Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213080 | sp|Q9FZ81|RBL12_ARATH | 60.662 | 272 | 93 | 5 | 65 | 329 | 70 | 334 | 4.77e-97 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213080 | A0A072V1P2 | 93.313 | 329 | 18 | 1 | 1 | 329 | 1 | 325 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0061080 | Msa1213080 | 0.801838 | 7.453854e-49 | -8.615850e-47 |
| Msa0643570 | Msa1213080 | 0.811442 | 6.987297e-51 | -8.615850e-47 |
| Msa0391320 | Msa1213080 | 0.818533 | 1.865582e-52 | -8.615850e-47 |
| Msa0402650 | Msa1213080 | 0.808106 | 3.645873e-50 | -8.615850e-47 |
| Msa1213080 | Msa1213190 | 0.837893 | 3.972921e-57 | -8.615850e-47 |
| Msa1213080 | Msa1225700 | 0.828890 | 6.988701e-55 | -8.615850e-47 |
| Msa1213080 | Msa1446950 | 0.813099 | 3.037604e-51 | -8.615850e-47 |
| Msa0602690 | Msa1213080 | 0.810894 | 9.184989e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213080 | MtrunA17_Chr4g0061591 | 93.313 | 329 | 18 | 1 | 1 | 329 | 1 | 325 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213080 | AT1G18600.1 | 60.662 | 272 | 93 | 5 | 65 | 329 | 70 | 334 | 4.85e-98 | 293 |
| Msa1213080 | AT1G74130.1 | 35.161 | 310 | 167 | 10 | 34 | 329 | 31 | 320 | 1.56e-52 | 176 |
| Msa1213080 | AT1G74140.5 | 40.090 | 222 | 112 | 7 | 118 | 329 | 110 | 320 | 9.58e-43 | 150 |
| Msa1213080 | AT1G74140.1 | 40.991 | 222 | 107 | 8 | 118 | 329 | 110 | 317 | 3.03e-42 | 149 |
| Msa1213080 | AT1G74130.2 | 33.692 | 279 | 153 | 9 | 34 | 300 | 31 | 289 | 1.72e-41 | 146 |
| Msa1213080 | AT1G74140.4 | 39.091 | 220 | 103 | 7 | 118 | 329 | 110 | 306 | 3.63e-39 | 140 |
| Msa1213080 | AT1G74140.3 | 37.838 | 222 | 98 | 8 | 118 | 329 | 110 | 301 | 9.50e-32 | 120 |
| Msa1213080 | AT1G74140.2 | 37.838 | 222 | 95 | 8 | 118 | 329 | 110 | 298 | 3.10e-31 | 119 |
Find 95 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAGATTGCAAGTAAATT+TGG | 0.127860 | 8_1:-73123501 | Msa1213080:intron |
| AGCAATTTCCTTAAATAAAA+TGG | 0.190591 | 8_1:+73121291 | None:intergenic |
| TATAAATTAGGTGAAGTTAT+TGG | 0.218495 | 8_1:-73121466 | Msa1213080:three_prime_UTR |
| TTAATTAGCAACTATAAATT+AGG | 0.220500 | 8_1:-73121478 | Msa1213080:three_prime_UTR |
| ATGCTTGGACTCTACTTCTT+TGG | 0.221067 | 8_1:-73124579 | Msa1213080:CDS |
| GGAGAAAGAGGAACGAATTT+TGG | 0.227418 | 8_1:+73125943 | None:intergenic |
| GACACCAGATGACGTGGTTC+TGG | 0.230010 | 8_1:-73125267 | Msa1213080:CDS |
| GACAGAACTACATTTCAAAT+TGG | 0.283737 | 8_1:-73125838 | Msa1213080:CDS |
| ATAAATTAGGTGAAGTTATT+GGG | 0.293281 | 8_1:-73121465 | Msa1213080:three_prime_UTR |
| TGAAGGTGAGGTTGGGTTGA+AGG | 0.308866 | 8_1:+73126080 | None:intergenic |
| ACCAGTTCCTGCGGCGTTGC+TGG | 0.311615 | 8_1:-73122401 | Msa1213080:intron |
| CTATATCTTGCTGGCGCAAT+TGG | 0.317104 | 8_1:-73123459 | Msa1213080:CDS |
| TATAGCTTCAGCAGAAATTC+AGG | 0.326477 | 8_1:+73123477 | None:intergenic |
| ATCAGATTGCAAGTAAATTT+GGG | 0.330197 | 8_1:-73123500 | Msa1213080:intron |
| TTTCTGTTCACAGATCTCTT+TGG | 0.344886 | 8_1:-73124682 | Msa1213080:intron |
| CTTTGATGTTAGAGACTTGT+AGG | 0.345445 | 8_1:+73123407 | None:intergenic |
| GCAGGAGATTGTGGCTAAAC+AGG | 0.348440 | 8_1:-73125292 | Msa1213080:intron |
| GCTACGATCAATGACGCTTT+TGG | 0.350177 | 8_1:+73125883 | None:intergenic |
| CTGCTGAAGCTATATCTTGC+TGG | 0.359474 | 8_1:-73123468 | Msa1213080:CDS |
| GATATCAGGATCTGCACATT+TGG | 0.362814 | 8_1:-73121629 | Msa1213080:CDS |
| GTGGTTTAGATTGGAGGGTT+GGG | 0.368070 | 8_1:+73126015 | None:intergenic |
| GGTGGTGATGGTGGTGGTGG+TGG | 0.368231 | 8_1:+73126104 | None:intergenic |
| GGTGGTGGTGATGGTGGTGG+TGG | 0.370901 | 8_1:+73126101 | None:intergenic |
| GTGAGGGTTGAAGGTGAGGT+TGG | 0.371478 | 8_1:+73126072 | None:intergenic |
| TAGGGAGACAGTGCGATATC+AGG | 0.388761 | 8_1:-73121643 | Msa1213080:CDS |
| TTCAAGTATATAGTTGCTCT+TGG | 0.389439 | 8_1:+73122433 | None:intergenic |
| TGGGTTGAAGGTGGTGGTGA+TGG | 0.399192 | 8_1:+73126092 | None:intergenic |
| ACACCAGATGACGTGGTTCT+GGG | 0.403748 | 8_1:-73125266 | Msa1213080:CDS |
| GAAGGTGGTGGTGATGGTGG+TGG | 0.409502 | 8_1:+73126098 | None:intergenic |
| CATTTAATGTCCAACATGCT+TGG | 0.418509 | 8_1:-73124594 | Msa1213080:CDS |
| AGGAATGTGGTGGTTTAGAT+TGG | 0.427442 | 8_1:+73126006 | None:intergenic |
| GGAGATACGGTGAGGGTTGA+AGG | 0.429536 | 8_1:+73126063 | None:intergenic |
| AACCCCAGAACCACGTCATC+TGG | 0.431625 | 8_1:+73125263 | None:intergenic |
| CTGTCGATGAAAATGAACTC+TGG | 0.434382 | 8_1:+73125856 | None:intergenic |
| TGAGGGTTGAAGGTGAGGTT+GGG | 0.435029 | 8_1:+73126073 | None:intergenic |
| ACCAGCAACGCCGCAGGAAC+TGG | 0.440265 | 8_1:+73122400 | None:intergenic |
| GCTCGCGGTGTCAATGTAGT+TGG | 0.442848 | 8_1:-73121347 | Msa1213080:three_prime_UTR |
| TTCTTCGAAAGATCATTGAT+TGG | 0.447627 | 8_1:+73125921 | None:intergenic |
| ATATCAGGATCTGCACATTT+GGG | 0.448175 | 8_1:-73121628 | Msa1213080:CDS |
| TCTTCGAAAGATCATTGATT+GGG | 0.451663 | 8_1:+73125922 | None:intergenic |
