Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391770 | XP_003595171.1 | 81.287 | 513 | 46 | 5 | 1 | 476 | 1 | 500 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391770 | sp|O22607|MSI4_ARATH | 68.350 | 515 | 97 | 9 | 3 | 473 | 14 | 506 | 0.0 | 664 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391770 | A2Q555 | 81.287 | 513 | 46 | 5 | 1 | 476 | 1 | 500 | 0.0 | 821 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1391770 | 0.811738 | 6.025864e-51 | -8.615850e-47 |
| Msa0008110 | Msa1391770 | 0.811182 | 7.955480e-51 | -8.615850e-47 |
| Msa0014990 | Msa1391770 | 0.822463 | 2.337586e-53 | -8.615850e-47 |
| Msa0017510 | Msa1391770 | 0.820829 | 5.578786e-53 | -8.615850e-47 |
| Msa0026800 | Msa1391770 | 0.800652 | 1.303413e-48 | -8.615850e-47 |
| Msa0027230 | Msa1391770 | 0.821801 | 3.328381e-53 | -8.615850e-47 |
| Msa0028420 | Msa1391770 | 0.867494 | 1.313383e-65 | -8.615850e-47 |
| Msa0028640 | Msa1391770 | 0.807119 | 5.905072e-50 | -8.615850e-47 |
| Msa0032430 | Msa1391770 | 0.822505 | 2.285630e-53 | -8.615850e-47 |
| Msa0034270 | Msa1391770 | 0.801409 | 9.128344e-49 | -8.615850e-47 |
| Msa0036870 | Msa1391770 | 0.832596 | 8.640127e-56 | -8.615850e-47 |
| Msa0047030 | Msa1391770 | 0.820551 | 6.460347e-53 | -8.615850e-47 |
| Msa0047070 | Msa1391770 | 0.825384 | 4.827740e-54 | -8.615850e-47 |
| Msa0054480 | Msa1391770 | 0.811637 | 6.337750e-51 | -8.615850e-47 |
| Msa0061290 | Msa1391770 | 0.826984 | 2.009367e-54 | -8.615850e-47 |
| Msa0075220 | Msa1391770 | 0.840423 | 8.775017e-58 | -8.615850e-47 |
| Msa0076250 | Msa1391770 | 0.809760 | 1.613340e-50 | -8.615850e-47 |
| Msa0089630 | Msa1391770 | 0.802687 | 4.985159e-49 | -8.615850e-47 |
| Msa0090400 | Msa1391770 | 0.860529 | 1.938525e-63 | -8.615850e-47 |
| Msa0092790 | Msa1391770 | 0.831284 | 1.820999e-55 | -8.615850e-47 |
| Msa0115080 | Msa1391770 | 0.817970 | 2.501263e-52 | -8.615850e-47 |
| Msa1346280 | Msa1391770 | 0.804378 | 2.223254e-49 | -8.615850e-47 |
| Msa1367370 | Msa1391770 | 0.806646 | 7.434084e-50 | -8.615850e-47 |
| Msa1369550 | Msa1391770 | 0.800541 | 1.373172e-48 | -8.615850e-47 |
| Msa1370010 | Msa1391770 | 0.811258 | 7.659191e-51 | -8.615850e-47 |
| Msa1372230 | Msa1391770 | 0.805275 | 1.444307e-49 | -8.615850e-47 |
| Msa1374550 | Msa1391770 | 0.808989 | 2.361305e-50 | -8.615850e-47 |
| Msa1390440 | Msa1391770 | 0.802329 | 5.906379e-49 | -8.615850e-47 |
| Msa1391770 | Msa1407220 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa1391770 | Msa1417420 | 0.811229 | 7.772477e-51 | -8.615850e-47 |
| Msa1391770 | Msa1443110 | 0.806461 | 8.133837e-50 | -8.615850e-47 |
| Msa1391770 | Msa1451160 | 0.802297 | 5.998720e-49 | -8.615850e-47 |
| Msa1391770 | Msa1454140 | 0.820650 | 6.133303e-53 | -8.615850e-47 |
| Msa1391770 | Msa1466920 | 0.820497 | 6.648879e-53 | -8.615850e-47 |
| Msa0602880 | Msa1391770 | 0.812804 | 3.525118e-51 | -8.615850e-47 |
| Msa0615710 | Msa1391770 | 0.811348 | 7.321436e-51 | -8.615850e-47 |
| Msa0625720 | Msa1391770 | 0.836988 | 6.773566e-57 | -8.615850e-47 |
| Msa0643940 | Msa1391770 | 0.805205 | 1.493802e-49 | -8.615850e-47 |
| Msa0650020 | Msa1391770 | 0.816082 | 6.642314e-52 | -8.615850e-47 |
| Msa0658880 | Msa1391770 | 0.801409 | 9.128972e-49 | -8.615850e-47 |
| Msa0660340 | Msa1391770 | 0.803585 | 3.249854e-49 | -8.615850e-47 |
| Msa0663390 | Msa1391770 | 0.818890 | 1.547738e-52 | -8.615850e-47 |
| Msa0689520 | Msa1391770 | 0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0689530 | Msa1391770 | 0.898823 | 3.636676e-77 | -8.615850e-47 |
| Msa0691980 | Msa1391770 | 0.819618 | 1.056433e-52 | -8.615850e-47 |
| Msa0693370 | Msa1391770 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0698830 | Msa1391770 | 0.855055 | 8.151862e-62 | -8.615850e-47 |
| Msa0704410 | Msa1391770 | 0.809659 | 1.696471e-50 | -8.615850e-47 |
| Msa0716830 | Msa1391770 | 0.836435 | 9.373713e-57 | -8.615850e-47 |
| Msa0730430 | Msa1391770 | 0.817023 | 4.088441e-52 | -8.615850e-47 |
| Msa0794810 | Msa1391770 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
| Msa0796530 | Msa1391770 | 0.803083 | 4.128463e-49 | -8.615850e-47 |
| Msa0826570 | Msa1391770 | 0.802482 | 5.494472e-49 | -8.615850e-47 |
| Msa0122510 | Msa1391770 | 0.826332 | 2.875131e-54 | -8.615850e-47 |
| Msa0122970 | Msa1391770 | 0.819368 | 1.204574e-52 | -8.615850e-47 |
| Msa0124060 | Msa1391770 | 0.835995 | 1.212615e-56 | -8.615850e-47 |
| Msa0124280 | Msa1391770 | 0.817097 | 3.935342e-52 | -8.615850e-47 |
| Msa0137880 | Msa1391770 | 0.870591 | 1.300057e-66 | -8.615850e-47 |
| Msa0152350 | Msa1391770 | 0.815250 | 1.017966e-51 | -8.615850e-47 |
| Msa0157290 | Msa1391770 | 0.820963 | 5.194051e-53 | -8.615850e-47 |
| Msa0167010 | Msa1391770 | 0.802866 | 4.576866e-49 | -8.615850e-47 |
| Msa0167520 | Msa1391770 | 0.847788 | 9.265689e-60 | -8.615850e-47 |
| Msa0168500 | Msa1391770 | 0.837435 | 5.208292e-57 | -8.615850e-47 |
| Msa0169310 | Msa1391770 | 0.805607 | 1.230281e-49 | -8.615850e-47 |
| Msa0172070 | Msa1391770 | 0.815900 | 7.292901e-52 | -8.615850e-47 |
| Msa0182190 | Msa1391770 | 0.847000 | 1.525361e-59 | -8.615850e-47 |
| Msa0182240 | Msa1391770 | 0.845667 | 3.520277e-59 | -8.615850e-47 |
| Msa0200260 | Msa1391770 | 0.815879 | 7.371325e-52 | -8.615850e-47 |
| Msa0202290 | Msa1391770 | 0.919469 | 4.330206e-87 | -8.615850e-47 |
| Msa0222700 | Msa1391770 | 0.815725 | 7.978168e-52 | -8.615850e-47 |
| Msa0225460 | Msa1391770 | 0.801102 | 1.055124e-48 | -8.615850e-47 |
| Msa0225680 | Msa1391770 | 0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0229230 | Msa1391770 | 0.853043 | 3.101681e-61 | -8.615850e-47 |
| Msa1224930 | Msa1391770 | 0.838768 | 2.363783e-57 | -8.615850e-47 |
| Msa1225700 | Msa1391770 | 0.835004 | 2.159932e-56 | -8.615850e-47 |
| Msa1229270 | Msa1391770 | 0.800470 | 1.420050e-48 | -8.615850e-47 |
| Msa1269480 | Msa1391770 | 0.818151 | 2.276734e-52 | -8.615850e-47 |
| Msa1298820 | Msa1391770 | 0.810534 | 1.098924e-50 | -8.615850e-47 |
| Msa1302830 | Msa1391770 | 0.814801 | 1.280604e-51 | -8.615850e-47 |
| Msa1313520 | Msa1391770 | 0.821484 | 3.939843e-53 | -8.615850e-47 |
| Msa1321340 | Msa1391770 | 0.823782 | 1.150836e-53 | -8.615850e-47 |
| Msa1330410 | Msa1391770 | 0.825301 | 5.050867e-54 | -8.615850e-47 |
| Msa1333080 | Msa1391770 | 0.810478 | 1.129855e-50 | -8.615850e-47 |
| Msa0379770 | Msa1391770 | 0.859310 | 4.519253e-63 | -8.615850e-47 |
| Msa0392490 | Msa1391770 | 0.800084 | 1.701378e-48 | -8.615850e-47 |
| Msa0402650 | Msa1391770 | 0.835162 | 1.969802e-56 | -8.615850e-47 |
| Msa0424790 | Msa1391770 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0428150 | Msa1391770 | 0.816015 | 6.876114e-52 | -8.615850e-47 |
| Msa0428590 | Msa1391770 | 0.823274 | 1.512957e-53 | -8.615850e-47 |
| Msa0434350 | Msa1391770 | 0.800091 | 1.695336e-48 | -8.615850e-47 |
| Msa0449210 | Msa1391770 | 0.824658 | 7.162525e-54 | -8.615850e-47 |
| Msa0462500 | Msa1391770 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
| Msa0465410 | Msa1391770 | 0.800874 | 1.174593e-48 | -8.615850e-47 |
| Msa0467490 | Msa1391770 | 0.816743 | 4.725080e-52 | -8.615850e-47 |
| Msa0468330 | Msa1391770 | 0.812268 | 4.618168e-51 | -8.615850e-47 |
| Msa0474520 | Msa1391770 | 0.837602 | 4.718704e-57 | -8.615850e-47 |
| Msa0475790 | Msa1391770 | 0.812289 | 4.569279e-51 | -8.615850e-47 |
| Msa0481530 | Msa1391770 | 0.820497 | 6.647948e-53 | -8.615850e-47 |
| Msa0979730 | Msa1391770 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
| Msa0996390 | Msa1391770 | 0.817436 | 3.300335e-52 | -8.615850e-47 |
| Msa1004550 | Msa1391770 | 0.806342 | 8.618975e-50 | -8.615850e-47 |
| Msa1018690 | Msa1391770 | 0.802750 | 4.836608e-49 | -8.615850e-47 |
| Msa1029250 | Msa1391770 | 0.822372 | 2.454472e-53 | -8.615850e-47 |
| Msa1030800 | Msa1391770 | 0.806727 | 7.147528e-50 | -8.615850e-47 |
| Msa1045140 | Msa1391770 | 0.801504 | 8.727368e-49 | -8.615850e-47 |
| Msa1078170 | Msa1391770 | 0.812160 | 4.874810e-51 | -8.615850e-47 |
| Msa1082810 | Msa1391770 | 0.814517 | 1.479498e-51 | -8.615850e-47 |
| Msa1084960 | Msa1391770 | 0.824617 | 7.325829e-54 | -8.615850e-47 |
| Msa1097980 | Msa1391770 | 0.808552 | 2.928424e-50 | -8.615850e-47 |
| Msa1103990 | Msa1391770 | 0.822679 | 2.082079e-53 | -8.615850e-47 |
| Msa0239190 | Msa1391770 | 0.804249 | 2.365722e-49 | -8.615850e-47 |
| Msa0245200 | Msa1391770 | 0.890483 | 9.462164e-74 | -8.615850e-47 |
| Msa0255090 | Msa1391770 | 0.832219 | 1.071068e-55 | -8.615850e-47 |
| Msa0259380 | Msa1391770 | 0.832070 | 1.166064e-55 | -8.615850e-47 |
| Msa0260610 | Msa1391770 | 0.809674 | 1.683393e-50 | -8.615850e-47 |
| Msa0260670 | Msa1391770 | 0.812994 | 3.203006e-51 | -8.615850e-47 |
| Msa0261340 | Msa1391770 | 0.812492 | 4.126769e-51 | -8.615850e-47 |
| Msa0264040 | Msa1391770 | 0.833155 | 6.274288e-56 | -8.615850e-47 |
| Msa0267110 | Msa1391770 | 0.851468 | 8.700522e-61 | -8.615850e-47 |
