Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213190 | XP_013458009.1 | 89.634 | 328 | 17 | 2 | 1 | 314 | 1 | 325 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213190 | sp|Q9FZ81|RBL12_ARATH | 56.250 | 272 | 91 | 6 | 64 | 314 | 70 | 334 | 2.68e-84 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213190 | A0A072V1P2 | 89.634 | 328 | 17 | 2 | 1 | 314 | 1 | 325 | 0.0 | 579 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1213080 | Msa1213190 | 0.837893 | 3.972921e-57 | -8.615850e-47 |
| Msa1213190 | Msa1391770 | 0.800704 | 1.271744e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213190 | MtrunA17_Chr4g0061591 | 89.634 | 328 | 17 | 2 | 1 | 314 | 1 | 325 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213190 | AT1G18600.1 | 56.250 | 272 | 91 | 6 | 64 | 314 | 70 | 334 | 2.73e-85 | 260 |
| Msa1213190 | AT1G74130.1 | 34.304 | 309 | 157 | 10 | 33 | 314 | 31 | 320 | 5.94e-47 | 161 |
| Msa1213190 | AT1G74140.4 | 42.029 | 207 | 101 | 7 | 117 | 314 | 110 | 306 | 3.61e-42 | 148 |
| Msa1213190 | AT1G74140.1 | 39.908 | 218 | 101 | 8 | 117 | 314 | 110 | 317 | 1.29e-39 | 141 |
| Msa1213190 | AT1G74130.2 | 34.351 | 262 | 141 | 8 | 33 | 282 | 31 | 273 | 2.83e-39 | 140 |
| Msa1213190 | AT1G74140.5 | 39.367 | 221 | 101 | 8 | 117 | 314 | 110 | 320 | 3.14e-39 | 140 |
| Msa1213190 | AT1G74140.2 | 36.697 | 218 | 89 | 8 | 117 | 314 | 110 | 298 | 1.40e-28 | 112 |
| Msa1213190 | AT1G74140.3 | 36.199 | 221 | 89 | 8 | 117 | 314 | 110 | 301 | 3.15e-28 | 111 |
Find 90 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAGATTGCAAGTAAATT+TGG | 0.127860 | 8_1:-73283574 | Msa1213190:intron |
| AGCAATTTCCTTAAATAAAA+TGG | 0.190591 | 8_1:+73281462 | None:intergenic |
| TATAAATTAGGTGAAGTTAT+TGG | 0.205309 | 8_1:-73281637 | Msa1213190:three_prime_UTR |
| TTAATTAGCAACTATAAATT+AGG | 0.220500 | 8_1:-73281649 | Msa1213190:three_prime_UTR |
| ATGCTTGGACTCTACTTCTT+TGG | 0.221067 | 8_1:-73284650 | Msa1213190:CDS |
| GGAGAAAGAGGAACGAATTT+TGG | 0.227418 | 8_1:+73286014 | None:intergenic |
| GACACCAGATGACGTGGTTC+TGG | 0.230010 | 8_1:-73285338 | Msa1213190:CDS |
| GACAGAACTACATTTCAAAT+TGG | 0.283737 | 8_1:-73285909 | Msa1213190:CDS |
| ATAAATTAGGTGAAGTTATT+GGG | 0.290730 | 8_1:-73281636 | Msa1213190:three_prime_UTR |
| GTTGAAGGTGGTGGTGGTGG+TGG | 0.297961 | 8_1:+73286166 | None:intergenic |
| TGAAGGTGAGGTTGGGTTGA+AGG | 0.308866 | 8_1:+73286151 | None:intergenic |
| ACCAGTTCCTGCGGCGTTGC+TGG | 0.311615 | 8_1:-73282474 | Msa1213190:intron |
| TGGGTTGAAGGTGGTGGTGG+TGG | 0.312134 | 8_1:+73286163 | None:intergenic |
| CTATATCTTGCTGGCGCAAT+TGG | 0.317104 | 8_1:-73283532 | Msa1213190:CDS |
| TATAGCTTCAGCAGAAATTC+AGG | 0.326477 | 8_1:+73283550 | None:intergenic |
| ATCAGATTGCAAGTAAATTT+GGG | 0.330197 | 8_1:-73283573 | Msa1213190:intron |
| CTTTGATGTTAGAGACTTGT+AGG | 0.345445 | 8_1:+73283480 | None:intergenic |
| GCAGGAGATTGTGGCTAAAC+AGG | 0.348440 | 8_1:-73285363 | Msa1213190:intron |
| CTGCTGAAGCTATATCTTGC+TGG | 0.359474 | 8_1:-73283541 | Msa1213190:CDS |
| GATATCAGGATCTGCACATT+TGG | 0.362814 | 8_1:-73281800 | Msa1213190:CDS |
| GCTACGATCAATGATGCTTT+TGG | 0.365535 | 8_1:+73285954 | None:intergenic |
| GTGGTTTAGATTGGAGGGTT+GGG | 0.368070 | 8_1:+73286086 | None:intergenic |
| GTGAGGGTTGAAGGTGAGGT+TGG | 0.371478 | 8_1:+73286143 | None:intergenic |
| TAGGGAGACAGTGCGATATC+AGG | 0.388761 | 8_1:-73281814 | Msa1213190:CDS |
| TTCAAGTATATAGTTGCTCT+TGG | 0.389439 | 8_1:+73282506 | None:intergenic |
| ACACCAGATGACGTGGTTCT+GGG | 0.403748 | 8_1:-73285337 | Msa1213190:CDS |
| GGTTGGGTTGAAGGTGGTGG+TGG | 0.408905 | 8_1:+73286160 | None:intergenic |
| CATTTAATGTCCAACATGCT+TGG | 0.418509 | 8_1:-73284665 | Msa1213190:CDS |
| AGGAATGTGGTGGTTTAGAT+TGG | 0.427442 | 8_1:+73286077 | None:intergenic |
| TGAGGTTGGGTTGAAGGTGG+TGG | 0.427891 | 8_1:+73286157 | None:intergenic |
| GGAGATACGGTGAGGGTTGA+AGG | 0.429536 | 8_1:+73286134 | None:intergenic |
| AACCCCAGAACCACGTCATC+TGG | 0.431625 | 8_1:+73285334 | None:intergenic |
| CTGTCGATGAAAATGAACTC+TGG | 0.434382 | 8_1:+73285927 | None:intergenic |
| TGAGGGTTGAAGGTGAGGTT+GGG | 0.435029 | 8_1:+73286144 | None:intergenic |
| ACCAGCAACGCCGCAGGAAC+TGG | 0.440265 | 8_1:+73282473 | None:intergenic |
| GCTCGCGGTGTCAATGTAGT+TGG | 0.442848 | 8_1:-73281518 | Msa1213190:three_prime_UTR |
| TTCTTCGAAAGATCATTGAT+TGG | 0.447627 | 8_1:+73285992 | None:intergenic |
| ATATCAGGATCTGCACATTT+GGG | 0.448175 | 8_1:-73281799 | Msa1213190:CDS |
| TCTTCGAAAGATCATTGATT+GGG | 0.451663 | 8_1:+73285993 | None:intergenic |
| GGTGGTTTAGATTGGAGGGT+TGG | 0.457213 | 8_1:+73286085 | None:intergenic |
| CCATAGCATGGTCAAGAGTT+CGG | 0.457547 | 8_1:-73281759 | Msa1213190:CDS |