| GGTGGTTTAGATTGGAGGGT+TGG | 0.457213 | 8_1:+73126014 | None:intergenic |
| CCATAGCATGGTCAAGAGTT+CGG | 0.457547 | 8_1:-73121588 | Msa1213080:CDS |
| CTTCTTCCGCCATTCACTCA+TGG | 0.466264 | 8_1:-73125979 | Msa1213080:CDS |
| TCTTGTTTGCAACAGGGCTA+TGG | 0.467231 | 8_1:-73123041 | Msa1213080:intron |
| GTTGAAGGTGGTGGTGATGG+TGG | 0.469867 | 8_1:+73126095 | None:intergenic |
| TATCTTGCTGGCGCAATTGG+TGG | 0.476126 | 8_1:-73123456 | Msa1213080:CDS |
| TGAGGTTGGGTTGAAGGTGG+TGG | 0.481407 | 8_1:+73126086 | None:intergenic |
| GAGCTTAGTTCGGCGGTTCA+CGG | 0.483010 | 8_1:-73126146 | Msa1213080:CDS |
| AGGTGAGGTTGGGTTGAAGG+TGG | 0.483066 | 8_1:+73126083 | None:intergenic |
| GATCATTGATTGGGAGAAAG+AGG | 0.487060 | 8_1:+73125931 | None:intergenic |
| CTCGCGGTGTCAATGTAGTT+GGG | 0.489692 | 8_1:-73121346 | Msa1213080:three_prime_UTR |
| ATATAGTTGCTCTTGGATTG+AGG | 0.494470 | 8_1:+73122440 | None:intergenic |
| GGCTTCAAAGGATTTAGCAT+TGG | 0.497089 | 8_1:-73123009 | Msa1213080:intron |
| AATGTGGTGGTTTAGATTGG+AGG | 0.509707 | 8_1:+73126009 | None:intergenic |
| CAAAAGAATTGAAATAGAGT+AGG | 0.510885 | 8_1:+73121318 | None:intergenic |
| ACAGGGCTATGGAGCGATCA+AGG | 0.511350 | 8_1:-73123030 | Msa1213080:intron |
| TGTCGATGAAAATGAACTCT+GGG | 0.511770 | 8_1:+73125857 | None:intergenic |
| TACGGTGAGGGTTGAAGGTG+AGG | 0.512141 | 8_1:+73126068 | None:intergenic |
| AAGGGAACGCCATGAGTGAA+TGG | 0.517164 | 8_1:+73125970 | None:intergenic |
| CCGAACTCTTGACCATGCTA+TGG | 0.521181 | 8_1:+73121588 | None:intergenic |
| ATGTGGTGGTTTAGATTGGA+GGG | 0.523563 | 8_1:+73126010 | None:intergenic |
| CATGTTGGACATTAAATGCC+AGG | 0.532362 | 8_1:+73124599 | None:intergenic |
| GGTTGGGCGATGTGAGTTGA+AGG | 0.532991 | 8_1:+73126031 | None:intergenic |
| CATGAGTGAATGGCGGAAGA+AGG | 0.533160 | 8_1:+73125980 | None:intergenic |
| CGGAAGAAGGTGAAGGAATG+TGG | 0.536318 | 8_1:+73125993 | None:intergenic |
| TCCAATGATTAGGGAGCAAG+TGG | 0.538219 | 8_1:-73122496 | Msa1213080:intron |
| CATTCAGTCATGTAGATGCC+TGG | 0.544602 | 8_1:-73124617 | Msa1213080:CDS |
| AAGGACGAGTGTGGGAGATA+CGG | 0.554278 | 8_1:+73126050 | None:intergenic |
| AAAAGAATTGAAATAGAGTA+GGG | 0.554411 | 8_1:+73121319 | None:intergenic |
| AGATATGCTGAGGATAATAG+AGG | 0.557356 | 8_1:-73122258 | Msa1213080:intron |
| ATAATTCGTATCGGAGTGGT+TGG | 0.559072 | 8_1:-73125811 | Msa1213080:intron |
| CTACAAGTCTCTAACATCAA+AGG | 0.563755 | 8_1:-73123406 | Msa1213080:intron |
| GAAGTAGAGTCCAAGCATGT+TGG | 0.565236 | 8_1:+73124584 | None:intergenic |
| CAGCTTACCAGCAACGCCGC+AGG | 0.572037 | 8_1:+73122394 | None:intergenic |
| TGGAGCGATCAAGGCTTCAA+AGG | 0.573750 | 8_1:-73123021 | Msa1213080:CDS |
| ATCTACATGACTGAATGCAT+TGG | 0.587624 | 8_1:+73124623 | None:intergenic |
| TGATCGGAAAAGATATGCTG+AGG | 0.592421 | 8_1:-73122268 | Msa1213080:CDS |
| ATTGGAATAATAATTCGTAT+CGG | 0.595875 | 8_1:-73125820 | Msa1213080:CDS |
| TCTTTGGACAATATTAAGAG+TGG | 0.600813 | 8_1:-73124666 | Msa1213080:CDS |
| CACCAGATGACGTGGTTCTG+GGG | 0.602466 | 8_1:-73125265 | Msa1213080:CDS |
| TTGCAGTTGCAGCCATAGCA+TGG | 0.613540 | 8_1:-73121600 | Msa1213080:CDS |
| TCAGGATCTGCACATTTGGG+TGG | 0.628970 | 8_1:-73121625 | Msa1213080:CDS |
| CAGGCTGACACCAGATGACG+TGG | 0.635192 | 8_1:-73125273 | Msa1213080:CDS |
| AAATGCAGAGCTTAGTTCGG+CGG | 0.641989 | 8_1:-73126153 | Msa1213080:CDS |
| AATAATAATTCGTATCGGAG+TGG | 0.642796 | 8_1:-73125815 | Msa1213080:CDS |
| AAGAAGGTGAAGGAATGTGG+TGG | 0.648391 | 8_1:+73125996 | None:intergenic |
| GTGAGTTGAAGGACGAGTGT+GGG | 0.670836 | 8_1:+73126042 | None:intergenic |
| TATGAACATACTAGTGCTCG+CGG | 0.677818 | 8_1:-73121362 | Msa1213080:three_prime_UTR |
| TGAATGGCGGAAGAAGGTGA+AGG | 0.678778 | 8_1:+73125986 | None:intergenic |
| GCATGGTCAAGAGTTCGGAA+AGG | 0.680049 | 8_1:-73121583 | Msa1213080:CDS |
| CGAGTGTGGGAGATACGGTG+AGG | 0.681414 | 8_1:+73126055 | None:intergenic |
| TGTGAGTTGAAGGACGAGTG+TGG | 0.689784 | 8_1:+73126041 | None:intergenic |
| GAGTGTGGGAGATACGGTGA+GGG | 0.708234 | 8_1:+73126056 | None:intergenic |
| GGAACGCCATGAGTGAATGG+CGG | 0.713842 | 8_1:+73125973 | None:intergenic |
| CTTAGTTCGGCGGTTCACGG+CGG | 0.738046 | 8_1:-73126143 | Msa1213080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTATTAAA+AGG | + | chr8_1:73125687-73125706 | None:intergenic | 0.0% |
| !! | AAAACAAAATATTATTACTA+AGG | + | chr8_1:73122994-73123013 | None:intergenic | 10.0% |
| !!! | TAGTAATAATATTTTGTTTT+AGG | - | chr8_1:73122994-73123013 | Msa1213080:intron | 10.0% |
| !!! | TTTCTTTTTAAAAAAAATTC+TGG | - | chr8_1:73124132-73124151 | Msa1213080:intron | 10.0% |
| !!! | TTCTTTTTAAAAAAAATTCT+GGG | - | chr8_1:73124133-73124152 | Msa1213080:intron | 10.0% |
| !!! | AAAAAAAAACTTGATAATAA+GGG | + | chr8_1:73124879-73124898 | None:intergenic | 10.0% |
| !! | TTTATTAAAAGGAAAAATAA+AGG | + | chr8_1:73125575-73125594 | None:intergenic | 10.0% |
