AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215320 MtrunA17_Chr4g0064681 97.093 344 10 0 1 344 1 344 0.0 699
Msa1215320 MtrunA17_Chr4g0064671 99.602 251 1 0 420 670 9 259 0.0 526
Msa1215320 MtrunA17_Chr1g0149991 63.347 251 74 4 418 665 298 533 1.70e-100 318
Msa1215320 MtrunA17_Chr1g0149991 39.429 350 135 11 10 344 11 298 6.26e-65 224
Msa1215320 MtrunA17_Chr3g0123951 25.673 483 203 15 191 654 15 360 2.19e-29 120
Msa1215320 MtrunA17_Chr4g0074041 33.193 238 102 9 423 656 211 395 2.70e-27 118
Msa1215320 MtrunA17_Chr6g0458441 30.290 241 112 7 423 661 244 430 6.81e-27 116
Msa1215320 MtrunA17_Chr8g0382161 25.311 482 204 16 192 654 16 360 4.74e-26 110
Msa1215320 MtrunA17_Chr6g0458421 29.536 237 111 6 423 657 146 328 1.73e-25 111
Msa1215320 MtrunA17_Chr5g0411271 27.848 237 119 7 423 657 264 450 4.35e-25 110
Msa1215320 MtrunA17_Chr3g0133061 29.268 246 118 6 415 656 695 888 2.57e-24 108
Msa1215320 MtrunA17_Chr6g0458431 29.114 237 112 6 423 657 211 393 3.54e-24 107
Msa1215320 MtrunA17_Chr8g0366721 27.823 248 127 6 412 657 302 499 4.23e-24 107
Msa1215320 MtrunA17_Chr5g0427301 28.205 234 111 7 427 656 665 845 1.30e-20 97.1
Msa1215320 MtrunA17_Chr1g0150541 27.119 236 116 7 423 654 301 484 5.94e-19 91.7
Msa1215320 MtrunA17_Chr7g0255591 28.144 167 95 4 491 654 754 898 6.47e-19 91.7
Msa1215320 MtrunA17_Chr5g0412381 26.068 234 117 5 427 656 545 726 8.14e-19 91.3
Msa1215320 MtrunA17_Chr1g0189101 31.737 167 88 5 491 654 765 908 2.49e-18 89.7
Msa1215320 MtrunA17_Chr1g0189101 33.333 147 70 3 195 341 318 436 2.38e-14 77.0
Msa1215320 MtrunA17_Chr2g0312901 26.496 234 118 5 423 654 145 326 2.66e-18 89.4
Msa1215320 MtrunA17_Chr8g0365831 28.333 240 113 10 426 657 277 465 7.43e-16 80.9
Msa1215320 MtrunA17_Chr2g0313171 25.207 242 123 7 420 656 581 769 8.85e-16 81.6
Msa1215320 MtrunA17_Chr2g0322211 26.506 166 97 4 491 654 717 859 9.94e-16 81.3
Msa1215320 MtrunA17_Chr2g0322211 30.719 153 77 4 195 346 269 393 1.69e-11 67.8
Msa1215320 MtrunA17_Chr1g0170261 27.111 225 108 7 425 642 309 484 5.91e-15 79.0
Msa1215320 MtrunA17_Chr7g0267641 26.667 180 108 5 491 668 791 948 2.12e-14 77.0
Msa1215320 MtrunA17_Chr7g0267641 31.973 147 72 3 195 341 334 452 5.55e-13 72.4
Msa1215320 MtrunA17_Chr4g0062561 30.464 151 77 5 509 657 729 853 2.06e-13 73.9
Msa1215320 MtrunA17_Chr5g0439971 25.561 223 110 7 425 640 312 485 1.50e-12 71.2
Msa1215320 MtrunA17_Chr4g0062491 26.190 168 96 5 496 657 149 294 3.09e-12 68.2
Msa1215320 MtrunA17_Chr3g0119031 25.561 223 110 7 425 640 307 480 9.83e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215320 AT5G10790.2 56.327 245 99 3 422 663 169 408 1.44e-78 257
Msa1215320 AT5G10790.2 55.556 144 36 2 192 335 43 158 8.68e-44 163
Msa1215320 AT5G10790.1 56.327 245 99 3 422 663 298 537 8.46e-77 256
Msa1215320 AT5G10790.1 41.642 341 139 11 1 335 1 287 5.30e-71 241
Msa1215320 AT4G39910.1 24.845 483 209 17 192 654 16 364 3.32e-29 120
Msa1215320 AT5G57990.1 32.068 237 105 8 423 656 226 409 6.17e-27 117
Msa1215320 AT4G17895.1 28.390 236 116 6 424 657 292 476 6.74e-24 107
Msa1215320 AT2G22310.1 24.516 465 206 13 192 649 16 342 2.10e-23 102
Msa1215320 AT4G24560.1 26.792 265 136 5 398 656 634 846 8.27e-23 104
Msa1215320 AT5G46740.1 29.675 246 119 8 415 657 275 469 1.40e-21 100
Msa1215320 AT5G46740.2 29.675 246 119 8 415 657 66 260 1.60e-21 99.4
Msa1215320 AT2G22310.3 26.693 251 132 4 400 649 111 310 3.95e-21 95.5
Msa1215320 AT2G22310.2 26.693 251 132 4 400 649 106 305 3.99e-21 95.5
Msa1215320 AT2G40930.1 27.488 211 126 6 452 657 728 916 2.31e-20 96.7
Msa1215320 AT2G40930.1 31.034 145 72 3 195 339 315 431 3.61e-12 70.5
Msa1215320 AT2G40930.2 27.488 211 126 6 452 657 728 916 2.31e-20 96.7
Msa1215320 AT2G40930.2 31.034 145 72 3 195 339 315 431 3.61e-12 70.5
Msa1215320 AT4G10590.4 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215320 AT4G10590.4 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215320 AT4G10590.3 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215320 AT4G10590.3 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215320 AT4G10590.1 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215320 AT4G10590.1 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215320 AT4G10590.2 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215320 AT4G10590.2 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215320 AT4G10570.1 32.934 167 86 4 491 654 749 892 6.48e-19 92.0
Msa1215320 AT4G10570.1 34.694 147 68 4 195 341 302 420 7.06e-14 75.9
Msa1215320 AT4G31670.1 24.576 236 122 6 423 654 288 471 1.24e-18 90.5
Msa1215320 AT5G65450.1 26.538 260 136 6 401 656 424 632 2.91e-18 89.7
Msa1215320 AT5G65450.2 26.538 260 136 6 401 656 443 651 2.93e-18 89.7
Msa1215320 AT2G24640.2 26.724 232 114 7 427 654 128 307 3.64e-18 88.6
Msa1215320 AT2G24640.1 26.271 236 118 7 423 654 294 477 6.92e-18 88.2
Msa1215320 AT5G22030.1 27.711 166 96 4 491 654 723 866 1.31e-17 87.8
Msa1215320 AT3G14400.1 26.068 234 119 5 423 654 151 332 1.62e-17 87.0
Msa1215320 AT5G22030.2 27.711 166 96 4 491 654 765 908 1.66e-17 87.4
Msa1215320 AT1G17110.3 25.207 242 123 7 420 656 555 743 1.79e-17 87.4
Msa1215320 AT1G17110.1 25.207 242 123 7 420 656 555 743 1.79e-17 87.4
Msa1215320 AT1G17110.2 25.207 242 123 7 420 656 559 747 1.94e-17 87.4
Msa1215320 AT1G32850.1 30.508 177 96 5 481 654 725 877 1.53e-15 81.3
Msa1215320 AT1G32850.1 32.886 149 72 3 194 342 298 418 5.74e-14 76.3
Msa1215320 AT5G06600.2 25.541 231 114 8 425 648 306 485 1.42e-11 68.6
Msa1215320 AT5G06600.1 25.541 231 114 8 425 648 307 486 1.45e-11 68.6
Msa1215320 AT3G11910.3 25.110 227 120 8 425 648 306 485 1.53e-11 68.6
Msa1215320 AT3G11910.1 25.110 227 120 8 425 648 306 485 1.53e-11 68.6
Msa1215320 AT3G11910.4 25.110 227 120 8 425 648 305 484 1.54e-11 68.6
Msa1215320 AT3G11910.2 25.110 227 120 8 425 648 305 484 1.54e-11 68.6
Msa1215320 AT5G06600.3 25.541 231 114 8 425 648 307 486 1.78e-11 68.2

Find 226 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTAGGCACTCCAACTTTC+TGG 0.152570 8_1:-76558349 Msa1215320:three_prime_UTR
AACAAACAGGGTCCTAATTA+TGG 0.209770 8_1:+76559830 None:intergenic
TGGGCTTCTGATTGAGATTA+AGG 0.213980 8_1:+76559850 None:intergenic
TGAAATCTGACCGTTGATTT+TGG 0.232505 8_1:+76562549 None:intergenic
AACACATTCTGAACTGATTC+TGG 0.251190 8_1:+76559807 None:intergenic
GCGGAGGGAGGCGCGGCCGC+CGG 0.262389 8_1:+76562438 None:intergenic
ATTTACAAGAGCAGAGAAAT+TGG 0.276376 8_1:-76559088 Msa1215320:CDS
CGGAGGGAGGCGCGGCCGCC+GGG 0.289815 8_1:+76562439 None:intergenic
TTTCATGAATTCGGTGTTGC+AGG 0.290893 8_1:-76561939 Msa1215320:CDS
GACATTAAATGCCAATGATT+TGG 0.291008 8_1:+76558551 None:intergenic
AAGTTAGGTTTCAAGGTCTT+TGG 0.300636 8_1:+76562623 None:intergenic
ACTCCTGCATAGAGGGAGTA+TGG 0.307132 8_1:-76559775 Msa1215320:CDS
CAAGAACTTTGCTGGGCTAT+AGG 0.310468 8_1:+76561691 None:intergenic
TCAATCAGAAGCCCATAATT+AGG 0.315067 8_1:-76559842 Msa1215320:CDS
AATCAGTTCAGAATGTGTTT+TGG 0.329675 8_1:-76559803 Msa1215320:CDS
AAACACTTGTTTCATGAATT+CGG 0.335765 8_1:-76561948 Msa1215320:CDS
GCGATTGTTGTATTGCTCAT+AGG 0.342061 8_1:-76559326 Msa1215320:CDS
CTTTGGGATATCTACCTTGA+TGG 0.355939 8_1:-76559124 Msa1215320:CDS
GAAATGCAGGGCGAGGGTTT+AGG 0.356585 8_1:-76560315 Msa1215320:intron