| CTTCTTCCGCCATTCACTCA+TGG | 0.466264 | 8_1:-73286050 | Msa1213190:CDS |
| TCTTGTTTGCAACAGGGCTA+TGG | 0.467275 | 8_1:-73283114 | Msa1213190:intron |
| TATCTTGCTGGCGCAATTGG+TGG | 0.476126 | 8_1:-73283529 | Msa1213190:CDS |
| GAGCTTAGTTCGGCGGTTCA+CGG | 0.483010 | 8_1:-73286214 | Msa1213190:CDS |
| AGGTGAGGTTGGGTTGAAGG+TGG | 0.483066 | 8_1:+73286154 | None:intergenic |
| GATCATTGATTGGGAGAAAG+AGG | 0.487060 | 8_1:+73286002 | None:intergenic |
| CTCGCGGTGTCAATGTAGTT+GGG | 0.489692 | 8_1:-73281517 | Msa1213190:three_prime_UTR |
| ATATAGTTGCTCTTGGATTG+AGG | 0.494470 | 8_1:+73282513 | None:intergenic |
| ACAGGGCTATGGCGCGATCA+AGG | 0.496297 | 8_1:-73283103 | Msa1213190:intron |
| GGCTTCAAAGGATTTAGCAT+TGG | 0.497089 | 8_1:-73283082 | Msa1213190:intron |
| AATGTGGTGGTTTAGATTGG+AGG | 0.509707 | 8_1:+73286080 | None:intergenic |
| CAAAAGAATTGAAATAGAGT+AGG | 0.510885 | 8_1:+73281489 | None:intergenic |
| TGTCGATGAAAATGAACTCT+GGG | 0.511770 | 8_1:+73285928 | None:intergenic |
| TACGGTGAGGGTTGAAGGTG+AGG | 0.512141 | 8_1:+73286139 | None:intergenic |
| AAGGGAACGCCATGAGTGAA+TGG | 0.517164 | 8_1:+73286041 | None:intergenic |
| CCGAACTCTTGACCATGCTA+TGG | 0.521181 | 8_1:+73281759 | None:intergenic |
| ATGTGGTGGTTTAGATTGGA+GGG | 0.523563 | 8_1:+73286081 | None:intergenic |
| CATGTTGGACATTAAATGCC+AGG | 0.532362 | 8_1:+73284670 | None:intergenic |
| GGTTGGGCGATGTGAGTTGA+AGG | 0.532991 | 8_1:+73286102 | None:intergenic |
| CATGAGTGAATGGCGGAAGA+AGG | 0.533160 | 8_1:+73286051 | None:intergenic |
| CGGAAGAAGGTGAAGGAATG+TGG | 0.536318 | 8_1:+73286064 | None:intergenic |
| TCCAATGATTAGGGAGCAAG+TGG | 0.538219 | 8_1:-73282569 | Msa1213190:intron |
| CATTCAGTCATGTAGATGCC+TGG | 0.544602 | 8_1:-73284688 | Msa1213190:CDS |
| AAGGACGAGTGTGGGAGATA+CGG | 0.554278 | 8_1:+73286121 | None:intergenic |
| AAAAGAATTGAAATAGAGTA+GGG | 0.554411 | 8_1:+73281490 | None:intergenic |
| ATAATTCGTATCGGAGTGGT+TGG | 0.559072 | 8_1:-73285882 | Msa1213190:intron |
| CTACAAGTCTCTAACATCAA+AGG | 0.563755 | 8_1:-73283479 | Msa1213190:intron |
| GAAGTAGAGTCCAAGCATGT+TGG | 0.565236 | 8_1:+73284655 | None:intergenic |
| CAGCTTACCAGCAACGCCGC+AGG | 0.572037 | 8_1:+73282467 | None:intergenic |
| TGGCGCGATCAAGGCTTCAA+AGG | 0.573750 | 8_1:-73283094 | Msa1213190:CDS |
| ATCTACATGACTGAATGCAT+TGG | 0.587624 | 8_1:+73284694 | None:intergenic |
| TCTTTAGACAATATTAAGAG+TGG | 0.590600 | 8_1:-73284737 | Msa1213190:CDS |
| ATTGGAATAATAATTCGTAT+CGG | 0.595875 | 8_1:-73285891 | Msa1213190:CDS |
| CACCAGATGACGTGGTTCTG+GGG | 0.602466 | 8_1:-73285336 | Msa1213190:CDS |
| TTGCAGTTGCAGCCATAGCA+TGG | 0.613540 | 8_1:-73281771 | Msa1213190:CDS |
| TCAGGATCTGCACATTTGGG+TGG | 0.628970 | 8_1:-73281796 | Msa1213190:CDS |
| CAGGCTGACACCAGATGACG+TGG | 0.635192 | 8_1:-73285344 | Msa1213190:CDS |
| AAATGCAGAGCTTAGTTCGG+CGG | 0.641989 | 8_1:-73286221 | Msa1213190:CDS |
| AATAATAATTCGTATCGGAG+TGG | 0.642796 | 8_1:-73285886 | Msa1213190:CDS |
| AAGAAGGTGAAGGAATGTGG+TGG | 0.648391 | 8_1:+73286067 | None:intergenic |
| GTGAGTTGAAGGACGAGTGT+GGG | 0.670836 | 8_1:+73286113 | None:intergenic |
| TGAATGGCGGAAGAAGGTGA+AGG | 0.678778 | 8_1:+73286057 | None:intergenic |
| GCATGGTCAAGAGTTCGGAA+AGG | 0.680049 | 8_1:-73281754 | Msa1213190:CDS |
| CGAGTGTGGGAGATACGGTG+AGG | 0.681414 | 8_1:+73286126 | None:intergenic |
| TGTGAGTTGAAGGACGAGTG+TGG | 0.689784 | 8_1:+73286112 | None:intergenic |
| TATGAACTTACTAGTGCTCG+CGG | 0.699567 | 8_1:-73281533 | Msa1213190:three_prime_UTR |
| GAGTGTGGGAGATACGGTGA+GGG | 0.708234 | 8_1:+73286127 | None:intergenic |
| GGAACGCCATGAGTGAATGG+CGG | 0.713842 | 8_1:+73286044 | None:intergenic |
| CTTAGTTCGGCGGTTCACGG+CGG | 0.738046 | 8_1:-73286211 | Msa1213190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTATTTATTAAA+AGG | + | chr8_1:73285752-73285771 | None:intergenic | 0.0% |
| !!! | TTTCTTTTTAAAAAAAATTC+TGG | - | chr8_1:73284298-73284317 | Msa1213190:intron | 10.0% |
| !!! | TTCTTTTTAAAAAAAATTCT+GGG | - | chr8_1:73284299-73284318 | Msa1213190:intron | 10.0% |
| !!! | CAAAAAAAAAATTGATAATA+AGG | + | chr8_1:73285047-73285066 | None:intergenic | 10.0% |
| !! | TTTATTAAAAGGAAAAATAA+AGG | + | chr8_1:73285741-73285760 | None:intergenic | 10.0% |
| !!! | TCAATTTTGTCATTATAATT+TGG | - | chr8_1:73281909-73281928 | Msa1213190:intron | 15.0% |
| !! | ATGTTGTTAAATAAAAATCA+GGG | + | chr8_1:73282103-73282122 | None:intergenic | 15.0% |
| !!! | ACTTATTATTCTTTGTTTTA+TGG | + | chr8_1:73283212-73283231 | None:intergenic | 15.0% |
| !! | AATAAAACATATTAATCAGA+AGG | + | chr8_1:73283711-73283730 | None:intergenic | 15.0% |
| !!! | TTATTCATTTTATAACTTCT+TGG | - | chr8_1:73283726-73283745 | Msa1213190:intron | 15.0% |