| Msa0277180 | Msa1391770 | 0.818811 | 1.612992e-52 | -8.615850e-47 |
| Msa0283800 | Msa1391770 | 0.869552 | 2.843245e-66 | -8.615850e-47 |
| Msa0302000 | Msa1391770 | 0.819098 | 1.387989e-52 | -8.615850e-47 |
| Msa0318700 | Msa1391770 | 0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0321920 | Msa1391770 | 0.916177 | 2.437256e-85 | -8.615850e-47 |
| Msa0339320 | Msa1391770 | 0.819733 | 9.947918e-53 | -8.615850e-47 |
| Msa0349710 | Msa1391770 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
| Msa1111090 | Msa1391770 | 0.809797 | 1.584410e-50 | -8.615850e-47 |
| Msa1111130 | Msa1391770 | 0.817892 | 2.604960e-52 | -8.615850e-47 |
| Msa1119940 | Msa1391770 | 0.803389 | 3.568958e-49 | -8.615850e-47 |
| Msa1128600 | Msa1391770 | 0.830362 | 3.064248e-55 | -8.615850e-47 |
| Msa1157870 | Msa1391770 | 0.813888 | 2.037836e-51 | -8.615850e-47 |
| Msa1162150 | Msa1391770 | 0.801440 | 8.994122e-49 | -8.615850e-47 |
| Msa1171710 | Msa1391770 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa1189070 | Msa1391770 | 0.807440 | 5.049571e-50 | -8.615850e-47 |
| Msa1206050 | Msa1391770 | 0.807454 | 5.014712e-50 | -8.615850e-47 |
| Msa1209460 | Msa1391770 | 0.851285 | 9.801502e-61 | -8.615850e-47 |
| Msa1213190 | Msa1391770 | 0.800704 | 1.271744e-48 | -8.615850e-47 |
| Msa1222850 | Msa1391770 | 0.831360 | 1.744710e-55 | -8.615850e-47 |
| Msa0487630 | Msa1391770 | 0.806817 | 6.842700e-50 | -8.615850e-47 |
| Msa0497490 | Msa1391770 | 0.814198 | 1.740388e-51 | -8.615850e-47 |
| Msa0501460 | Msa1391770 | 0.832973 | 6.961255e-56 | -8.615850e-47 |
| Msa0511270 | Msa1391770 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0523270 | Msa1391770 | 0.801284 | 9.683186e-49 | -8.615850e-47 |
| Msa0524190 | Msa1391770 | 0.806019 | 1.007882e-49 | -8.615850e-47 |
| Msa0529890 | Msa1391770 | 0.834583 | 2.756213e-56 | -8.615850e-47 |
| Msa0531180 | Msa1391770 | 0.805439 | 1.334177e-49 | -8.615850e-47 |
| Msa0532070 | Msa1391770 | 0.870859 | 1.061062e-66 | -8.615850e-47 |
| Msa0547900 | Msa1391770 | 0.813142 | 2.972953e-51 | -8.615850e-47 |
| Msa0556060 | Msa1391770 | 0.811689 | 6.175966e-51 | -8.615850e-47 |
| Msa0569200 | Msa1391770 | 0.823205 | 1.569991e-53 | -8.615850e-47 |
| Msa0585560 | Msa1391770 | 0.830148 | 3.456358e-55 | -8.615850e-47 |
| Msa0867480 | Msa1391770 | 0.830435 | 2.941579e-55 | -8.615850e-47 |
| Msa0880140 | Msa1391770 | 0.815209 | 1.039251e-51 | -8.615850e-47 |
| Msa0896540 | Msa1391770 | 0.818911 | 1.530577e-52 | -8.615850e-47 |
| Msa0909230 | Msa1391770 | 0.812946 | 3.281819e-51 | -8.615850e-47 |
| Msa0919770 | Msa1391770 | 0.838924 | 2.153523e-57 | -8.615850e-47 |
| Msa0945110 | Msa1391770 | 0.850232 | 1.940138e-60 | -8.615850e-47 |
| Msa0961690 | Msa1391770 | 0.807611 | 4.645550e-50 | -8.615850e-47 |
| Msa0968850 | Msa1391770 | 0.804902 | 1.728535e-49 | -8.615850e-47 |
| Msa0975300 | Msa1391770 | 0.820582 | 6.357975e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391770 | MtrunA17_Chr2g0299271 | 81.287 | 513 | 46 | 5 | 1 | 476 | 1 | 500 | 0.0 | 821 |
| Msa1391770 | MtrunA17_Chr2g0330271 | 65.796 | 421 | 98 | 6 | 100 | 475 | 49 | 468 | 0.0 | 556 |
| Msa1391770 | MtrunA17_Chr4g0052291 | 32.198 | 323 | 184 | 8 | 135 | 456 | 127 | 415 | 3.34e-45 | 163 |
| Msa1391770 | MtrunA17_Chr4g0036951 | 28.528 | 326 | 192 | 8 | 130 | 455 | 111 | 395 | 3.01e-38 | 144 |
| Msa1391770 | MtrunA17_Chr8g0377441 | 29.904 | 311 | 177 | 9 | 136 | 430 | 165 | 450 | 2.78e-29 | 120 |
| Msa1391770 | MtrunA17_Chr5g0406931 | 28.662 | 314 | 178 | 13 | 136 | 430 | 152 | 438 | 1.46e-22 | 100 |
| Msa1391770 | MtrunA17_Chr4g0067151 | 34.532 | 139 | 80 | 5 | 241 | 379 | 63 | 190 | 1.89e-13 | 71.2 |
| Msa1391770 | MtrunA17_Chr1g0185501 | 33.071 | 127 | 74 | 5 | 253 | 379 | 66 | 181 | 1.37e-12 | 68.6 |
| Msa1391770 | MtrunA17_Chr8g0352821 | 29.050 | 179 | 99 | 8 | 253 | 430 | 264 | 415 | 3.92e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1391770 | AT2G19520.1 | 68.350 | 515 | 97 | 9 | 3 | 473 | 14 | 506 | 0.0 | 664 |
| Msa1391770 | AT4G29730.1 | 73.464 | 407 | 71 | 5 | 100 | 474 | 86 | 487 | 0.0 | 615 |
| Msa1391770 | AT4G29730.3 | 72.434 | 341 | 57 | 5 | 100 | 408 | 86 | 421 | 2.82e-176 | 502 |
| Msa1391770 | AT4G29730.2 | 72.434 | 341 | 57 | 5 | 100 | 408 | 86 | 421 | 2.82e-176 | 502 |
| Msa1391770 | AT4G35050.1 | 30.031 | 323 | 189 | 7 | 130 | 451 | 114 | 400 | 2.97e-46 | 166 |
| Msa1391770 | AT5G58230.1 | 32.416 | 327 | 184 | 8 | 135 | 459 | 127 | 418 | 4.53e-46 | 166 |
| Msa1391770 | AT2G16780.1 | 30.183 | 328 | 190 | 9 | 130 | 455 | 113 | 403 | 6.54e-46 | 165 |
| Msa1391770 | AT2G19540.1 | 27.070 | 314 | 184 | 8 | 136 | 430 | 162 | 449 | 4.96e-26 | 110 |
| Msa1391770 | AT2G19540.1 | 27.004 | 237 | 140 | 10 | 214 | 446 | 184 | 391 | 4.59e-12 | 68.6 |
| Msa1391770 | AT3G49660.1 | 34.395 | 157 | 91 | 6 | 223 | 379 | 39 | 183 | 3.69e-14 | 73.9 |
Find 132 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTCTTGTCTCATATTA+TGG | 0.145473 | tig0021448:-7703 | Msa1391770:CDS |
| ACTCATCCCTATGTGCTTTC+TGG | 0.148634 | tig0021448:-8394 | Msa1391770:CDS |
| AACTGCAGGTGAACAGAATT+AGG | 0.201591 | tig0021448:-9151 | Msa1391770:intron |
| TTCTTCACTGCGCCGGTTGA+TGG | 0.237649 | tig0021448:+11195 | None:intergenic |
| TGCCATTATGTTCACTAAAA+TGG | 0.251885 | tig0021448:+3981 | None:intergenic |
| GTCTAAATCAATTGTTTCTT+AGG | 0.254712 | tig0021448:-3814 | Msa1391770:three_prime_UTR |
| CCGACAAATAATTTAGTTCA+TGG | 0.256277 | tig0021448:-4058 | Msa1391770:exon |
| CGTCGCAATCTCACTTCTAA+TGG | 0.263138 | tig0021448:-6517 | Msa1391770:CDS |
| TTGTTCCTGTTCTTTATGAT+TGG | 0.288898 | tig0021448:-10997 | Msa1391770:CDS |
| GATGATAATCTGATTCTTAC+TGG | 0.289842 | tig0021448:-7006 | Msa1391770:CDS |
| CGAATATCAGGTTCTCATTT+GGG | 0.289930 | tig0021448:-8988 | Msa1391770:intron |
| CCAGACAAATCATCTGTATT+TGG | 0.294688 | tig0021448:-6335 | Msa1391770:CDS |
| CAGACCAGAGGATGAGGTTT+TGG | 0.296223 | tig0021448:-4129 | Msa1391770:CDS |
| TTACGGTAGAAAGCATTTCT+AGG | 0.301664 | tig0021448:+3860 | None:intergenic |
| TTTGGCCTTCTCTCTCTTGC+CGG | 0.315265 | tig0021448:-10955 | Msa1391770:intron |
| GGCTGCTGTCCTTTGTGTTC+AGG | 0.317326 | tig0021448:-6458 | Msa1391770:intron |
| AAGATGGTCTCTTGAACATT+TGG | 0.323836 | tig0021448:-6301 | Msa1391770:CDS |
| TTCTTGTCTTCCTTAGGTTT+AGG | 0.325143 | tig0021448:+11150 | None:intergenic |
| TCGAATATCAGGTTCTCATT+TGG | 0.327566 | tig0021448:-8989 | Msa1391770:intron |
| TCGTCAGAGGCTTTATCTTT+CGG | 0.354547 | tig0021448:-10345 | Msa1391770:CDS |
| AGTAGGGCTATCAGCAGTTT+TGG | 0.361683 | tig0021448:+8163 | None:intergenic |
| TGATTCTTGTCTCATATTAT+GGG | 0.362654 | tig0021448:-7702 | Msa1391770:CDS |
| GTCGCAATCTCACTTCTAAT+GGG | 0.366665 | tig0021448:-6516 | Msa1391770:CDS |
| CCTTATGAGCCTCAAATTTG+TGG | 0.370728 | tig0021448:+6479 | None:intergenic |
| AGATGGTCTCTTGAACATTT+GGG | 0.379807 | tig0021448:-6300 | Msa1391770:CDS |
| GGGTAAGCAAATTACCTAGA+AGG | 0.386078 | tig0021448:+8080 | None:intergenic |
| CCACAAATTTGAGGCTCATA+AGG | 0.390431 | tig0021448:-6479 | Msa1391770:CDS |
| TGGCTCTAGTCCTGTGGTTA+AGG | 0.390911 | tig0021448:-7669 | Msa1391770:intron |
| ATCTCACTTCTAATGGGGTT+GGG | 0.396956 | tig0021448:-6510 | Msa1391770:CDS |
| TCTTCTTTCTTGTCTTCCTT+AGG | 0.398125 | tig0021448:+11144 | None:intergenic |
| TTCGCAATCACCAAAGTATT+CGG | 0.400930 | tig0021448:+10074 | None:intergenic |
| TCAAATAGACGTACCAGATC+TGG | 0.403811 | tig0021448:+8912 | None:intergenic |
| CTGTAGCAGCAGATGTTATA+TGG | 0.406310 | tig0021448:+8213 | None:intergenic |
| CTGATCTTCACTGTGTTGAC+TGG | 0.414362 | tig0021448:-7038 | Msa1391770:CDS |
| ACAAAGTTGTTGACTTTCAC+TGG | 0.415463 | tig0021448:-5157 | Msa1391770:CDS |
| CTCCTTCTTCTTCACTGCGC+CGG | 0.419607 | tig0021448:+11188 | None:intergenic |
| TCGCTAACCATAACCTCGTT+TGG | 0.419771 | tig0021448:-10973 | Msa1391770:CDS |
| GAGAAGGCCAAACGAGGTTA+TGG | 0.420013 | tig0021448:+10966 | None:intergenic |
| CAGAGAGAGTGTGAGAGAAA+TGG | 0.424169 | tig0021448:-11226 | Msa1391770:exon |
| AGAACATGTAGGGTGGAGAT+TGG | 0.427478 | tig0021448:-3905 | Msa1391770:three_prime_UTR |
| CCATGAACTAAATTATTTGT+CGG | 0.431015 | tig0021448:+4058 | None:intergenic |
| CATGTTCTGTCCAGTGAGAA+TGG | 0.434413 | tig0021448:+3920 | None:intergenic |
| GTGGGGTCCTCAGCTTGAAC+AGG | 0.450211 | tig0021448:-10381 | Msa1391770:CDS |
| TAAGAATCAGATTATCATCA+TGG | 0.450908 | tig0021448:+7010 | None:intergenic |
| CCAAATACAGATGATTTGTC+TGG | 0.454135 | tig0021448:+6335 | None:intergenic |
| AATCTCACTTCTAATGGGGT+TGG | 0.456850 | tig0021448:-6511 | Msa1391770:CDS |
| CCAAGGACAGCATGACGGTT+AGG | 0.459165 | tig0021448:+8951 | None:intergenic |
| CCTAACCGTCATGCTGTCCT+TGG | 0.461359 | tig0021448:-8951 | Msa1391770:CDS |
| CTTTCTACCGTAAGCAAATG+AGG | 0.468903 | tig0021448:-3850 | Msa1391770:three_prime_UTR |
| AAAACAATAAATTCTCCTCC+AGG | 0.470379 | tig0021448:-6143 | Msa1391770:CDS |
| CCTATGTGCTTTCTGGAGGT+TGG | 0.472067 | tig0021448:-8387 | Msa1391770:intron |