| !! | TTTATTAAAAGGAAAAATAA+AGG | + | chr8_1:73125575-73125594 | None:intergenic | 10.0% |
| !!! | TCAATTTTGTCATTATAATT+TGG | - | chr8_1:73121741-73121760 | Msa1213080:intron | 15.0% |
| !!! | AAGATTGAAATTTTCAAATT+TGG | + | chr8_1:73121844-73121863 | None:intergenic | 15.0% |
| !! | ATAAATAGTGATTACTAATA+AGG | + | chr8_1:73121886-73121905 | None:intergenic | 15.0% |
| !! | ATGTTGTTAAATAAAAATCA+GGG | + | chr8_1:73121935-73121954 | None:intergenic | 15.0% |
| !! | AAAATATTATTACTAAGGTA+AGG | + | chr8_1:73122989-73123008 | None:intergenic | 15.0% |
| !!! | AATAATATTTTGTTTTAGGT+TGG | - | chr8_1:73122998-73123017 | Msa1213080:intron | 15.0% |
| !!! | ACTTATTATTCTTTGTTTTA+TGG | + | chr8_1:73123047-73123066 | None:intergenic | 15.0% |
| !! | AATAAAACATATTAATCAGA+AGG | + | chr8_1:73123546-73123565 | None:intergenic | 15.0% |
| !!! | TTATTCATTTTATAACTTCT+TGG | - | chr8_1:73123561-73123580 | Msa1213080:intron | 15.0% |
| !!! | TAAAAAGAAAGTTTTAGAAT+TGG | + | chr8_1:73124122-73124141 | None:intergenic | 15.0% |
| !! | ATTCAAAAATCAAATTGAAT+AGG | - | chr8_1:73124655-73124674 | Msa1213080:CDS | 15.0% |
| !!! | ACATAATTTAAAACCTAAAA+TGG | + | chr8_1:73124698-73124717 | None:intergenic | 15.0% |
| !!! | CAAAAAAAAACTTGATAATA+AGG | + | chr8_1:73124880-73124899 | None:intergenic | 15.0% |
| !! | CTAACATTATAAATAATTGT+TGG | - | chr8_1:73125792-73125811 | Msa1213080:intron | 15.0% |
| !! | TTAATTAGCAACTATAAATT+AGG | - | chr8_1:73125991-73126010 | Msa1213080:CDS | 15.0% |
| !! | ATTGGAATAATAATTCGTAT+CGG | - | chr8_1:73121649-73121668 | Msa1213080:intron | 20.0% |
| !! | GATGTTGTTAAATAAAAATC+AGG | + | chr8_1:73121936-73121955 | None:intergenic | 20.0% |
| !!! | TCATTTTCTTAAATTACAAC+CGG | + | chr8_1:73122013-73122032 | None:intergenic | 20.0% |
| !!! | ATGTTGCTGTTTTTTTATTT+TGG | - | chr8_1:73122240-73122259 | Msa1213080:intron | 20.0% |
| !! | ATTTGATAAACCAAAATAAC+AGG | + | chr8_1:73122391-73122410 | None:intergenic | 20.0% |
| !!! | TGTATAATTTGTATTATTGC+AGG | - | chr8_1:73122438-73122457 | Msa1213080:CDS | 20.0% |
| !! | TGATCTATTACTATTATCTT+TGG | - | chr8_1:73122465-73122484 | Msa1213080:CDS | 20.0% |
| !! | TTCTATCCTCAATAAAAATA+AGG | + | chr8_1:73122510-73122529 | None:intergenic | 20.0% |
| !! | TGTCATTCAACTAAAATATT+AGG | + | chr8_1:73122585-73122604 | None:intergenic | 20.0% |
| !! | ATCAAATTAGTAATTGTTTC+TGG | - | chr8_1:73122661-73122680 | Msa1213080:intron | 20.0% |
| !! | ACAAAGAATAATAAGTCATA+TGG | - | chr8_1:73123051-73123070 | Msa1213080:intron | 20.0% |
| !!! | AAAAAATATCTGAAGTTCTT+AGG | - | chr8_1:73123137-73123156 | Msa1213080:intron | 20.0% |
| !!! | ATGTTTTCTCTTTAATTTTC+TGG | - | chr8_1:73123459-73123478 | Msa1213080:CDS | 20.0% |
| !!! | TGTTTTCTCTTTAATTTTCT+GGG | - | chr8_1:73123460-73123479 | Msa1213080:CDS | 20.0% |
| !! | GAAAAGGAAAAATATGAAAT+AGG | + | chr8_1:73123503-73123522 | None:intergenic | 20.0% |
| !!! | ATTTTTCCTTTTCTTTTTGT+AGG | - | chr8_1:73123510-73123529 | Msa1213080:intron | 20.0% |
| !! | AAAGTTAATATTTACACTCT+TGG | - | chr8_1:73124321-73124340 | Msa1213080:intron | 20.0% |
| !! | AATTGTGTAAATAAGTTTCA+TGG | - | chr8_1:73124734-73124753 | Msa1213080:intron | 20.0% |
| !! | ATACAGAAATTTCATAACAA+TGG | + | chr8_1:73125446-73125465 | None:intergenic | 20.0% |
| !!! | AAAAACAAAGCATTAACATT+TGG | - | chr8_1:73125769-73125788 | Msa1213080:intron | 20.0% |
| !! | TATAAATTAGGTGAAGTTAT+TGG | - | chr8_1:73126003-73126022 | Msa1213080:CDS | 20.0% |
| !! | ATAAATTAGGTGAAGTTATT+GGG | - | chr8_1:73126004-73126023 | Msa1213080:CDS | 20.0% |
| !! | AAAAGAATTGAAATAGAGTA+GGG | + | chr8_1:73126153-73126172 | None:intergenic | 20.0% |
| !! | AGCAATTTCCTTAAATAAAA+TGG | + | chr8_1:73126181-73126200 | None:intergenic | 20.0% |
| ! | TCAGATTGTAAACAAATGAA+CGG | + | chr8_1:73121709-73121728 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAGGGTTTATGA+GGG | - | chr8_1:73121770-73121789 | Msa1213080:intron | 25.0% |
| ! | TTTCAAATTTGGTAAAATCC+AGG | + | chr8_1:73121833-73121852 | None:intergenic | 25.0% |
| !!! | ATATAATTTGTCCTTTTTGC+AGG | - | chr8_1:73122159-73122178 | Msa1213080:intron | 25.0% |
| ! | TTACATATAAAGCAGATCTA+GGG | + | chr8_1:73122362-73122381 | None:intergenic | 25.0% |
| ! | TGGTTTATCAAATGTTTCTT+AGG | - | chr8_1:73122398-73122417 | Msa1213080:intron | 25.0% |
| !!! | CTGTTACCTTATTTTTATTG+AGG | - | chr8_1:73122501-73122520 | Msa1213080:intron | 25.0% |
| ! | TTATTACTAAGGTAAGGAAA+AGG | + | chr8_1:73122983-73123002 | None:intergenic | 25.0% |
| ! | AGTCATATGGTTATGAAATT+TGG | - | chr8_1:73123064-73123083 | Msa1213080:intron | 25.0% |
| ! | TCTCTTGAAAATTGTTTGTT+TGG | - | chr8_1:73123223-73123242 | Msa1213080:intron | 25.0% |
| ! | AATCTAAAGACAAAAGTGAT+TGG | + | chr8_1:73123378-73123397 | None:intergenic | 25.0% |
| ! | CATAAACCTACAAAAAGAAA+AGG | + | chr8_1:73123519-73123538 | None:intergenic | 25.0% |