CTGCTGCGTTTGCCGTGATC+AGG 0.363132 8_1:-76562221 Msa1215320:CDS
CTTTGATGCTTTGAAAATCA+AGG 0.366229 8_1:-76558244 Msa1215320:three_prime_UTR
CTATAAAGCAACTGATAAAT+CGG 0.367733 8_1:-76558602 Msa1215320:CDS
ATTATGCTTAGCTTGTGATA+TGG 0.369132 8_1:-76561753 Msa1215320:CDS
CACCTGTACAAGAACTTTGC+TGG 0.372135 8_1:+76561683 None:intergenic
ATCTCTCATCCTCAATCTTA+AGG 0.377114 8_1:-76558876 Msa1215320:CDS
AACAAGGGGAAGCTTCCTTA+TGG 0.382446 8_1:+76559002 None:intergenic
TTTACAAGAGCAGAGAAATT+GGG 0.384632 8_1:-76559087 Msa1215320:CDS
GGTACAAGTGTGATGATTCT+TGG 0.387459 8_1:-76558699 Msa1215320:CDS
GTTTGATCCGGAGGCAGTTA+TGG 0.388383 8_1:+76562464 None:intergenic
AGGTAGATATCCCAAAGTTT+TGG 0.392594 8_1:+76559130 None:intergenic
ATAGCTTGCAAGGTTGGACT+TGG 0.397326 8_1:+76561397 None:intergenic
CCGATTCCAGCCAAAACTTT+GGG 0.398387 8_1:-76559140 Msa1215320:CDS
AAACATTGTGAGGGCTGCTC+AGG 0.399967 8_1:-76558659 Msa1215320:CDS
ATCTACCTTGATGGGGTGCT+TGG 0.401605 8_1:-76559115 Msa1215320:CDS
CAAAGATCATTTGAAGCATC+AGG 0.408559 8_1:+76558811 None:intergenic
GCCGATTCCAGCCAAAACTT+TGG 0.412364 8_1:-76559141 Msa1215320:CDS
GGTCTCTTGCTTGTTGCCCT+AGG 0.414334 8_1:-76560294 Msa1215320:CDS
AATGGATGGATAGTAAAGTT+AGG 0.415740 8_1:+76562608 None:intergenic
ATGGAGCGAAAGGGGTGGGA+TGG 0.416218 8_1:-76562777 Msa1215320:five_prime_UTR
AAGAACTTTGCTGGGCTATA+GGG 0.417867 8_1:+76561692 None:intergenic
AGAAGTCATGGCATATCGTT+AGG 0.424302 8_1:+76558507 None:intergenic
TATGGATTCCTTATAATTTG+TGG 0.426265 8_1:-76558315 Msa1215320:three_prime_UTR
GCGGTCAGATGTTATGTGTA+TGG 0.427526 8_1:-76559286 Msa1215320:CDS
CCCTCAAGTTTCCAGAAAGT+TGG 0.428158 8_1:+76558338 None:intergenic
TTTCTGGAAACTTGAGGGTA+TGG 0.431385 8_1:-76558333 Msa1215320:three_prime_UTR
GATAGTAAAGTTAGGTTTCA+AGG 0.439060 8_1:+76562616 None:intergenic
TCCTGAGTGATAAGCATAAT+CGG 0.439582 8_1:-76561883 Msa1215320:CDS
CGCCGCTTTCTGAGATTCTC+CGG 0.444030 8_1:+76562091 None:intergenic
ACAAACAGGGTCCTAATTAT+GGG 0.446938 8_1:+76559831 None:intergenic
GCGAAAGGGGTGGGATGGGA+TGG 0.449141 8_1:-76562772 Msa1215320:five_prime_UTR
ATAGCAACTGCGAAAAGAAA+TGG 0.452606 8_1:-76561803 Msa1215320:CDS
CCTTGCAAGCTATGAACAAC+AGG 0.455682 8_1:-76561387 Msa1215320:CDS
CTCTCAAGCAGATGTCCATA+AGG 0.460815 8_1:-76559017 Msa1215320:CDS
TGGAGCGAAAGGGGTGGGAT+GGG 0.461953 8_1:-76562776 Msa1215320:five_prime_UTR
AGATTCAGAGTGGGAGGGAA+TGG 0.462664 8_1:+76562665 None:intergenic
CAGGTGATGGTCCAAATCAT+TGG 0.464643 8_1:-76558562 Msa1215320:three_prime_UTR
GAACTGATTCTGGAACAAAC+AGG 0.466432 8_1:+76559817 None:intergenic
TTGTTCATAGCTTGCAAGGT+TGG 0.469502 8_1:+76561391 None:intergenic
GCCAAGTGGGGACATGGTTG+TGG 0.470459 8_1:+76562526 None:intergenic
TCTGATCAATGTCAACTCCT+AGG 0.472459 8_1:+76560277 None:intergenic
TGCTATCTCGATGGTGTTAG+CGG 0.473047 8_1:-76560225 Msa1215320:CDS
AATATAAATACAAATAAAGT+AGG 0.473412 8_1:+76558187 None:intergenic
ATGGAGGGAGAGGAATGGTT+TGG 0.473439 8_1:+76562483 None:intergenic
ATCATTGGCATTTAATGTCA+TGG 0.475216 8_1:-76558547 Msa1215320:three_prime_UTR
TATGTCATCTACTCCGCATC+CGG 0.477988 8_1:-76562110 Msa1215320:CDS
CGATTGTTGTATTGCTCATA+GGG 0.478514 8_1:-76559325 Msa1215320:CDS
GGTGACATGTCCAGTGAGAA+TGG 0.480165 8_1:+76558901 None:intergenic
CAGACCGTTGCGTCCACAAT+CGG 0.485001 8_1:-76562160 Msa1215320:CDS
TTTGGGATATCTACCTTGAT+GGG 0.487341 8_1:-76559123 Msa1215320:CDS
CCAACTTTCTGGAAACTTGA+GGG 0.489263 8_1:-76558338 Msa1215320:three_prime_UTR
GGGCTGCGCTTCACTCAATA+TGG 0.489978 8_1:+76562715 None:intergenic
CTTGACTTGGAACCAAATCA+AGG 0.491810 8_1:-76559216 Msa1215320:CDS
TACAGCGGCGCATGAGATGC+AGG 0.492370 8_1:+76562351 None:intergenic
CGTAGACATCTCACTTGACT+TGG 0.493660 8_1:-76559229 Msa1215320:CDS
TCAATCTTAAGGAGTCGGTT+TGG 0.493910 8_1:-76558865 Msa1215320:CDS
GATCACGGCGGAGGGAGGCG+CGG 0.494606 8_1:+76562431 None:intergenic
TTCAGAGTGGGAGGGAATGG+AGG 0.494827 8_1:+76562668 None:intergenic
TTTGCAGTTCCCATTCTCAC+TGG 0.494834 8_1:-76558911 Msa1215320:CDS
GGCAGAATCATCACCATTTG+CGG 0.495711 8_1:+76561826 None:intergenic
AAAGCATCAAAGAGGGGAGG+AGG 0.498976 8_1:+76558255 None:intergenic
GAGAGTTAATACTTTCATGT+TGG 0.499971 8_1:-76558395 Msa1215320:three_prime_UTR
AGGAAAATAGAAGTGTTGAT+TGG 0.500199 8_1:+76557956 None:intergenic
CTCATGATTGGCACAGGTGA+TGG 0.503720 8_1:-76558575 Msa1215320:exon
AGAGCGCGTTCGCGTAGATC+CGG 0.505738 8_1:+76562043 None:intergenic
TAAATCGGTTGCCTCATGAT+TGG 0.507887 8_1:-76558587 Msa1215320:exon
CTCACCATTGCAAGAAGGAT+TGG 0.509379 8_1:+76559164 None:intergenic
GAGGGAGAGGAATGGTTTGG+TGG 0.509621 8_1:+76562486 None:intergenic
TTTCGTGAGGATCACGGCGG+AGG 0.510267 8_1:+76562422 None:intergenic
GGATGGAAGAGAGTAAAAGT+AGG 0.512354 8_1:-76562755 Msa1215320:five_prime_UTR
AACTCGGCCAAGTGGGGACA+TGG 0.512760 8_1:+76562520 None:intergenic
CACTCTGGTAAGTTAGATGC+TGG 0.512954 8_1:-76558757 Msa1215320:CDS
TCAGGCTCATCCCCATCAAA+AGG 0.513022 8_1:+76558829 None:intergenic
CCTGTTGTTCATAGCTTGCA+AGG 0.514285 8_1:+76561387 None:intergenic
CGGTGATTTGATAATGTGAA+TGG 0.515858 8_1:+76562581 None:intergenic
GTACAAGTGTGATGATTCTT+GGG 0.516165 8_1:-76558698 Msa1215320:CDS
ACCACAACCATGTCCCCACT+TGG 0.519117 8_1:-76562527 Msa1215320:CDS
ATTGCTCATAGGGTATTCTC+TGG 0.521986 8_1:-76559315 Msa1215320:CDS
CAGTTATGGAGGGAGAGGAA+TGG 0.523524 8_1:+76562478 None:intergenic
TCTCCCTCCATAACTGCCTC+CGG 0.524014 8_1:-76562471 Msa1215320:CDS
TTTCTGAGATTCTCCGGATG+CGG 0.524348 8_1:+76562097 None:intergenic
GCCCAGCAAAGTTCTTGTAC+AGG 0.529287 8_1:-76561685 Msa1215320:intron
TACCCATACTCCCTCTATGC+AGG 0.531084 8_1:+76559772 None:intergenic
GTGACATGTCCAGTGAGAAT+GGG 0.531399 8_1:+76558902 None:intergenic
TCAGCAGTGTAAGGTGAAGC+AGG 0.532735 8_1:-76559043 Msa1215320:CDS
GGTGGAAGAGCGGCGGAACT+CGG 0.533556 8_1:+76562504 None:intergenic
TCGCGTAGATCCGGAGTTGA+AGG 0.536635 8_1:+76562052 None:intergenic
AGGGAGGCGCGGCCGCCGGG+AGG 0.538738 8_1:+76562442 None:intergenic
TTTGCTGTCGTCACTCACTC+TGG 0.539742 8_1:-76558772 Msa1215320:CDS
AACATTGAAATGCAGGGCGA+GGG 0.539768 8_1:-76560321 Msa1215320:intron
CATCCTCAATCTTAAGGAGT+CGG 0.541711 8_1:-76558870 Msa1215320:CDS
GCTTCCAATCCTTCTTGCAA+TGG 0.542195 8_1:-76559168 Msa1215320:CDS
CAACGTTCCTGATTTCCCGC+GGG 0.545113 8_1:-76561996 Msa1215320:CDS
CTACGCGAACGCGCTCTGAT+CGG 0.545145 8_1:-76562037 Msa1215320:CDS
GGACTGCACTCCTGCATAGA+GGG 0.546844 8_1:-76559782 Msa1215320:CDS
CGACGTAAGCCACACAATGA+AGG 0.547420 8_1:-76561305 Msa1215320:CDS
GCGGCGGAACTCGGCCAAGT+GGG 0.547829 8_1:+76562513 None:intergenic
ACCTGTACAAGAACTTTGCT+GGG 0.547919 8_1:+76561684 None:intergenic
AGGTTTCAAGGTCTTTGGAT+CGG 0.548701 8_1:+76562628 None:intergenic
CGCATGAGATGCAGGCATAG+AGG 0.550847 8_1:+76562359 None:intergenic
AAGCATCAAAGAGGGGAGGA+GGG 0.551004 8_1:+76558256 None:intergenic
AGCATCAAAGAGGGGAGGAG+GGG 0.551266 8_1:+76558257 None:intergenic
TCATGTCACTCTTCCACCGC+CGG 0.554123 8_1:-76562328 Msa1215320:CDS
GGGAAATCAGGAACGTTGAT+CGG 0.554225 8_1:+76562001 None:intergenic
AATACATTACCTTCATTGTG+TGG 0.554718 8_1:+76561296 None:intergenic
GGAAGGAGCAGAGAGACCGC+AGG 0.555638 8_1:+76562384 None:intergenic
GGATTACCGTCCTTCAACTC+CGG 0.556868 8_1:-76562062 Msa1215320:CDS
TCCAACTTTCTGGAAACTTG+AGG 0.558593 8_1:-76558339 Msa1215320:three_prime_UTR
AAACCGACTCCTTAAGATTG+AGG 0.558602 8_1:+76558867 None:intergenic