| ACTGCAGGTGAACAGAATTA+GGG | 0.472069 | tig0021448:-9150 | Msa1391770:intron |
| GAGCAAACTCTGCATTATCT+TGG | 0.475826 | tig0021448:+8431 | None:intergenic |
| GCGAGCCAATCATAAAGAAC+AGG | 0.476414 | tig0021448:+10992 | None:intergenic |
| GTGGAGATTGGAGAATGATT+AGG | 0.478014 | tig0021448:-3893 | Msa1391770:three_prime_UTR |
| GTCTCCTATCCACAAATTTG+AGG | 0.478555 | tig0021448:-6488 | Msa1391770:CDS |
| AATGGATCCACCAGACTTGT+TGG | 0.479125 | tig0021448:+8187 | None:intergenic |
| GAGGCTTTATCTTTCGGAGC+AGG | 0.480425 | tig0021448:-10339 | Msa1391770:intron |
| TACGGTAGAAAGCATTTCTA+GGG | 0.481626 | tig0021448:+3861 | None:intergenic |
| GCTACAGACTCCAACAAGTC+TGG | 0.481812 | tig0021448:-8197 | Msa1391770:CDS |
| TACAAACTCTCGTCCAGATC+TGG | 0.484345 | tig0021448:-8925 | Msa1391770:intron |
| ATGGAGACACCACCATCAAC+CGG | 0.492633 | tig0021448:-11207 | Msa1391770:CDS |
| GCCACAAAATTCTAAGATTG+TGG | 0.493140 | tig0021448:-9123 | Msa1391770:CDS |
| TCTGCCAAAACCTCATCCTC+TGG | 0.508658 | tig0021448:+4125 | None:intergenic |
| TACCTCTTGGTCCGACAGTA+GGG | 0.509021 | tig0021448:+8147 | None:intergenic |
| TTTGGAAGTTCAGCAGAAGA+TGG | 0.511076 | tig0021448:-6317 | Msa1391770:CDS |
| TGCCCAGAGTATATACCTCT+TGG | 0.513172 | tig0021448:+8134 | None:intergenic |
| GAAAGCACATAGGGATGAGT+AGG | 0.518930 | tig0021448:+8397 | None:intergenic |
| AAGAATCAGATTATCATCAT+GGG | 0.520993 | tig0021448:+7011 | None:intergenic |
| GGACCAAGAGGTATATACTC+TGG | 0.523021 | tig0021448:-8137 | Msa1391770:CDS |
| TTGATGAGAAGTACACTCAA+TGG | 0.524523 | tig0021448:-11027 | Msa1391770:CDS |
| TGAGCCTCAAATTTGTGGAT+AGG | 0.524528 | tig0021448:+6484 | None:intergenic |
| GCTCTACAGACCAGAGGATG+AGG | 0.528088 | tig0021448:-4135 | Msa1391770:CDS |
| TATTTCAGTCAAACTTGATG+TGG | 0.530772 | tig0021448:-4015 | Msa1391770:three_prime_UTR |
| GCGCAGGAGTTCTGTAGTGT+TGG | 0.532397 | tig0021448:-7728 | Msa1391770:CDS |
| CATCCCTATGTGCTTTCTGG+AGG | 0.537406 | tig0021448:-8391 | Msa1391770:CDS |
| ATACCTCTTGGTCCGACAGT+AGG | 0.539677 | tig0021448:+8146 | None:intergenic |
| GAACATTTGGGATTATGAGA+AGG | 0.540866 | tig0021448:-6288 | Msa1391770:intron |
| ATAGGCTATATGCTAAAAGC+TGG | 0.544663 | tig0021448:+3768 | None:intergenic |
| GACCAAGAGGTATATACTCT+GGG | 0.545440 | tig0021448:-8136 | Msa1391770:CDS |
| ATATTATGGGATGCACGTGT+TGG | 0.547603 | tig0021448:-7689 | Msa1391770:CDS |
| TATGTAACCTCATTTGCTTA+CGG | 0.547697 | tig0021448:+3843 | None:intergenic |
| ACTGGAATGCACATGATCCA+TGG | 0.552739 | tig0021448:-5139 | Msa1391770:CDS |
| AAAGACAAACAGTCGTGTTG+TGG | 0.555006 | tig0021448:-8247 | Msa1391770:CDS |
| ATCAGGGCTGTCTGTGTGAG+TGG | 0.558313 | tig0021448:+9100 | None:intergenic |
| CAACCTCCAGAAAGCACATA+GGG | 0.558501 | tig0021448:+8388 | None:intergenic |
| CTCACTGGACAGAACATGTA+GGG | 0.559729 | tig0021448:-3915 | Msa1391770:three_prime_UTR |
| GGTAAGCAAATTACCTAGAA+GGG | 0.562164 | tig0021448:+8081 | None:intergenic |
| TTCACTGCGCCGGTTGATGG+TGG | 0.564282 | tig0021448:+11198 | None:intergenic |
| ATTGTGAAAGTACTGGTGGA+GGG | 0.565365 | tig0021448:-5094 | Msa1391770:CDS |
| GATTGTGAAAGTACTGGTGG+AGG | 0.565707 | tig0021448:-5095 | Msa1391770:CDS |
| ATTATCATCCTGAAGTGCGC+AGG | 0.570960 | tig0021448:-7744 | Msa1391770:intron |
| GACACACTAACAAGTGTCCA+TGG | 0.573972 | tig0021448:+5122 | None:intergenic |
| GACACCGAAAGAATCGAAGA+AGG | 0.577562 | tig0021448:-11100 | Msa1391770:CDS |
| TCTGATGATTGTGAAAGTAC+TGG | 0.578204 | tig0021448:-5101 | Msa1391770:CDS |
| TATGTAATTCTTAGCTCATG+TGG | 0.578206 | tig0021448:-3945 | Msa1391770:three_prime_UTR |
| AGGACGCAAACCTAAACCTA+AGG | 0.580952 | tig0021448:-11160 | Msa1391770:CDS |
| CCAACCTCCAGAAAGCACAT+AGG | 0.581090 | tig0021448:+8387 | None:intergenic |
| TCATGTGGATCCATTCTCAC+TGG | 0.586638 | tig0021448:-3930 | Msa1391770:three_prime_UTR |
| TGGAAGTGTTCCGAATACTT+TGG | 0.588867 | tig0021448:-10084 | Msa1391770:CDS |
| AAAGCATATACCTTAACCAC+AGG | 0.593858 | tig0021448:+7659 | None:intergenic |
| CCTAACCGGCAAGAGAGAGA+AGG | 0.596594 | tig0021448:+10950 | None:intergenic |
| ATGATAATCTGATTCTTACT+GGG | 0.596654 | tig0021448:-7005 | Msa1391770:intron |
| CGTACCTATGACCAGCATGT+TGG | 0.597330 | tig0021448:+6111 | None:intergenic |
| TGTGAAAGTACTGGTGGAGG+GGG | 0.601796 | tig0021448:-5092 | Msa1391770:CDS |
| GACGAGAGTTTGTAGCTCCA+AGG | 0.607337 | tig0021448:+8934 | None:intergenic |
| AAACAATAAATTCTCCTCCA+GGG | 0.610657 | tig0021448:-6142 | Msa1391770:CDS |
| AACCGGCGCAGTGAAGAAGA+AGG | 0.613935 | tig0021448:-11190 | Msa1391770:CDS |
| GTGAAGAAGAAGGAGACAAG+AGG | 0.617029 | tig0021448:-11180 | Msa1391770:CDS |
| GAAATTCAAATCTCATGTGG+TGG | 0.621431 | tig0021448:-4096 | Msa1391770:CDS |
| AGGTATATACTCTGGGCATG+AGG | 0.623016 | tig0021448:-8129 | Msa1391770:CDS |
| GGCAAGAAGATAGAGCGAGC+TGG | 0.627353 | tig0021448:-6167 | Msa1391770:CDS |
| ACAGACTCCAACAAGTCTGG+TGG | 0.632810 | tig0021448:-8194 | Msa1391770:CDS |
| AAAGCACATAGGGATGAGTA+GGG | 0.634618 | tig0021448:+8398 | None:intergenic |
| TAAGTAGCCTGTTCAAGCTG+AGG | 0.637076 | tig0021448:+10374 | None:intergenic |
| TTGTGAAAGTACTGGTGGAG+GGG | 0.637305 | tig0021448:-5093 | Msa1391770:CDS |
| AGCCCTACTGTCGGACCAAG+AGG | 0.638399 | tig0021448:-8149 | Msa1391770:CDS |
| TAGCTCCAAGGACAGCATGA+CGG | 0.640688 | tig0021448:+8946 | None:intergenic |
| TCTCACTGGACAGAACATGT+AGG | 0.641219 | tig0021448:-3916 | Msa1391770:three_prime_UTR |
| GATGATTGTGAAAGTACTGG+TGG | 0.644516 | tig0021448:-5098 | Msa1391770:CDS |
| TCGCAATCTCACTTCTAATG+GGG | 0.646953 | tig0021448:-6515 | Msa1391770:CDS |
| GGAGAAATTCAAATCTCATG+TGG | 0.650248 | tig0021448:-4099 | Msa1391770:CDS |
| ACTGCTGATAGCCCTACTGT+CGG | 0.663440 | tig0021448:-8158 | Msa1391770:CDS |
| AGAATCAGATTATCATCATG+GGG | 0.671943 | tig0021448:+7012 | None:intergenic |
| TTTGGTGATTGCGAATTGTG+AGG | 0.672940 | tig0021448:-10066 | Msa1391770:intron |
| TGAGGATACTGTTGAAGACG+TGG | 0.676563 | tig0021448:-8111 | Msa1391770:CDS |
| AAGAGAGAGAAGGCCAAACG+AGG | 0.676994 | tig0021448:+10960 | None:intergenic |
| ACGTGTTGGCTCTAGTCCTG+TGG | 0.683499 | tig0021448:-7675 | Msa1391770:CDS |
| CTACTTACAAGAATCGTCAG+AGG | 0.686539 | tig0021448:-10358 | Msa1391770:CDS |
| AATAAGTCACCTGAACACAA+AGG | 0.689394 | tig0021448:+6449 | None:intergenic |
| TGATTTGCTCTACAGACCAG+AGG | 0.693020 | tig0021448:-4141 | Msa1391770:CDS |
| ACTGGACAGAACATGTAGGG+TGG | 0.695101 | tig0021448:-3912 | Msa1391770:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTTGTTAAATTTT+TGG | - | tig0021448:4137-4156 | Msa1391770:CDS | 10.0% |
| !! | ATCAGAAAATTATATTTAAT+TGG | + | tig0021448:9111-9130 | None:intergenic | 10.0% |
| !!! | AAATTTTTGGTTTTATTTGA+TGG | - | tig0021448:4150-4169 | Msa1391770:CDS | 15.0% |
| !!! | TTGTTTGAAGTTTTTTTTTT+TGG | - | tig0021448:4285-4304 | Msa1391770:intron | 15.0% |
| !!! | TTTGTTTTTGTGAAAATTTT+AGG | - | tig0021448:4417-4436 | Msa1391770:intron | 15.0% |
| !!! | TTTTGTTGTAATGATTTTTT+AGG | - | tig0021448:4572-4591 | Msa1391770:intron | 15.0% |
| !!! | TTTGTTGTAATGATTTTTTA+GGG | - | tig0021448:4573-4592 | Msa1391770:intron | 15.0% |
| !! | ATTTATCTTTGAATAATTGT+GGG | + | tig0021448:5565-5584 | None:intergenic | 15.0% |
| !! | ATATATAAACCATTAATTAC+AGG | + | tig0021448:5819-5838 | None:intergenic | 15.0% |
| !! | GTAATTAATGGTTTATATAT+TGG | - | tig0021448:5819-5838 | Msa1391770:intron | 15.0% |
| !!! | TTTCTAAAGAATAAAAACAA+TGG | + | tig0021448:6011-6030 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATTCTTTAGAAA+TGG | - | tig0021448:6011-6030 | Msa1391770:intron | 15.0% |
| !!! | GAAATAAGTTTTTTTAAAAC+AGG | + | tig0021448:6514-6533 | None:intergenic | 15.0% |
| !!! | ATGTTTTCAAATTTTATTCA+AGG | - | tig0021448:7214-7233 | Msa1391770:intron | 15.0% |
| !!! | TGGATTAATACTATATTTTA+TGG | - | tig0021448:7268-7287 | Msa1391770:intron | 15.0% |
| !!! | TAATAAATAAATTTGACTTG+TGG | - | tig0021448:7514-7533 | Msa1391770:intron | 15.0% |
| !! | TATGTTACACTATAAAAAAA+GGG | + | tig0021448:7921-7940 | None:intergenic | 15.0% |
| !! | GAAAAAGTTAAGAAAAAATT+TGG | + | tig0021448:8360-8379 | None:intergenic | 15.0% |
| !! | AAAATTATATTTAATTGGTC+TGG | + | tig0021448:9106-9125 | None:intergenic | 15.0% |
| !! | GTCAGAAAATTATATTTAAT+TGG | + | tig0021448:9276-9295 | None:intergenic | 15.0% |
| !! | ATCCATATTTATATTGTTAA+TGG | - | tig0021448:9707-9726 | Msa1391770:intron | 15.0% |
| !! | ATCCATTAACAATATAAATA+TGG | + | tig0021448:9712-9731 | None:intergenic | 15.0% |
| !!! | GTATTTAAAATGAAATAACA+AGG | + | tig0021448:9857-9876 | None:intergenic | 15.0% |
| !! | GATAATTACTAAATATACTT+AGG | + | tig0021448:10026-10045 | None:intergenic | 15.0% |
| !! | AATTTCAATTGTATAAAAGT+GGG | + | tig0021448:10048-10067 | None:intergenic | 15.0% |
| !!! | TTTTAAAAATTTAATGATGG+TGG | - | tig0021448:10302-10321 | Msa1391770:intron | 15.0% |
| !! | TTTAAAAATTTAATGATGGT+GGG | - | tig0021448:10303-10322 | Msa1391770:intron | 15.0% |
| !! | AAGGAAAAAAAAATTCATAA+TGG | + | tig0021448:10836-10855 | None:intergenic | 15.0% |
| !!! | AAATGTTGTGTTGTTTTTTA+GGG | - | tig0021448:4191-4210 | Msa1391770:intron | 20.0% |