| ! | AAGTACTATCTACTAATTGT+TGG | - | chr8_1:73123653-73123672 | Msa1213080:intron | 25.0% |
| ! | AGTACTATCTACTAATTGTT+GGG | - | chr8_1:73123654-73123673 | Msa1213080:intron | 25.0% |
| ! | ATCAGTAATATGAGAATTGA+GGG | + | chr8_1:73123729-73123748 | None:intergenic | 25.0% |
| ! | TATCAGTAATATGAGAATTG+AGG | + | chr8_1:73123730-73123749 | None:intergenic | 25.0% |
| !!! | TCATTTATTTGCCTACTTTT+TGG | - | chr8_1:73123793-73123812 | Msa1213080:intron | 25.0% |
| ! | TGCAGAGAAAAACAAATAAA+TGG | + | chr8_1:73123892-73123911 | None:intergenic | 25.0% |
| ! | TTAAAGGTTAATGAAGCTAA+TGG | + | chr8_1:73123929-73123948 | None:intergenic | 25.0% |
| ! | ATCAGATTGCAAGTAAATTT+GGG | - | chr8_1:73123969-73123988 | Msa1213080:intron | 25.0% |
| ! | TATGTAATTACTGATGTTCT+TGG | - | chr8_1:73124542-73124561 | Msa1213080:intron | 25.0% |
| ! | AACCTAAAATGGAATTTATG+AGG | + | chr8_1:73124687-73124706 | None:intergenic | 25.0% |
| ! | TTTAAATTATGTTTCCTCTG+TGG | - | chr8_1:73124706-73124725 | Msa1213080:intron | 25.0% |
| !!! | TTGTTAGTCTTCTTATAGTT+AGG | - | chr8_1:73124820-73124839 | Msa1213080:intron | 25.0% |
| ! | AAAAACTGAAATTTGCAAGT+TGG | - | chr8_1:73125119-73125138 | Msa1213080:intron | 25.0% |
| !! | ATTTTATTACACAGCAGAAA+AGG | + | chr8_1:73125157-73125176 | None:intergenic | 25.0% |
| ! | TCTGCTGTGTAATAAAATTA+TGG | - | chr8_1:73125159-73125178 | Msa1213080:intron | 25.0% |
| ! | AATAAAATTATGGCGAATCA+AGG | - | chr8_1:73125169-73125188 | Msa1213080:intron | 25.0% |
| ! | ATAAAATTATGGCGAATCAA+GGG | - | chr8_1:73125170-73125189 | Msa1213080:intron | 25.0% |
| ! | ATGGAAAATGCTATGAAAAA+AGG | + | chr8_1:73125284-73125303 | None:intergenic | 25.0% |
| ! | CTCGAAATTTGTAGAAATTA+TGG | + | chr8_1:73125376-73125395 | None:intergenic | 25.0% |
| !!! | TTAATGCTTTGTTTTTGAGA+AGG | + | chr8_1:73125765-73125784 | None:intergenic | 25.0% |
| !!! | ATTGTTGGTTTTCAAATTGT+AGG | - | chr8_1:73125807-73125826 | Msa1213080:intron | 25.0% |
| !!! | TTGTTGGTTTTCAAATTGTA+GGG | - | chr8_1:73125808-73125827 | Msa1213080:intron | 25.0% |
| !!! | AGAGTAAAAAACTTGTTTTG+CGG | + | chr8_1:73125938-73125957 | None:intergenic | 25.0% |
| ! | TCTGTCAAAAAGAAGTTATT+AGG | - | chr8_1:73126053-73126072 | Msa1213080:CDS | 25.0% |
| ! | CAAAAGAATTGAAATAGAGT+AGG | + | chr8_1:73126154-73126173 | None:intergenic | 25.0% |
| !!! | TTTGCATGCCATTTTATTTA+AGG | - | chr8_1:73126170-73126189 | Msa1213080:exon | 25.0% |
| ! | TCTTCGAAAGATCATTGATT+GGG | + | chr8_1:73121550-73121569 | None:intergenic | 30.0% |
| TTCTTCGAAAGATCATTGAT+TGG | + | chr8_1:73121551-73121570 | None:intergenic | 30.0% | |
| GACAGAACTACATTTCAAAT+TGG | - | chr8_1:73121631-73121650 | Msa1213080:CDS | 30.0% | |
| AATAATAATTCGTATCGGAG+TGG | - | chr8_1:73121654-73121673 | Msa1213080:intron | 30.0% | |
| CAGATTGTAAACAAATGAAC+GGG | + | chr8_1:73121708-73121727 | None:intergenic | 30.0% | |
| ! | TTTGGACTGAGATTTAGTTT+AGG | - | chr8_1:73121759-73121778 | Msa1213080:intron | 30.0% |
| ! | TTGGACTGAGATTTAGTTTA+GGG | - | chr8_1:73121760-73121779 | Msa1213080:intron | 30.0% |
| ! | GATTTAGTTTAGGGTTTATG+AGG | - | chr8_1:73121769-73121788 | Msa1213080:intron | 30.0% |
| ! | TTCATCTGTTATTTAACACC+TGG | - | chr8_1:73121812-73121831 | Msa1213080:intron | 30.0% |
| ! | TTAGGCTTTTACGTGTTATA+TGG | - | chr8_1:73122126-73122145 | Msa1213080:intron | 30.0% |
| ! | TAGGCTTTTACGTGTTATAT+GGG | - | chr8_1:73122127-73122146 | Msa1213080:intron | 30.0% |
| GTTACATATAAAGCAGATCT+AGG | + | chr8_1:73122363-73122382 | None:intergenic | 30.0% | |
| GATAAACCAAAATAACAGGT+GGG | + | chr8_1:73122387-73122406 | None:intergenic | 30.0% | |
| TGATAAACCAAAATAACAGG+TGG | + | chr8_1:73122388-73122407 | None:intergenic | 30.0% | |
| ACTAAAATATTAGGATGCTC+TGG | + | chr8_1:73122576-73122595 | None:intergenic | 30.0% | |
| TCTTTGGACAATATTAAGAG+TGG | - | chr8_1:73122803-73122822 | Msa1213080:intron | 30.0% | |
| GGTAATCTAGATAGATTATC+AGG | - | chr8_1:73123158-73123177 | Msa1213080:intron | 30.0% | |
| AAATCATCTGACAAATGAAG+CGG | + | chr8_1:73123277-73123296 | None:intergenic | 30.0% | |
| AAATCTAACACCTAGTAACA+AGG | + | chr8_1:73123590-73123609 | None:intergenic | 30.0% | |
| TGTTACTAGGTGTTAGATTT+AGG | - | chr8_1:73123590-73123609 | Msa1213080:intron | 30.0% | |
| AACTCAAATTCCACATGTAA+GGG | + | chr8_1:73123625-73123644 | None:intergenic | 30.0% | |
| AAACTCAAATTCCACATGTA+AGG | + | chr8_1:73123626-73123645 | None:intergenic | 30.0% | |
| TCAGTAATATGAGAATTGAG+GGG | + | chr8_1:73123728-73123747 | None:intergenic | 30.0% | |
| AAGCTAATGGTACAAATAAC+TGG | + | chr8_1:73123916-73123935 | None:intergenic | 30.0% | |
| AACCTTTAACTCTTTCCAAT+TGG | - | chr8_1:73123940-73123959 | Msa1213080:intron | 30.0% | |
| ACCTTTAACTCTTTCCAATT+GGG | - | chr8_1:73123941-73123960 | Msa1213080:intron | 30.0% | |
| GATCAGATTGCAAGTAAATT+TGG | - | chr8_1:73123968-73123987 | Msa1213080:intron | 30.0% | |
| !!! | AAGTTTTAGAATTGGCAGAA+AGG | + | chr8_1:73124114-73124133 | None:intergenic | 30.0% |