| !!! | TAAAAAGAAAGTTTTAGAAT+TGG | + | chr8_1:73284288-73284307 | None:intergenic | 15.0% |
| !! | ATTCAAAAATCAAATTGAAT+AGG | - | chr8_1:73284821-73284840 | Msa1213190:intron | 15.0% |
| !!! | ACATAATTTAAAACCTAAAA+TGG | + | chr8_1:73284864-73284883 | None:intergenic | 15.0% |
| !! | CTAACATTATAAATAATTGT+TGG | - | chr8_1:73285860-73285879 | Msa1213190:intron | 15.0% |
| !! | TTAATTAGCAACTATAAATT+AGG | - | chr8_1:73286059-73286078 | Msa1213190:CDS | 15.0% |
| !! | ATTGGAATAATAATTCGTAT+CGG | - | chr8_1:73281817-73281836 | Msa1213190:intron | 20.0% |
| !!! | AAGATTGAAATTTTCGAATT+TGG | + | chr8_1:73282012-73282031 | None:intergenic | 20.0% |
| !! | GATGTTGTTAAATAAAAATC+AGG | + | chr8_1:73282104-73282123 | None:intergenic | 20.0% |
| !!! | TCATTTTCTTAAATTACAAC+CGG | + | chr8_1:73282181-73282200 | None:intergenic | 20.0% |
| !!! | ATGTTGCTGTTTTTTTATTT+TGG | - | chr8_1:73282408-73282427 | Msa1213190:intron | 20.0% |
| !! | TTACATATAAAGCAAATGTA+GGG | + | chr8_1:73282530-73282549 | None:intergenic | 20.0% |
| !! | ATTTGATAAACCAAAATAAC+AGG | + | chr8_1:73282559-73282578 | None:intergenic | 20.0% |
| !!! | TGTATAATTTGTATTATTGC+AGG | - | chr8_1:73282606-73282625 | Msa1213190:intron | 20.0% |
| !! | TGATCTATTACTATTATCTT+TGG | - | chr8_1:73282633-73282652 | Msa1213190:intron | 20.0% |
| !! | TTCTATCCTCAATAAAAATA+AGG | + | chr8_1:73282678-73282697 | None:intergenic | 20.0% |
| !! | TGTCATTCAACTAAAATATT+AGG | + | chr8_1:73282753-73282772 | None:intergenic | 20.0% |
| !! | ATCAAATTAGTAATTGTTTC+TGG | - | chr8_1:73282829-73282848 | Msa1213190:intron | 20.0% |
| !! | AACAAAATATTACTAAGGTA+AGG | + | chr8_1:73283157-73283176 | None:intergenic | 20.0% |
| !! | CCTAAAACAAAATATTACTA+AGG | + | chr8_1:73283162-73283181 | None:intergenic | 20.0% |
| !!! | CCTTAGTAATATTTTGTTTT+AGG | - | chr8_1:73283159-73283178 | Msa1213190:intron | 20.0% |
| !!! | AGTAATATTTTGTTTTAGGT+TGG | - | chr8_1:73283163-73283182 | Msa1213190:intron | 20.0% |
| !! | ACAAAGAATAATAAGTCATA+TGG | - | chr8_1:73283216-73283235 | Msa1213190:intron | 20.0% |
| !!! | AAAAAATATCTGAAGTTCTT+AGG | - | chr8_1:73283302-73283321 | Msa1213190:intron | 20.0% |
| !!! | ATGTTTTCTCTTTAATTTTC+TGG | - | chr8_1:73283624-73283643 | Msa1213190:intron | 20.0% |
| !!! | TGTTTTCTCTTTAATTTTCT+GGG | - | chr8_1:73283625-73283644 | Msa1213190:intron | 20.0% |
| !! | GAAAAGGAAAAATATGAAAT+AGG | + | chr8_1:73283668-73283687 | None:intergenic | 20.0% |
| !!! | ATTTTTCCTTTTCTTTTTGT+AGG | - | chr8_1:73283675-73283694 | Msa1213190:intron | 20.0% |
| !! | AAAGTTAATATTTACACTCT+TGG | - | chr8_1:73284487-73284506 | Msa1213190:intron | 20.0% |
| !! | AATTGTGTAAATAAGTTTCA+TGG | - | chr8_1:73284900-73284919 | Msa1213190:intron | 20.0% |
| !! | ATACAGAAATTTCATAACAA+TGG | + | chr8_1:73285612-73285631 | None:intergenic | 20.0% |
| !!! | AAAAACAAAGCATTAACATT+TGG | - | chr8_1:73285837-73285856 | Msa1213190:intron | 20.0% |
| !! | TATAAATTAGGTGAAGTTAT+TGG | - | chr8_1:73286071-73286090 | Msa1213190:CDS | 20.0% |
| !! | ATAAATTAGGTGAAGTTATT+GGG | - | chr8_1:73286072-73286091 | Msa1213190:CDS | 20.0% |
| !! | AAAAGAATTGAAATAGAGTA+GGG | + | chr8_1:73286221-73286240 | None:intergenic | 20.0% |
| !! | AGCAATTTCCTTAAATAAAA+TGG | + | chr8_1:73286249-73286268 | None:intergenic | 20.0% |
| ! | TCAGATTGTAAACAAATGAA+CGG | + | chr8_1:73281877-73281896 | None:intergenic | 25.0% |
| !! | ATTTAGTTTAGGGTTTATGA+GGG | - | chr8_1:73281938-73281957 | Msa1213190:intron | 25.0% |
| !!! | ATATAATTTGTCCTTTTTGC+AGG | - | chr8_1:73282327-73282346 | Msa1213190:intron | 25.0% |
| ! | GTTACATATAAAGCAAATGT+AGG | + | chr8_1:73282531-73282550 | None:intergenic | 25.0% |
| ! | TGGTTTATCAAATGTTTCTT+AGG | - | chr8_1:73282566-73282585 | Msa1213190:intron | 25.0% |
| !!! | CTCTTACCTTATTTTTATTG+AGG | - | chr8_1:73282669-73282688 | Msa1213190:intron | 25.0% |
| ! | TCTTTAGACAATATTAAGAG+TGG | - | chr8_1:73282971-73282990 | Msa1213190:intron | 25.0% |
| ! | ATATTACTAAGGTAAGGAAA+AGG | + | chr8_1:73283151-73283170 | None:intergenic | 25.0% |
| ! | AGTCATATGGTTATGAAATT+TGG | - | chr8_1:73283229-73283248 | Msa1213190:intron | 25.0% |
| ! | TCTCTTGAAAATTGTTTGTT+TGG | - | chr8_1:73283388-73283407 | Msa1213190:intron | 25.0% |
| ! | AATCTAAAGACAAAAGTGAT+TGG | + | chr8_1:73283543-73283562 | None:intergenic | 25.0% |
| ! | CATAAACCTACAAAAAGAAA+AGG | + | chr8_1:73283684-73283703 | None:intergenic | 25.0% |
| ! | AAGTACTATCTACTAATTGT+TGG | - | chr8_1:73283818-73283837 | Msa1213190:intron | 25.0% |
| ! | AGTACTATCTACTAATTGTT+GGG | - | chr8_1:73283819-73283838 | Msa1213190:intron | 25.0% |