| !!! | TGGTTATGGTAAAATATTTT+AGG | - | tig0021448:4361-4380 | Msa1391770:intron | 20.0% |
| !!! | GGTTATGGTAAAATATTTTA+GGG | - | tig0021448:4362-4381 | Msa1391770:intron | 20.0% |
| !! | AATGTTGTAATTATGTTTGA+TGG | - | tig0021448:4456-4475 | Msa1391770:intron | 20.0% |
| !! | ATGTTGTAATTATGTTTGAT+GGG | - | tig0021448:4457-4476 | Msa1391770:intron | 20.0% |
| !!! | TTTTAGGGTTTTTGTTTTTT+TGG | - | tig0021448:4588-4607 | Msa1391770:intron | 20.0% |
| !!! | TATGTTTTGTGATTTTTGAT+AGG | - | tig0021448:4658-4677 | Msa1391770:intron | 20.0% |
| !!! | AATCTTTTTGTTGTTGAAAT+GGG | - | tig0021448:4756-4775 | Msa1391770:intron | 20.0% |
| !!! | GTTAAAAGATTGAACTTTTT+TGG | - | tig0021448:4786-4805 | Msa1391770:intron | 20.0% |
| !!! | ATTGATTTTTGTTGTTGAAA+TGG | - | tig0021448:4862-4881 | Msa1391770:intron | 20.0% |
| !!! | TTGATTTTTGTTGTTGAAAT+GGG | - | tig0021448:4863-4882 | Msa1391770:intron | 20.0% |
| !! | CAAAACCAAAAAATCAAAAT+GGG | + | tig0021448:4940-4959 | None:intergenic | 20.0% |
| !! | AACAAACTAAAACTACTAAA+AGG | + | tig0021448:5097-5116 | None:intergenic | 20.0% |
| !!! | CCATTTTATCAAATTATTAC+TGG | + | tig0021448:5171-5190 | None:intergenic | 20.0% |
| !! | CCAGTAATAATTTGATAAAA+TGG | - | tig0021448:5168-5187 | Msa1391770:intron | 20.0% |
| !!! | TATTTTTCAGTTTAATGAAG+AGG | - | tig0021448:5388-5407 | Msa1391770:intron | 20.0% |
| !! | CATTTATCTTTGAATAATTG+TGG | + | tig0021448:5566-5585 | None:intergenic | 20.0% |
| !! | TTATATATGCCTGTAATTAA+TGG | - | tig0021448:5807-5826 | Msa1391770:intron | 20.0% |
| !!! | TTTTGTTATGTTATTTGTCA+TGG | - | tig0021448:6554-6573 | Msa1391770:intron | 20.0% |
| !!! | TTTTTCAAGTATGTTTTGAA+AGG | - | tig0021448:7168-7187 | Msa1391770:intron | 20.0% |
| !!! | TTTTCAAGTATGTTTTGAAA+GGG | - | tig0021448:7169-7188 | Msa1391770:intron | 20.0% |
| !! | AGATTTAATTATGCTATCAT+TGG | - | tig0021448:7584-7603 | Msa1391770:intron | 20.0% |
| !!! | TTATACATGTATGGATTTTA+AGG | - | tig0021448:7695-7714 | Msa1391770:CDS | 20.0% |
| !! | ATGTTACACTATAAAAAAAG+GGG | + | tig0021448:7920-7939 | None:intergenic | 20.0% |
| !! | CTATGTTACACTATAAAAAA+AGG | + | tig0021448:7922-7941 | None:intergenic | 20.0% |
| !! | AACAAATATTGAAATCAAAC+TGG | + | tig0021448:8443-8462 | None:intergenic | 20.0% |
| !!! | GTTTGATTTCAATATTTGTT+TGG | - | tig0021448:8443-8462 | Msa1391770:CDS | 20.0% |
| !! | TATTTAATTGGCATTTCATA+TGG | + | tig0021448:9264-9283 | None:intergenic | 20.0% |
| !!! | TCAATTACTATTGGTTAAAA+TGG | - | tig0021448:9464-9483 | Msa1391770:intron | 20.0% |
| !! | GTTATTAAATGTCAAAATAC+TGG | - | tig0021448:9760-9779 | Msa1391770:intron | 20.0% |
| !! | ATTACTAAATATACTTAGGA+TGG | + | tig0021448:10022-10041 | None:intergenic | 20.0% |
| !! | CAATTTCAATTGTATAAAAG+TGG | + | tig0021448:10049-10068 | None:intergenic | 20.0% |
| !!! | AAGATTTTGATATTGAGATT+TGG | + | tig0021448:10187-10206 | None:intergenic | 20.0% |
| !! | TATTCACATTAAGAAAAAGA+GGG | + | tig0021448:10572-10591 | None:intergenic | 20.0% |
| !! | TTATTCACATTAAGAAAAAG+AGG | + | tig0021448:10573-10592 | None:intergenic | 20.0% |
| !!! | GAAATGTTGTGTTGTTTTTT+AGG | - | tig0021448:4190-4209 | Msa1391770:intron | 25.0% |
| !!! | TGTTTTTTAGGGTTTTTGTT+TGG | - | tig0021448:4202-4221 | Msa1391770:intron | 25.0% |
| !!! | GGTTTTTGTTTGGAAAATTT+TGG | - | tig0021448:4212-4231 | Msa1391770:intron | 25.0% |
| !! | ATGTTGATTGAAGAATGTTA+TGG | - | tig0021448:4239-4258 | Msa1391770:intron | 25.0% |
| ! | TGTAATGATGTTTAATGAGT+TGG | - | tig0021448:4329-4348 | Msa1391770:intron | 25.0% |
| !! | TAATGAGTTGGATTGAATTA+TGG | - | tig0021448:4341-4360 | Msa1391770:intron | 25.0% |
| !!! | TTGGTTTTGTTGTGAAATTT+TGG | - | tig0021448:4607-4626 | Msa1391770:intron | 25.0% |
| !!! | TGGTTTTGTTGTGAAATTTT+GGG | - | tig0021448:4608-4627 | Msa1391770:intron | 25.0% |
| !! | TTTTGTGATTTTTGATAGGT+GGG | - | tig0021448:4662-4681 | Msa1391770:intron | 25.0% |
| !!! | GAATCTTTTTGTTGTTGAAA+TGG | - | tig0021448:4755-4774 | Msa1391770:intron | 25.0% |
| !!! | AAAGATTGAACTTTTTTGGT+TGG | - | tig0021448:4790-4809 | Msa1391770:intron | 25.0% |
| !!! | TGGTTTTATTGTTGTTGAAA+TGG | - | tig0021448:4810-4829 | Msa1391770:intron | 25.0% |
| !!! | GGTTTTATTGTTGTTGAAAT+GGG | - | tig0021448:4811-4830 | Msa1391770:intron | 25.0% |
| !!! | GAAAACCCATTTTGATTTTT+TGG | - | tig0021448:4932-4951 | Msa1391770:intron | 25.0% |
| ! | CCAAAACCAAAAAATCAAAA+TGG | + | tig0021448:4941-4960 | None:intergenic | 25.0% |
| !!! | CCATTTTGATTTTTTGGTTT+TGG | - | tig0021448:4938-4957 | Msa1391770:intron | 25.0% |
| !! | CATATTGACATTCTGAAAAT+TGG | - | tig0021448:5471-5490 | Msa1391770:intron | 25.0% |
| !!! | ATAATAACCAGTGTTGTTTA+CGG | - | tig0021448:5525-5544 | Msa1391770:intron | 25.0% |
| !! | ATTATGCTTTTGATATGAGT+AGG | - | tig0021448:5857-5876 | Msa1391770:intron | 25.0% |
| !! | TTATGCTTTTGATATGAGTA+GGG | - | tig0021448:5858-5877 | Msa1391770:intron | 25.0% |
| ! | AAAGAATAAAAACAATGGCA+AGG | + | tig0021448:6006-6025 | None:intergenic | 25.0% |
| ! | TATTCGAAGAGTCATAAATA+AGG | + | tig0021448:6059-6078 | None:intergenic | 25.0% |
| ! | TTCCTAGATTGAAAATGTTA+TGG | + | tig0021448:6197-6216 | None:intergenic | 25.0% |
| !! | TTTTGATCTCATGTACAAAT+TGG | + | tig0021448:6228-6247 | None:intergenic | 25.0% |
| !! | AGTTTTTGTGAATTGTGATT+CGG | - | tig0021448:6293-6312 | Msa1391770:CDS | 25.0% |
| !! | TTAAACTTTTCTGTTTCATG+AGG | - | tig0021448:6354-6373 | Msa1391770:intron | 25.0% |
| !! | TAAACTTTTCTGTTTCATGA+GGG | - | tig0021448:6355-6374 | Msa1391770:intron | 25.0% |
| !!! | GGTTCAAAAACTTTGAAATT+GGG | - | tig0021448:6422-6441 | Msa1391770:intron | 25.0% |
| !!! | TTTTAAAACAGGATGATTCA+GGG | + | tig0021448:6503-6522 | None:intergenic | 25.0% |
| !!! | TTTTTAAAACAGGATGATTC+AGG | + | tig0021448:6504-6523 | None:intergenic | 25.0% |
| ! | TTATTCATTGTTCATTGTGT+TGG | - | tig0021448:6713-6732 | Msa1391770:intron | 25.0% |
| ! | GTCATTGATAAAGGATAATA+TGG | + | tig0021448:7137-7156 | None:intergenic | 25.0% |
| ! | ATATTTATGTCAGGAAGATA+TGG | + | tig0021448:7299-7318 | None:intergenic | 25.0% |
| ! | AGGATGATAATATTTATGTC+AGG | + | tig0021448:7308-7327 | None:intergenic | 25.0% |
| ! | ATGATTCTTGTCTCATATTA+TGG | - | tig0021448:7358-7377 | Msa1391770:intron | 25.0% |
| ! | TGATTCTTGTCTCATATTAT+GGG | - | tig0021448:7359-7378 | Msa1391770:intron | 25.0% |
| ! | GGAAAACAAATTGAAATACA+TGG | + | tig0021448:7437-7456 | None:intergenic | 25.0% |
| !!! | GACATGACTTTAATTTTTAC+TGG | - | tig0021448:7670-7689 | Msa1391770:CDS | 25.0% |
| !!! | TTACTGGTTTTATACATGTA+TGG | - | tig0021448:7686-7705 | Msa1391770:CDS | 25.0% |
| ! | TGTTACACTATAAAAAAAGG+GGG | + | tig0021448:7919-7938 | None:intergenic | 25.0% |
| ! | TTTCATATCTGATGTGAATT+TGG | - | tig0021448:7975-7994 | Msa1391770:intron | 25.0% |
| ! | AAGAATCAGATTATCATCAT+GGG | + | tig0021448:8053-8072 | None:intergenic | 25.0% |
| ! | TAAGAATCAGATTATCATCA+TGG | + | tig0021448:8054-8073 | None:intergenic | 25.0% |
| ! | ATGATAATCTGATTCTTACT+GGG | - | tig0021448:8056-8075 | Msa1391770:intron | 25.0% |
| ! | GTGAAAATAAGACATAAAAC+CGG | + | tig0021448:8090-8109 | None:intergenic | 25.0% |
| ! | GTTGAAACTGAATTAAACAA+CGG | + | tig0021448:8117-8136 | None:intergenic | 25.0% |
| !!! | TGAAAATACTTGCTGTAAAA+TGG | - | tig0021448:8223-8242 | Msa1391770:CDS | 25.0% |
| !!! | TTTTCCATTTTTGCATTTGT+TGG | - | tig0021448:8375-8394 | Msa1391770:intron | 25.0% |
| ! | TAAACCAACAAATGCAAAAA+TGG | + | tig0021448:8382-8401 | None:intergenic | 25.0% |
| !! | TAACACTTTGTTTAATTCAG+TGG | - | tig0021448:8700-8719 | Msa1391770:intron | 25.0% |
| ! | ACAGATGAATATGTTAAAGA+TGG | + | tig0021448:9217-9236 | None:intergenic | 25.0% |
| ! | ATATTGAATGTACAGTTTCT+AGG | + | tig0021448:9539-9558 | None:intergenic | 25.0% |
| ! | TAAAATGAAATAACAAGGTC+AGG | + | tig0021448:9852-9871 | None:intergenic | 25.0% |
| ! | AGATTATCAGACAGAATAAT+GGG | + | tig0021448:10211-10230 | None:intergenic | 25.0% |
| ! | AAGATTATCAGACAGAATAA+TGG | + | tig0021448:10212-10231 | None:intergenic | 25.0% |
| !! | TCATAATGGAAAATGTAAAC+AGG | + | tig0021448:10822-10841 | None:intergenic | 25.0% |
| !!! | TAAATTCGTTTTTGCAGATA+TGG | - | tig0021448:10889-10908 | Msa1391770:intron | 25.0% |
| ! | CCATGAACTAAATTATTTGT+CGG | + | tig0021448:11006-11025 | None:intergenic | 25.0% |
| !! | GTCTAAATCAATTGTTTCTT+AGG | - | tig0021448:11247-11266 | Msa1391770:five_prime_UTR | 25.0% |
| ! | TTTTCCTTCTTCGATTCTTT+CGG | + | tig0021448:3968-3987 | None:intergenic | 30.0% |
| TTGTTCCTGTTCTTTATGAT+TGG | - | tig0021448:4064-4083 | Msa1391770:exon | 30.0% | |
| CAAAAAACAAAAACCCTAAC+CGG | + | tig0021448:4128-4147 | None:intergenic | 30.0% | |
| TGATTGAAGAATGTTATGGT+TGG | - | tig0021448:4243-4262 | Msa1391770:intron | 30.0% | |
| GTTGGATTGAATTATGGTTA+TGG | - | tig0021448:4347-4366 | Msa1391770:intron | 30.0% | |
| ! | TGTTGTTGTAGTGTTTTTCT+AGG | - | tig0021448:4391-4410 | Msa1391770:intron | 30.0% |
| ! | GTTGTTGTAGTGTTTTTCTA+GGG | - | tig0021448:4392-4411 | Msa1391770:intron | 30.0% |