| AAAAATTCTGGGTGAAACAA+AGG | - | chr8_1:73124144-73124163 | Msa1213080:intron | 30.0% | |
| !!! | GACAATTTTTTTCTAGCATC+TGG | + | chr8_1:73124196-73124215 | None:intergenic | 30.0% |
| ATCCATATATCAAAGGTTTG+AGG | + | chr8_1:73124244-73124263 | None:intergenic | 30.0% | |
| TCGAGAAATCCATATATCAA+AGG | + | chr8_1:73124251-73124270 | None:intergenic | 30.0% | |
| ! | TTTATGAGCAATGTGTTTTG+AGG | - | chr8_1:73124584-73124603 | Msa1213080:CDS | 30.0% |
| !! | TTATGAGCAATGTGTTTTGA+GGG | - | chr8_1:73124585-73124604 | Msa1213080:CDS | 30.0% |
| TTTGAATAGAAGAGTCTTCA+AGG | + | chr8_1:73124642-73124661 | None:intergenic | 30.0% | |
| ! | TGCCTCATAAATTCCATTTT+AGG | - | chr8_1:73124682-73124701 | Msa1213080:intron | 30.0% |
| ATATTGACATTTCTGCGATT+TGG | + | chr8_1:73124800-73124819 | None:intergenic | 30.0% | |
| ACATGAACTTTCCAATGATT+AGG | - | chr8_1:73124963-73124982 | Msa1213080:intron | 30.0% | |
| CATGAACTTTCCAATGATTA+GGG | - | chr8_1:73124964-73124983 | Msa1213080:intron | 30.0% | |
| TTCAAGTATATAGTTGCTCT+TGG | + | chr8_1:73125039-73125058 | None:intergenic | 30.0% | |
| TAAAATTATGGCGAATCAAG+GGG | - | chr8_1:73125171-73125190 | Msa1213080:intron | 30.0% | |
| ACAAGAATACAAGATTGACA+GGG | + | chr8_1:73125246-73125265 | None:intergenic | 30.0% | |
| TACAAGAATACAAGATTGAC+AGG | + | chr8_1:73125247-73125266 | None:intergenic | 30.0% | |
| TCAAATTGATGCAATCTAGT+AGG | - | chr8_1:73125415-73125434 | Msa1213080:intron | 30.0% | |
| GTGCTGCAAAAGAAAAATAA+TGG | + | chr8_1:73125739-73125758 | None:intergenic | 30.0% | |
| CAAAAATGCAGAGCTTAGTT+CGG | - | chr8_1:73121313-73121332 | Msa1213080:three_prime_UTR | 35.0% | |
| TGTCGATGAAAATGAACTCT+GGG | + | chr8_1:73121615-73121634 | None:intergenic | 35.0% | |
| AGTAATCACATGTGTAGTGT+CGG | - | chr8_1:73122058-73122077 | Msa1213080:intron | 35.0% | |
| AGATGAAGTTAAATACGCAC+AGG | + | chr8_1:73122748-73122767 | None:intergenic | 35.0% | |
| TTTCTGTTCACAGATCTCTT+TGG | - | chr8_1:73122787-73122806 | Msa1213080:intron | 35.0% | |
| ATCTACATGACTGAATGCAT+TGG | + | chr8_1:73122849-73122868 | None:intergenic | 35.0% | |
| CATTTAATGTCCAACATGCT+TGG | - | chr8_1:73122875-73122894 | Msa1213080:intron | 35.0% | |
| AGATAGATTATCAGGCATTC+AGG | - | chr8_1:73123166-73123185 | Msa1213080:intron | 35.0% | |
| ! | AATTTTCTGGGTCATATGAC+TGG | - | chr8_1:73123472-73123491 | Msa1213080:CDS | 35.0% |
| ! | ATTTTCTGGGTCATATGACT+GGG | - | chr8_1:73123473-73123492 | Msa1213080:CDS | 35.0% |
| TTCTTGGTATCCTTGTTACT+AGG | - | chr8_1:73123577-73123596 | Msa1213080:intron | 35.0% | |
| ACTCAAATTCCACATGTAAG+GGG | + | chr8_1:73123624-73123643 | None:intergenic | 35.0% | |
| TAATATGAGAATTGAGGGGA+TGG | + | chr8_1:73123724-73123743 | None:intergenic | 35.0% | |
| TATAGCTTCAGCAGAAATTC+AGG | + | chr8_1:73123995-73124014 | None:intergenic | 35.0% | |
| !! | GTGGTTCTGTTTTCTATCTT+GGG | - | chr8_1:73124032-73124051 | Msa1213080:intron | 35.0% |
| CTTTGATGTTAGAGACTTGT+AGG | + | chr8_1:73124065-73124084 | None:intergenic | 35.0% | |
| CTACAAGTCTCTAACATCAA+AGG | - | chr8_1:73124063-73124082 | Msa1213080:intron | 35.0% | |
| AGTGTCTTTCTAATCATCAC+TGG | + | chr8_1:73124090-73124109 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTAGCATCTGGTGA+AGG | + | chr8_1:73124190-73124209 | None:intergenic | 35.0% |
| AGCCTCAAACCTTTGATATA+TGG | - | chr8_1:73124239-73124258 | Msa1213080:intron | 35.0% | |
| TAAATAAGTTTCATGGCCTG+TGG | - | chr8_1:73124741-73124760 | Msa1213080:intron | 35.0% | |
| AAATAAGTTTCATGGCCTGT+GGG | - | chr8_1:73124742-73124761 | Msa1213080:intron | 35.0% | |
| ATATAGTTGCTCTTGGATTG+AGG | + | chr8_1:73125032-73125051 | None:intergenic | 35.0% | |
| !!! | CTTTTTTATACCAGTTCCTG+CGG | - | chr8_1:73125059-73125078 | Msa1213080:intron | 35.0% |
| ! | TCAGTTTTTGACCTATCAGA+AGG | + | chr8_1:73125108-73125127 | None:intergenic | 35.0% |
| ! | ATCAAGGGGATCTTTTTGAT+CGG | - | chr8_1:73125185-73125204 | Msa1213080:intron | 35.0% |
| AGATATGCTGAGGATAATAG+AGG | - | chr8_1:73125211-73125230 | Msa1213080:CDS | 35.0% | |
| ! | TGAGGATAATAGAGGTATGA+TGG | - | chr8_1:73125219-73125238 | Msa1213080:CDS | 35.0% |
| AGTAGTTATGACTACGAGTT+TGG | + | chr8_1:73125338-73125357 | None:intergenic | 35.0% | |
| TCTGTTTCACCATCTTTCTA+CGG | + | chr8_1:73125509-73125528 | None:intergenic | 35.0% | |
| TAGAAAGATGGTGAAACAGA+CGG | - | chr8_1:73125509-73125528 | Msa1213080:intron | 35.0% | |
| AAAAAAAGCCCGTAGAAAGA+TGG | - | chr8_1:73125598-73125617 | Msa1213080:intron | 35.0% | |
| TCTGTTTCACCATCTTTCTA+CGG | + | chr8_1:73125509-73125528 | None:intergenic | 35.0% | |
| TAGAAAGATGGTGAAACAGA+CGG | - | chr8_1:73125509-73125528 | Msa1213080:intron | 35.0% | |
| AAAAAAAACAGCCACTTACC+AGG | - | chr8_1:73125701-73125720 | Msa1213080:intron | 35.0% | |
| AAAAAAACAGCCACTTACCA+GGG | - | chr8_1:73125702-73125721 | Msa1213080:intron | 35.0% | |