| ! | ATCAGTAATATGAGAATTGA+GGG | + | chr8_1:73283894-73283913 | None:intergenic | 25.0% |
| ! | TATCAGTAATATGAGAATTG+AGG | + | chr8_1:73283895-73283914 | None:intergenic | 25.0% |
| !!! | CATTTATTTGCCTTACTTTT+TGG | - | chr8_1:73283959-73283978 | Msa1213190:intron | 25.0% |
| ! | TGCAGAGAAAAACAAATAAA+TGG | + | chr8_1:73284058-73284077 | None:intergenic | 25.0% |
| ! | TTAAAGGTTAATGAAGCTAA+TGG | + | chr8_1:73284095-73284114 | None:intergenic | 25.0% |
| ! | ATCAGATTGCAAGTAAATTT+GGG | - | chr8_1:73284135-73284154 | Msa1213190:intron | 25.0% |
| ! | TATGTAATTACTGATGTTCT+TGG | - | chr8_1:73284708-73284727 | Msa1213190:CDS | 25.0% |
| ! | AACCTAAAATGGAATTTATG+AGG | + | chr8_1:73284853-73284872 | None:intergenic | 25.0% |
| ! | TTTAAATTATGTTTCCTCTG+TGG | - | chr8_1:73284872-73284891 | Msa1213190:intron | 25.0% |
| !!! | TTGTTAGTCTTCTTATAGTT+AGG | - | chr8_1:73284986-73285005 | Msa1213190:intron | 25.0% |
| ! | AAAAACTGAAATTTGCAAGT+TGG | - | chr8_1:73285285-73285304 | Msa1213190:CDS | 25.0% |
| !! | ATTTTATTACACAGCAGAAA+AGG | + | chr8_1:73285323-73285342 | None:intergenic | 25.0% |
| ! | TCTGCTGTGTAATAAAATTA+TGG | - | chr8_1:73285325-73285344 | Msa1213190:CDS | 25.0% |
| ! | AATAAAATTATGGCGAATCA+AGG | - | chr8_1:73285335-73285354 | Msa1213190:CDS | 25.0% |
| ! | ATAAAATTATGGCGAATCAA+GGG | - | chr8_1:73285336-73285355 | Msa1213190:CDS | 25.0% |
| ! | ATGGAAAATGCTATGAAAAA+AGG | + | chr8_1:73285450-73285469 | None:intergenic | 25.0% |
| ! | CTCGAAATTTGTAGAAATTA+TGG | + | chr8_1:73285542-73285561 | None:intergenic | 25.0% |
| !!! | TTAATGCTTTGTTTTTGAGA+AGG | + | chr8_1:73285833-73285852 | None:intergenic | 25.0% |
| !!! | ATTGTTGGTTTTCAAATTGT+AGG | - | chr8_1:73285875-73285894 | Msa1213190:intron | 25.0% |
| !!! | TTGTTGGTTTTCAAATTGTA+GGG | - | chr8_1:73285876-73285895 | Msa1213190:intron | 25.0% |
| !!! | AGAGTAAAAAACTTGTTTTG+CGG | + | chr8_1:73286006-73286025 | None:intergenic | 25.0% |
| ! | TCTGTCAAAAAGAAGTTATT+AGG | - | chr8_1:73286121-73286140 | Msa1213190:CDS | 25.0% |
| ! | CAAAAGAATTGAAATAGAGT+AGG | + | chr8_1:73286222-73286241 | None:intergenic | 25.0% |
| !!! | TTTGCATGCCATTTTATTTA+AGG | - | chr8_1:73286238-73286257 | Msa1213190:exon | 25.0% |
| ! | TCTTCGAAAGATCATTGATT+GGG | + | chr8_1:73281718-73281737 | None:intergenic | 30.0% |
| TTCTTCGAAAGATCATTGAT+TGG | + | chr8_1:73281719-73281738 | None:intergenic | 30.0% | |
| GACAGAACTACATTTCAAAT+TGG | - | chr8_1:73281799-73281818 | Msa1213190:CDS | 30.0% | |
| AATAATAATTCGTATCGGAG+TGG | - | chr8_1:73281822-73281841 | Msa1213190:intron | 30.0% | |
| CAGATTGTAAACAAATGAAC+GGG | + | chr8_1:73281876-73281895 | None:intergenic | 30.0% | |
| ! | TTTGGACTGAGATTTAGTTT+AGG | - | chr8_1:73281927-73281946 | Msa1213190:intron | 30.0% |
| ! | TTGGACTGAGATTTAGTTTA+GGG | - | chr8_1:73281928-73281947 | Msa1213190:intron | 30.0% |
| ! | GATTTAGTTTAGGGTTTATG+AGG | - | chr8_1:73281937-73281956 | Msa1213190:intron | 30.0% |
| ! | TTCATCTGTTATTTAACACC+TGG | - | chr8_1:73281980-73281999 | Msa1213190:intron | 30.0% |
| TTTCGAATTTGGTAAAATCC+AGG | + | chr8_1:73282001-73282020 | None:intergenic | 30.0% | |
| ! | TTAGGCTTTTACGTGTTATA+TGG | - | chr8_1:73282294-73282313 | Msa1213190:intron | 30.0% |
| ! | TAGGCTTTTACGTGTTATAT+GGG | - | chr8_1:73282295-73282314 | Msa1213190:intron | 30.0% |
| GATAAACCAAAATAACAGGT+GGG | + | chr8_1:73282555-73282574 | None:intergenic | 30.0% | |
| TGATAAACCAAAATAACAGG+TGG | + | chr8_1:73282556-73282575 | None:intergenic | 30.0% | |
| ACTAAAATATTAGGATGCTC+TGG | + | chr8_1:73282744-73282763 | None:intergenic | 30.0% | |
| GGTAATCTAGATAGATTATC+AGG | - | chr8_1:73283323-73283342 | Msa1213190:intron | 30.0% | |
| AAATCATCTGACAAATGAAG+CGG | + | chr8_1:73283442-73283461 | None:intergenic | 30.0% | |
| AAATCTAACACCTAGTAACA+AGG | + | chr8_1:73283755-73283774 | None:intergenic | 30.0% | |
| TGTTACTAGGTGTTAGATTT+AGG | - | chr8_1:73283755-73283774 | Msa1213190:intron | 30.0% | |
| AACTCAAATTCCACATGTAA+GGG | + | chr8_1:73283790-73283809 | None:intergenic | 30.0% | |
| AAACTCAAATTCCACATGTA+AGG | + | chr8_1:73283791-73283810 | None:intergenic | 30.0% | |
| TCAGTAATATGAGAATTGAG+GGG | + | chr8_1:73283893-73283912 | None:intergenic | 30.0% | |
| AAGCTAATGGTACAAATAAC+TGG | + | chr8_1:73284082-73284101 | None:intergenic | 30.0% | |
| AACCTTTAACTCTTTCCAAT+TGG | - | chr8_1:73284106-73284125 | Msa1213190:intron | 30.0% | |
| ACCTTTAACTCTTTCCAATT+GGG | - | chr8_1:73284107-73284126 | Msa1213190:intron | 30.0% | |
| GATCAGATTGCAAGTAAATT+TGG | - | chr8_1:73284134-73284153 | Msa1213190:intron | 30.0% | |
| !!! | AAGTTTTAGAATTGGCAGAA+AGG | + | chr8_1:73284280-73284299 | None:intergenic | 30.0% |