TGGACTGCACTCCTGCATAG+AGG 0.559071 8_1:-76559783 Msa1215320:CDS
AATGCTGATGATGCCGCAAA+TGG 0.559230 8_1:-76561839 Msa1215320:CDS
CAATCCTTCTTGCAATGGTG+AGG 0.559381 8_1:-76559163 Msa1215320:CDS
AAATATGGAGCGAAAGGGGT+GGG 0.560154 8_1:-76562781 Msa1215320:five_prime_UTR
CTGATCAATGTCAACTCCTA+GGG 0.561003 8_1:+76560278 None:intergenic
CTCCTGCATAGAGGGAGTAT+GGG 0.561694 8_1:-76559774 Msa1215320:intron
AGAATGGGAACTGCAAATAA+CGG 0.566367 8_1:+76558917 None:intergenic
CAACTAATATCAAGATTCGA+GGG 0.566733 8_1:+76558284 None:intergenic
ATGAGATGCAGGCATAGAGG+CGG 0.566788 8_1:+76562362 None:intergenic
GTGAGGATCACGGCGGAGGG+AGG 0.567687 8_1:+76562426 None:intergenic
CATTGATGCGGCATGTGCGG+CGG 0.567934 8_1:+76562291 None:intergenic
ACAACTAATATCAAGATTCG+AGG 0.568342 8_1:+76558283 None:intergenic
GGATGCGGAGTAGATGACAT+AGG 0.568578 8_1:+76562112 None:intergenic
CGGCTGAGATTCAGAGTGGG+AGG 0.569818 8_1:+76562659 None:intergenic
ATGTGAATGGATCGAATGGA+TGG 0.571689 8_1:+76562594 None:intergenic
TGAGATGCAGGCATAGAGGC+GGG 0.572369 8_1:+76562363 None:intergenic
ACCGATTATGCTTATCACTC+AGG 0.573589 8_1:+76561882 None:intergenic
ATCTGCGATTAAGCAATCAA+TGG 0.573921 8_1:-76558720 Msa1215320:CDS
TTATATGGAAGCAAGAAACA+AGG 0.575945 8_1:+76558986 None:intergenic
GGAGGCAGTTATGGAGGGAG+AGG 0.576687 8_1:+76562473 None:intergenic
TGATCCGGAGGCAGTTATGG+AGG 0.576751 8_1:+76562467 None:intergenic
TTCGTGAGGATCACGGCGGA+GGG 0.577779 8_1:+76562423 None:intergenic
GTGAGAAATGACACCGGCGG+TGG 0.578310 8_1:+76562315 None:intergenic
GGTTGCCTCATGATTGGCAC+AGG 0.580009 8_1:-76558581 Msa1215320:exon
AAGATTGAGGATGAGAGATA+AGG 0.583138 8_1:+76558880 None:intergenic
TTACAAGAGCAGAGAAATTG+GGG 0.584043 8_1:-76559086 Msa1215320:CDS
TCAAGTGAGATGTCTACGCA+TGG 0.585086 8_1:+76559234 None:intergenic
AGACATTGATGCGGCATGTG+CGG 0.585359 8_1:+76562288 None:intergenic
TCAACGTTCCTGATTTCCCG+CGG 0.585556 8_1:-76561997 Msa1215320:CDS
TCTATCCAAGCACCCCATCA+AGG 0.586315 8_1:+76559110 None:intergenic
GATGCGGAGTAGATGACATA+GGG 0.587068 8_1:+76562113 None:intergenic
GCAAACGCAGCAGAAAAGCT+CGG 0.588350 8_1:+76562231 None:intergenic
AAAATATGGAGCGAAAGGGG+TGG 0.593233 8_1:-76562782 Msa1215320:five_prime_UTR
CATGCCGCATCAATGTCTCC+TGG 0.594546 8_1:-76562283 Msa1215320:CDS
AACATTGTGAGGGCTGCTCA+GGG 0.594864 8_1:-76558658 Msa1215320:CDS
GATCCGGAGGCAGTTATGGA+GGG 0.595001 8_1:+76562468 None:intergenic
TATATGGAAGCAAGAAACAA+GGG 0.595854 8_1:+76558987 None:intergenic
TTGACTTGGAACCAAATCAA+GGG 0.596094 8_1:-76559215 Msa1215320:CDS
TCGATTGCGATCTGATGACC+AGG 0.596802 8_1:+76562265 None:intergenic
GCTTGATGGGATCCATGAAA+AGG 0.596972 8_1:-76561339 Msa1215320:CDS
GAAGTCATGGCATATCGTTA+GGG 0.598867 8_1:+76558508 None:intergenic
AACTGATTCTGGAACAAACA+GGG 0.601896 8_1:+76559818 None:intergenic
ATGCAGGCATAGAGGCGGGA+AGG 0.603348 8_1:+76562367 None:intergenic
AAAAGAAATGGAGAGAACAA+TGG 0.604176 8_1:-76561791 Msa1215320:CDS
GAGGAATTTCGTGAGGATCA+CGG 0.607762 8_1:+76562416 None:intergenic
GATTGAGATTAAGGAGGACA+AGG 0.608404 8_1:+76559859 None:intergenic
TCTTTGGATCGGAGAATCAA+CGG 0.609825 8_1:+76562639 None:intergenic
AGCGGCGGAACTCGGCCAAG+TGG 0.611618 8_1:+76562512 None:intergenic
CATTTCAATCATCTAGAGGA+AGG 0.612225 8_1:+76557936 None:intergenic
GATAATGTGAATGGATCGAA+TGG 0.615478 8_1:+76562590 None:intergenic
ATCCGGAGAATCTCAGAAAG+CGG 0.616124 8_1:-76562093 Msa1215320:CDS
TTCAAAGCATCAAAGAGGGG+AGG 0.619344 8_1:+76558252 None:intergenic
GTTGCGTCCACAATCGGCGA+CGG 0.621132 8_1:-76562154 Msa1215320:CDS
TGACTTGGAACCAAATCAAG+GGG 0.622070 8_1:-76559214 Msa1215320:CDS
AGTTGTTGATGTGAAACCAC+AGG 0.622253 8_1:+76559263 None:intergenic
TTGCTGGGCTATAGGGAAGA+CGG 0.622634 8_1:+76561699 None:intergenic
TGCCTCCGGATCAAACCTCC+CGG 0.622961 8_1:-76562457 Msa1215320:CDS
ATTCCTCACTGCAACGCCTG+CGG 0.624299 8_1:-76562400 Msa1215320:CDS
GATCCATGAAAAGGTGGACA+AGG 0.624629 8_1:-76561330 Msa1215320:CDS
TCGGCCTCACCATTGCAAGA+AGG 0.626312 8_1:+76559159 None:intergenic
GTGTATGAATGGAGAAGTCA+TGG 0.626462 8_1:+76558495 None:intergenic
AAGTTGATGAAAACATTGTG+AGG 0.627661 8_1:-76558669 Msa1215320:CDS
GATGTTATGTGTATGGCCTG+TGG 0.629984 8_1:-76559279 Msa1215320:CDS
CACGATCGTAAACCTGATCA+CGG 0.630349 8_1:+76562209 None:intergenic
CATCACCTGTGCCAATCATG+AGG 0.630458 8_1:+76558576 None:intergenic
TCACACCTGTGCTATCTCGA+TGG 0.632252 8_1:-76560234 Msa1215320:CDS
AGACCGCAGGCGTTGCAGTG+AGG 0.634031 8_1:+76562397 None:intergenic
TTGGGATATCTACCTTGATG+GGG 0.634651 8_1:-76559122 Msa1215320:CDS
CTCAGGAAGTAATTTCTCAA+CGG 0.634756 8_1:+76561899 None:intergenic
GGTGCATTTCAATCATCTAG+AGG 0.635544 8_1:+76557932 None:intergenic
TCTCAGAAAGCGGCGCCGAG+TGG 0.636018 8_1:-76562083 Msa1215320:CDS
GGAATGGTTTGGTGGAAGAG+CGG 0.636084 8_1:+76562494 None:intergenic
GTCATGTCCTCCAAAATCAA+CGG 0.636395 8_1:-76562559 Msa1215320:CDS
CAAGTGAGATGTCTACGCAT+GGG 0.638098 8_1:+76559235 None:intergenic
ATATGGAAGCAAGAAACAAG+GGG 0.638379 8_1:+76558988 None:intergenic
TTGAAGGACGGTAATCCACT+CGG 0.644376 8_1:+76562068 None:intergenic
GGCTGAGATTCAGAGTGGGA+GGG 0.646527 8_1:+76562660 None:intergenic
TAACACCATCGAGATAGCAC+AGG 0.651735 8_1:+76560229 None:intergenic
AACGTTCCTGATTTCCCGCG+GGG 0.652139 8_1:-76561995 Msa1215320:CDS
TGATGGGATCCATGAAAAGG+TGG 0.653101 8_1:-76561336 Msa1215320:CDS
TTGCAGTGAGGAATTTCGTG+AGG 0.654104 8_1:+76562409 None:intergenic
ATGGTTTGGTGGAAGAGCGG+CGG 0.661966 8_1:+76562497 None:intergenic
CAACGGCTGAGATTCAGAGT+GGG 0.664470 8_1:+76562656 None:intergenic
AACTAATATCAAGATTCGAG+GGG 0.670063 8_1:+76558285 None:intergenic
GTAGATCCGGAGTTGAAGGA+CGG 0.681063 8_1:+76562056 None:intergenic
GCTTCTGATTGAGATTAAGG+AGG 0.681178 8_1:+76559853 None:intergenic
ACTAATATCAAGATTCGAGG+GGG 0.683193 8_1:+76558286 None:intergenic
GGTCTGTGCGATCACGACTG+CGG 0.684411 8_1:+76562177 None:intergenic
TCAACGGCTGAGATTCAGAG+TGG 0.692651 8_1:+76562655 None:intergenic
AGGAAGTAATTTCTCAACGG+TGG 0.695104 8_1:+76561902 None:intergenic
AGTTGATGAAAACATTGTGA+GGG 0.699031 8_1:-76558668 Msa1215320:CDS
ATGACCAGGAGACATTGATG+CGG 0.728953 8_1:+76562279 None:intergenic
GGCGGCGTGAGAAATGACAC+CGG 0.740854 8_1:+76562309 None:intergenic
GACTTGGAACCAAATCAAGG+GGG 0.743974 8_1:-76559213 Msa1215320:CDS
GGAAGAGTGACATGATACAG+CGG 0.752026 8_1:+76562336 None:intergenic
CTCCGGATCAAACCTCCCGG+CGG 0.757304 8_1:-76562454 Msa1215320:CDS
GGCGTGAGAAATGACACCGG+CGG 0.784348 8_1:+76562312 None:intergenic
GAATTTCGTGAGGATCACGG+CGG 0.842560 8_1:+76562419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAAAAAATAAAACAAAA+GGG + chr8_1:76561196-76561215 None:intergenic 10.0%
!! AACTAAAAAAATAAAACAAA+AGG + chr8_1:76561197-76561216 None:intergenic 10.0%
!! AATATAAATACAAATAAAGT+AGG + chr8_1:76562516-76562535 None:intergenic 10.0%
!! AAATACAAAAAATCAAAACA+GGG + chr8_1:76559498-76559517 None:intergenic 15.0%
!!! TATTTTTGATCAAATCTTTT+AGG - chr8_1:76559745-76559764 Msa1215320:intron 15.0%
!!! GTTTTTAGAATTTATTCACT+GGG - chr8_1:76559168-76559187 Msa1215320:CDS 20.0%
!! CAAATACAAAAAATCAAAAC+AGG + chr8_1:76559499-76559518 None:intergenic 20.0%
!!! CTGTTTTGATTTTTTGTATT+TGG - chr8_1:76559497-76559516 Msa1215320:intron 20.0%
!!! CAACAAAATACTATTTTTCT+AGG - chr8_1:76559660-76559679 Msa1215320:intron 20.0%
!! GATATATTTCAGTATCTTTA+AGG + chr8_1:76559902-76559921 None:intergenic 20.0%
!! TCATCTTAAATAATGGTAAA+TGG - chr8_1:76559962-76559981 Msa1215320:intron 20.0%