| !! | TAATGGTTTTCGTTTTTCCC+TGG | + | chr8_1:73125722-73125741 | None:intergenic | 35.0% |
| ATATCAGGATCTGCACATTT+GGG | - | chr8_1:73125841-73125860 | Msa1213080:CDS | 35.0% | |
| !!! | GTAAAAAACTTGTTTTGCGG+AGG | + | chr8_1:73125935-73125954 | None:intergenic | 35.0% |
| ATGTGGTGGTTTAGATTGGA+GGG | + | chr8_1:73121462-73121481 | None:intergenic | 40.0% | |
| AATGTGGTGGTTTAGATTGG+AGG | + | chr8_1:73121463-73121482 | None:intergenic | 40.0% | |
| AGGAATGTGGTGGTTTAGAT+TGG | + | chr8_1:73121466-73121485 | None:intergenic | 40.0% | |
| !! | GGAACGAATTTTGGTGGAAA+GGG | + | chr8_1:73121520-73121539 | None:intergenic | 40.0% |
| !! | AGGAACGAATTTTGGTGGAA+AGG | + | chr8_1:73121521-73121540 | None:intergenic | 40.0% |
| ! | GAAAGAGGAACGAATTTTGG+TGG | + | chr8_1:73121526-73121545 | None:intergenic | 40.0% |
| ! | GGAGAAAGAGGAACGAATTT+TGG | + | chr8_1:73121529-73121548 | None:intergenic | 40.0% |
| ! | GATCATTGATTGGGAGAAAG+AGG | + | chr8_1:73121541-73121560 | None:intergenic | 40.0% |
| CTGTCGATGAAAATGAACTC+TGG | + | chr8_1:73121616-73121635 | None:intergenic | 40.0% | |
| ATAATTCGTATCGGAGTGGT+TGG | - | chr8_1:73121658-73121677 | Msa1213080:intron | 40.0% | |
| AACGGGTATAGAGAATGTGA+CGG | + | chr8_1:73121691-73121710 | None:intergenic | 40.0% | |
| ! | TATCTGTGTTGGTGCTTCAT+AGG | + | chr8_1:73121965-73121984 | None:intergenic | 40.0% |
| ! | ATGAAGCACCAACACAGATA+CGG | - | chr8_1:73121965-73121984 | Msa1213080:intron | 40.0% |
| CACCTAAACCTTCTGATTGA+AGG | + | chr8_1:73122096-73122115 | None:intergenic | 40.0% | |
| ! | TTTAGGTGCTACAGAGGTTT+AGG | - | chr8_1:73122108-73122127 | Msa1213080:intron | 40.0% |
| !! | GTAACACCCACCTGTTATTT+TGG | - | chr8_1:73122378-73122397 | Msa1213080:intron | 40.0% |
| ATTAGGATGCTCTGGCTATT+TGG | + | chr8_1:73122568-73122587 | None:intergenic | 40.0% | |
| TACACTAATCTACACGCTTC+AGG | + | chr8_1:73122635-73122654 | None:intergenic | 40.0% | |
| CAATTTCATCCTTCAACAGC+TGG | + | chr8_1:73122699-73122718 | None:intergenic | 40.0% | |
| CATGTTGGACATTAAATGCC+AGG | + | chr8_1:73122873-73122892 | None:intergenic | 40.0% | |
| ATGCTTGGACTCTACTTCTT+TGG | - | chr8_1:73122890-73122909 | Msa1213080:intron | 40.0% | |
| ACTTCTTTGGATTGAGTGTG+CGG | - | chr8_1:73122903-73122922 | Msa1213080:intron | 40.0% | |
| ! | GCATTCAGGCTTGTTTGTTT+AGG | - | chr8_1:73123180-73123199 | Msa1213080:intron | 40.0% |
| ! | TTCAGGCTTGTTTGTTTAGG+TGG | - | chr8_1:73123183-73123202 | Msa1213080:intron | 40.0% |
| !! | ACGCAGCAAGCTTTTAGTTA+TGG | - | chr8_1:73123339-73123358 | Msa1213080:intron | 40.0% |
| CTCAAATTCCACATGTAAGG+GGG | + | chr8_1:73123623-73123642 | None:intergenic | 40.0% | |
| !!! | TGCCTACTTTTTGGTACACA+CGG | - | chr8_1:73123802-73123821 | Msa1213080:intron | 40.0% |
| TACCGTGTGTACCAAAAAGT+AGG | + | chr8_1:73123807-73123826 | None:intergenic | 40.0% | |
| GCCCAATTGGAAAGAGTTAA+AGG | + | chr8_1:73123945-73123964 | None:intergenic | 40.0% | |
| CAATCTGATCAAAGCCCAAT+TGG | + | chr8_1:73123958-73123977 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTGTTTTCTATCT+TGG | - | chr8_1:73124031-73124050 | Msa1213080:intron | 40.0% |
| ! | TCTGCATCTTGTTTGCAACA+GGG | - | chr8_1:73124422-73124441 | Msa1213080:intron | 40.0% |
| GGCTTCAAAGGATTTAGCAT+TGG | - | chr8_1:73124460-73124479 | Msa1213080:intron | 40.0% | |
| TACACAATTGTGTTCCACAG+AGG | + | chr8_1:73124723-73124742 | None:intergenic | 40.0% | |
| AATAGTTGATTGACACCCAC+AGG | + | chr8_1:73124760-73124779 | None:intergenic | 40.0% | |
| GCTGTTATCTACCTTCTGAT+AGG | - | chr8_1:73125094-73125113 | Msa1213080:intron | 40.0% | |
| TGATCGGAAAAGATATGCTG+AGG | - | chr8_1:73125201-73125220 | Msa1213080:CDS | 40.0% | |
| GACAACTAAGCTACTTGAGA+TGG | + | chr8_1:73125303-73125322 | None:intergenic | 40.0% | |
| CTGTTTCACCATCTTTCTAC+GGG | + | chr8_1:73125508-73125527 | None:intergenic | 40.0% | |
| !! | TGAAACAGACGGCTTTGTTT+AGG | - | chr8_1:73125520-73125539 | Msa1213080:intron | 40.0% |
| CTGTTTCACCATCTTTCTAC+GGG | + | chr8_1:73125508-73125527 | None:intergenic | 40.0% | |
| !! | TGAAACAGACGGCTTTGTTT+AGG | - | chr8_1:73125520-73125539 | Msa1213080:intron | 40.0% |
| !! | TTTCGTTTTTCCCTGGTAAG+TGG | + | chr8_1:73125715-73125734 | None:intergenic | 40.0% |
| GATATCAGGATCTGCACATT+TGG | - | chr8_1:73125840-73125859 | Msa1213080:CDS | 40.0% | |
| TATGAACATACTAGTGCTCG+CGG | - | chr8_1:73126107-73126126 | Msa1213080:CDS | 40.0% | |
| AAATGCAGAGCTTAGTTCGG+CGG | - | chr8_1:73121316-73121335 | Msa1213080:three_prime_UTR | 45.0% | |
| GTGGTTTAGATTGGAGGGTT+GGG | + | chr8_1:73121457-73121476 | None:intergenic | 45.0% | |
| AAGAAGGTGAAGGAATGTGG+TGG | + | chr8_1:73121476-73121495 | None:intergenic | 45.0% | |
| ! | GCTACGATCAATGACGCTTT+TGG | + | chr8_1:73121589-73121608 | None:intergenic | 45.0% |
| TGTCAAGTCCGTATCTGTGT+TGG | + | chr8_1:73121976-73121995 | None:intergenic | 45.0% | |
| TGACACTCACATGTTGACAC+CGG | - | chr8_1:73121991-73122010 | Msa1213080:intron | 45.0% | |
