0% | |
| TGGTTGTGACAGAGATGAGG+TGG | - | chr8_3:61536928-61536947 | None:intergenic | 50.0% | |
| CTGTCGCTCAGTTGTTCTGT+TGG | - | chr8_3:61536952-61536971 | None:intergenic | 50.0% | |
| CTTCTGCCATGGAGAGTTCT+TGG | + | chr8_3:61537071-61537090 | Msa1300110:intron | 50.0% | |
| ! | TAAGGGGAGCTTTGACCCAA+CGG | - | chr8_3:61537176-61537195 | None:intergenic | 50.0% |
| CTCTGCACATTTATCCAGCC+AGG | + | chr8_3:61537324-61537343 | Msa1300110:intron | 50.0% | |
| ACGGGTCCTGTTATCTCCCA+TGG | - | chr8_3:61534995-61535014 | None:intergenic | 55.0% | |
| ! | GGCGGATTTGAATTCGGGGT+GGG | - | chr8_3:61535020-61535039 | None:intergenic | 55.0% |
| ! | AGGCGGATTTGAATTCGGGG+TGG | - | chr8_3:61535021-61535040 | None:intergenic | 55.0% |
| GTAATCGAGTGCTCCGGGTA+AGG | - | chr8_3:61535041-61535060 | None:intergenic | 55.0% | |
| !! | TTGGTAGTGGCGGGGCAATA+GGG | - | chr8_3:61535067-61535086 | None:intergenic | 55.0% |
| GAACAATGGGAGGACGGTTG+CGG | - | chr8_3:61535162-61535181 | None:intergenic | 55.0% | |
| TGGTGCGAACAATGGGAGGA+CGG | - | chr8_3:61535168-61535187 | None:intergenic | 55.0% | |
| GATATGAATGCTCGTGGCGG+TGG | + | chr8_3:61535283-61535302 | Msa1300110:CDS | 55.0% | |
| TGTGGGTAAGAGAGCGGGTA+TGG | + | chr8_3:61536390-61536409 | Msa1300110:intron | 55.0% | |
| CTGATCCCCATTCCTGCAGT+TGG | - | chr8_3:61536483-61536502 | None:intergenic | 55.0% | |
| CTGCAGGAATGGGGATCAGA+TGG | + | chr8_3:61536484-61536503 | Msa1300110:intron | 55.0% | |
| GGGTGGTTGTGACAGAGATG+AGG | - | chr8_3:61536931-61536950 | None:intergenic | 55.0% | |
| CGCTCAGTTGTTCTGTTGGG+TGG | - | chr8_3:61536948-61536967 | None:intergenic | 55.0% | |
| TAGGCAGCAACCACAACCGT+TGG | + | chr8_3:61537157-61537176 | Msa1300110:intron | 55.0% | |
| AGGCAGCAACCACAACCGTT+GGG | + | chr8_3:61537158-61537177 | Msa1300110:intron | 55.0% | |
| ! | GAGCTTTGACCCAACGGTTG+TGG | - | chr8_3:61537170-61537189 | None:intergenic | 55.0% |
| CTTTAGCTGCCAATCCTGGC+TGG | - | chr8_3:61537341-61537360 | None:intergenic | 55.0% | |
| ! | GGTTGGTTGTTTAGCCACCG+TGG | - | chr8_3:61538455-61538474 | None:intergenic | 55.0% |
| GGAGGATGGGGATTTCGCCA+TGG | - | chr8_3:61534939-61534958 | None:intergenic | 60.0% | |
| ATCGAGTGCTCCGGGTAAGG+CGG | - | chr8_3:61535038-61535057 | None:intergenic | 60.0% | |
| GGACGGTAATCGAGTGCTCC+GGG | - | chr8_3:61535046-61535065 | None:intergenic | 60.0% | |
| GGGACGGTAATCGAGTGCTC+CGG | - | chr8_3:61535047-61535066 | None:intergenic | 60.0% | |
| ! | TAGTGGCGGGGCAATAGGGA+CGG | - | chr8_3:61535063-61535082 | None:intergenic | 60.0% |
| !! | CTTGGTAGTGGCGGGGCAAT+AGG | - | chr8_3:61535068-61535087 | None:intergenic | 60.0% |
| CTATTGCCCCGCCACTACCA+AGG | + | chr8_3:61535066-61535085 | Msa1300110:CDS | 60.0% | |
| !! | ACGGTTGCGGCGTTGATCAC+GGG | - | chr8_3:61535149-61535168 | None:intergenic | 60.0% |
| !! | GACGGTTGCGGCGTTGATCA+CGG | - | chr8_3:61535150-61535169 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61534869 | 61538710 | 61534869 | ID=Msa1300110;Name=Msa1300110 |
| chr8_3 | mRNA | 61534869 | 61538710 | 61534869 | ID=Msa1300110-mRNA-1;Parent=Msa1300110;Name=Msa1300110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=69|0|0.5|1|0|0.5|2|593|126 |
| chr8_3 | exon | 61534869 | 61535318 | 61534869 | ID=Msa1300110-mRNA-1:exon:18144;Parent=Msa1300110-mRNA-1 |
| chr8_3 | exon | 61538118 | 61538710 | 61538118 | ID=Msa1300110-mRNA-1:exon:18145;Parent=Msa1300110-mRNA-1 |
| chr8_3 | five_prime_UTR | 61534869 | 61534937 | 61534869 | ID=Msa1300110-mRNA-1:five_prime_utr;Parent=Msa1300110-mRNA-1 |
| chr8_3 | CDS | 61534938 | 61535318 | 61534938 | ID=Msa1300110-mRNA-1:cds;Parent=Msa1300110-mRNA-1 |
| chr8_3 | three_prime_UTR | 61538118 | 61538710 | 61538118 | ID=Msa1300110-mRNA-1:three_prime_utr;Parent=Msa1300110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