!! TTATGTTCTTGAAAATCTAA+TGG + chr8_1:76560164-76560183 None:intergenic 20.0%
!! TAATCTAGTATACAATCTAA+AGG + chr8_1:76560189-76560208 None:intergenic 20.0%
!! TATTTGTTTCAAAATGAAGT+TGG - chr8_1:76561066-76561085 Msa1215320:intron 20.0%
!!! TTAATTTTCTTGTGTATGAA+TGG + chr8_1:76562219-76562238 None:intergenic 20.0%
!! CACAAGAAAATTAAAAAACA+AGG - chr8_1:76562225-76562244 Msa1215320:CDS 20.0%
!! ACAAAAAACAAAAAGAGAAA+TGG + chr8_1:76562546-76562565 None:intergenic 20.0%
!!! CTCTTTTTGTTTTTTGTTTT+TGG - chr8_1:76562549-76562568 Msa1215320:CDS 20.0%
!!! TCAAGATTTCATTTTTGTGA+GGG + chr8_1:76558008-76558027 None:intergenic 25.0%
!!! ATCAAGATTTCATTTTTGTG+AGG + chr8_1:76558009-76558028 None:intergenic 25.0%
! AAACACTTGTTTCATGAATT+CGG - chr8_1:76558752-76558771 Msa1215320:CDS 25.0%
!!! CGTTTTTAGAATTTATTCAC+TGG - chr8_1:76559167-76559186 Msa1215320:CDS 25.0%
! TTATTCACTGGGTTTATATT+TGG - chr8_1:76559179-76559198 Msa1215320:CDS 25.0%
!!! AGTTATTTGAGTTGTTGTTA+TGG - chr8_1:76559255-76559274 Msa1215320:CDS 25.0%
!! TTTTTCATTTCAATGCTTGA+TGG - chr8_1:76559347-76559366 Msa1215320:intron 25.0%
!! TTTTCATTTCAATGCTTGAT+GGG - chr8_1:76559348-76559367 Msa1215320:intron 25.0%
! AAACAGTGACACAAATTTAT+TGG - chr8_1:76559430-76559449 Msa1215320:intron 25.0%
! AAATTTCAACATACTTCACA+GGG + chr8_1:76559591-76559610 None:intergenic 25.0%
! AAAATTTCAACATACTTCAC+AGG + chr8_1:76559592-76559611 None:intergenic 25.0%
!!! GTGTCATTTATCTTCAATAA+TGG + chr8_1:76559847-76559866 None:intergenic 25.0%
! AAGGTATGTATGTTTGTATA+GGG + chr8_1:76559883-76559902 None:intergenic 25.0%
! TAAGGTATGTATGTTTGTAT+AGG + chr8_1:76559884-76559903 None:intergenic 25.0%
!! GTGTCATTCATCTTAAATAA+TGG - chr8_1:76559955-76559974 Msa1215320:intron 25.0%
!! AATTTTTGCCTATGAAACAA+GGG + chr8_1:76560057-76560076 None:intergenic 25.0%
!! TAATTTTTGCCTATGAAACA+AGG + chr8_1:76560058-76560077 None:intergenic 25.0%
! TTCCTAACTATAAAACCATA+CGG + chr8_1:76560082-76560101 None:intergenic 25.0%
!! TTTGAAACTTAAAGAGTAAG+AGG - chr8_1:76560106-76560125 Msa1215320:intron 25.0%
!!! AAGAGTATTCTGAATCATTT+TGG + chr8_1:76560339-76560358 None:intergenic 25.0%
! TTATCATAACATTGAAATGC+AGG - chr8_1:76560372-76560391 Msa1215320:intron 25.0%
! TATCATAACATTGAAATGCA+GGG - chr8_1:76560373-76560392 Msa1215320:intron 25.0%
! TCCTATATGATGAATTGAAT+AGG + chr8_1:76560541-76560560 None:intergenic 25.0%
! TATCTAAACATGGAAAAAAG+AGG + chr8_1:76560598-76560617 None:intergenic 25.0%
!! AAACTTTTGGCATTTTATGT+GGG + chr8_1:76560777-76560796 None:intergenic 25.0%
!! AAAACTTTTGGCATTTTATG+TGG + chr8_1:76560778-76560797 None:intergenic 25.0%
! TAGACATCAAGTCAATTTAT+CGG - chr8_1:76561035-76561054 Msa1215320:intron 25.0%
! TTTACAATGGTTGCAAAATT+AGG - chr8_1:76561122-76561141 Msa1215320:intron 25.0%
! AAACCTCAATTTAATACAAC+AGG - chr8_1:76561168-76561187 Msa1215320:intron 25.0%
!! AGTGCTCAAATCTTTTTATA+TGG + chr8_1:76561732-76561751 None:intergenic 25.0%
! CTTCAAGAAAAAAAATGTCA+AGG - chr8_1:76561752-76561771 Msa1215320:CDS 25.0%
! AAGAAAAAAAATGTCAAGGA+AGG - chr8_1:76561756-76561775 Msa1215320:CDS 25.0%
!! AACAGAATATTTCCTTTTGA+TGG - chr8_1:76561859-76561878 Msa1215320:CDS 25.0%
!! ACAGAATATTTCCTTTTGAT+GGG - chr8_1:76561860-76561879 Msa1215320:CDS 25.0%
! CTATAAAGCAACTGATAAAT+CGG - chr8_1:76562098-76562117 Msa1215320:CDS 25.0%
!!! TGCAATTGTGTATCATTTTT+TGG - chr8_1:76562275-76562294 Msa1215320:CDS 25.0%
!!! GCAATTGTGTATCATTTTTT+GGG - chr8_1:76562276-76562295 Msa1215320:CDS 25.0%
! TATGGATTCCTTATAATTTG+TGG - chr8_1:76562385-76562404 Msa1215320:CDS 25.0%
! GGTAAAAACCACAAATTATA+AGG + chr8_1:76562396-76562415 None:intergenic 25.0%
!!! TTTAGTGCTTTTTCGTTTTT+GGG + chr8_1:76562594-76562613 None:intergenic 25.0%
! TCCAGAAAATGTCATAAAAA+AGG - chr8_1:76562644-76562663 Msa1215320:five_prime_UTR 25.0%
!!! TCCTTTTTTATGACATTTTC+TGG + chr8_1:76562648-76562667 None:intergenic 25.0%
GATAGTAAAGTTAGGTTTCA+AGG + chr8_1:76558087-76558106 None:intergenic 30.0%
AATGGATGGATAGTAAAGTT+AGG + chr8_1:76558095-76558114 None:intergenic 30.0%
AAAAGAAATGGAGAGAACAA+TGG - chr8_1:76558909-76558928 Msa1215320:CDS 30.0%
GAGAACAATGGAACAAAAAA+TGG - chr8_1:76558921-76558940 Msa1215320:CDS 30.0%
!! ATTATGCTTAGCTTGTGATA+TGG - chr8_1:76558947-76558966 Msa1215320:CDS 30.0%
!!! TATGTTCTCTGCTGTTTTTT+CGG - chr8_1:76558974-76558993 Msa1215320:CDS 30.0%
!! TTTGGATTGGTTATTAGTGA+CGG - chr8_1:76559197-76559216 Msa1215320:CDS 30.0%
AATACATTACCTTCATTGTG+TGG + chr8_1:76559407-76559426 None:intergenic 30.0%
AAAACAGGGACAATTATACT+TGG + chr8_1:76559484-76559503 None:intergenic 30.0%
!!! GAGGATTTGGTTCTATTTTA+TGG - chr8_1:76559528-76559547 Msa1215320:intron 30.0%
! GTTCTATTTTATGGCATGAA+AGG - chr8_1:76559537-76559556 Msa1215320:intron 30.0%
! AGTAGTGTTATTATCGTGTT+GGG + chr8_1:76559822-76559841 None:intergenic 30.0%
! AAGTAGTGTTATTATCGTGT+TGG + chr8_1:76559823-76559842 None:intergenic 30.0%
TATGTATGTTTGTATAGGGA+TGG + chr8_1:76559879-76559898 None:intergenic 30.0%
!! AAATGGTGTTATTATCGTGT+TGG - chr8_1:76559979-76559998 Msa1215320:intron 30.0%
ATAGGCAAAAATTAACCGTA+TGG - chr8_1:76560064-76560083 Msa1215320:intron 30.0%
!!! AACCGTATGGTTTTATAGTT+AGG - chr8_1:76560077-76560096 Msa1215320:intron 30.0%
! ATTGATTTACTGATACTCAC+AGG + chr8_1:76560508-76560527 None:intergenic 30.0%
ATGATGAATTGAATAGGCTA+GGG + chr8_1:76560535-76560554 None:intergenic 30.0%
TATGATGAATTGAATAGGCT+AGG + chr8_1:76560536-76560555 None:intergenic 30.0%
GCCTATTCAATTCATCATAT+AGG - chr8_1:76560537-76560556 Msa1215320:intron 30.0%
CTTGTTCGATTATCTAAACA+TGG + chr8_1:76560608-76560627 None:intergenic 30.0%
CATGTTTAGATAATCGAACA+AGG - chr8_1:76560606-76560625 Msa1215320:intron 30.0%
TATACTTCTATCACATTCAC+GGG + chr8_1:76560672-76560691 None:intergenic 30.0%
CTATACTTCTATCACATTCA+CGG + chr8_1:76560673-76560692 None:intergenic 30.0%
! ATGTGATAGAAGTATAGAAC+TGG - chr8_1:76560676-76560695 Msa1215320:intron 30.0%
! TGTGATAGAAGTATAGAACT+GGG - chr8_1:76560677-76560696 Msa1215320:intron 30.0%
! ACTGGGTTTTTGTAAATTCT+TGG - chr8_1:76560694-76560713 Msa1215320:intron 30.0%
! TACCACATAAGATTTTTCCA+AGG + chr8_1:76560732-76560751 None:intergenic 30.0%
! TGTACAGAGACAAAAACTTT+TGG + chr8_1:76560790-76560809 None:intergenic 30.0%
! AATCAGTTCAGAATGTGTTT+TGG - chr8_1:76560897-76560916 Msa1215320:intron 30.0%
GGGTAACATTAAAACACATT+CGG - chr8_1:76560946-76560965 Msa1215320:intron 30.0%
CCATTGTAAAACTAAACTTC+TGG + chr8_1:76561112-76561131 None:intergenic 30.0%
!!! CCAGAAGTTTAGTTTTACAA+TGG - chr8_1:76561109-76561128 Msa1215320:intron 30.0%
GTAGCAAATAAGTTCATTGT+TGG + chr8_1:76561222-76561241 None:intergenic 30.0%
ATTTACAAGAGCAGAGAAAT+TGG - chr8_1:76561612-76561631 Msa1215320:intron 30.0%
TTTACAAGAGCAGAGAAATT+GGG - chr8_1:76561613-76561632 Msa1215320:intron 30.0%
TATATGGAAGCAAGAAACAA+GGG + chr8_1:76561716-76561735 None:intergenic 30.0%
TTATATGGAAGCAAGAAACA+AGG + chr8_1:76561717-76561736 None:intergenic 30.0%
AAAAAAAATGTCAAGGAAGG+TGG - chr8_1:76561759-76561778 Msa1215320:CDS 30.0%
! CAGAATATTTCCTTTTGATG+GGG - chr8_1:76561861-76561880 Msa1215320:CDS 30.0%
!! AAGTTGATGAAAACATTGTG+AGG - chr8_1:76562031-76562050 Msa1215320:CDS 30.0%
!! AGTTGATGAAAACATTGTGA+GGG - chr8_1:76562032-76562051 Msa1215320:CDS 30.0%