| CGCCTTCAATCAGAAGGTTT+AGG | - | chr8_1:73122091-73122110 | Msa1213080:intron | 45.0% | |
| ! | AGAAGGTTTAGGTGCTACAG+AGG | - | chr8_1:73122102-73122121 | Msa1213080:intron | 45.0% |
| ! | GTCCTTTTTGCAGGAGATTG+TGG | - | chr8_1:73122168-73122187 | Msa1213080:intron | 45.0% |
| AGCCACAATCTCCTGCAAAA+AGG | + | chr8_1:73122173-73122192 | None:intergenic | 45.0% | |
| AATGACACTGTGAGACGTTC+CGG | - | chr8_1:73122598-73122617 | Msa1213080:intron | 45.0% | |
| ACACGCTTCAGGCATGAATT+AGG | + | chr8_1:73122624-73122643 | None:intergenic | 45.0% | |
| TGCACTTTACCAGCTGTTGA+AGG | - | chr8_1:73122687-73122706 | Msa1213080:intron | 45.0% | |
| CATTCAGTCATGTAGATGCC+TGG | - | chr8_1:73122852-73122871 | Msa1213080:intron | 45.0% | |
| GAAGTAGAGTCCAAGCATGT+TGG | + | chr8_1:73122888-73122907 | None:intergenic | 45.0% | |
| !! | AAAGCTTGCTGCGTGATTAC+TGG | + | chr8_1:73123333-73123352 | None:intergenic | 45.0% |
| GAAGAAAACCCCCTTACATG+TGG | - | chr8_1:73123612-73123631 | Msa1213080:intron | 45.0% | |
| CTGCTGAAGCTATATCTTGC+TGG | - | chr8_1:73124001-73124020 | Msa1213080:intron | 45.0% | |
| CTATATCTTGCTGGCGCAAT+TGG | - | chr8_1:73124010-73124029 | Msa1213080:intron | 45.0% | |
| ! | CTCTGCATCTTGTTTGCAAC+AGG | - | chr8_1:73124421-73124440 | Msa1213080:intron | 45.0% |
| ! | TCTTGTTTGCAACAGGGCTA+TGG | - | chr8_1:73124428-73124447 | Msa1213080:intron | 45.0% |
| ATTACCAGCTTCCGTTCTTC+AGG | - | chr8_1:73124504-73124523 | Msa1213080:intron | 45.0% | |
| TTACCAGCTTCCGTTCTTCA+GGG | - | chr8_1:73124505-73124524 | Msa1213080:intron | 45.0% | |
| !!! | GAGCAATGTGTTTTGAGGGA+AGG | - | chr8_1:73124589-73124608 | Msa1213080:CDS | 45.0% |
| TCCAATGATTAGGGAGCAAG+TGG | - | chr8_1:73124973-73124992 | Msa1213080:intron | 45.0% | |
| TCCACTTGCTCCCTAATCAT+TGG | + | chr8_1:73124977-73124996 | None:intergenic | 45.0% | |
| AGTAGCTTAGTTGTCCGAGA+AGG | - | chr8_1:73125308-73125327 | Msa1213080:intron | 45.0% | |
| ! | ACGAGTTTGGTGATCCTTCT+CGG | + | chr8_1:73125325-73125344 | None:intergenic | 45.0% |
| ! | GCTTTAAGCCCGTAGAAAGA+TGG | - | chr8_1:73125497-73125516 | Msa1213080:intron | 45.0% |
| CCATAGCATGGTCAAGAGTT+CGG | - | chr8_1:73125881-73125900 | Msa1213080:CDS | 45.0% | |
| ! | GTTTTGCGGAGGTCTGAAAA+AGG | + | chr8_1:73125924-73125943 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTTTTTTATTAAA+AGG | + | chr8_1:73125586-73125605 | None:intergenic | 5.0% |
| !! | TGAAGGTGAGGTTGGGTTGA+AGG | + | chr8_1:73121392-73121411 | None:intergenic | 50.0% |
| TGAGGGTTGAAGGTGAGGTT+GGG | + | chr8_1:73121399-73121418 | None:intergenic | 50.0% | |
| AAGGACGAGTGTGGGAGATA+CGG | + | chr8_1:73121422-73121441 | None:intergenic | 50.0% | |
| ! | GTGAGTTGAAGGACGAGTGT+GGG | + | chr8_1:73121430-73121449 | None:intergenic | 50.0% |
| ! | TGTGAGTTGAAGGACGAGTG+TGG | + | chr8_1:73121431-73121450 | None:intergenic | 50.0% |
| GGTGGTTTAGATTGGAGGGT+TGG | + | chr8_1:73121458-73121477 | None:intergenic | 50.0% | |
| CGGAAGAAGGTGAAGGAATG+TGG | + | chr8_1:73121479-73121498 | None:intergenic | 50.0% | |
| ! | TGAATGGCGGAAGAAGGTGA+AGG | + | chr8_1:73121486-73121505 | None:intergenic | 50.0% |
| ! | CATGAGTGAATGGCGGAAGA+AGG | + | chr8_1:73121492-73121511 | None:intergenic | 50.0% |
| CTTCTTCCGCCATTCACTCA+TGG | - | chr8_1:73121490-73121509 | Msa1213080:three_prime_UTR | 50.0% | |
| AAGGGAACGCCATGAGTGAA+TGG | + | chr8_1:73121502-73121521 | None:intergenic | 50.0% | |
| ! | ACATGTGTAGTGTCGGACAC+CGG | - | chr8_1:73122065-73122084 | Msa1213080:intron | 50.0% |
| ! | CTTCTGATTGAAGGCGTGTC+CGG | + | chr8_1:73122087-73122106 | None:intergenic | 50.0% |
| GCAGGAGATTGTGGCTAAAC+AGG | - | chr8_1:73122177-73122196 | Msa1213080:intron | 50.0% | |
| ACACCAGATGACGTGGTTCT+GGG | - | chr8_1:73122203-73122222 | Msa1213080:intron | 50.0% | |
| GCTTCAGGCATGAATTAGGC+CGG | + | chr8_1:73122620-73122639 | None:intergenic | 50.0% | |
| AGAATTGAGGGGATGGCTAG+TGG | + | chr8_1:73123717-73123736 | None:intergenic | 50.0% | |
| TATCTTGCTGGCGCAATTGG+TGG | - | chr8_1:73124013-73124032 | Msa1213080:intron | 50.0% | |
| TGGAGCGATCAAGGCTTCAA+AGG | - | chr8_1:73124448-73124467 | Msa1213080:intron | 50.0% | |
| ! | TTCCGTTCTTCAGGGAGTGT+AGG | - | chr8_1:73124513-73124532 | Msa1213080:intron | 50.0% |
| GTCCTACACTCCCTGAAGAA+CGG | + | chr8_1:73124518-73124537 | None:intergenic | 50.0% | |
| ! | CTGCGATTTGGCGAACTTGA+TGG | + | chr8_1:73124788-73124807 | None:intergenic | 50.0% |
| TAGGGAGACAGTGCGATATC+AGG | - | chr8_1:73125826-73125845 | Msa1213080:CDS | 50.0% | |
| TCAGGATCTGCACATTTGGG+TGG | - | chr8_1:73125844-73125863 | Msa1213080:CDS | 50.0% | |
| TTGCAGTTGCAGCCATAGCA+TGG | - | chr8_1:73125869-73125888 | Msa1213080:CDS | 50.0% | |
| CCGAACTCTTGACCATGCTA+TGG | + | chr8_1:73125884-73125903 | None:intergenic | 50.0% | |
| GCATGGTCAAGAGTTCGGAA+AGG | - | chr8_1:73125886-73125905 | Msa1213080:CDS | 50.0% | |