| ! | TGTAATTATGTTTGATGGGT+TGG | - | tig0021448:4461-4480 | Msa1391770:intron | 30.0% |
| ! | AATTATGGTTTGTGATAGTG+TGG | - | tig0021448:4484-4503 | Msa1391770:intron | 30.0% |
| ! | GTTTTGTGATTTTTGATAGG+TGG | - | tig0021448:4661-4680 | Msa1391770:intron | 30.0% |
| ! | TTTGTGATTTTTGATAGGTG+GGG | - | tig0021448:4663-4682 | Msa1391770:intron | 30.0% |
| ! | GTGTTTGTTGATGTTGTTAA+TGG | - | tig0021448:4900-4919 | Msa1391770:intron | 30.0% |
| ATGTTGTTAATGGAATGAGA+GGG | - | tig0021448:4910-4929 | Msa1391770:intron | 30.0% | |
| !! | TTGGTTTTTGATTAGACTGA+TGG | - | tig0021448:4957-4976 | Msa1391770:intron | 30.0% |
| !! | AAATCTCTAAAACGAATCCA+AGG | + | tig0021448:5769-5788 | None:intergenic | 30.0% |
| ACTGTAAAGTTCTTACATCA+GGG | + | tig0021448:5980-5999 | None:intergenic | 30.0% | |
| AACTGTAAAGTTCTTACATC+AGG | + | tig0021448:5981-6000 | None:intergenic | 30.0% | |
| !! | TTTAGAAATGGTTTGTTTCC+TGG | - | tig0021448:6023-6042 | Msa1391770:intron | 30.0% |
| TTTATGACTCTTCGAATATC+AGG | - | tig0021448:6061-6080 | Msa1391770:intron | 30.0% | |
| ! | GTCCATAACATTTTCAATCT+AGG | - | tig0021448:6192-6211 | Msa1391770:intron | 30.0% |
| ACTTTGATCTCATGTACAAA+AGG | + | tig0021448:6276-6295 | None:intergenic | 30.0% | |
| !! | GGGTTCAAAAACTTTGAAAT+TGG | - | tig0021448:6421-6440 | Msa1391770:intron | 30.0% |
| !! | CAAAAACTTTGAAATTGGGA+TGG | - | tig0021448:6426-6445 | Msa1391770:intron | 30.0% |
| TCCACATAATTCAAATTGGA+GGG | + | tig0021448:6468-6487 | None:intergenic | 30.0% | |
| GAAGTCCACATAATTCAAAT+TGG | + | tig0021448:6472-6491 | None:intergenic | 30.0% | |
| ! | TTTAAAACAGGATGATTCAG+GGG | + | tig0021448:6502-6521 | None:intergenic | 30.0% |
| AAAAAACTGAGTTGCATTTC+AGG | - | tig0021448:6790-6809 | Msa1391770:intron | 30.0% | |
| GAATACTAAACTACTTAGCA+GGG | + | tig0021448:7004-7023 | None:intergenic | 30.0% | |
| TGAATACTAAACTACTTAGC+AGG | + | tig0021448:7005-7024 | None:intergenic | 30.0% | |
| !!! | GTGCTTTTTCCTTATTAAAG+TGG | - | tig0021448:7026-7045 | Msa1391770:CDS | 30.0% |
| ! | TGAGAATAGCCACTTTAATA+AGG | + | tig0021448:7038-7057 | None:intergenic | 30.0% |
| TTGTTCACCTTATGAACTTT+GGG | - | tig0021448:7063-7082 | Msa1391770:intron | 30.0% | |
| AGTAGCTAAGTCATTGATAA+AGG | + | tig0021448:7146-7165 | None:intergenic | 30.0% | |
| !! | ATAAATTTGACTTGTGGTTG+AGG | - | tig0021448:7520-7539 | Msa1391770:intron | 30.0% |
| !! | TAAATTTGACTTGTGGTTGA+GGG | - | tig0021448:7521-7540 | Msa1391770:intron | 30.0% |
| !! | TGGTTTAGCCTATTGTTTTT+CGG | + | tig0021448:7551-7570 | None:intergenic | 30.0% |
| ATCATTGGACTTCATTTACT+TGG | - | tig0021448:7599-7618 | Msa1391770:intron | 30.0% | |
| TCATTGGACTTCATTTACTT+GGG | - | tig0021448:7600-7619 | Msa1391770:intron | 30.0% | |
| ! | TTCATTTACTTGGGACATTT+TGG | - | tig0021448:7609-7628 | Msa1391770:intron | 30.0% |
| TAAAGTCATGTCTCACTATA+CGG | + | tig0021448:7662-7681 | None:intergenic | 30.0% | |
| AAGTTTATTCACGAACTCAT+TGG | - | tig0021448:7817-7836 | Msa1391770:intron | 30.0% | |
| ! | AACACTGATGTTTTATCAAC+TGG | - | tig0021448:7853-7872 | Msa1391770:intron | 30.0% |
| ! | ACACTGATGTTTTATCAACT+GGG | - | tig0021448:7854-7873 | Msa1391770:intron | 30.0% |
| AGAATCAGATTATCATCATG+GGG | + | tig0021448:8052-8071 | None:intergenic | 30.0% | |
| GATGATAATCTGATTCTTAC+TGG | - | tig0021448:8055-8074 | Msa1391770:intron | 30.0% | |
| ATGGCTGTAATATTACAGAA+TGG | - | tig0021448:8242-8261 | Msa1391770:CDS | 30.0% | |
| TGGCTGTAATATTACAGAAT+GGG | - | tig0021448:8243-8262 | Msa1391770:CDS | 30.0% | |
| ATTAGTTACAGTCTGATTGT+AGG | - | tig0021448:8401-8420 | Msa1391770:CDS | 30.0% | |
| TTGAAATCAAACTGGATTGA+GGG | + | tig0021448:8435-8454 | None:intergenic | 30.0% | |
| ATTGAAATCAAACTGGATTG+AGG | + | tig0021448:8436-8455 | None:intergenic | 30.0% | |
| !! | TGAGAAGGTACAGTTTTAAT+TGG | - | tig0021448:8788-8807 | Msa1391770:intron | 30.0% |
| CAATAAAACATAACTGGTGT+GGG | + | tig0021448:8835-8854 | None:intergenic | 30.0% | |
| !! | ACCAGTTATGTTTTATTGCA+AGG | - | tig0021448:8837-8856 | Msa1391770:intron | 30.0% |
| ACCTTGCAATAAAACATAAC+TGG | + | tig0021448:8841-8860 | None:intergenic | 30.0% | |
| AAAACAATAAATTCTCCTCC+AGG | - | tig0021448:8918-8937 | Msa1391770:intron | 30.0% | |
| AAACAATAAATTCTCCTCCA+GGG | - | tig0021448:8919-8938 | Msa1391770:intron | 30.0% | |
| AATTTGAGCAAAATCAGATG+AGG | + | tig0021448:9151-9170 | None:intergenic | 30.0% | |
| ! | TCAAATTTTCTTACACCTGT+TGG | - | tig0021448:9164-9183 | Msa1391770:intron | 30.0% |
| ! | CAAATTTTCTTACACCTGTT+GGG | - | tig0021448:9165-9184 | Msa1391770:intron | 30.0% |
| AGAGGAACATAAATAACATC+AGG | + | tig0021448:9305-9324 | None:intergenic | 30.0% | |
| TGTAGAGAAAACTATAGAGT+TGG | + | tig0021448:9341-9360 | None:intergenic | 30.0% | |
| AAAAGAAACAGAAATCCAAC+AGG | + | tig0021448:9364-9383 | None:intergenic | 30.0% | |
| ATGAAGTTGACATCAAAATG+TGG | + | tig0021448:9429-9448 | None:intergenic | 30.0% | |
| TTCTGAGCATCAATTACTAT+TGG | - | tig0021448:9455-9474 | Msa1391770:intron | 30.0% | |
| TTCTACTGGAAATCATCAAT+TGG | + | tig0021448:9584-9603 | None:intergenic | 30.0% | |
| ! | CTTTAAGAGATAAGTTCTAC+TGG | + | tig0021448:9598-9617 | None:intergenic | 30.0% |
| !! | TGTTAATGGATTTGTTAGAC+TGG | - | tig0021448:9721-9740 | Msa1391770:intron | 30.0% |
| !! | AAATACTGGATTTGTTAGAC+TGG | - | tig0021448:9774-9793 | Msa1391770:intron | 30.0% |
| GAAACTGCATCAAACAAATT+TGG | + | tig0021448:10117-10136 | None:intergenic | 30.0% | |
| ! | AATTTGTTTGATGCAGTTTC+AGG | - | tig0021448:10117-10136 | Msa1391770:intron | 30.0% |
| GATTTAGAGAGACACAAATT+TGG | - | tig0021448:10272-10291 | Msa1391770:intron | 30.0% | |
| AGACACAAAAAAGTAGATAG+TGG | + | tig0021448:10331-10350 | None:intergenic | 30.0% | |
| ! | TTTTTGTGTCTATCTCCAAA+TGG | - | tig0021448:10340-10359 | Msa1391770:CDS | 30.0% |
| !! | GTATTTCTAGTCATGTTAGT+TGG | - | tig0021448:10441-10460 | Msa1391770:intron | 30.0% |
| ATATGCATGTTTGGATTTGT+TGG | + | tig0021448:10600-10619 | None:intergenic | 30.0% | |
| ! | CAAGTTCTAATATGCATGTT+TGG | + | tig0021448:10609-10628 | None:intergenic | 30.0% |
| ! | TATTAGAACTTGTTTACAGC+AGG | - | tig0021448:10617-10636 | Msa1391770:intron | 30.0% |
| GTGTATTTAGCTATTCAGTT+TGG | + | tig0021448:10655-10674 | None:intergenic | 30.0% | |
| !! | AAAGTGTCAAAAGTGTCAAA+TGG | + | tig0021448:10677-10696 | None:intergenic | 30.0% |
| CAAAACAGTAATCAACTTGT+GGG | + | tig0021448:10750-10769 | None:intergenic | 30.0% | |
| TCAAAACAGTAATCAACTTG+TGG | + | tig0021448:10751-10770 | None:intergenic | 30.0% | |
| !! | AATAGTTTGTTACAACAGGA+AGG | + | tig0021448:10855-10874 | None:intergenic | 30.0% |
| !! | CCAAAATAGTTTGTTACAAC+AGG | + | tig0021448:10859-10878 | None:intergenic | 30.0% |
| ! | CCTGTTGTAACAAACTATTT+TGG | - | tig0021448:10856-10875 | Msa1391770:intron | 30.0% |
| ! | CCGACAAATAATTTAGTTCA+TGG | - | tig0021448:11003-11022 | Msa1391770:CDS | 30.0% |
| TATTTCAGTCAAACTTGATG+TGG | - | tig0021448:11046-11065 | Msa1391770:CDS | 30.0% | |
| !! | AGCCATTTTAGTGAACATAA+TGG | - | tig0021448:11078-11097 | Msa1391770:CDS | 30.0% |
| TGCCATTATGTTCACTAAAA+TGG | + | tig0021448:11083-11102 | None:intergenic | 30.0% | |
| TATGTAATTCTTAGCTCATG+TGG | - | tig0021448:11116-11135 | Msa1391770:CDS | 30.0% | |
| TATGTAACCTCATTTGCTTA+CGG | + | tig0021448:11221-11240 | None:intergenic | 30.0% | |
| TTCTTGTCTTCCTTAGGTTT+AGG | + | tig0021448:3914-3933 | None:intergenic | 35.0% | |
| TCTTCTTTCTTGTCTTCCTT+AGG | + | tig0021448:3920-3939 | None:intergenic | 35.0% | |
| ! | TTGATGAGAAGTACACTCAA+TGG | - | tig0021448:4034-4053 | Msa1391770:three_prime_UTR | 35.0% |
| !!! | ATGGTTGGTTTTCTTTGTCT+AGG | - | tig0021448:4258-4277 | Msa1391770:intron | 35.0% |
| !!! | TGGTTGGTTTTCTTTGTCTA+GGG | - | tig0021448:4259-4278 | Msa1391770:intron | 35.0% |
| !! | TGTTTGATGGGTTGGAATTA+TGG | - | tig0021448:4469-4488 | Msa1391770:intron | 35.0% |
| AGTGTGGTTGGATTGAATTA+TGG | - | tig0021448:4500-4519 | Msa1391770:intron | 35.0% | |
| TGATTTGATCCATGTAGTTG+AGG | - | tig0021448:4535-4554 | Msa1391770:intron | 35.0% | |
| AAAACCAAACCTCAACTACA+TGG | + | tig0021448:4547-4566 | None:intergenic | 35.0% | |
| GATGTTGTTAATGGAATGAG+AGG | - | tig0021448:4909-4928 | Msa1391770:intron | 35.0% | |
| ! | TTCGCAATCACCAAAGTATT+CGG | + | tig0021448:4990-5009 | None:intergenic | 35.0% |
| GTCTTGTACTTCTTGACAAA+TGG | + | tig0021448:5422-5441 | None:intergenic | 35.0% | |
| TACAAGACTATCATACATCC+AGG | - | tig0021448:5434-5453 | Msa1391770:intron | 35.0% | |
| TATGAAATTTATACCTCGCC+TGG | + | tig0021448:5455-5474 | None:intergenic | 35.0% | |
| ATAATAACCAGTCATGTCGA+TGG | - | tig0021448:5587-5606 | Msa1391770:intron | 35.0% | |
| TTAGCAGTGTTGCCAAATAT+CGG | + | tig0021448:5727-5746 | None:intergenic | 35.0% | |
| ! | ATCTTTATGCTTTGAACTGC+AGG | - | tig0021448:5896-5915 | Msa1391770:intron | 35.0% |
| !! | GCCACAAAATTCTAAGATTG+TGG | - | tig0021448:5938-5957 | Msa1391770:intron | 35.0% |
| ! | GCCACAATCTTAGAATTTTG+TGG | + | tig0021448:5942-5961 | None:intergenic | 35.0% |