GACATTAAATGCCAATGATT+TGG + chr8_1:76562152-76562171 None:intergenic 30.0%
ATCATTGGCATTTAATGTCA+TGG - chr8_1:76562153-76562172 Msa1215320:CDS 30.0%
GAGAGTTAATACTTTCATGT+TGG - chr8_1:76562305-76562324 Msa1215320:CDS 30.0%
AACTAATATCAAGATTCGAG+GGG + chr8_1:76562418-76562437 None:intergenic 30.0%
CAACTAATATCAAGATTCGA+GGG + chr8_1:76562419-76562438 None:intergenic 30.0%
ACAACTAATATCAAGATTCG+AGG + chr8_1:76562420-76562439 None:intergenic 30.0%
!! ATTTTCAAAGCATCAAAGAG+GGG + chr8_1:76562454-76562473 None:intergenic 30.0%
!! GATTTTCAAAGCATCAAAGA+GGG + chr8_1:76562455-76562474 None:intergenic 30.0%
!! TGATTTTCAAAGCATCAAAG+AGG + chr8_1:76562456-76562475 None:intergenic 30.0%
!! CTTTGATGCTTTGAAAATCA+AGG - chr8_1:76562456-76562475 Msa1215320:CDS 30.0%
!!! TTGTTTTTGGTAGTGAAAGA+CGG - chr8_1:76562562-76562581 Msa1215320:exon 30.0%
!!! CTTTAGTGCTTTTTCGTTTT+TGG + chr8_1:76562595-76562614 None:intergenic 30.0%
GTCATAAAAAAGGAGACTTA+AGG - chr8_1:76562654-76562673 Msa1215320:five_prime_UTR 30.0%
! GACTAATTTTATCTTCTCTC+TGG + chr8_1:76562722-76562741 None:intergenic 30.0%
!! AGGAAAATAGAAGTGTTGAT+TGG + chr8_1:76562747-76562766 None:intergenic 30.0%
AAGTTAGGTTTCAAGGTCTT+TGG + chr8_1:76558080-76558099 None:intergenic 35.0%
GATAATGTGAATGGATCGAA+TGG + chr8_1:76558113-76558132 None:intergenic 35.0%
!! CGGTGATTTGATAATGTGAA+TGG + chr8_1:76558122-76558141 None:intergenic 35.0%
!!! TGAAATCTGACCGTTGATTT+TGG + chr8_1:76558154-76558173 None:intergenic 35.0%
CTCAGGAAGTAATTTCTCAA+CGG + chr8_1:76558804-76558823 None:intergenic 35.0%
TCCTGAGTGATAAGCATAAT+CGG - chr8_1:76558817-76558836 Msa1215320:CDS 35.0%
! ATTTCTTTTCGCAGTTGCTA+TGG + chr8_1:76558898-76558917 None:intergenic 35.0%
ATAGCAACTGCGAAAAGAAA+TGG - chr8_1:76558897-76558916 Msa1215320:CDS 35.0%
!!! ATGTTCTCTGCTGTTTTTTC+GGG - chr8_1:76558975-76558994 Msa1215320:CDS 35.0%
TTGTACAGGTGTGTATACTT+TGG - chr8_1:76559029-76559048 Msa1215320:CDS 35.0%
CACTGGGTTTATATTTGGAT+TGG - chr8_1:76559184-76559203 Msa1215320:CDS 35.0%
TGTTGTTATGGTGTTTCAGT+TGG - chr8_1:76559267-76559286 Msa1215320:CDS 35.0%
! TGTACTTGCTAGAATCTGTA+AGG - chr8_1:76559618-76559637 Msa1215320:intron 35.0%
! TATCCAGTGTCGAATAGTAT+AGG - chr8_1:76559918-76559937 Msa1215320:intron 35.0%
! ATCCAGTGTCGAATAGTATA+GGG - chr8_1:76559919-76559938 Msa1215320:intron 35.0%
AGTAAGAGGATACTGATCTT+TGG - chr8_1:76560120-76560139 Msa1215320:intron 35.0%
!! CTAACTCTTTGGCTTGTAAT+GGG + chr8_1:76560220-76560239 None:intergenic 35.0%
ATTATGCTGAGCTAACTCTT+TGG + chr8_1:76560231-76560250 None:intergenic 35.0%
! AGTTACAAACATGCTGACTA+TGG - chr8_1:76560254-76560273 Msa1215320:CDS 35.0%
! GTTACAAACATGCTGACTAT+GGG - chr8_1:76560255-76560274 Msa1215320:CDS 35.0%
ATTTACTGATACTCACAGGA+AGG + chr8_1:76560504-76560523 None:intergenic 35.0%
! GAAAAAAGAGGTGGTGTTAA+CGG + chr8_1:76560586-76560605 None:intergenic 35.0%
CTAAACATGGAAAAAAGAGG+TGG + chr8_1:76560595-76560614 None:intergenic 35.0%
ATACTTCTATCACATTCACG+GGG + chr8_1:76560671-76560690 None:intergenic 35.0%
AGCCTTGGAAAAATCTTATG+TGG - chr8_1:76560727-76560746 Msa1215320:intron 35.0%
TGTACAGTAGTTATGTTTCC+TGG - chr8_1:76560804-76560823 Msa1215320:intron 35.0%
TCAATCAGAAGCCCATAATT+AGG - chr8_1:76560858-76560877 Msa1215320:intron 35.0%
ACAAACAGGGTCCTAATTAT+GGG + chr8_1:76560872-76560891 None:intergenic 35.0%
AACAAACAGGGTCCTAATTA+TGG + chr8_1:76560873-76560892 None:intergenic 35.0%
!! AACTGATTCTGGAACAAACA+GGG + chr8_1:76560885-76560904 None:intergenic 35.0%
! AACACATTCTGAACTGATTC+TGG + chr8_1:76560896-76560915 None:intergenic 35.0%
ACATTCGGTTCCTAATTATG+AGG - chr8_1:76560961-76560980 Msa1215320:intron 35.0%
! CAGTTTTGCTCCTCATAATT+AGG + chr8_1:76560974-76560993 None:intergenic 35.0%
TATAGCCTCTAACAATTGTG+TGG + chr8_1:76560999-76561018 None:intergenic 35.0%
!!! AAATTGAGGTTTTCAAGTGC+AGG + chr8_1:76561160-76561179 None:intergenic 35.0%
GAGCCTGTTGTATTAAATTG+AGG + chr8_1:76561174-76561193 None:intergenic 35.0%
CCTGCACAATCAATAAAATG+TGG + chr8_1:76561352-76561371 None:intergenic 35.0%
!! CCACATTTTATTGATTGTGC+AGG - chr8_1:76561349-76561368 Msa1215320:CDS 35.0%
CGATTGTTGTATTGCTCATA+GGG - chr8_1:76561375-76561394 Msa1215320:CDS 35.0%
!! TTGACTTGGAACCAAATCAA+GGG - chr8_1:76561485-76561504 Msa1215320:intron 35.0%
! AGGTAGATATCCCAAAGTTT+TGG + chr8_1:76561573-76561592 None:intergenic 35.0%
! TTTGGGATATCTACCTTGAT+GGG - chr8_1:76561577-76561596 Msa1215320:intron 35.0%
TTACAAGAGCAGAGAAATTG+GGG - chr8_1:76561614-76561633 Msa1215320:intron 35.0%
ATATGGAAGCAAGAAACAAG+GGG + chr8_1:76561715-76561734 None:intergenic 35.0%
AGAATGGGAACTGCAAATAA+CGG + chr8_1:76561786-76561805 None:intergenic 35.0%
AAGATTGAGGATGAGAGATA+AGG + chr8_1:76561823-76561842 None:intergenic 35.0%
ATCTCTCATCCTCAATCTTA+AGG - chr8_1:76561824-76561843 Msa1215320:CDS 35.0%
! CAAAGATCATTTGAAGCATC+AGG + chr8_1:76561892-76561911 None:intergenic 35.0%
ATCTGCGATTAAGCAATCAA+TGG - chr8_1:76561980-76561999 Msa1215320:CDS 35.0%
GTACAAGTGTGATGATTCTT+GGG - chr8_1:76562002-76562021 Msa1215320:CDS 35.0%
!!! AACGAGCCAGTATTTTTTGT+AGG - chr8_1:76562335-76562354 Msa1215320:CDS 35.0%
ACTAATATCAAGATTCGAGG+GGG + chr8_1:76562417-76562436 None:intergenic 35.0%
CATTTCAATCATCTAGAGGA+AGG + chr8_1:76562767-76562786 None:intergenic 35.0%
GGATGGAAGAGAGTAAAAGT+AGG - chr8_1:76557945-76557964 Msa1215320:three_prime_UTR 40.0%
TCTTTGGATCGGAGAATCAA+CGG + chr8_1:76558064-76558083 None:intergenic 40.0%
AGGTTTCAAGGTCTTTGGAT+CGG + chr8_1:76558075-76558094 None:intergenic 40.0%
ATGTGAATGGATCGAATGGA+TGG + chr8_1:76558109-76558128 None:intergenic 40.0%
!! GTTGATTTTGGAGGACATGA+CGG + chr8_1:76558142-76558161 None:intergenic 40.0%
GTCATGTCCTCCAAAATCAA+CGG - chr8_1:76558141-76558160 Msa1215320:intron 40.0%
!!! AATCTGACCGTTGATTTTGG+AGG + chr8_1:76558151-76558170 None:intergenic 40.0%
!! TTTCATGAATTCGGTGTTGC+AGG - chr8_1:76558761-76558780 Msa1215320:CDS 40.0%
AGGAAGTAATTTCTCAACGG+TGG + chr8_1:76558801-76558820 None:intergenic 40.0%
ACCGATTATGCTTATCACTC+AGG + chr8_1:76558821-76558840 None:intergenic 40.0%
! CATCAGCATTGCTCATTTTC+TGG + chr8_1:76558851-76558870 None:intergenic 40.0%
AAGAACTTTGCTGGGCTATA+GGG + chr8_1:76559011-76559030 None:intergenic 40.0%
ACCTGTACAAGAACTTTGCT+GGG + chr8_1:76559019-76559038 None:intergenic 40.0%
!! GTGTGTATACTTTGGAGCTT+AGG - chr8_1:76559037-76559056 Msa1215320:CDS 40.0%
TGTTATGGTGTTTCAGTTGG+TGG - chr8_1:76559270-76559289 Msa1215320:CDS 40.0%
! TTGTTCATAGCTTGCAAGGT+TGG + chr8_1:76559312-76559331 None:intergenic 40.0%
TTTGTATTTGGCTGAGAGAG+AGG - chr8_1:76559509-76559528 Msa1215320:intron 40.0%
! ACTTGCTAGAATCTGTAAGG+TGG - chr8_1:76559621-76559640 Msa1215320:intron 40.0%
ATCTGTAAGGTGGCTTCTAT+TGG - chr8_1:76559631-76559650 Msa1215320:intron 40.0%
AGAAACCAGAGCTTCAACAA+AGG + chr8_1:76559721-76559740 None:intergenic 40.0%
! TGTTGAAGCTCTGGTTTCTT+TGG - chr8_1:76559722-76559741 Msa1215320:intron 40.0%
GGTATGTCTGTTTCAACTCA+TGG - chr8_1:76559766-76559785 Msa1215320:intron 40.0%
TCTGTTTCAACTCATGGCTT+TGG - chr8_1:76559772-76559791 Msa1215320:intron 40.0%
!! TTCAACTCATGGCTTTGGTT+TGG - chr8_1:76559777-76559796 Msa1215320:CDS 40.0%
! AGTGTTATTATCGTGTTGGG+AGG + chr8_1:76559819-76559838 None:intergenic 40.0%
ATCCCTATACTATTCGACAC+TGG + chr8_1:76559924-76559943 None:intergenic 40.0%