| AAAAATTCTGGGTGAAACAA+AGG | - | chr8_1:73284310-73284329 | Msa1213190:intron | 30.0% | |
| !!! | GACAATTTTTTTCTAGCATC+TGG | + | chr8_1:73284362-73284381 | None:intergenic | 30.0% |
| ATCCATATATCAAAGGTTTG+AGG | + | chr8_1:73284410-73284429 | None:intergenic | 30.0% | |
| TCGAGAAATCCATATATCAA+AGG | + | chr8_1:73284417-73284436 | None:intergenic | 30.0% | |
| ! | TTTATGAGCAATGTGTTTTG+AGG | - | chr8_1:73284750-73284769 | Msa1213190:intron | 30.0% |
| !! | TTATGAGCAATGTGTTTTGA+GGG | - | chr8_1:73284751-73284770 | Msa1213190:intron | 30.0% |
| TTTGAATAGAAGAGTCTTCA+AGG | + | chr8_1:73284808-73284827 | None:intergenic | 30.0% | |
| ! | TGCCTCATAAATTCCATTTT+AGG | - | chr8_1:73284848-73284867 | Msa1213190:intron | 30.0% |
| ATATTGACATTTCTGCGATT+TGG | + | chr8_1:73284966-73284985 | None:intergenic | 30.0% | |
| ACATGAACTTTCCAATGATT+AGG | - | chr8_1:73285129-73285148 | Msa1213190:intron | 30.0% | |
| CATGAACTTTCCAATGATTA+GGG | - | chr8_1:73285130-73285149 | Msa1213190:intron | 30.0% | |
| TTCAAGTATATAGTTGCTCT+TGG | + | chr8_1:73285205-73285224 | None:intergenic | 30.0% | |
| TAAAATTATGGCGAATCAAG+GGG | - | chr8_1:73285337-73285356 | Msa1213190:CDS | 30.0% | |
| ACAAGAATACAAGATTGACA+GGG | + | chr8_1:73285412-73285431 | None:intergenic | 30.0% | |
| TACAAGAATACAAGATTGAC+AGG | + | chr8_1:73285413-73285432 | None:intergenic | 30.0% | |
| TCAAATTGATGCAATCTAGT+AGG | - | chr8_1:73285581-73285600 | Msa1213190:intron | 30.0% | |
| AAAAAAAACAGCTACTTACC+AGG | - | chr8_1:73285769-73285788 | Msa1213190:intron | 30.0% | |
| AAAAAAACAGCTACTTACCA+GGG | - | chr8_1:73285770-73285789 | Msa1213190:intron | 30.0% | |
| CAAAAATGCAGAGCTTAGTT+CGG | - | chr8_1:73281484-73281503 | Msa1213190:three_prime_UTR | 35.0% | |
| TGTCGATGAAAATGAACTCT+GGG | + | chr8_1:73281783-73281802 | None:intergenic | 35.0% | |
| AGTAATCACATGTGTAGTGT+CGG | - | chr8_1:73282226-73282245 | Msa1213190:intron | 35.0% | |
| AGATGAAGTTAAATACGCAC+AGG | + | chr8_1:73282916-73282935 | None:intergenic | 35.0% | |
| ATCTACATGACTGAATGCAT+TGG | + | chr8_1:73283017-73283036 | None:intergenic | 35.0% | |
| CATTTAATGTCCAACATGCT+TGG | - | chr8_1:73283043-73283062 | Msa1213190:intron | 35.0% | |
| AGATAGATTATCAGGCATTC+AGG | - | chr8_1:73283331-73283350 | Msa1213190:intron | 35.0% | |
| ! | AATTTTCTGGGTCATATGAC+TGG | - | chr8_1:73283637-73283656 | Msa1213190:intron | 35.0% |
| ! | ATTTTCTGGGTCATATGACT+GGG | - | chr8_1:73283638-73283657 | Msa1213190:intron | 35.0% |
| TTCTTGGTATCCTTGTTACT+AGG | - | chr8_1:73283742-73283761 | Msa1213190:intron | 35.0% | |
| ACTCAAATTCCACATGTAAG+GGG | + | chr8_1:73283789-73283808 | None:intergenic | 35.0% | |
| TAATATGAGAATTGAGGGGA+TGG | + | chr8_1:73283889-73283908 | None:intergenic | 35.0% | |
| ACTGTGTGTACCAAAAAGTA+AGG | + | chr8_1:73283972-73283991 | None:intergenic | 35.0% | |
| TATAGCTTCAGCAGAAATTC+AGG | + | chr8_1:73284161-73284180 | None:intergenic | 35.0% | |
| !! | GTGGTTCTGTTTTCTATCTT+GGG | - | chr8_1:73284198-73284217 | Msa1213190:intron | 35.0% |
| CTTTGATGTTAGAGACTTGT+AGG | + | chr8_1:73284231-73284250 | None:intergenic | 35.0% | |
| CTACAAGTCTCTAACATCAA+AGG | - | chr8_1:73284229-73284248 | Msa1213190:intron | 35.0% | |
| AGTGTCTTTCTAATCATCAC+TGG | + | chr8_1:73284256-73284275 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTAGCATCTGGTGA+AGG | + | chr8_1:73284356-73284375 | None:intergenic | 35.0% |
| AGCCTCAAACCTTTGATATA+TGG | - | chr8_1:73284405-73284424 | Msa1213190:intron | 35.0% | |
| TAAATAAGTTTCATGGCCTG+TGG | - | chr8_1:73284907-73284926 | Msa1213190:intron | 35.0% | |
| AAATAAGTTTCATGGCCTGT+GGG | - | chr8_1:73284908-73284927 | Msa1213190:intron | 35.0% | |
| ATATAGTTGCTCTTGGATTG+AGG | + | chr8_1:73285198-73285217 | None:intergenic | 35.0% | |
| !!! | CTTTTTTATACCAGTTCCTG+CGG | - | chr8_1:73285225-73285244 | Msa1213190:intron | 35.0% |
| ! | TCAGTTTTTGACCTATCAGA+AGG | + | chr8_1:73285274-73285293 | None:intergenic | 35.0% |
| ! | ATCAAGGGGATCTTTTTGAT+CGG | - | chr8_1:73285351-73285370 | Msa1213190:CDS | 35.0% |
| AGATATGCTGAGGATAATAG+AGG | - | chr8_1:73285377-73285396 | Msa1213190:intron | 35.0% | |
| ! | TGAGGATAATAGAGGTATGA+TGG | - | chr8_1:73285385-73285404 | Msa1213190:intron | 35.0% |
| AGTAGTTATGACTACGAGTT+TGG | + | chr8_1:73285504-73285523 | None:intergenic | 35.0% | |
| TCTGTTTCACCATCTTTCTA+CGG | + | chr8_1:73285675-73285694 | None:intergenic | 35.0% | |
| TAGAAAGATGGTGAAACAGA+CGG | - | chr8_1:73285675-73285694 | Msa1213190:intron | 35.0% | |
| !! | TAATGGTTTTCGTTTTTCCC+TGG | + | chr8_1:73285790-73285809 | None:intergenic | 35.0% |
| GTGCTGCGAAAGAAAAATAA+TGG | + | chr8_1:73285807-73285826 | None:intergenic | 35.0% | |