| AAATAAGGAACGAAATAGCC+AGG | + | tig0021448:6044-6063 | None:intergenic | 35.0% | |
| TCGAATATCAGGTTCTCATT+TGG | - | tig0021448:6072-6091 | Msa1391770:intron | 35.0% | |
| CGAATATCAGGTTCTCATTT+GGG | - | tig0021448:6073-6092 | Msa1391770:intron | 35.0% | |
| TCTCATGTACAAAAGGAACA+TGG | + | tig0021448:6269-6288 | None:intergenic | 35.0% | |
| AACAAAACTGCAGTGTAATC+TGG | + | tig0021448:6319-6338 | None:intergenic | 35.0% | |
| AGCTCTATTGAACTGAACAA+TGG | - | tig0021448:6381-6400 | Msa1391770:intron | 35.0% | |
| GCTCTATTGAACTGAACAAT+GGG | - | tig0021448:6382-6401 | Msa1391770:intron | 35.0% | |
| CTCTATTGAACTGAACAATG+GGG | - | tig0021448:6383-6402 | Msa1391770:intron | 35.0% | |
| TGGGATGGACATTATCAAAT+CGG | - | tig0021448:6441-6460 | Msa1391770:intron | 35.0% | |
| TCCCTCCAATTTGAATTATG+TGG | - | tig0021448:6464-6483 | Msa1391770:CDS | 35.0% | |
| GTCCACATAATTCAAATTGG+AGG | + | tig0021448:6469-6488 | None:intergenic | 35.0% | |
| CAATATCTGCAAAAGAAGCT+CGG | + | tig0021448:6602-6621 | None:intergenic | 35.0% | |
| ! | CTTCTTTTGCAGATATTGAC+TGG | - | tig0021448:6604-6623 | Msa1391770:intron | 35.0% |
| TCCTTGTTCATTCATTGTGT+TGG | - | tig0021448:6753-6772 | Msa1391770:intron | 35.0% | |
| ACCAACACAATGAATGAACA+AGG | + | tig0021448:6757-6776 | None:intergenic | 35.0% | |
| GGTAAGCAAATTACCTAGAA+GGG | + | tig0021448:6983-7002 | None:intergenic | 35.0% | |
| GTTGTTCACCTTATGAACTT+TGG | - | tig0021448:7062-7081 | Msa1391770:intron | 35.0% | |
| GATTTCACCCAAAGTTCATA+AGG | + | tig0021448:7073-7092 | None:intergenic | 35.0% | |
| ATGAACTTTGGGTGAAATCT+AGG | - | tig0021448:7074-7093 | Msa1391770:intron | 35.0% | |
| AAAGCATATACCTTAACCAC+AGG | + | tig0021448:7405-7424 | None:intergenic | 35.0% | |
| !! | GGTTTAGCCTATTGTTTTTC+GGG | + | tig0021448:7550-7569 | None:intergenic | 35.0% |
| GCATGTTCTATTCATGTAGT+AGG | - | tig0021448:7631-7650 | Msa1391770:intron | 35.0% | |
| !!! | GGATTTTAAGGCATGCTTTT+TGG | - | tig0021448:7707-7726 | Msa1391770:CDS | 35.0% |
| !! | TTTAAGGCATGCTTTTTGGA+AGG | - | tig0021448:7711-7730 | Msa1391770:CDS | 35.0% |
| ATTCACGAACTCATTGGAAT+AGG | - | tig0021448:7823-7842 | Msa1391770:intron | 35.0% | |
| !! | AAGATGATGAAGTATCGTGT+TGG | - | tig0021448:8165-8184 | Msa1391770:CDS | 35.0% |
| AGAATGGGAAACTTAGCATA+AGG | - | tig0021448:8258-8277 | Msa1391770:intron | 35.0% | |
| GAATGGGAAACTTAGCATAA+GGG | - | tig0021448:8259-8278 | Msa1391770:intron | 35.0% | |
| AAACTTAGCATAAGGGAAGT+GGG | - | tig0021448:8266-8285 | Msa1391770:intron | 35.0% | |
| !! | GAATTGATTCTGGAATCAGA+GGG | - | tig0021448:8292-8311 | Msa1391770:intron | 35.0% |
| GAATCAGAGGGAGTTTATTA+GGG | - | tig0021448:8304-8323 | Msa1391770:intron | 35.0% | |
| AATCAGAGGGAGTTTATTAG+GGG | - | tig0021448:8305-8324 | Msa1391770:intron | 35.0% | |
| ACTTGCCACATTATCAATTC+AGG | - | tig0021448:8491-8510 | Msa1391770:intron | 35.0% | |
| AATAAGTCACCTGAACACAA+AGG | + | tig0021448:8615-8634 | None:intergenic | 35.0% | |
| ATATAAAATGCCAGAAGACG+TGG | + | tig0021448:8652-8671 | None:intergenic | 35.0% | |
| ! | CCAAATACAGATGATTTGTC+TGG | + | tig0021448:8729-8748 | None:intergenic | 35.0% |
| CCAGACAAATCATCTGTATT+TGG | - | tig0021448:8726-8745 | Msa1391770:intron | 35.0% | |
| GCAATAAAACATAACTGGTG+TGG | + | tig0021448:8836-8855 | None:intergenic | 35.0% | |
| !! | AATGTCTTCTGCTTTTGTTG+TGG | - | tig0021448:8864-8883 | Msa1391770:intron | 35.0% |
| CTAAAAAACAGAAACCCAAC+AGG | + | tig0021448:9182-9201 | None:intergenic | 35.0% | |
| AATTGGCATTTCATATGGAG+TGG | + | tig0021448:9259-9278 | None:intergenic | 35.0% | |
| GTTGGTATCAAAACTATGAG+AGG | + | tig0021448:9323-9342 | None:intergenic | 35.0% | |
| ! | ATAGTTTTCTCTACACCTGT+TGG | - | tig0021448:9346-9365 | Msa1391770:intron | 35.0% |
| AAGTTGACATCAAAATGTGG+TGG | + | tig0021448:9426-9445 | None:intergenic | 35.0% | |
| TGCTATTCAAGAAAACCACT+AGG | + | tig0021448:9631-9650 | None:intergenic | 35.0% | |
| ATGGATGAATGATTCAGAAG+AGG | + | tig0021448:9693-9712 | None:intergenic | 35.0% | |
| !! | ACAAAGTTGTTGACTTTCAC+TGG | - | tig0021448:9904-9923 | Msa1391770:intron | 35.0% |
| ! | TCTGATGATTGTGAAAGTAC+TGG | - | tig0021448:9960-9979 | Msa1391770:intron | 35.0% |
| AAACTGCACAAGCATACATA+TGG | - | tig0021448:10086-10105 | Msa1391770:CDS | 35.0% | |
| AACTGCACAAGCATACATAT+GGG | - | tig0021448:10087-10106 | Msa1391770:CDS | 35.0% | |
| CTGTCTGATAATCTTGTGTT+AGG | - | tig0021448:10217-10236 | Msa1391770:intron | 35.0% | |
| ! | GAGTTTGAGACTTATCCATT+TGG | + | tig0021448:10358-10377 | None:intergenic | 35.0% |
| TCTCAAACTCTTGAAAGACA+GGG | - | tig0021448:10368-10387 | Msa1391770:CDS | 35.0% | |
| CTAACATGACTAGAAATACC+AGG | + | tig0021448:10440-10459 | None:intergenic | 35.0% | |
| ATACAAATTACTGCTCTCCT+CGG | + | tig0021448:10502-10521 | None:intergenic | 35.0% | |
| GGAGAAATTCAAATCTCATG+TGG | - | tig0021448:10962-10981 | Msa1391770:CDS | 35.0% | |
| GAAATTCAAATCTCATGTGG+TGG | - | tig0021448:10965-10984 | Msa1391770:CDS | 35.0% | |
| !! | TACGGTAGAAAGCATTTCTA+GGG | + | tig0021448:11203-11222 | None:intergenic | 35.0% |
| !! | TTACGGTAGAAAGCATTTCT+AGG | + | tig0021448:11204-11223 | None:intergenic | 35.0% |
| ! | ATGGTTTGTGATAGTGTGGT+TGG | - | tig0021448:4488-4507 | Msa1391770:intron | 40.0% |
| TGATCCATGTAGTTGAGGTT+TGG | - | tig0021448:4540-4559 | Msa1391770:intron | 40.0% | |
| CTACTTACAAGAATCGTCAG+AGG | - | tig0021448:4703-4722 | Msa1391770:intron | 40.0% | |
| ! | TCGTCAGAGGCTTTATCTTT+CGG | - | tig0021448:4716-4735 | Msa1391770:intron | 40.0% |
| !! | TGGAAGTGTTCCGAATACTT+TGG | - | tig0021448:4977-4996 | Msa1391770:intron | 40.0% |
| ! | TTTGGTGATTGCGAATTGTG+AGG | - | tig0021448:4995-5014 | Msa1391770:intron | 40.0% |
| ATTGTGAGGTTGTGAAGACT+AGG | - | tig0021448:5009-5028 | Msa1391770:intron | 40.0% | |
| TTGTGAGGTTGTGAAGACTA+GGG | - | tig0021448:5010-5029 | Msa1391770:intron | 40.0% | |
| GATCTATGAAGCATAGACAC+TGG | - | tig0021448:5123-5142 | Msa1391770:CDS | 40.0% | |
| !! | ATAACCAGTGTTGTTTACGG+CGG | - | tig0021448:5528-5547 | Msa1391770:intron | 40.0% |
| TTTGCCTGCCAATTTCGTAA+AGG | + | tig0021448:5689-5708 | None:intergenic | 40.0% | |
| AACTGCAGGTGAACAGAATT+AGG | - | tig0021448:5910-5929 | Msa1391770:intron | 40.0% | |
| ACTGCAGGTGAACAGAATTA+GGG | - | tig0021448:5911-5930 | Msa1391770:intron | 40.0% | |
| TCAAATAGACGTACCAGATC+TGG | + | tig0021448:6152-6171 | None:intergenic | 40.0% | |
| ! | TTGTCATGGTTGATGCTTCT+TGG | - | tig0021448:6568-6587 | Msa1391770:intron | 40.0% |
| GAGCAAACTCTGCATTATCT+TGG | + | tig0021448:6633-6652 | None:intergenic | 40.0% | |
| AAAGCACATAGGGATGAGTA+GGG | + | tig0021448:6666-6685 | None:intergenic | 40.0% | |
| AAAGACAAACAGTCGTGTTG+TGG | - | tig0021448:6814-6833 | Msa1391770:intron | 40.0% | |
| CTGTAGCAGCAGATGTTATA+TGG | + | tig0021448:6851-6870 | None:intergenic | 40.0% | |
| !! | GCTATCAGCAGTTTTGGTAA+TGG | + | tig0021448:6895-6914 | None:intergenic | 40.0% |
| ! | GACCAAGAGGTATATACTCT+GGG | - | tig0021448:6925-6944 | Msa1391770:intron | 40.0% |
| GGGTAAGCAAATTACCTAGA+AGG | + | tig0021448:6984-7003 | None:intergenic | 40.0% | |
| ! | GTTGCTATTAGAGTGCAGAT+AGG | + | tig0021448:7247-7266 | None:intergenic | 40.0% |
| TCTGCACTCTAATAGCAACA+TGG | - | tig0021448:7248-7267 | Msa1391770:intron | 40.0% | |
| ATATTATGGGATGCACGTGT+TGG | - | tig0021448:7372-7391 | Msa1391770:intron | 40.0% | |
| TTCACTTCTGTGGTCTGATT+TGG | - | tig0021448:7485-7504 | Msa1391770:intron | 40.0% | |
| ! | TCTGATGTGAATTTGGTGAC+AGG | - | tig0021448:7982-8001 | Msa1391770:intron | 40.0% |
| TTCTTACTGGGTATGTTTGC+CGG | - | tig0021448:8068-8087 | Msa1391770:intron | 40.0% | |
| GAAACTTAGCATAAGGGAAG+TGG | - | tig0021448:8265-8284 | Msa1391770:intron | 40.0% | |
| !! | GGAATTGATTCTGGAATCAG+AGG | - | tig0021448:8291-8310 | Msa1391770:intron | 40.0% |
| GGAATCAGAGGGAGTTTATT+AGG | - | tig0021448:8303-8322 | Msa1391770:intron | 40.0% | |
| GCCACATTATCAATTCAGGT+CGG | - | tig0021448:8495-8514 | Msa1391770:intron | 40.0% | |
| GTCGCAATCTCACTTCTAAT+GGG | - | tig0021448:8545-8564 | Msa1391770:intron | 40.0% | |
| TCGCAATCTCACTTCTAATG+GGG | - | tig0021448:8546-8565 | Msa1391770:intron | 40.0% | |
| AATCTCACTTCTAATGGGGT+TGG | - | tig0021448:8550-8569 | Msa1391770:intron | 40.0% | |
| ATCTCACTTCTAATGGGGTT+GGG | - | tig0021448:8551-8570 | Msa1391770:intron | 40.0% | |
| GTCTCCTATCCACAAATTTG+AGG | - | tig0021448:8573-8592 | Msa1391770:intron | 40.0% | |
| TGAGCCTCAAATTTGTGGAT+AGG | + | tig0021448:8580-8599 | None:intergenic | 40.0% | |
| CCTTATGAGCCTCAAATTTG+TGG | + | tig0021448:8585-8604 | None:intergenic | 40.0% | |
| ! | CCACAAATTTGAGGCTCATA+AGG | - | tig0021448:8582-8601 | Msa1391770:intron | 40.0% |
| TTTGGAAGTTCAGCAGAAGA+TGG | - | tig0021448:8744-8763 | Msa1391770:intron | 40.0% | |
| ! | TTTTCCAACATGCTGGTCAT+AGG | - | tig0021448:8946-8965 | Msa1391770:CDS | 40.0% |
| AAGTCAGCTACAGATCTAGA+TGG | + | tig0021448:9046-9065 | None:intergenic | 40.0% | |
| TCATATGGAGTGGTATCATG+TGG | + | tig0021448:9249-9268 | None:intergenic | 40.0% | |