! AGTGTCGAATAGTATAGGGA+TGG - chr8_1:76559923-76559942 Msa1215320:intron 40.0%
!! GGTGTTATTATCGTGTTGGA+AGG - chr8_1:76559983-76560002 Msa1215320:intron 40.0%
GTTATTATCGTGTTGGAAGG+TGG - chr8_1:76559986-76560005 Msa1215320:intron 40.0%
! GGATAATGTAGGCTTTGGTT+TGG + chr8_1:76560025-76560044 None:intergenic 40.0%
ATGAAACAAGGGATTGAGGT+GGG + chr8_1:76560046-76560065 None:intergenic 40.0%
TATGAAACAAGGGATTGAGG+TGG + chr8_1:76560047-76560066 None:intergenic 40.0%
! ACCTCAATCCCTTGTTTCAT+AGG - chr8_1:76560046-76560065 Msa1215320:intron 40.0%
!! GCTAACTCTTTGGCTTGTAA+TGG + chr8_1:76560221-76560240 None:intergenic 40.0%
CTGATCAATGTCAACTCCTA+GGG + chr8_1:76560425-76560444 None:intergenic 40.0%
TCTGATCAATGTCAACTCCT+AGG + chr8_1:76560426-76560445 None:intergenic 40.0%
TTCACGGGGTTAAAATGCTA+AGG + chr8_1:76560657-76560676 None:intergenic 40.0%
!! CTTGGCTAAGATTTTAGCCT+TGG - chr8_1:76560712-76560731 Msa1215320:intron 40.0%
AAGGAACTTGCAAAGAAACC+AGG + chr8_1:76560825-76560844 None:intergenic 40.0%
GATTGAGATTAAGGAGGACA+AGG + chr8_1:76560844-76560863 None:intergenic 40.0%
GCTTCTGATTGAGATTAAGG+AGG + chr8_1:76560850-76560869 None:intergenic 40.0%
TGGGCTTCTGATTGAGATTA+AGG + chr8_1:76560853-76560872 None:intergenic 40.0%
!! GAACTGATTCTGGAACAAAC+AGG + chr8_1:76560886-76560905 None:intergenic 40.0%
CTGTTCCACACAATTGTTAG+AGG - chr8_1:76560991-76561010 Msa1215320:intron 40.0%
AACTCTTCAGTGCACAAAGA+AGG + chr8_1:76561244-76561263 None:intergenic 40.0%
CTTGAACTTGCGTTTCATGA+AGG - chr8_1:76561311-76561330 Msa1215320:CDS 40.0%
GCGATTGTTGTATTGCTCAT+AGG - chr8_1:76561374-76561393 Msa1215320:CDS 40.0%
! ATTGCTCATAGGGTATTCTC+TGG - chr8_1:76561385-76561404 Msa1215320:CDS 40.0%
! GGGTATTCTCTGGTATTTTG+CGG - chr8_1:76561395-76561414 Msa1215320:CDS 40.0%
AGTTGTTGATGTGAAACCAC+AGG + chr8_1:76561440-76561459 None:intergenic 40.0%
!! CTTGACTTGGAACCAAATCA+AGG - chr8_1:76561484-76561503 Msa1215320:intron 40.0%
! TGACTTGGAACCAAATCAAG+GGG - chr8_1:76561486-76561505 Msa1215320:intron 40.0%
TTAGTAGAACCCCCTTGATT+TGG + chr8_1:76561499-76561518 None:intergenic 40.0%
!! AGATATCCCAAAGTTTTGGC+TGG + chr8_1:76561569-76561588 None:intergenic 40.0%
!! CTTTGGGATATCTACCTTGA+TGG - chr8_1:76561576-76561595 Msa1215320:intron 40.0%
TTGGGATATCTACCTTGATG+GGG - chr8_1:76561578-76561597 Msa1215320:intron 40.0%
ACTGCTGACAGAAAAACTTC+TGG + chr8_1:76561645-76561664 None:intergenic 40.0%
! GTTTTTCTGTCAGCAGTGTA+AGG - chr8_1:76561648-76561667 Msa1215320:intron 40.0%
CATCCTCAATCTTAAGGAGT+CGG - chr8_1:76561830-76561849 Msa1215320:CDS 40.0%
! AAACCGACTCCTTAAGATTG+AGG + chr8_1:76561836-76561855 None:intergenic 40.0%
TCAATCTTAAGGAGTCGGTT+TGG - chr8_1:76561835-76561854 Msa1215320:CDS 40.0%
GGTACAAGTGTGATGATTCT+TGG - chr8_1:76562001-76562020 Msa1215320:CDS 40.0%
TAAATCGGTTGCCTCATGAT+TGG - chr8_1:76562113-76562132 Msa1215320:CDS 40.0%
GAAGTCATGGCATATCGTTA+GGG + chr8_1:76562195-76562214 None:intergenic 40.0%
AGAAGTCATGGCATATCGTT+AGG + chr8_1:76562196-76562215 None:intergenic 40.0%
GTGTATGAATGGAGAAGTCA+TGG + chr8_1:76562208-76562227 None:intergenic 40.0%
! GGAGTGCCTACAAAAAATAC+TGG + chr8_1:76562344-76562363 None:intergenic 40.0%
! TCCAACTTTCTGGAAACTTG+AGG - chr8_1:76562361-76562380 Msa1215320:CDS 40.0%
! CCAACTTTCTGGAAACTTGA+GGG - chr8_1:76562362-76562381 Msa1215320:CDS 40.0%
! TTTCTGGAAACTTGAGGGTA+TGG - chr8_1:76562367-76562386 Msa1215320:CDS 40.0%
! TTTTCTGGACTTGCATGTCT+AGG + chr8_1:76562633-76562652 None:intergenic 40.0%
TTACGAAGACTTCTCCTGAT+GGG + chr8_1:76562681-76562700 None:intergenic 40.0%
GGTGCATTTCAATCATCTAG+AGG + chr8_1:76562771-76562790 None:intergenic 40.0%
AAAATATGGAGCGAAAGGGG+TGG - chr8_1:76557918-76557937 Msa1215320:three_prime_UTR 45.0%
AAATATGGAGCGAAAGGGGT+GGG - chr8_1:76557919-76557938 Msa1215320:three_prime_UTR 45.0%
GAGGAATTTCGTGAGGATCA+CGG + chr8_1:76558287-76558306 None:intergenic 45.0%
TTGCAGTGAGGAATTTCGTG+AGG + chr8_1:76558294-76558313 None:intergenic 45.0%
GGAAGAGTGACATGATACAG+CGG + chr8_1:76558367-76558386 None:intergenic 45.0%
ATGACCAGGAGACATTGATG+CGG + chr8_1:76558424-76558443 None:intergenic 45.0%
CACGATCGTAAACCTGATCA+CGG + chr8_1:76558494-76558513 None:intergenic 45.0%
GATGCGGAGTAGATGACATA+GGG + chr8_1:76558590-76558609 None:intergenic 45.0%
TATGTCATCTACTCCGCATC+CGG - chr8_1:76558590-76558609 Msa1215320:exon 45.0%
!! TTTCTGAGATTCTCCGGATG+CGG + chr8_1:76558606-76558625 None:intergenic 45.0%
ATCCGGAGAATCTCAGAAAG+CGG - chr8_1:76558607-76558626 Msa1215320:CDS 45.0%
TTGAAGGACGGTAATCCACT+CGG + chr8_1:76558635-76558654 None:intergenic 45.0%
GGGAAATCAGGAACGTTGAT+CGG + chr8_1:76558702-76558721 None:intergenic 45.0%
! AATGCTGATGATGCCGCAAA+TGG - chr8_1:76558861-76558880 Msa1215320:CDS 45.0%
GGCAGAATCATCACCATTTG+CGG + chr8_1:76558877-76558896 None:intergenic 45.0%
CAAGAACTTTGCTGGGCTAT+AGG + chr8_1:76559012-76559031 None:intergenic 45.0%
CACCTGTACAAGAACTTTGC+TGG + chr8_1:76559020-76559039 None:intergenic 45.0%
ATGCCTTTGATCAGAGGTCT+CGG + chr8_1:76559082-76559101 None:intergenic 45.0%
CTGGATATGCCTTTGATCAG+AGG + chr8_1:76559088-76559107 None:intergenic 45.0%
CAACACTGACACATCAACAC+TGG + chr8_1:76559107-76559126 None:intergenic 45.0%
! ATAGCTTGCAAGGTTGGACT+TGG + chr8_1:76559306-76559325 None:intergenic 45.0%
! CCTGTTGTTCATAGCTTGCA+AGG + chr8_1:76559316-76559335 None:intergenic 45.0%
CCTTGCAAGCTATGAACAAC+AGG - chr8_1:76559313-76559332 Msa1215320:CDS 45.0%
GCTTGATGGGATCCATGAAA+AGG - chr8_1:76559361-76559380 Msa1215320:intron 45.0%
TGATGGGATCCATGAAAAGG+TGG - chr8_1:76559364-76559383 Msa1215320:intron 45.0%
GATCCATGAAAAGGTGGACA+AGG - chr8_1:76559370-76559389 Msa1215320:intron 45.0%
! GATCCTTGTCCACCTTTTCA+TGG + chr8_1:76559376-76559395 None:intergenic 45.0%
TTTGGCTGAGAGAGAGGATT+TGG - chr8_1:76559515-76559534 Msa1215320:intron 45.0%
CTTCACAGGGACAACATATC+TGG + chr8_1:76559578-76559597 None:intergenic 45.0%
TCGAACCTTTGTTGAAGCTC+TGG - chr8_1:76559713-76559732 Msa1215320:intron 45.0%
GTTATTATCGTGTTGGGAGG+AGG + chr8_1:76559816-76559835 None:intergenic 45.0%
GTCGAATAGTATAGGGATGG+CGG - chr8_1:76559926-76559945 Msa1215320:intron 45.0%
AGGTGGGATAATGTAGGCTT+TGG + chr8_1:76560030-76560049 None:intergenic 45.0%
GGATTGAGGTGGGATAATGT+AGG + chr8_1:76560036-76560055 None:intergenic 45.0%
GCCTATGAAACAAGGGATTG+AGG + chr8_1:76560050-76560069 None:intergenic 45.0%
TAACATTGAAATGCAGGGCG+AGG - chr8_1:76560378-76560397 Msa1215320:intron 45.0%
AACATTGAAATGCAGGGCGA+GGG - chr8_1:76560379-76560398 Msa1215320:intron 45.0%
TAACACCATCGAGATAGCAC+AGG + chr8_1:76560474-76560493 None:intergenic 45.0%
! TGCTATCTCGATGGTGTTAG+CGG - chr8_1:76560475-76560494 Msa1215320:intron 45.0%
ATGCTAAGGCAACTTTCTCC+CGG + chr8_1:76560643-76560662 None:intergenic 45.0%
GCGGTCAGATGTTATGTGTA+TGG - chr8_1:76561414-76561433 Msa1215320:CDS 45.0%
GATGTTATGTGTATGGCCTG+TGG - chr8_1:76561421-76561440 Msa1215320:intron 45.0%
CAAGTGAGATGTCTACGCAT+GGG + chr8_1:76561468-76561487 None:intergenic 45.0%
TCAAGTGAGATGTCTACGCA+TGG + chr8_1:76561469-76561488 None:intergenic 45.0%
CGTAGACATCTCACTTGACT+TGG - chr8_1:76561471-76561490 Msa1215320:intron 45.0%
GACTTGGAACCAAATCAAGG+GGG - chr8_1:76561487-76561506 Msa1215320:intron 45.0%
TCAAGGGGGTTCTACTAAGA+TGG - chr8_1:76561501-76561520 Msa1215320:intron 45.0%
GCTTCCAATCCTTCTTGCAA+TGG - chr8_1:76561532-76561551 Msa1215320:intron 45.0%