| ! | CTCGCGGTGTCAATGTAGTT+GGG | - | chr8_1:73126123-73126142 | Msa1213080:CDS | 50.0% |
| GAGCTTAGTTCGGCGGTTCA+CGG | - | chr8_1:73121323-73121342 | Msa1213080:three_prime_UTR | 55.0% | |
| !! | GTTGAAGGTGGTGGTGATGG+TGG | + | chr8_1:73121377-73121396 | None:intergenic | 55.0% |
| ! | TGGGTTGAAGGTGGTGGTGA+TGG | + | chr8_1:73121380-73121399 | None:intergenic | 55.0% |
| !! | TGAGGTTGGGTTGAAGGTGG+TGG | + | chr8_1:73121386-73121405 | None:intergenic | 55.0% |
| !! | AGGTGAGGTTGGGTTGAAGG+TGG | + | chr8_1:73121389-73121408 | None:intergenic | 55.0% |
| GTGAGGGTTGAAGGTGAGGT+TGG | + | chr8_1:73121400-73121419 | None:intergenic | 55.0% | |
| TACGGTGAGGGTTGAAGGTG+AGG | + | chr8_1:73121404-73121423 | None:intergenic | 55.0% | |
| GGAGATACGGTGAGGGTTGA+AGG | + | chr8_1:73121409-73121428 | None:intergenic | 55.0% | |
| GAGTGTGGGAGATACGGTGA+GGG | + | chr8_1:73121416-73121435 | None:intergenic | 55.0% | |
| ! | GGTTGGGCGATGTGAGTTGA+AGG | + | chr8_1:73121441-73121460 | None:intergenic | 55.0% |
| GGAACGCCATGAGTGAATGG+CGG | + | chr8_1:73121499-73121518 | None:intergenic | 55.0% | |
| CGGACACGCCTTCAATCAGA+AGG | - | chr8_1:73122085-73122104 | Msa1213080:intron | 55.0% | |
| GACACCAGATGACGTGGTTC+TGG | - | chr8_1:73122202-73122221 | Msa1213080:intron | 55.0% | |
| ! | CACCAGATGACGTGGTTCTG+GGG | - | chr8_1:73122204-73122223 | Msa1213080:intron | 55.0% |
| AACCCCAGAACCACGTCATC+TGG | + | chr8_1:73122209-73122228 | None:intergenic | 55.0% | |
| ACAGGGCTATGGAGCGATCA+AGG | - | chr8_1:73124439-73124458 | Msa1213080:intron | 55.0% | |
| ACTCCCTGAAGAACGGAAGC+TGG | + | chr8_1:73124511-73124530 | None:intergenic | 55.0% | |
| ! | GCTCGCGGTGTCAATGTAGT+TGG | - | chr8_1:73126122-73126141 | Msa1213080:CDS | 55.0% |
| CTTAGTTCGGCGGTTCACGG+CGG | - | chr8_1:73121326-73121345 | Msa1213080:three_prime_UTR | 60.0% | |
| !! | GGTGGTGGTGGTGGTTGTGA+TGG | + | chr8_1:73121359-73121378 | None:intergenic | 60.0% |
| !! | GAAGGTGGTGGTGATGGTGG+TGG | + | chr8_1:73121374-73121393 | None:intergenic | 60.0% |
| CGAGTGTGGGAGATACGGTG+AGG | + | chr8_1:73121417-73121436 | None:intergenic | 60.0% | |
| CAGGCTGACACCAGATGACG+TGG | - | chr8_1:73122196-73122215 | Msa1213080:intron | 60.0% | |
| !! | GGTGGTGATGGTGGTGGTGG+TGG | + | chr8_1:73121368-73121387 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGATGGTGGTGG+TGG | + | chr8_1:73121371-73121390 | None:intergenic | 65.0% |
| ACCAGTTCCTGCGGCGTTGC+TGG | - | chr8_1:73125068-73125087 | Msa1213080:intron | 65.0% | |
| ACCAGCAACGCCGCAGGAAC+TGG | + | chr8_1:73125072-73125091 | None:intergenic | 65.0% | |
| CAGCTTACCAGCAACGCCGC+AGG | + | chr8_1:73125078-73125097 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73121276 | 73126215 | 73121276 | ID=Msa1213080;Name=Msa1213080 |
| chr8_1 | mRNA | 73121276 | 73126215 | 73121276 | ID=Msa1213080-mRNA-1;Parent=Msa1213080;Name=Msa1213080-mRNA-1;_AED=0.06;_eAED=0.06;_QI=42|1|1|1|0.71|0.87|8|297|329 |
| chr8_1 | exon | 73121276 | 73121662 | 73121276 | ID=Msa1213080-mRNA-1:exon:24811;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73122259 | 73122300 | 73122259 | ID=Msa1213080-mRNA-1:exon:24810;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73122402 | 73122506 | 73122402 | ID=Msa1213080-mRNA-1:exon:24809;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73123010 | 73123048 | 73123010 | ID=Msa1213080-mRNA-1:exon:24808;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73123407 | 73123517 | 73123407 | ID=Msa1213080-mRNA-1:exon:24807;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73124572 | 73124691 | 73124572 | ID=Msa1213080-mRNA-1:exon:24806;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73125190 | 73125310 | 73125190 | ID=Msa1213080-mRNA-1:exon:24805;Parent=Msa1213080-mRNA-1 |
| chr8_1 | exon | 73125812 | 73126215 | 73125812 | ID=Msa1213080-mRNA-1:exon:24804;Parent=Msa1213080-mRNA-1 |
| chr8_1 | five_prime_UTR | 73126174 | 73126215 | 73126174 | ID=Msa1213080-mRNA-1:five_prime_utr;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73125812 | 73126173 | 73125812 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73125190 | 73125310 | 73125190 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73124572 | 73124691 | 73124572 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73123407 | 73123517 | 73123407 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73123010 | 73123048 | 73123010 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73122402 | 73122506 | 73122402 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73122259 | 73122300 | 73122259 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | CDS | 73121573 | 73121662 | 73121573 | ID=Msa1213080-mRNA-1:cds;Parent=Msa1213080-mRNA-1 |
| chr8_1 | three_prime_UTR | 73121276 | 73121572 | 73121276 | ID=Msa1213080-mRNA-1:three_prime_utr;Parent=Msa1213080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