| ! | GTTTCTAGGAAGACTGTGTT+TGG | + | tig0021448:9525-9544 | None:intergenic | 40.0% |
| !! | TAAAGATAGCATCGACCTAG+TGG | - | tig0021448:9613-9632 | Msa1391770:intron | 40.0% |
| ! | TAGCATTTTGTGTCATCCTC+AGG | - | tig0021448:9646-9665 | Msa1391770:intron | 40.0% |
| TGAAATAACAAGGTCAGGCA+AGG | + | tig0021448:9847-9866 | None:intergenic | 40.0% | |
| !! | GATGATTGTGAAAGTACTGG+TGG | - | tig0021448:9963-9982 | Msa1391770:intron | 40.0% |
| !! | ATTGTGAAAGTACTGGTGGA+GGG | - | tig0021448:9967-9986 | Msa1391770:intron | 40.0% |
| CCATTTCTTGAGAAATGGAG+AGG | + | tig0021448:10245-10264 | None:intergenic | 40.0% | |
| CCTCTCCATTTCTCAAGAAA+TGG | - | tig0021448:10242-10261 | Msa1391770:intron | 40.0% | |
| GCTCTCCATTTCTTGAGAAA+TGG | + | tig0021448:10250-10269 | None:intergenic | 40.0% | |
| GTCTCAAACTCTTGAAAGAC+AGG | - | tig0021448:10367-10386 | Msa1391770:CDS | 40.0% | |
| ! | CTCCTTGTGCTTTTCATTCA+TGG | - | tig0021448:10402-10421 | Msa1391770:intron | 40.0% |
| ! | TGCCATGAATGAAAAGCACA+AGG | + | tig0021448:10407-10426 | None:intergenic | 40.0% |
| !! | TAGAAATACCAGGAAGTGCT+TGG | + | tig0021448:10430-10449 | None:intergenic | 40.0% |
| AGTAAATGCACTCTGCGTAT+TGG | - | tig0021448:10525-10544 | Msa1391770:intron | 40.0% | |
| AAGAGGGAAAAGTGACAACA+CGG | + | tig0021448:10556-10575 | None:intergenic | 40.0% | |
| GTGGAGATTGGAGAATGATT+AGG | - | tig0021448:11168-11187 | Msa1391770:CDS | 40.0% | |
| CTTTCTACCGTAAGCAAATG+AGG | - | tig0021448:11211-11230 | Msa1391770:exon | 40.0% | |
| ! | CAGAGAGAGTGTGAGAGAAA+TGG | - | tig0021448:3835-3854 | Msa1391770:three_prime_UTR | 45.0% |
| GTGAAGAAGAAGGAGACAAG+AGG | - | tig0021448:3881-3900 | Msa1391770:three_prime_UTR | 45.0% | |
| AGGACGCAAACCTAAACCTA+AGG | - | tig0021448:3901-3920 | Msa1391770:three_prime_UTR | 45.0% | |
| GACACCGAAAGAATCGAAGA+AGG | - | tig0021448:3961-3980 | Msa1391770:three_prime_UTR | 45.0% | |
| GCGAGCCAATCATAAAGAAC+AGG | + | tig0021448:4072-4091 | None:intergenic | 45.0% | |
| TCGCTAACCATAACCTCGTT+TGG | - | tig0021448:4088-4107 | Msa1391770:CDS | 45.0% | |
| TAAGTAGCCTGTTCAAGCTG+AGG | + | tig0021448:4690-4709 | None:intergenic | 45.0% | |
| ACTTGACTAACCTCACGTGT+TGG | - | tig0021448:5205-5224 | Msa1391770:intron | 45.0% | |
| TGTTGGTGTAGATCACGTGT+TGG | - | tig0021448:5235-5254 | Msa1391770:intron | 45.0% | |
| ATAACCAGTCATGTCGATGG+CGG | - | tig0021448:5590-5609 | Msa1391770:intron | 45.0% | |
| AATCCAAACGCCCGCAATAT+CGG | - | tig0021448:5614-5633 | Msa1391770:intron | 45.0% | |
| CATGGCACCATACTCAGATA+TGG | + | tig0021448:5656-5675 | None:intergenic | 45.0% | |
| ! | CATATCTGAGTATGGTGCCA+TGG | - | tig0021448:5654-5673 | Msa1391770:intron | 45.0% |
| ACCGCCATCCTTTACGAAAT+TGG | - | tig0021448:5678-5697 | Msa1391770:intron | 45.0% | |
| GCCAATTTCGTAAAGGATGG+CGG | + | tig0021448:5682-5701 | None:intergenic | 45.0% | |
| CCTGCCAATTTCGTAAAGGA+TGG | + | tig0021448:5685-5704 | None:intergenic | 45.0% | |
| CCATCCTTTACGAAATTGGC+AGG | - | tig0021448:5682-5701 | Msa1391770:intron | 45.0% | |
| TTGCCAAATATCGGACATGG+TGG | + | tig0021448:5718-5737 | None:intergenic | 45.0% | |
| GTGTTGCCAAATATCGGACA+TGG | + | tig0021448:5721-5740 | None:intergenic | 45.0% | |
| TCTTGTTCCTTGACATGCCT+TGG | - | tig0021448:5749-5768 | Msa1391770:intron | 45.0% | |
| AACGAATCCAAGGCATGTCA+AGG | + | tig0021448:5759-5778 | None:intergenic | 45.0% | |
| TACAAACTCTCGTCCAGATC+TGG | - | tig0021448:6136-6155 | Msa1391770:CDS | 45.0% | |
| ACTGAACAATGGGGTAGAAC+AGG | - | tig0021448:6392-6411 | Msa1391770:intron | 45.0% | |
| CTGAACAATGGGGTAGAACA+GGG | - | tig0021448:6393-6412 | Msa1391770:intron | 45.0% | |
| ! | GAAAGCACATAGGGATGAGT+AGG | + | tig0021448:6667-6686 | None:intergenic | 45.0% |
| ACTCATCCCTATGTGCTTTC+TGG | - | tig0021448:6667-6686 | Msa1391770:intron | 45.0% | |
| ! | CAACCTCCAGAAAGCACATA+GGG | + | tig0021448:6676-6695 | None:intergenic | 45.0% |
| AATGGATCCACCAGACTTGT+TGG | + | tig0021448:6877-6896 | None:intergenic | 45.0% | |
| ! | AGTAGGGCTATCAGCAGTTT+TGG | + | tig0021448:6901-6920 | None:intergenic | 45.0% |
| ! | GGACCAAGAGGTATATACTC+TGG | - | tig0021448:6924-6943 | Msa1391770:intron | 45.0% |
| TGCCCAGAGTATATACCTCT+TGG | + | tig0021448:6930-6949 | None:intergenic | 45.0% | |
| AGGTATATACTCTGGGCATG+AGG | - | tig0021448:6932-6951 | Msa1391770:intron | 45.0% | |
| TGAGGATACTGTTGAAGACG+TGG | - | tig0021448:6950-6969 | Msa1391770:intron | 45.0% | |
| ATTATCATCCTGAAGTGCGC+AGG | - | tig0021448:7317-7336 | Msa1391770:intron | 45.0% | |
| AGAGCAGCATTATGCTGCTA+AGG | + | tig0021448:7458-7477 | None:intergenic | 45.0% | |
| TCTGCTTTGCTTCACTTCTG+TGG | - | tig0021448:7475-7494 | Msa1391770:intron | 45.0% | |
| AGGGAGACCCGAAAAACAAT+AGG | - | tig0021448:7540-7559 | Msa1391770:intron | 45.0% | |
| ! | CTGATCTTCACTGTGTTGAC+TGG | - | tig0021448:8023-8042 | Msa1391770:intron | 45.0% |
| TTGGATCCACGTATGTTAGC+AGG | - | tig0021448:8184-8203 | Msa1391770:CDS | 45.0% | |
| TCCACGTATGTTAGCAGGAT+AGG | - | tig0021448:8189-8208 | Msa1391770:CDS | 45.0% | |
| TCCTATCCTGCTAACATACG+TGG | + | tig0021448:8193-8212 | None:intergenic | 45.0% | |
| GTATGTTAGCAGGATAGGAG+AGG | - | tig0021448:8194-8213 | Msa1391770:CDS | 45.0% | |
| TTAGCATAAGGGAAGTGGGT+GGG | - | tig0021448:8270-8289 | Msa1391770:intron | 45.0% | |
| ! | AAGTGGGTGGGAATTGATTC+TGG | - | tig0021448:8282-8301 | Msa1391770:intron | 45.0% |
| ! | AGGGAGTTTATTAGGGGTGT+AGG | - | tig0021448:8311-8330 | Msa1391770:intron | 45.0% |
| !! | GCCGACCTGAATTGATAATG+TGG | + | tig0021448:8499-8518 | None:intergenic | 45.0% |
| CGTCGCAATCTCACTTCTAA+TGG | - | tig0021448:8544-8563 | Msa1391770:intron | 45.0% | |
| !! | CTTCTGCTTTTGTTGTGGTC+AGG | - | tig0021448:8869-8888 | Msa1391770:intron | 45.0% |
| !! | TGCTTTTGTTGTGGTCAGGT+TGG | - | tig0021448:8873-8892 | Msa1391770:intron | 45.0% |
| TGTTGGAAAAACAACCCTGG+AGG | + | tig0021448:8936-8955 | None:intergenic | 45.0% | |
| GCATGTTGGAAAAACAACCC+TGG | + | tig0021448:8939-8958 | None:intergenic | 45.0% | |
| !!! | GGGTTGTTTTTCCAACATGC+TGG | - | tig0021448:8939-8958 | Msa1391770:CDS | 45.0% |
| TATGGAGTGGTATCATGTGG+TGG | + | tig0021448:9246-9265 | None:intergenic | 45.0% | |
| AGTCGAATGAAAGCAACCTG+AGG | + | tig0021448:9665-9684 | None:intergenic | 45.0% | |
| ACTGGAATGCACATGATCCA+TGG | - | tig0021448:9922-9941 | Msa1391770:intron | 45.0% | |
| GACACACTAACAAGTGTCCA+TGG | + | tig0021448:9942-9961 | None:intergenic | 45.0% | |
| !! | GATTGTGAAAGTACTGGTGG+AGG | - | tig0021448:9966-9985 | Msa1391770:intron | 45.0% |
| !! | TTGTGAAAGTACTGGTGGAG+GGG | - | tig0021448:9968-9987 | Msa1391770:intron | 45.0% |
| CTTGTGCAGTTTCAACAAGC+AGG | + | tig0021448:10078-10097 | None:intergenic | 45.0% | |
| ! | GTTAGTTGGAGCACTCATAG+TGG | - | tig0021448:10455-10474 | Msa1391770:intron | 45.0% |
| !! | TGATTTGCTCTACAGACCAG+AGG | - | tig0021448:10920-10939 | Msa1391770:intron | 45.0% |
| TCATGTGGATCCATTCTCAC+TGG | - | tig0021448:11131-11150 | Msa1391770:CDS | 45.0% | |
| CATGTTCTGTCCAGTGAGAA+TGG | + | tig0021448:11144-11163 | None:intergenic | 45.0% | |
| TCTCACTGGACAGAACATGT+AGG | - | tig0021448:11145-11164 | Msa1391770:CDS | 45.0% | |
| CTCACTGGACAGAACATGTA+GGG | - | tig0021448:11146-11165 | Msa1391770:CDS | 45.0% | |
| AGAACATGTAGGGTGGAGAT+TGG | - | tig0021448:11156-11175 | Msa1391770:CDS | 45.0% | |
| !!! | TAAATCTTAATATTTTTTAA+TGG | + | tig0021448:7571-7590 | None:intergenic | 5.0% |
| !!! | ATATTTTAAAAATTTAATGA+TGG | - | tig0021448:10299-10318 | Msa1391770:intron | 5.0% |
| ATGGAGACACCACCATCAAC+CGG | - | tig0021448:3854-3873 | Msa1391770:three_prime_UTR | 50.0% | |
| GAGAAGGCCAAACGAGGTTA+TGG | + | tig0021448:4098-4117 | None:intergenic | 50.0% | |
| AAGAGAGAGAAGGCCAAACG+AGG | + | tig0021448:4104-4123 | None:intergenic | 50.0% | |
| ! | TTTGGCCTTCTCTCTCTTGC+CGG | - | tig0021448:4106-4125 | Msa1391770:CDS | 50.0% |
| ! | CTTCTCTCTCTTGCCGGTTA+GGG | - | tig0021448:4112-4131 | Msa1391770:CDS | 50.0% |
| ! | GAGGCTTTATCTTTCGGAGC+AGG | - | tig0021448:4722-4741 | Msa1391770:intron | 50.0% |
| AGCTGCTGAGCACATTTCTC+AGG | - | tig0021448:5037-5056 | Msa1391770:intron | 50.0% | |
| GCACCAACACATGTCGTACA+CGG | - | tig0021448:5294-5313 | Msa1391770:intron | 50.0% | |
| CACCAACACATGTCGTACAC+GGG | - | tig0021448:5295-5314 | Msa1391770:intron | 50.0% | |
| ACACCTTCAATCTGGAGGCT+TGG | - | tig0021448:5320-5339 | Msa1391770:intron | 50.0% | |
| CACCTTCAATCTGGAGGCTT+GGG | - | tig0021448:5321-5340 | Msa1391770:intron | 50.0% | |
| ACCTTCAATCTGGAGGCTTG+GGG | - | tig0021448:5322-5341 | Msa1391770:intron | 50.0% | |
| GACTATCATACATCCAGGCG+AGG | - | tig0021448:5439-5458 | Msa1391770:intron | 50.0% | |
| ATCTCCGCCGTAAACAACAC+TGG | + | tig0021448:5535-5554 | None:intergenic | 50.0% | |
| ATTTCCGCCATCGACATGAC+TGG | + | tig0021448:5597-5616 | None:intergenic | 50.0% | |
| CACATGTCAGCCGATATTGC+GGG | + | tig0021448:5627-5646 | None:intergenic | 50.0% | |
| CCACATGTCAGCCGATATTG+CGG | + | tig0021448:5628-5647 | None:intergenic | 50.0% | |