CTCACCATTGCAAGAAGGAT+TGG + chr8_1:76561539-76561558 None:intergenic 45.0%
CAATCCTTCTTGCAATGGTG+AGG - chr8_1:76561537-76561556 Msa1215320:intron 45.0%
!!! CCCAAAGTTTTGGCTGGAAT+CGG + chr8_1:76561563-76561582 None:intergenic 45.0%
CCGATTCCAGCCAAAACTTT+GGG - chr8_1:76561560-76561579 Msa1215320:intron 45.0%
CTCTCAAGCAGATGTCCATA+AGG - chr8_1:76561683-76561702 Msa1215320:intron 45.0%
AACAAGGGGAAGCTTCCTTA+TGG + chr8_1:76561701-76561720 None:intergenic 45.0%
TTTGCAGTTCCCATTCTCAC+TGG - chr8_1:76561789-76561808 Msa1215320:CDS 45.0%
GTGACATGTCCAGTGAGAAT+GGG + chr8_1:76561801-76561820 None:intergenic 45.0%
CACTCTGGTAAGTTAGATGC+TGG - chr8_1:76561943-76561962 Msa1215320:CDS 45.0%
! CAGGTGATGGTCCAAATCAT+TGG - chr8_1:76562138-76562157 Msa1215320:CDS 45.0%
TTGTAGGCACTCCAACTTTC+TGG - chr8_1:76562351-76562370 Msa1215320:CDS 45.0%
CCCTCAAGTTTCCAGAAAGT+TGG + chr8_1:76562365-76562384 None:intergenic 45.0%
! TTCAAAGCATCAAAGAGGGG+AGG + chr8_1:76562451-76562470 None:intergenic 45.0%
GTTACGAAGACTTCTCCTGA+TGG + chr8_1:76562682-76562701 None:intergenic 45.0%
AGATTCAGAGTGGGAGGGAA+TGG + chr8_1:76558038-76558057 None:intergenic 50.0%
CAACGGCTGAGATTCAGAGT+GGG + chr8_1:76558047-76558066 None:intergenic 50.0%
TCAACGGCTGAGATTCAGAG+TGG + chr8_1:76558048-76558067 None:intergenic 50.0%
!! GGAATGGTTTGGTGGAAGAG+CGG + chr8_1:76558209-76558228 None:intergenic 50.0%
ATGGAGGGAGAGGAATGGTT+TGG + chr8_1:76558220-76558239 None:intergenic 50.0%
CAGTTATGGAGGGAGAGGAA+TGG + chr8_1:76558225-76558244 None:intergenic 50.0%
GTTTGATCCGGAGGCAGTTA+TGG + chr8_1:76558239-76558258 None:intergenic 50.0%
GAATTTCGTGAGGATCACGG+CGG + chr8_1:76558284-76558303 None:intergenic 50.0%
ATGAGATGCAGGCATAGAGG+CGG + chr8_1:76558341-76558360 None:intergenic 50.0%
AGACATTGATGCGGCATGTG+CGG + chr8_1:76558415-76558434 None:intergenic 50.0%
TCGATTGCGATCTGATGACC+AGG + chr8_1:76558438-76558457 None:intergenic 50.0%
GCAAACGCAGCAGAAAAGCT+CGG + chr8_1:76558472-76558491 None:intergenic 50.0%
!! TTTTTCTCCGTCGCCGATTG+TGG + chr8_1:76558556-76558575 None:intergenic 50.0%
GGATGCGGAGTAGATGACAT+AGG + chr8_1:76558591-76558610 None:intergenic 50.0%
GGATTACCGTCCTTCAACTC+CGG - chr8_1:76558638-76558657 Msa1215320:CDS 50.0%
GTAGATCCGGAGTTGAAGGA+CGG + chr8_1:76558647-76558666 None:intergenic 50.0%
TCAACGTTCCTGATTTCCCG+CGG - chr8_1:76558703-76558722 Msa1215320:CDS 50.0%
TTGCGGGGGTTGAACAATCT+CGG - chr8_1:76558729-76558748 Msa1215320:CDS 50.0%
TTGCTGGGCTATAGGGAAGA+CGG + chr8_1:76559004-76559023 None:intergenic 50.0%
GCCCAGCAAAGTTCTTGTAC+AGG - chr8_1:76559015-76559034 Msa1215320:CDS 50.0%
CAGAGGTCTCGGTGATAAAC+AGG + chr8_1:76559071-76559090 None:intergenic 50.0%
TCACCGAGACCTCTGATCAA+AGG - chr8_1:76559076-76559095 Msa1215320:CDS 50.0%
CGACGTAAGCCACACAATGA+AGG - chr8_1:76559395-76559414 Msa1215320:intron 50.0%
TCACACCTGTGCTATCTCGA+TGG - chr8_1:76560466-76560485 Msa1215320:intron 50.0%
GAACAAGGCTTGTCTATCCC+CGG - chr8_1:76560621-76560640 Msa1215320:intron 50.0%
AACAAGGCTTGTCTATCCCC+GGG - chr8_1:76560622-76560641 Msa1215320:intron 50.0%
TGCTAAGGCAACTTTCTCCC+GGG + chr8_1:76560642-76560661 None:intergenic 50.0%
ACTCCTGCATAGAGGGAGTA+TGG - chr8_1:76560925-76560944 Msa1215320:intron 50.0%
! CTCCTGCATAGAGGGAGTAT+GGG - chr8_1:76560926-76560945 Msa1215320:intron 50.0%
TACCCATACTCCCTCTATGC+AGG + chr8_1:76560931-76560950 None:intergenic 50.0%
! GCCGATTCCAGCCAAAACTT+TGG - chr8_1:76561559-76561578 Msa1215320:intron 50.0%
! ATCTACCTTGATGGGGTGCT+TGG - chr8_1:76561585-76561604 Msa1215320:intron 50.0%
TCTATCCAAGCACCCCATCA+AGG + chr8_1:76561593-76561612 None:intergenic 50.0%
TCAGCAGTGTAAGGTGAAGC+AGG - chr8_1:76561657-76561676 Msa1215320:intron 50.0%
GGTGACATGTCCAGTGAGAA+TGG + chr8_1:76561802-76561821 None:intergenic 50.0%
TCAGGCTCATCCCCATCAAA+AGG + chr8_1:76561874-76561893 None:intergenic 50.0%
! TTTGCTGTCGTCACTCACTC+TGG - chr8_1:76561928-76561947 Msa1215320:CDS 50.0%
AAACATTGTGAGGGCTGCTC+AGG - chr8_1:76562041-76562060 Msa1215320:CDS 50.0%
AACATTGTGAGGGCTGCTCA+GGG - chr8_1:76562042-76562061 Msa1215320:CDS 50.0%
CATCACCTGTGCCAATCATG+AGG + chr8_1:76562127-76562146 None:intergenic 50.0%
CTCATGATTGGCACAGGTGA+TGG - chr8_1:76562125-76562144 Msa1215320:CDS 50.0%
AAGCATCAAAGAGGGGAGGA+GGG + chr8_1:76562447-76562466 None:intergenic 50.0%
! AAAGCATCAAAGAGGGGAGG+AGG + chr8_1:76562448-76562467 None:intergenic 50.0%
AGGAGACTTAAGGTCCCATC+AGG - chr8_1:76562664-76562683 Msa1215320:five_prime_UTR 50.0%
GGGCTGCGCTTCACTCAATA+TGG + chr8_1:76557988-76558007 None:intergenic 55.0%
TTCAGAGTGGGAGGGAATGG+AGG + chr8_1:76558035-76558054 None:intergenic 55.0%
GGCTGAGATTCAGAGTGGGA+GGG + chr8_1:76558043-76558062 None:intergenic 55.0%
ACCACAACCATGTCCCCACT+TGG - chr8_1:76558173-76558192 Msa1215320:three_prime_UTR 55.0%
!! ATGGTTTGGTGGAAGAGCGG+CGG + chr8_1:76558206-76558225 None:intergenic 55.0%
! GAGGGAGAGGAATGGTTTGG+TGG + chr8_1:76558217-76558236 None:intergenic 55.0%
TCTCCCTCCATAACTGCCTC+CGG - chr8_1:76558229-76558248 Msa1215320:three_prime_UTR 55.0%
GATCCGGAGGCAGTTATGGA+GGG + chr8_1:76558235-76558254 None:intergenic 55.0%
TGATCCGGAGGCAGTTATGG+AGG + chr8_1:76558236-76558255 None:intergenic 55.0%
ATTCCTCACTGCAACGCCTG+CGG - chr8_1:76558300-76558319 Msa1215320:three_prime_UTR 55.0%
TGAGATGCAGGCATAGAGGC+GGG + chr8_1:76558340-76558359 None:intergenic 55.0%
CGCATGAGATGCAGGCATAG+AGG + chr8_1:76558344-76558363 None:intergenic 55.0%
TCATGTCACTCTTCCACCGC+CGG - chr8_1:76558372-76558391 Msa1215320:three_prime_UTR 55.0%
CATGCCGCATCAATGTCTCC+TGG - chr8_1:76558417-76558436 Msa1215320:three_prime_UTR 55.0%
CAGACCGTTGCGTCCACAAT+CGG - chr8_1:76558540-76558559 Msa1215320:three_prime_UTR 55.0%
!! CGCCGCTTTCTGAGATTCTC+CGG + chr8_1:76558612-76558631 None:intergenic 55.0%
TCGCGTAGATCCGGAGTTGA+AGG + chr8_1:76558651-76558670 None:intergenic 55.0%
CAACGTTCCTGATTTCCCGC+GGG - chr8_1:76558704-76558723 Msa1215320:CDS 55.0%
AACGTTCCTGATTTCCCGCG+GGG - chr8_1:76558705-76558724 Msa1215320:CDS 55.0%
GAAATGCAGGGCGAGGGTTT+AGG - chr8_1:76560385-76560404 Msa1215320:intron 55.0%
! GGTCTCTTGCTTGTTGCCCT+AGG - chr8_1:76560406-76560425 Msa1215320:intron 55.0%
GCTAAGGCAACTTTCTCCCG+GGG + chr8_1:76560641-76560660 None:intergenic 55.0%
TGGACTGCACTCCTGCATAG+AGG - chr8_1:76560917-76560936 Msa1215320:intron 55.0%
GGACTGCACTCCTGCATAGA+GGG - chr8_1:76560918-76560937 Msa1215320:intron 55.0%
TCGGCCTCACCATTGCAAGA+AGG + chr8_1:76561544-76561563 None:intergenic 55.0%
GGTTGCCTCATGATTGGCAC+AGG - chr8_1:76562119-76562138 Msa1215320:CDS 55.0%
AGCATCAAAGAGGGGAGGAG+GGG + chr8_1:76562446-76562465 None:intergenic 55.0%
ATGGAGCGAAAGGGGTGGGA+TGG - chr8_1:76557923-76557942 Msa1215320:three_prime_UTR 60.0%
TGGAGCGAAAGGGGTGGGAT+GGG - chr8_1:76557924-76557943 Msa1215320:three_prime_UTR 60.0%
CGGCTGAGATTCAGAGTGGG+AGG + chr8_1:76558044-76558063 None:intergenic 60.0%
GCCAAGTGGGGACATGGTTG+TGG + chr8_1:76558177-76558196 None:intergenic 60.0%
AACTCGGCCAAGTGGGGACA+TGG + chr8_1:76558183-76558202 None:intergenic 60.0%
GGAGGCAGTTATGGAGGGAG+AGG + chr8_1:76558230-76558249 None:intergenic 60.0%
TGCCTCCGGATCAAACCTCC+CGG - chr8_1:76558243-76558262 Msa1215320:three_prime_UTR 60.0%
TTCGTGAGGATCACGGCGGA+GGG + chr8_1:76558280-76558299 None:intergenic 60.0%