| ATATCAGGATCTGCACATTT+GGG | - | chr8_1:73285909-73285928 | Msa1213190:CDS | 35.0% | |
| !!! | GTAAAAAACTTGTTTTGCGG+AGG | + | chr8_1:73286003-73286022 | None:intergenic | 35.0% |
| ATGTGGTGGTTTAGATTGGA+GGG | + | chr8_1:73281630-73281649 | None:intergenic | 40.0% | |
| AATGTGGTGGTTTAGATTGG+AGG | + | chr8_1:73281631-73281650 | None:intergenic | 40.0% | |
| AGGAATGTGGTGGTTTAGAT+TGG | + | chr8_1:73281634-73281653 | None:intergenic | 40.0% | |
| !! | GGAACGAATTTTGGTGGAAA+GGG | + | chr8_1:73281688-73281707 | None:intergenic | 40.0% |
| !! | AGGAACGAATTTTGGTGGAA+AGG | + | chr8_1:73281689-73281708 | None:intergenic | 40.0% |
| ! | GAAAGAGGAACGAATTTTGG+TGG | + | chr8_1:73281694-73281713 | None:intergenic | 40.0% |
| ! | GGAGAAAGAGGAACGAATTT+TGG | + | chr8_1:73281697-73281716 | None:intergenic | 40.0% |
| ! | GATCATTGATTGGGAGAAAG+AGG | + | chr8_1:73281709-73281728 | None:intergenic | 40.0% |
| ! | GCTACGATCAATGATGCTTT+TGG | + | chr8_1:73281757-73281776 | None:intergenic | 40.0% |
| CTGTCGATGAAAATGAACTC+TGG | + | chr8_1:73281784-73281803 | None:intergenic | 40.0% | |
| ATAATTCGTATCGGAGTGGT+TGG | - | chr8_1:73281826-73281845 | Msa1213190:intron | 40.0% | |
| AACGGGTATAGAGAATGTGA+CGG | + | chr8_1:73281859-73281878 | None:intergenic | 40.0% | |
| ! | TATCTGTGTTGGTGCTTCAT+AGG | + | chr8_1:73282133-73282152 | None:intergenic | 40.0% |
| ! | ATGAAGCACCAACACAGATA+CGG | - | chr8_1:73282133-73282152 | Msa1213190:intron | 40.0% |
| CACCTAAACCTTCTGATTGA+AGG | + | chr8_1:73282264-73282283 | None:intergenic | 40.0% | |
| ! | TTTAGGTGCTACAGAGGTTT+AGG | - | chr8_1:73282276-73282295 | Msa1213190:intron | 40.0% |
| !! | GTAACACCCACCTGTTATTT+TGG | - | chr8_1:73282546-73282565 | Msa1213190:CDS | 40.0% |
| ATTAGGATGCTCTGGCTATT+TGG | + | chr8_1:73282736-73282755 | None:intergenic | 40.0% | |
| TACACTAATCTACACGCTTC+AGG | + | chr8_1:73282803-73282822 | None:intergenic | 40.0% | |
| TTCTGGATTTGCACTTTACC+AGG | - | chr8_1:73282846-73282865 | Msa1213190:intron | 40.0% | |
| CAATTTCATCCTTCAACACC+TGG | + | chr8_1:73282867-73282886 | None:intergenic | 40.0% | |
| CATGTTGGACATTAAATGCC+AGG | + | chr8_1:73283041-73283060 | None:intergenic | 40.0% | |
| ATGCTTGGACTCTACTTCTT+TGG | - | chr8_1:73283058-73283077 | Msa1213190:intron | 40.0% | |
| ACTTCTTTGGATTGAGTGTG+CGG | - | chr8_1:73283071-73283090 | Msa1213190:intron | 40.0% | |
| ! | GCATTCAGGCTTGTTTGTTT+AGG | - | chr8_1:73283345-73283364 | Msa1213190:intron | 40.0% |
| ! | TTCAGGCTTGTTTGTTTAGG+TGG | - | chr8_1:73283348-73283367 | Msa1213190:intron | 40.0% |
| !! | ACGCAGCAAGCTTTTAGTTA+TGG | - | chr8_1:73283504-73283523 | Msa1213190:CDS | 40.0% |
| CTCAAATTCCACATGTAAGG+GGG | + | chr8_1:73283788-73283807 | None:intergenic | 40.0% | |
| GCCCAATTGGAAAGAGTTAA+AGG | + | chr8_1:73284111-73284130 | None:intergenic | 40.0% | |
| CAATCTGATCAAAGCCCAAT+TGG | + | chr8_1:73284124-73284143 | None:intergenic | 40.0% | |
| !! | GGTGGTTCTGTTTTCTATCT+TGG | - | chr8_1:73284197-73284216 | Msa1213190:intron | 40.0% |
| ! | TCTGCATCTTGTTTGCAACA+GGG | - | chr8_1:73284588-73284607 | Msa1213190:intron | 40.0% |
| GGCTTCAAAGGATTTAGCAT+TGG | - | chr8_1:73284626-73284645 | Msa1213190:intron | 40.0% | |
| TACACAATTGTGTTCCACAG+AGG | + | chr8_1:73284889-73284908 | None:intergenic | 40.0% | |
| AATAGTTGATTGACACCCAC+AGG | + | chr8_1:73284926-73284945 | None:intergenic | 40.0% | |
| GCTGTTATCTACCTTCTGAT+AGG | - | chr8_1:73285260-73285279 | Msa1213190:intron | 40.0% | |
| TGATCGGAAAAGATATGCTG+AGG | - | chr8_1:73285367-73285386 | Msa1213190:intron | 40.0% | |
| GACAACTAAGCTACTTGAGA+TGG | + | chr8_1:73285469-73285488 | None:intergenic | 40.0% | |
| CTGTTTCACCATCTTTCTAC+GGG | + | chr8_1:73285674-73285693 | None:intergenic | 40.0% | |
| !! | TGAAACAGACGGCTTTGTTT+AGG | - | chr8_1:73285686-73285705 | Msa1213190:intron | 40.0% |
| GATATCAGGATCTGCACATT+TGG | - | chr8_1:73285908-73285927 | Msa1213190:CDS | 40.0% | |
| TATGAACTTACTAGTGCTCG+CGG | - | chr8_1:73286175-73286194 | Msa1213190:CDS | 40.0% | |
| AAATGCAGAGCTTAGTTCGG+CGG | - | chr8_1:73281487-73281506 | Msa1213190:three_prime_UTR | 45.0% | |
| GTGGTTTAGATTGGAGGGTT+GGG | + | chr8_1:73281625-73281644 | None:intergenic | 45.0% | |
| AAGAAGGTGAAGGAATGTGG+TGG | + | chr8_1:73281644-73281663 | None:intergenic | 45.0% | |
| TGTCAAGTCCGTATCTGTGT+TGG | + | chr8_1:73282144-73282163 | None:intergenic | 45.0% | |
| TGACACTCACATGTTGACAC+CGG | - | chr8_1:73282159-73282178 | Msa1213190:intron | 45.0% | |
| CGCCTTCAATCAGAAGGTTT+AGG | - | chr8_1:73282259-73282278 | Msa1213190:intron | 45.0% | |
| ! | AGAAGGTTTAGGTGCTACAG+AGG | - | chr8_1:73282270-73282289 | Msa1213190:intron | 45.0% |
| ! | GTCCTTTTTGCAGGAGATTG+TGG | - | chr8_1:73282336-73282355 | Msa1213190:intron | 45.0% |
| AGCCACAATCTCCTGCAAAA+AGG | + | chr8_1:73282341-73282360 | None:intergenic | 45.0% | |
| AATGACACTGTGAGACGTTC+CGG | - | chr8_1:73282766-73282785 | Msa1213190:intron | 45.0% | |
| ACACGCTTCAGGCATGAATT+AGG | + | chr8_1:73282792-73282811 | None:intergenic | 45.0% | |
| !! | TGCACTTTACCAGGTGTTGA+AGG | - | chr8_1:73282855-73282874 | Msa1213190:intron | 45.0% |
| CATTCAGTCATGTAGATGCC+TGG | - | chr8_1:73283020-73283039 | Msa1213190:intron | 45.0% | |
| GAAGTAGAGTCCAAGCATGT+TGG | + | chr8_1:73283056-73283075 | None:intergenic | 45.0% | |
| !! | AAAGCTTGCTGCGTGATTAC+TGG | + | chr8_1:73283498-73283517 | None:intergenic | 45.0% |
| GAAGAAAACCCCCTTACATG+TGG | - | chr8_1:73283777-73283796 | Msa1213190:intron | 45.0% | |
| CTGCTGAAGCTATATCTTGC+TGG | - | chr8_1:73284167-73284186 | Msa1213190:intron | 45.0% | |
| CTATATCTTGCTGGCGCAAT+TGG | - | chr8_1:73284176-73284195 | Msa1213190:intron | 45.0% | |
| ! | CTCTGCATCTTGTTTGCAAC+AGG | - | chr8_1:73284587-73284606 | Msa1213190:intron | 45.0% |
| ! | TCTTGTTTGCAACAGGGCTA+TGG | - | chr8_1:73284594-73284613 | Msa1213190:intron | 45.0% |
| ATTACCAGCTTCCGTTCTTC+AGG | - | chr8_1:73284670-73284689 | Msa1213190:CDS | 45.0% | |
| TTACCAGCTTCCGTTCTTCA+GGG | - | chr8_1:73284671-73284690 | Msa1213190:CDS | 45.0% | |
| !!! | GAGCAATGTGTTTTGAGGGA+AGG | - | chr8_1:73284755-73284774 | Msa1213190:intron | 45.0% |
| TCCAATGATTAGGGAGCAAG+TGG | - | chr8_1:73285139-73285158 | Msa1213190:intron | 45.0% | |
| TCCACTTGCTCCCTAATCAT+TGG | + | chr8_1:73285143-73285162 | None:intergenic | 45.0% | |
| AGTAGCTTAGTTGTCCGAGA+AGG | - | chr8_1:73285474-73285493 | Msa1213190:intron | 45.0% | |
| ! | ACGAGTTTGGTGATCCTTCT+CGG | + | chr8_1:73285491-73285510 | None:intergenic | 45.0% |
| ! | GCTTTAAGCCCGTAGAAAGA+TGG | - | chr8_1:73285663-73285682 | Msa1213190:intron | 45.0% |
| CCATAGCATGGTCAAGAGTT+CGG | - | chr8_1:73285949-73285968 | Msa1213190:CDS | 45.0% | |
| ! | GTTTTGCGGAGGTCTGAAAA+AGG | + | chr8_1:73285992-73286011 | None:intergenic | 45.0% |
| !!! | AAAAAAAAAATTGATAATAA+GGG | + | chr8_1:73285046-73285065 | None:intergenic | 5.0% |
| !! | TGAAGGTGAGGTTGGGTTGA+AGG | + | chr8_1:73281560-73281579 | None:intergenic | 50.0% |
| TGAGGGTTGAAGGTGAGGTT+GGG | + | chr8_1:73281567-73281586 | None:intergenic | 50.0% | |
| AAGGACGAGTGTGGGAGATA+CGG | + | chr8_1:73281590-73281609 | None:intergenic | 50.0% | |
| ! | GTGAGTTGAAGGACGAGTGT+GGG | + | chr8_1:73281598-73281617 | None:intergenic | 50.0% |
| ! | TGTGAGTTGAAGGACGAGTG+TGG | + | chr8_1:73281599-73281618 | None:intergenic | 50.0% |
| GGTGGTTTAGATTGGAGGGT+TGG | + | chr8_1:73281626-73281645 | None:intergenic | 50.0% | |
| CGGAAGAAGGTGAAGGAATG+TGG | + | chr8_1:73281647-73281666 | None:intergenic | 50.0% | |
| ! | TGAATGGCGGAAGAAGGTGA+AGG | + | chr8_1:73281654-73281673 | None:intergenic | 50.0% |
| ! | CATGAGTGAATGGCGGAAGA+AGG | + | chr8_1:73281660-73281679 | None:intergenic | 50.0% |
| CTTCTTCCGCCATTCACTCA+TGG | - | chr8_1:73281658-73281677 | Msa1213190:three_prime_UTR | 50.0% | |
| AAGGGAACGCCATGAGTGAA+TGG | + | chr8_1:73281670-73281689 | None:intergenic | 50.0% | |
| ! | ACATGTGTAGTGTCGGACAC+CGG | - | chr8_1:73282233-73282252 | Msa1213190:intron | 50.0% |
| ! | CTTCTGATTGAAGGCGTGTC+CGG | + | chr8_1:73282255-73282274 | None:intergenic | 50.0% |
| GCAGGAGATTGTGGCTAAAC+AGG | - | chr8_1:73282345-73282364 | Msa1213190:intron | 50.0% | |
| ACACCAGATGACGTGGTTCT+GGG | - | chr8_1:73282371-73282390 | Msa1213190:intron | 50.0% | |
| GCTTCAGGCATGAATTAGGC+CGG | + | chr8_1:73282788-73282807 | None:intergenic | 50.0% | |
| AGAATTGAGGGGATGGCTAG+TGG | + | chr8_1:73283882-73283901 | None:intergenic | 50.0% | |
| TATCTTGCTGGCGCAATTGG+TGG | - | chr8_1:73284179-73284198 | Msa1213190:intron | 50.0% | |
| ! | TTCCGTTCTTCAGGGAGTGT+AGG | - | chr8_1:73284679-73284698 | Msa1213190:CDS | 50.0% |
| GTCCTACACTCCCTGAAGAA+CGG | + | chr8_1:73284684-73284703 | None:intergenic | 50.0% | |
| ! | CTGCGATTTGGCGAACTTGA+TGG | + | chr8_1:73284954-73284973 | None:intergenic | 50.0% |
| TAGGGAGACAGTGCGATATC+AGG | - | chr8_1:73285894-73285913 | Msa1213190:CDS | 50.0% | |
| TCAGGATCTGCACATTTGGG+TGG | - | chr8_1:73285912-73285931 | Msa1213190:CDS | 50.0% | |
| TTGCAGTTGCAGCCATAGCA+TGG | - | chr8_1:73285937-73285956 | Msa1213190:CDS | 50.0% | |
| CCGAACTCTTGACCATGCTA+TGG | + | chr8_1:73285952-73285971 | None:intergenic | 50.0% | |
| GCATGGTCAAGAGTTCGGAA+AGG | - | chr8_1:73285954-73285973 | Msa1213190:CDS | 50.0% | |
| ! | CTCGCGGTGTCAATGTAGTT+GGG | - | chr8_1:73286191-73286210 | Msa1213190:CDS | 50.0% |
| GAGCTTAGTTCGGCGGTTCA+CGG | - | chr8_1:73281494-73281513 | Msa1213190:three_prime_UTR | 55.0% | |
| !! | TGAGGTTGGGTTGAAGGTGG+TGG | + | chr8_1:73281554-73281573 | None:intergenic | 55.0% |
| !! | AGGTGAGGTTGGGTTGAAGG+TGG | + | chr8_1:73281557-73281576 | None:intergenic | 55.0% |
| GTGAGGGTTGAAGGTGAGGT+TGG | + | chr8_1:73281568-73281587 | None:intergenic | 55.0% | |
| TACGGTGAGGGTTGAAGGTG+AGG | + | chr8_1:73281572-73281591 | None:intergenic | 55.0% | |
| GGAGATACGGTGAGGGTTGA+AGG | + | chr8_1:73281577-73281596 | None:intergenic | 55.0% | |
| GAGTGTGGGAGATACGGTGA+GGG | + | chr8_1:73281584-73281603 | None:intergenic | 55.0% | |
| ! | GGTTGGGCGATGTGAGTTGA+AGG | + | chr8_1:73281609-73281628 | None:intergenic | 55.0% |
| GGAACGCCATGAGTGAATGG+CGG | + | chr8_1:73281667-73281686 | None:intergenic | 55.0% | |
| CGGACACGCCTTCAATCAGA+AGG | - | chr8_1:73282253-73282272 | Msa1213190:intron | 55.0% | |
| GACACCAGATGACGTGGTTC+TGG | - | chr8_1:73282370-73282389 | Msa1213190:intron | 55.0% | |
| ! | CACCAGATGACGTGGTTCTG+GGG | - | chr8_1:73282372-73282391 | Msa1213190:intron | 55.0% |
| AACCCCAGAACCACGTCATC+TGG | + | chr8_1:73282377-73282396 | None:intergenic | 55.0% | |
| TGGCGCGATCAAGGCTTCAA+AGG | - | chr8_1:73284614-73284633 | Msa1213190:intron | 55.0% | |
| ACTCCCTGAAGAACGGAAGC+TGG | + | chr8_1:73284677-73284696 | None:intergenic | 55.0% | |
| ! | GCTCGCGGTGTCAATGTAGT+TGG | - | chr8_1:73286190-73286209 | Msa1213190:CDS | 55.0% |
| CTTAGTTCGGCGGTTCACGG+CGG | - | chr8_1:73281497-73281516 | Msa1213190:three_prime_UTR | 60.0% | |
| !! | GGTGGTGGTGGTGGTTGTGA+TGG | + | chr8_1:73281530-73281549 | None:intergenic | 60.0% |
| !! | GTTGAAGGTGGTGGTGGTGG+TGG | + | chr8_1:73281545-73281564 | None:intergenic | 60.0% |
| !! | TGGGTTGAAGGTGGTGGTGG+TGG | + | chr8_1:73281548-73281567 | None:intergenic | 60.0% |
| !! | GGTTGGGTTGAAGGTGGTGG+TGG | + | chr8_1:73281551-73281570 | None:intergenic | 60.0% |
| CGAGTGTGGGAGATACGGTG+AGG | + | chr8_1:73281585-73281604 | None:intergenic | 60.0% | |
| CAGGCTGACACCAGATGACG+TGG | - | chr8_1:73282364-73282383 | Msa1213190:intron | 60.0% | |
| ACAGGGCTATGGCGCGATCA+AGG | - | chr8_1:73284605-73284624 | Msa1213190:intron | 60.0% | |
| !! | GAAGGTGGTGGTGGTGGTGG+TGG | + | chr8_1:73281542-73281561 | None:intergenic | 65.0% |
| ACCAGTTCCTGCGGCGTTGC+TGG | - | chr8_1:73285234-73285253 | Msa1213190:intron | 65.0% | |
| ACCAGCAACGCCGCAGGAAC+TGG | + | chr8_1:73285238-73285257 | None:intergenic | 65.0% | |
| CAGCTTACCAGCAACGCCGC+AGG | + | chr8_1:73285244-73285263 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | + | chr8_1:73281536-73281555 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73281447 | 73286283 | 73281447 | ID=Msa1213190;Name=Msa1213190 |
| chr8_1 | mRNA | 73281447 | 73286283 | 73281447 | ID=Msa1213190-mRNA-1;Parent=Msa1213190;Name=Msa1213190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=42|0.83|1|1|1|1|7|297|314 |
| chr8_1 | exon | 73281447 | 73281833 | 73281447 | ID=Msa1213190-mRNA-1:exon:24878;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73282475 | 73282579 | 73282475 | ID=Msa1213190-mRNA-1:exon:24877;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73283083 | 73283121 | 73283083 | ID=Msa1213190-mRNA-1:exon:24876;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73283480 | 73283590 | 73283480 | ID=Msa1213190-mRNA-1:exon:24875;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73284643 | 73284762 | 73284643 | ID=Msa1213190-mRNA-1:exon:24874;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73285261 | 73285381 | 73285261 | ID=Msa1213190-mRNA-1:exon:24873;Parent=Msa1213190-mRNA-1 |
| chr8_1 | exon | 73285883 | 73286283 | 73285883 | ID=Msa1213190-mRNA-1:exon:24872;Parent=Msa1213190-mRNA-1 |
| chr8_1 | five_prime_UTR | 73286242 | 73286283 | 73286242 | ID=Msa1213190-mRNA-1:five_prime_utr;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73285883 | 73286241 | 73285883 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73285261 | 73285381 | 73285261 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73284643 | 73284762 | 73284643 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73283480 | 73283590 | 73283480 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73283083 | 73283121 | 73283083 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73282475 | 73282579 | 73282475 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | CDS | 73281744 | 73281833 | 73281744 | ID=Msa1213190-mRNA-1:cds;Parent=Msa1213190-mRNA-1 |
| chr8_1 | three_prime_UTR | 73281447 | 73281743 | 73281447 | ID=Msa1213190-mRNA-1:three_prime_utr;Parent=Msa1213190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