| GGCACCATACTCAGATATGG+CGG | + | tig0021448:5653-5672 | None:intergenic | 50.0% | |
| TAGCTCCAAGGACAGCATGA+CGG | + | tig0021448:6118-6137 | None:intergenic | 50.0% | |
| GACGAGAGTTTGTAGCTCCA+AGG | + | tig0021448:6130-6149 | None:intergenic | 50.0% | |
| AATGGGGTAGAACAGGGCTT+GGG | - | tig0021448:6399-6418 | Msa1391770:intron | 50.0% | |
| CATCCCTATGTGCTTTCTGG+AGG | - | tig0021448:6670-6689 | Msa1391770:intron | 50.0% | |
| ! | CCAACCTCCAGAAAGCACAT+AGG | + | tig0021448:6677-6696 | None:intergenic | 50.0% |
| ! | CCTATGTGCTTTCTGGAGGT+TGG | - | tig0021448:6674-6693 | Msa1391770:intron | 50.0% |
| GCTACAGACTCCAACAAGTC+TGG | - | tig0021448:6864-6883 | Msa1391770:intron | 50.0% | |
| ACAGACTCCAACAAGTCTGG+TGG | - | tig0021448:6867-6886 | Msa1391770:intron | 50.0% | |
| ACTGCTGATAGCCCTACTGT+CGG | - | tig0021448:6903-6922 | Msa1391770:intron | 50.0% | |
| TACCTCTTGGTCCGACAGTA+GGG | + | tig0021448:6917-6936 | None:intergenic | 50.0% | |
| ATACCTCTTGGTCCGACAGT+AGG | + | tig0021448:6918-6937 | None:intergenic | 50.0% | |
| ! | ACGTGGCTTTTTGCCCTTCT+AGG | - | tig0021448:6967-6986 | Msa1391770:intron | 50.0% |
| !! | TGGCTCTAGTCCTGTGGTTA+AGG | - | tig0021448:7392-7411 | Msa1391770:intron | 50.0% |
| CTTAGCATAAGGGAAGTGGG+TGG | - | tig0021448:8269-8288 | Msa1391770:intron | 50.0% | |
| CCAGAAGACGTGGAAAAGCA+TGG | + | tig0021448:8642-8661 | None:intergenic | 50.0% | |
| ! | CCATGCTTTTCCACGTCTTC+TGG | - | tig0021448:8639-8658 | Msa1391770:intron | 50.0% |
| CGTACCTATGACCAGCATGT+TGG | + | tig0021448:8953-8972 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGACAGT+AGG | + | tig0021448:8978-8997 | None:intergenic | 50.0% | |
| !! | TGTGAAAGTACTGGTGGAGG+GGG | - | tig0021448:9969-9988 | Msa1391770:intron | 50.0% |
| ! | CAGCTTTAGTGCTTGAACCG+AGG | - | tig0021448:10482-10501 | Msa1391770:intron | 50.0% |
| ! | CAGACCAGAGGATGAGGTTT+TGG | - | tig0021448:10932-10951 | Msa1391770:intron | 50.0% |
| TCTGCCAAAACCTCATCCTC+TGG | + | tig0021448:10939-10958 | None:intergenic | 50.0% | |
| ACTGGACAGAACATGTAGGG+TGG | - | tig0021448:11149-11168 | Msa1391770:CDS | 50.0% | |
| !! | TTCTTCACTGCGCCGGTTGA+TGG | + | tig0021448:3869-3888 | None:intergenic | 55.0% |
| AACCGGCGCAGTGAAGAAGA+AGG | - | tig0021448:3871-3890 | Msa1391770:three_prime_UTR | 55.0% | |
| CTCCTTCTTCTTCACTGCGC+CGG | + | tig0021448:3876-3895 | None:intergenic | 55.0% | |
| CCTAACCGGCAAGAGAGAGA+AGG | + | tig0021448:4114-4133 | None:intergenic | 55.0% | |
| ! | CCTTCTCTCTCTTGCCGGTT+AGG | - | tig0021448:4111-4130 | Msa1391770:CDS | 55.0% |
| ACACACGTCACCAACACGTG+AGG | + | tig0021448:5218-5237 | None:intergenic | 55.0% | |
| !! | CACGTGTTGGTGACGTGTGT+TGG | - | tig0021448:5218-5237 | Msa1391770:intron | 55.0% |
| ! | TGCACCTCACGTGTTGGTGT+TGG | - | tig0021448:5271-5290 | Msa1391770:intron | 55.0% |
| ! | GCACCTCACGTGTTGGTGTT+GGG | - | tig0021448:5272-5291 | Msa1391770:intron | 55.0% |
| GTCCCGTGTACGACATGTGT+TGG | + | tig0021448:5300-5319 | None:intergenic | 55.0% | |
| CACGGGACACACCTTCAATC+TGG | - | tig0021448:5312-5331 | Msa1391770:intron | 55.0% | |
| GGGACACACCTTCAATCTGG+AGG | - | tig0021448:5315-5334 | Msa1391770:intron | 55.0% | |
| ACCCCAAGCCTCCAGATTGA+AGG | + | tig0021448:5326-5345 | None:intergenic | 55.0% | |
| ! | CCGCAATATCGGCTGACATG+TGG | - | tig0021448:5625-5644 | Msa1391770:intron | 55.0% |
| GCGCCACCATGTCCGATATT+TGG | - | tig0021448:5712-5731 | Msa1391770:intron | 55.0% | |
| ATCAGGGCTGTCTGTGTGAG+TGG | + | tig0021448:5964-5983 | None:intergenic | 55.0% | |
| CCAAGGACAGCATGACGGTT+AGG | + | tig0021448:6113-6132 | None:intergenic | 55.0% | |
| CCTAACCGTCATGCTGTCCT+TGG | - | tig0021448:6110-6129 | Msa1391770:intron | 55.0% | |
| CAATGGGGTAGAACAGGGCT+TGG | - | tig0021448:6398-6417 | Msa1391770:intron | 55.0% | |
| ATGGGGTAGAACAGGGCTTG+GGG | - | tig0021448:6400-6419 | Msa1391770:intron | 55.0% | |
| ACAGAACTCCTGCGCACTTC+AGG | + | tig0021448:7328-7347 | None:intergenic | 55.0% | |
| GCGCAGGAGTTCTGTAGTGT+TGG | - | tig0021448:7333-7352 | Msa1391770:intron | 55.0% | |
| !! | ACGTGTTGGCTCTAGTCCTG+TGG | - | tig0021448:7386-7405 | Msa1391770:intron | 55.0% |
| GGCTGCTGTCCTTTGTGTTC+AGG | - | tig0021448:8603-8622 | Msa1391770:intron | 55.0% | |
| GGCAAGAAGATAGAGCGAGC+TGG | - | tig0021448:8894-8913 | Msa1391770:intron | 55.0% | |
| TCATGGCACCAAGCACTTCC+TGG | - | tig0021448:10419-10438 | Msa1391770:intron | 55.0% | |
| GCTCTACAGACCAGAGGATG+AGG | - | tig0021448:10926-10945 | Msa1391770:intron | 55.0% | |
| !! | GGATGAGGTTTTGGCAGAGC+TGG | - | tig0021448:10941-10960 | Msa1391770:intron | 55.0% |
| !! | TTCACTGCGCCGGTTGATGG+TGG | + | tig0021448:3866-3885 | None:intergenic | 60.0% |
| GTGGGGTCCTCAGCTTGAAC+AGG | - | tig0021448:4680-4699 | Msa1391770:intron | 60.0% | |
| ! | CACGTGTTGGTGTGCCACGT+TGG | - | tig0021448:5248-5267 | Msa1391770:intron | 60.0% |
| ACACGTGAGGTGCACCAACG+TGG | + | tig0021448:5265-5284 | None:intergenic | 60.0% | |
| CGTTGGTGCACCTCACGTGT+TGG | - | tig0021448:5265-5284 | Msa1391770:intron | 60.0% | |
| GTGCCCAACACCAACACGTG+AGG | + | tig0021448:5278-5297 | None:intergenic | 60.0% | |
| CAGCCGATATTGCGGGCGTT+TGG | + | tig0021448:5620-5639 | None:intergenic | 60.0% | |
| GGCGCCGCCATATCTGAGTA+TGG | - | tig0021448:5646-5665 | Msa1391770:intron | 60.0% | |
| ! | CGTAAAGGATGGCGGTGCCA+TGG | + | tig0021448:5674-5693 | None:intergenic | 60.0% |
| TGGGGTAGAACAGGGCTTGG+GGG | - | tig0021448:6401-6420 | Msa1391770:intron | 60.0% | |
| AGCCCTACTGTCGGACCAAG+AGG | - | tig0021448:6912-6931 | Msa1391770:intron | 60.0% | |
| TGGTGGAGGGGGAACATTGC+AGG | - | tig0021448:9980-9999 | Msa1391770:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021448 | gene | 3780 | 11303 | 3780 | ID=Msa1391770;Name=Msa1391770 |
| tig0021448 | mRNA | 3780 | 11303 | 3780 | ID=Msa1391770-mRNA-1;Parent=Msa1391770;Name=Msa1391770-mRNA-1;_AED=0.13;_eAED=0.13;_QI=74|0.71|0.8|0.93|0.85|0.86|15|290|476 |
| tig0021448 | exon | 3780 | 4177 | 3780 | ID=Msa1391770-mRNA-1:exon:12901;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 5082 | 5181 | 5082 | ID=Msa1391770-mRNA-1:exon:12900;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 6116 | 6192 | 6116 | ID=Msa1391770-mRNA-1:exon:12899;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 6289 | 6363 | 6289 | ID=Msa1391770-mRNA-1:exon:12898;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 6459 | 6570 | 6459 | ID=Msa1391770-mRNA-1:exon:12897;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 7006 | 7079 | 7006 | ID=Msa1391770-mRNA-1:exon:12896;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 7670 | 7751 | 7670 | ID=Msa1391770-mRNA-1:exon:12895;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 8095 | 8271 | 8095 | ID=Msa1391770-mRNA-1:exon:12894;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 8388 | 8467 | 8388 | ID=Msa1391770-mRNA-1:exon:12893;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 8926 | 9000 | 8926 | ID=Msa1391770-mRNA-1:exon:12892;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 9100 | 9165 | 9100 | ID=Msa1391770-mRNA-1:exon:12891;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 10067 | 10111 | 10067 | ID=Msa1391770-mRNA-1:exon:12890;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 10340 | 10403 | 10340 | ID=Msa1391770-mRNA-1:exon:12889;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 10850 | 10871 | 10850 | ID=Msa1391770-mRNA-1:exon:12888;Parent=Msa1391770-mRNA-1 |
| tig0021448 | exon | 10956 | 11303 | 10956 | ID=Msa1391770-mRNA-1:exon:12887;Parent=Msa1391770-mRNA-1 |
| tig0021448 | five_prime_UTR | 11230 | 11303 | 11230 | ID=Msa1391770-mRNA-1:five_prime_utr;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 10956 | 11229 | 10956 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 10850 | 10871 | 10850 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 10340 | 10403 | 10340 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 10067 | 10111 | 10067 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 9100 | 9165 | 9100 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 8926 | 9000 | 8926 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 8388 | 8467 | 8388 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 8095 | 8271 | 8095 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 7670 | 7751 | 7670 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 7006 | 7079 | 7006 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 6459 | 6570 | 6459 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 6289 | 6363 | 6289 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 6116 | 6192 | 6116 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 5082 | 5181 | 5082 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | CDS | 4070 | 4177 | 4070 | ID=Msa1391770-mRNA-1:cds;Parent=Msa1391770-mRNA-1 |
| tig0021448 | three_prime_UTR | 3780 | 4069 | 3780 | ID=Msa1391770-mRNA-1:three_prime_utr;Parent=Msa1391770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