TTTCGTGAGGATCACGGCGG+AGG + chr8_1:76558281-76558300 None:intergenic 60.0%
ATGCAGGCATAGAGGCGGGA+AGG + chr8_1:76558336-76558355 None:intergenic 60.0%
TACAGCGGCGCATGAGATGC+AGG + chr8_1:76558352-76558371 None:intergenic 60.0%
GTGAGAAATGACACCGGCGG+TGG + chr8_1:76558388-76558407 None:intergenic 60.0%
GGCGTGAGAAATGACACCGG+CGG + chr8_1:76558391-76558410 None:intergenic 60.0%
GGCGGCGTGAGAAATGACAC+CGG + chr8_1:76558394-76558413 None:intergenic 60.0%
CATTGATGCGGCATGTGCGG+CGG + chr8_1:76558412-76558431 None:intergenic 60.0%
CTGCTGCGTTTGCCGTGATC+AGG - chr8_1:76558479-76558498 Msa1215320:three_prime_UTR 60.0%
GGTCTGTGCGATCACGACTG+CGG + chr8_1:76558526-76558545 None:intergenic 60.0%
! GTCGCCGATTGTGGACGCAA+CGG + chr8_1:76558547-76558566 None:intergenic 60.0%
GTTGCGTCCACAATCGGCGA+CGG - chr8_1:76558546-76558565 Msa1215320:three_prime_UTR 60.0%
AGAGCGCGTTCGCGTAGATC+CGG + chr8_1:76558660-76558679 None:intergenic 60.0%
CTACGCGAACGCGCTCTGAT+CGG - chr8_1:76558663-76558682 Msa1215320:CDS 60.0%
CTGATTTCCCGCGGGGATTG+CGG - chr8_1:76558712-76558731 Msa1215320:CDS 60.0%
TGATTTCCCGCGGGGATTGC+GGG - chr8_1:76558713-76558732 Msa1215320:CDS 60.0%
GCGAAAGGGGTGGGATGGGA+TGG - chr8_1:76557928-76557947 Msa1215320:three_prime_UTR 65.0%
GGTGGAAGAGCGGCGGAACT+CGG + chr8_1:76558199-76558218 None:intergenic 65.0%
CTCCGGATCAAACCTCCCGG+CGG - chr8_1:76558246-76558265 Msa1215320:three_prime_UTR 65.0%
! AGACCGCAGGCGTTGCAGTG+AGG + chr8_1:76558306-76558325 None:intergenic 65.0%
GGAAGGAGCAGAGAGACCGC+AGG + chr8_1:76558319-76558338 None:intergenic 65.0%
! TCTCAGAAAGCGGCGCCGAG+TGG - chr8_1:76558617-76558636 Msa1215320:CDS 65.0%
CGCAATCCCCGCGGGAAATC+AGG + chr8_1:76558714-76558733 None:intergenic 65.0%
GATTTCCCGCGGGGATTGCG+GGG - chr8_1:76558714-76558733 Msa1215320:CDS 65.0%
ATTTCCCGCGGGGATTGCGG+GGG - chr8_1:76558715-76558734 Msa1215320:CDS 65.0%
TTCAACCCCCGCAATCCCCG+CGG + chr8_1:76558723-76558742 None:intergenic 65.0%
CGGCGGAACTCGGCCAAGTG+GGG + chr8_1:76558189-76558208 None:intergenic 70.0%
GCGGCGGAACTCGGCCAAGT+GGG + chr8_1:76558190-76558209 None:intergenic 70.0%
AGCGGCGGAACTCGGCCAAG+TGG + chr8_1:76558191-76558210 None:intergenic 70.0%
CGCCGGGAGGTTTGATCCGG+AGG + chr8_1:76558248-76558267 None:intergenic 70.0%
GGCCGCCGGGAGGTTTGATC+CGG + chr8_1:76558251-76558270 None:intergenic 70.0%
GTGAGGATCACGGCGGAGGG+AGG + chr8_1:76558277-76558296 None:intergenic 70.0%
TCAACCCCCGCAATCCCCGC+GGG + chr8_1:76558722-76558741 None:intergenic 70.0%
GATCACGGCGGAGGGAGGCG+CGG + chr8_1:76558272-76558291 None:intergenic 75.0%
!! AGGGAGGCGCGGCCGCCGGG+AGG + chr8_1:76558261-76558280 None:intergenic 90.0%
!! CGGAGGGAGGCGCGGCCGCC+GGG + chr8_1:76558264-76558283 None:intergenic 90.0%
!! GCGGAGGGAGGCGCGGCCGC+CGG + chr8_1:76558265-76558284 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76557917 76562805 76557917 ID=Msa1215320;Name=Msa1215320
chr8_1 mRNA 76557917 76562805 76557917 ID=Msa1215320-mRNA-1;Parent=Msa1215320;Name=Msa1215320-mRNA-1;_AED=0.08;_eAED=0.08;_QI=227|0.4|0.66|1|0.8|0.66|6|494|670
chr8_1 exon 76557917 76557978 76557917 ID=Msa1215320-mRNA-1:exon:26297;Parent=Msa1215320-mRNA-1
chr8_1 exon 76558159 76559351 76558159 ID=Msa1215320-mRNA-1:exon:26296;Parent=Msa1215320-mRNA-1
chr8_1 exon 76559775 76559883 76559775 ID=Msa1215320-mRNA-1:exon:26295;Parent=Msa1215320-mRNA-1
chr8_1 exon 76560215 76560328 76560215 ID=Msa1215320-mRNA-1:exon:26294;Parent=Msa1215320-mRNA-1
chr8_1 exon 76561301 76561436 76561301 ID=Msa1215320-mRNA-1:exon:26293;Parent=Msa1215320-mRNA-1
chr8_1 exon 76561686 76562805 76561686 ID=Msa1215320-mRNA-1:exon:26292;Parent=Msa1215320-mRNA-1
chr8_1 five_prime_UTR 76562579 76562805 76562579 ID=Msa1215320-mRNA-1:five_prime_utr;Parent=Msa1215320-mRNA-1
chr8_1 CDS 76561686 76562578 76561686 ID=Msa1215320-mRNA-1:cds;Parent=Msa1215320-mRNA-1
chr8_1 CDS 76561301 76561436 76561301 ID=Msa1215320-mRNA-1:cds;Parent=Msa1215320-mRNA-1
chr8_1 CDS 76560215 76560328 76560215 ID=Msa1215320-mRNA-1:cds;Parent=Msa1215320-mRNA-1
chr8_1 CDS 76559775 76559883 76559775 ID=Msa1215320-mRNA-1:cds;Parent=Msa1215320-mRNA-1
chr8_1 CDS 76558591 76559351 76558591 ID=Msa1215320-mRNA-1:cds;Parent=Msa1215320-mRNA-1
chr8_1 three_prime_UTR 76558159 76558590 76558159 ID=Msa1215320-mRNA-1:three_prime_utr;Parent=Msa1215320-mRNA-1
chr8_1 three_prime_UTR 76557917 76557978 76557917 ID=Msa1215320-mRNA-1:three_prime_utr;Parent=Msa1215320-mRNA-1
Gene Sequence

>Msa1215320

ATGTCCTCCAAAATCAACGGTCAGATTTCACCACAACCATGTCCCCACTTGGCCGAGTTCCGCCGCTCTTCCACCAAACCATTCCTCTCCCTCCATAACTGCCTCCGGATCAAACCTCCCGGCGGCCGCGCCTCCCTCCGCCGTGATCCTCACGAAATTCCTCACTGCAACGCCTGCGGTCTCTCTGCTCCTTCCCGCCTCTATGCCTGCATCTCATGCGCCGCTGTATCATGTCACTCTTCCACCGCCGGTGTCATTTCTCACGCCGCCGCACATGCCGCATCAATGTCTCCTGGTCATCAGATCGCAATCGACGTCGATCGTGCCGAGCTTTTCTGCTGCGTTTGCCGTGATCAGGTTTACGATCGTGATTTCGACGCCGCAGTCGTGATCGCACAGACCGTTGCGTCCACAATCGGCGACGGAGAAAAATCAACAGTGATCCCTATGTCATCTACTCCGCATCCGGAGAATCTCAGAAAGCGGCGCCGAGTGGATTACCGTCCTTCAACTCCGGATCTACGCGAACGCGCTCTGATCGGAAGTTGTTCTTCTCCGATCAACGTTCCTGATTTCCCGCGGGGATTGCGGGGGTTGAACAATCTCGGAAACACTTGTTTCATGAATTCGGTGTTGCAGGCTTTGTTTCACACGCCACCGTTGAGAAATTACTTCCTGAGTGATAAGCATAATCGGTACTTTTGCCAGAAAATGAGCAATGCTGATGATGCCGCAAATGGTGATGATTCTGCCATAGCAACTGCGAAAAGAAATGGAGAGAACAATGGAACAAAAAATGGACGATTATGCTTAGCTTGTGATATGGATGCTATGTTCTCTGCTGTTTTTTCGGGAGACCGTCTTCCCTATAGCCCAGCAAAGTTCTTGTACAGTTGGTGGCAGCATGCAGCCAAGTCCAACCTTGCAAGCTATGAACAACAGGATGCACATGAATTTTTCATTTCAATGCTTGATGGGATCCATGAAAAGGTGGACAAGGATCGACGTAAGCCACACAATGAAGGTAATGGCGAGGGTTTAGGTCTCTTGCTTGTTGCCCTAGGAGTTGACATTGATCAGACAGTTAGTGCTTATTCTCAATCACACCTGTGCTATCTCGATGGTGTTAGCGGCTACCTTCCTTTCCTTGTCCTCCTTAATCTCAATCAGAAGCCCATAATTAGGACCCTGTTTGTTCCAGAATCAGTTCAGAATGTGTTTTGGACTGCACTCCTGCATAGAGGGAGTATGGGCAGCGATTGTTGTATTGCTCATAGGGTATTCTCTGGTATTTTGCGGTCAGATGTTATGTGTATGGCCTGTGGTTTCACATCAACAACTTATGACCCATGCGTAGACATCTCACTTGACTTGGAACCAAATCAAGGGGGTTCTACTAAGATGGCTGCTGCAGCTTCCAATCCTTCTTGCAATGGTGAGGCCGATTCCAGCCAAAACTTTGGGATATCTACCTTGATGGGGTGCTTGGATAGATTTACAAGAGCAGAGAAATTGGGGTCAAACCAGAAGTTTTTCTGTCAGCAGTGTAAGGTGAAGCAGGAAACTCTCAAGCAGATGTCCATAAGGAAGCTTCCCCTTGTTTCTTGCTTCCATATAAAAAGATTTGAGCACTCTTCAAGAAAAAAAATGTCAAGGAAGGTGGACCGTTATTTGCAGTTCCCATTCTCACTGGACATGTCACCTTATCTCTCATCCTCAATCTTAAGGAGTCGGTTTGGTAACAGAATATTTCCTTTTGATGGGGATGAGCCTGATGCTTCAAATGATCTTTGTTCTGAGTTTGAATTGTTTGCTGTCGTCACTCACTCTGGTAAGTTAGATGCTGGTCATTATGTGACATATCTGCGATTAAGCAATCAATGGTACAAGTGTGATGATTCTTGGGTTACTCAAGTTGATGAAAACATTGTGAGGGCTGCTCAGGGTTATATGATGTTCTATGTACAGAAGATGCTTTACTATAAAGCAACTGATAAATCGGTTGCCTCATGA
Protein sequence

>Msa1215320

MSSKINGQISPQPCPHLAEFRRSSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACGLSAPSRLYACISCAAVSCHSSTAGVISHAAAHAASMSPGHQIAIDVDRAELFCCVCRDQVYDRDFDAAVVIAQTVASTIGDGEKSTVIPMSSTPHPENLRKRRRVDYRPSTPDLRERALIGSCSSPINVPDFPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDKHNRYFCQKMSNADDAANGDDSAIATAKRNGENNGTKNGRLCLACDMDAMFSAVFSGDRLPYSPAKFLYSWWQHAAKSNLASYEQQDAHEFFISMLDGIHEKVDKDRRKPHNEGNGEGLGLLLVALGVDIDQTVSAYSQSHLCYLDGVSGYLPFLVLLNLNQKPIIRTLFVPESVQNVFWTALLHRGSMGSDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQGGSTKMAAAASNPSCNGEADSSQNFGISTLMGCLDRFTRAEKLGSNQKFFCQQCKVKQETLKQMSIRKLPLVSCFHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPDASNDLCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMMFYVQKMLYYKATDKSVAS*