AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215570 MtrunA17_Chr4g0064681 97.093 344 10 0 1 344 1 344 0.0 699
Msa1215570 MtrunA17_Chr4g0064671 99.602 251 1 0 420 670 9 259 0.0 526
Msa1215570 MtrunA17_Chr1g0149991 63.347 251 74 4 418 665 298 533 1.70e-100 318
Msa1215570 MtrunA17_Chr1g0149991 39.429 350 135 11 10 344 11 298 6.26e-65 224
Msa1215570 MtrunA17_Chr3g0123951 25.673 483 203 15 191 654 15 360 2.19e-29 120
Msa1215570 MtrunA17_Chr4g0074041 33.193 238 102 9 423 656 211 395 2.70e-27 118
Msa1215570 MtrunA17_Chr6g0458441 30.290 241 112 7 423 661 244 430 6.81e-27 116
Msa1215570 MtrunA17_Chr8g0382161 25.311 482 204 16 192 654 16 360 4.74e-26 110
Msa1215570 MtrunA17_Chr6g0458421 29.536 237 111 6 423 657 146 328 1.73e-25 111
Msa1215570 MtrunA17_Chr5g0411271 27.848 237 119 7 423 657 264 450 4.35e-25 110
Msa1215570 MtrunA17_Chr3g0133061 29.268 246 118 6 415 656 695 888 2.57e-24 108
Msa1215570 MtrunA17_Chr6g0458431 29.114 237 112 6 423 657 211 393 3.54e-24 107
Msa1215570 MtrunA17_Chr8g0366721 27.823 248 127 6 412 657 302 499 4.23e-24 107
Msa1215570 MtrunA17_Chr5g0427301 28.205 234 111 7 427 656 665 845 1.30e-20 97.1
Msa1215570 MtrunA17_Chr1g0150541 27.119 236 116 7 423 654 301 484 5.94e-19 91.7
Msa1215570 MtrunA17_Chr7g0255591 28.144 167 95 4 491 654 754 898 6.47e-19 91.7
Msa1215570 MtrunA17_Chr5g0412381 26.068 234 117 5 427 656 545 726 8.14e-19 91.3
Msa1215570 MtrunA17_Chr1g0189101 31.737 167 88 5 491 654 765 908 2.49e-18 89.7
Msa1215570 MtrunA17_Chr1g0189101 33.333 147 70 3 195 341 318 436 2.38e-14 77.0
Msa1215570 MtrunA17_Chr2g0312901 26.496 234 118 5 423 654 145 326 2.66e-18 89.4
Msa1215570 MtrunA17_Chr8g0365831 28.333 240 113 10 426 657 277 465 7.43e-16 80.9
Msa1215570 MtrunA17_Chr2g0313171 25.207 242 123 7 420 656 581 769 8.85e-16 81.6
Msa1215570 MtrunA17_Chr2g0322211 26.506 166 97 4 491 654 717 859 9.94e-16 81.3
Msa1215570 MtrunA17_Chr2g0322211 30.719 153 77 4 195 346 269 393 1.69e-11 67.8
Msa1215570 MtrunA17_Chr1g0170261 27.111 225 108 7 425 642 309 484 5.91e-15 79.0
Msa1215570 MtrunA17_Chr7g0267641 26.667 180 108 5 491 668 791 948 2.12e-14 77.0
Msa1215570 MtrunA17_Chr7g0267641 31.973 147 72 3 195 341 334 452 5.55e-13 72.4
Msa1215570 MtrunA17_Chr4g0062561 30.464 151 77 5 509 657 729 853 2.06e-13 73.9
Msa1215570 MtrunA17_Chr5g0439971 25.561 223 110 7 425 640 312 485 1.50e-12 71.2
Msa1215570 MtrunA17_Chr4g0062491 26.190 168 96 5 496 657 149 294 3.09e-12 68.2
Msa1215570 MtrunA17_Chr3g0119031 25.561 223 110 7 425 640 307 480 9.83e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215570 AT5G10790.2 56.327 245 99 3 422 663 169 408 1.44e-78 257
Msa1215570 AT5G10790.2 55.556 144 36 2 192 335 43 158 8.68e-44 163
Msa1215570 AT5G10790.1 56.327 245 99 3 422 663 298 537 8.46e-77 256
Msa1215570 AT5G10790.1 41.642 341 139 11 1 335 1 287 5.30e-71 241
Msa1215570 AT4G39910.1 24.845 483 209 17 192 654 16 364 3.32e-29 120
Msa1215570 AT5G57990.1 32.068 237 105 8 423 656 226 409 6.17e-27 117
Msa1215570 AT4G17895.1 28.390 236 116 6 424 657 292 476 6.74e-24 107
Msa1215570 AT2G22310.1 24.516 465 206 13 192 649 16 342 2.10e-23 102
Msa1215570 AT4G24560.1 26.792 265 136 5 398 656 634 846 8.27e-23 104
Msa1215570 AT5G46740.1 29.675 246 119 8 415 657 275 469 1.40e-21 100
Msa1215570 AT5G46740.2 29.675 246 119 8 415 657 66 260 1.60e-21 99.4
Msa1215570 AT2G22310.3 26.693 251 132 4 400 649 111 310 3.95e-21 95.5
Msa1215570 AT2G22310.2 26.693 251 132 4 400 649 106 305 3.99e-21 95.5
Msa1215570 AT2G40930.1 27.488 211 126 6 452 657 728 916 2.31e-20 96.7
Msa1215570 AT2G40930.1 31.034 145 72 3 195 339 315 431 3.61e-12 70.5
Msa1215570 AT2G40930.2 27.488 211 126 6 452 657 728 916 2.31e-20 96.7
Msa1215570 AT2G40930.2 31.034 145 72 3 195 339 315 431 3.61e-12 70.5
Msa1215570 AT4G10590.4 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215570 AT4G10590.4 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215570 AT4G10590.3 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215570 AT4G10590.3 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215570 AT4G10590.1 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215570 AT4G10590.1 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215570 AT4G10590.2 32.934 167 86 4 491 654 748 891 2.05e-19 93.6
Msa1215570 AT4G10590.2 34.694 147 68 4 195 341 301 419 8.18e-14 75.5
Msa1215570 AT4G10570.1 32.934 167 86 4 491 654 749 892 6.48e-19 92.0
Msa1215570 AT4G10570.1 34.694 147 68 4 195 341 302 420 7.06e-14 75.9
Msa1215570 AT4G31670.1 24.576 236 122 6 423 654 288 471 1.24e-18 90.5
Msa1215570 AT5G65450.1 26.538 260 136 6 401 656 424 632 2.91e-18 89.7
Msa1215570 AT5G65450.2 26.538 260 136 6 401 656 443 651 2.93e-18 89.7
Msa1215570 AT2G24640.2 26.724 232 114 7 427 654 128 307 3.64e-18 88.6
Msa1215570 AT2G24640.1 26.271 236 118 7 423 654 294 477 6.92e-18 88.2
Msa1215570 AT5G22030.1 27.711 166 96 4 491 654 723 866 1.31e-17 87.8
Msa1215570 AT3G14400.1 26.068 234 119 5 423 654 151 332 1.62e-17 87.0
Msa1215570 AT5G22030.2 27.711 166 96 4 491 654 765 908 1.66e-17 87.4
Msa1215570 AT1G17110.3 25.207 242 123 7 420 656 555 743 1.79e-17 87.4
Msa1215570 AT1G17110.1 25.207 242 123 7 420 656 555 743 1.79e-17 87.4
Msa1215570 AT1G17110.2 25.207 242 123 7 420 656 559 747 1.94e-17 87.4
Msa1215570 AT1G32850.1 30.508 177 96 5 481 654 725 877 1.53e-15 81.3
Msa1215570 AT1G32850.1 32.886 149 72 3 194 342 298 418 5.74e-14 76.3
Msa1215570 AT5G06600.2 25.541 231 114 8 425 648 306 485 1.42e-11 68.6
Msa1215570 AT5G06600.1 25.541 231 114 8 425 648 307 486 1.45e-11 68.6
Msa1215570 AT3G11910.3 25.110 227 120 8 425 648 306 485 1.53e-11 68.6
Msa1215570 AT3G11910.1 25.110 227 120 8 425 648 306 485 1.53e-11 68.6
Msa1215570 AT3G11910.4 25.110 227 120 8 425 648 305 484 1.54e-11 68.6
Msa1215570 AT3G11910.2 25.110 227 120 8 425 648 305 484 1.54e-11 68.6
Msa1215570 AT5G06600.3 25.541 231 114 8 425 648 307 486 1.78e-11 68.2

Find 224 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTAGGCACTCCAACTTTC+TGG 0.152570 8_1:-76857135 Msa1215570:three_prime_UTR
AACAAACAGGGTCCTAATTA+TGG 0.209770 8_1:+76858616 None:intergenic
TGGGCTTCTGATTGAGATTA+AGG 0.213980 8_1:+76858636 None:intergenic
TGAAATCTGACCGTTGATTT+TGG 0.232505 8_1:+76861335 None:intergenic
AACACATTCTGAACTGATTC+TGG 0.251190 8_1:+76858593 None:intergenic
GCGGAGGGAGGCGCGGCCGC+CGG 0.262389 8_1:+76861224 None:intergenic
ATTTACAAGAGCAGAGAAAT+TGG 0.276376 8_1:-76857874 Msa1215570:CDS
AAGTTAGATTTCAAGGTCTT+TGG 0.281816 8_1:+76861409 None:intergenic
CGGAGGGAGGCGCGGCCGCC+GGG 0.289815 8_1:+76861225 None:intergenic
TTTCATGAATTCGGTGTTGC+AGG 0.290893 8_1:-76860725 Msa1215570:CDS
GACATTAAATGCCAATGATT+TGG 0.291008 8_1:+76857337 None:intergenic
ACTCCTGCATAGAGGGAGTA+TGG 0.307132 8_1:-76858561 Msa1215570:CDS
CAAGAACTTTGCTGGGCTAT+AGG 0.310468 8_1:+76860477 None:intergenic
TCAATCAGAAGCCCATAATT+AGG 0.315067 8_1:-76858628 Msa1215570:CDS
AATCAGTTCAGAATGTGTTT+TGG 0.329675 8_1:-76858589 Msa1215570:CDS
AAACACTTGTTTCATGAATT+CGG 0.335765 8_1:-76860734 Msa1215570:CDS
GCGATTGTTGTATTGCTCAT+AGG 0.342061 8_1:-76858112 Msa1215570:CDS
CTTTGGGATATCTACCTTGA+TGG 0.355939 8_1:-76857910 Msa1215570:CDS
GAAATGCAGGGCGAGGGTTT+AGG 0.356585 8_1:-76859101 Msa1215570:intron
CTGCTGCGTTTGCCGTGATC+AGG 0.363132 8_1:-76861007 Msa1215570:CDS
CTTTGATGCTTTGAAAATCA+AGG 0.366229 8_1:-76857030 Msa1215570:three_prime_UTR
CTATAAAGCAACTGATAAAT+CGG 0.367733 8_1:-76857388 Msa1215570:CDS
ATTATGCTTAGCTTGTGATA+TGG 0.369132 8_1:-76860539 Msa1215570:CDS
CACCTGTACAAGAACTTTGC+TGG 0.372135 8_1:+76860469 None:intergenic
ATCTCTCATCCTCAATCTTA+AGG 0.377114 8_1:-76857662 Msa1215570:CDS
AACAAGGGGAAGCTTCCTTA+TGG 0.382446 8_1:+76857788 None:intergenic
TTTACAAGAGCAGAGAAATT+GGG 0.384632 8_1:-76857873 Msa1215570:CDS
GGTACAAGTGTGATGATTCT+TGG 0.387459 8_1:-76857485 Msa1215570:CDS
GTTTGATCCGGAGGCAGTTA+TGG 0.388383 8_1:+76861250 None:intergenic
AGGTAGATATCCCAAAGTTT+TGG 0.392594 8_1:+76857916 None:intergenic
ATAGCTTGCAAGGTTGGACT+TGG 0.397326 8_1:+76860183 None:intergenic
CCGATTCCAGCCAAAACTTT+GGG 0.398387 8_1:-76857926 Msa1215570:CDS
AAACATTGTGAGGGCTGCTC+AGG 0.399967 8_1:-76857445 Msa1215570:CDS
ATCTACCTTGATGGGGTGCT+TGG 0.401605 8_1:-76857901 Msa1215570:CDS
GCCGATTCCAGCCAAAACTT+TGG 0.412364 8_1:-76857927 Msa1215570:CDS
GGTCTCTTGCTTGTTGCCCT+AGG 0.414334 8_1:-76859080 Msa1215570:CDS
AAGAACTTTGCTGGGCTATA+GGG 0.417867 8_1:+76860478 None:intergenic
CATAGATCATTTGAAGCATC+AGG 0.419831 8_1:+76857597 None:intergenic
AGAAGTCATGGCATATCGTT+AGG 0.424302 8_1:+76857293 None:intergenic
TATGGATTCCTTATAATTTG+TGG 0.426265 8_1:-76857101 Msa1215570:three_prime_UTR
GCGGTCAGATGTTATGTGTA+TGG 0.427526 8_1:-76858072 Msa1215570:CDS
CCCTCAAGTTTCCAGAAAGT+TGG 0.428158 8_1:+76857124 None:intergenic
TTTCTGGAAACTTGAGGGTA+TGG 0.431385 8_1:-76857119 Msa1215570:three_prime_UTR
GATAGTAAAGTTAGATTTCA+AGG 0.439060 8_1:+76861402 None:intergenic
GCGAAAGAGGTGGGATGGGA+TGG 0.439510 8_1:-76861558 Msa1215570:five_prime_UTR
TCCTGAGTGATAAGCATAAT+CGG 0.439582 8_1:-76860669 Msa1215570:CDS
ACAAACAGGGTCCTAATTAT+GGG 0.446938 8_1:+76858617 None:intergenic
ATAGCAACTGCGAAAAGAAA+TGG 0.452606 8_1:-76860589 Msa1215570:CDS
CCTTGCAAGCTATGAACAAC+AGG 0.455682 8_1:-76860173 Msa1215570:CDS
CTCTCAAGCAGATGTCCATA+AGG 0.460815 8_1:-76857803 Msa1215570:CDS
AGATTCAGAGTGGGAGGGAA+TGG 0.462664 8_1:+76861451 None:intergenic
GAACTGATTCTGGAACAAAC+AGG 0.466432 8_1:+76858603 None:intergenic
CATGTGATGGTCCAAATCAT+TGG 0.468072 8_1:-76857348 Msa1215570:three_prime_UTR
TTGTTCATAGCTTGCAAGGT+TGG 0.469502 8_1:+76860177 None:intergenic
GCCAAGTGGGGACATGGTTG+TGG 0.470459 8_1:+76861312 None:intergenic
TCTGATCAATGTCAACTCCT+AGG 0.472459 8_1:+76859063 None:intergenic
TGCTATCTCGATGGTGTTAG+CGG 0.473047 8_1:-76859011 Msa1215570:CDS
AATATAAATACAAATAAAGT+AGG 0.473412 8_1:+76856973 None:intergenic
ATGGAGGGAGAGGAATGGTT+TGG 0.473439 8_1:+76861269 None:intergenic
ATCATTGGCATTTAATGTCA+TGG 0.475216 8_1:-76857333 Msa1215570:three_prime_UTR
TATGTCATCTACTCCGCATC+CGG 0.477988 8_1:-76860896 Msa1215570:CDS
CGATTGTTGTATTGCTCATA+GGG 0.478514 8_1:-76858111 Msa1215570:CDS
GGTGACATGTCCAGTGAGAA+TGG 0.480165 8_1:+76857687 None:intergenic
CAGACCGTTGCGTCCACAAT+CGG 0.485001 8_1:-76860946 Msa1215570:CDS
TTTGGGATATCTACCTTGAT+GGG 0.487341 8_1:-76857909 Msa1215570:CDS
CCAACTTTCTGGAAACTTGA+GGG 0.489263 8_1:-76857124 Msa1215570:three_prime_UTR
GGGCTGCGCTTCACTCAATA+TGG 0.489978 8_1:+76861501 None:intergenic
CTTGACTTGGAACCAAATCA+AGG 0.491810 8_1:-76858002 Msa1215570:CDS
TACAGCGGCGCATGAGATGC+AGG 0.492370 8_1:+76861137 None:intergenic
CGTAGACATCTCACTTGACT+TGG 0.493660 8_1:-76858015 Msa1215570:CDS
TCAATCTTAAGGAGTCGGTT+TGG 0.493910 8_1:-76857651 Msa1215570:CDS
GATCACGGCGGAGGGAGGCG+CGG 0.494606 8_1:+76861217 None:intergenic
TTCAGAGTGGGAGGGAATGG+AGG 0.494827 8_1:+76861454 None:intergenic
TTTGCAGTTCCCATTCTCAC+TGG 0.494834 8_1:-76857697 Msa1215570:CDS
GGCAGAATCATCACCATTTG+CGG 0.495711 8_1:+76860612 None:intergenic
ATGGAGCGAAAGAGGTGGGA+TGG 0.497361 8_1:-76861563 Msa1215570:five_prime_UTR
AAAGCATCAAAGAGGGGAGG+AGG 0.498976 8_1:+76857041 None:intergenic
GAGAGTTAATACTTTCATGT+TGG 0.499971 8_1:-76857181 Msa1215570:three_prime_UTR
AGGAAAATAGAAGTGTTGAT+TGG 0.500199 8_1:+76856742 None:intergenic
AGAGCGCGTTCGCGTAGATC+CGG 0.505738 8_1:+76860829 None:intergenic
TAAATCGGTTGCCTCATGAT+TGG 0.507887 8_1:-76857373 Msa1215570:exon
CTCACCATTGCAAGAAGGAT+TGG 0.509379 8_1:+76857950 None:intergenic
GAGGGAGAGGAATGGTTTGG+TGG 0.509621 8_1:+76861272 None:intergenic
CGACGCTTTCTGAGATTCTC+CGG 0.509875 8_1:+76860877 None:intergenic
TTTCGTGAGGATCACGGCGG+AGG 0.510267 8_1:+76861208 None:intergenic
GGATGGAAGAGAGTAAAAGT+AGG 0.512354 8_1:-76861541 Msa1215570:five_prime_UTR
AACTCGGCCAAGTGGGGACA+TGG 0.512760 8_1:+76861306 None:intergenic
CACTCTGGTAAGTTAGATGC+TGG 0.512954 8_1:-76857543 Msa1215570:CDS
TCAGGCTCATCCCCATCAAA+AGG 0.513022 8_1:+76857615 None:intergenic
CCTGTTGTTCATAGCTTGCA+AGG 0.514285 8_1:+76860173 None:intergenic
CGGTGATTTGATAATGTGAA+TGG 0.515858 8_1:+76861367 None:intergenic
GTACAAGTGTGATGATTCTT+GGG 0.516165 8_1:-76857484 Msa1215570:CDS
ACCACAACCATGTCCCCACT+TGG 0.519117 8_1:-76861313 Msa1215570:CDS
ATTGCTCATAGGGTATTCTC+TGG 0.521986 8_1:-76858101 Msa1215570:CDS
CAGTTATGGAGGGAGAGGAA+TGG 0.523524 8_1:+76861264 None:intergenic
TCTCCCTCCATAACTGCCTC+CGG 0.524014 8_1:-76861257 Msa1215570:CDS
TTTCTGAGATTCTCCGGATG+CGG 0.524348 8_1:+76860883 None:intergenic
GCCCAGCAAAGTTCTTGTAC+AGG 0.529287 8_1:-76860471 Msa1215570:intron
TACCCATACTCCCTCTATGC+AGG 0.531084 8_1:+76858558 None:intergenic
GTGACATGTCCAGTGAGAAT+GGG 0.531399 8_1:+76857688 None:intergenic
TCAGCAGTGTAAGGTGAAGC+AGG 0.532735 8_1:-76857829 Msa1215570:CDS
GGTGGAAGAGCGGCGGAACT+CGG 0.533556 8_1:+76861290 None:intergenic
TCGCGTAGATCCGGAGTTGA+AGG 0.536635 8_1:+76860838 None:intergenic
AGATTTCAAGGTCTTTGGAT+CGG 0.538069 8_1:+76861414 None:intergenic
AGGGAGGCGCGGCCGCCGGG+AGG 0.538738 8_1:+76861228 None:intergenic
TTTGCTGTCGTCACTCACTC+TGG 0.539742 8_1:-76857558 Msa1215570:CDS
AACATTGAAATGCAGGGCGA+GGG 0.539768 8_1:-76859107 Msa1215570:intron
CATCCTCAATCTTAAGGAGT+CGG 0.541711 8_1:-76857656 Msa1215570:CDS
GCTTCCAATCCTTCTTGCAA+TGG 0.542195 8_1:-76857954 Msa1215570:CDS
CAACGTTCCTGATTTCCCGC+GGG 0.545113 8_1:-76860782 Msa1215570:CDS
CTACGCGAACGCGCTCTGAT+CGG 0.545145 8_1:-76860823 Msa1215570:CDS
TGGAGCGAAAGAGGTGGGAT+GGG 0.546265 8_1:-76861562 Msa1215570:five_prime_UTR
GGACTGCACTCCTGCATAGA+GGG 0.546844 8_1:-76858568 Msa1215570:CDS
CGACGTAAGCCACACAATGA+AGG 0.547420 8_1:-76860091 Msa1215570:CDS
GCGGCGGAACTCGGCCAAGT+GGG 0.547829 8_1:+76861299 None:intergenic
ACCTGTACAAGAACTTTGCT+GGG 0.547919 8_1:+76860470 None:intergenic
CGCATGAGATGCAGGCATAG+AGG 0.550847 8_1:+76861145 None:intergenic
AAGCATCAAAGAGGGGAGGA+GGG 0.551004 8_1:+76857042 None:intergenic
AGCATCAAAGAGGGGAGGAG+GGG 0.551266 8_1:+76857043 None:intergenic
CTCATGATTGGCACATGTGA+TGG 0.553021 8_1:-76857361 Msa1215570:exon
TCATGTCACTCTTCCACCGC+CGG 0.554123 8_1:-76861114 Msa1215570:CDS
GGGAAATCAGGAACGTTGAT+CGG 0.554225 8_1:+76860787 None:intergenic
AATACATTACCTTCATTGTG+TGG 0.554718 8_1:+76860082 None:intergenic
AAATATGGAGCGAAAGAGGT+GGG 0.554776 8_1:-76861567 Msa1215570:five_prime_UTR
GGAAGGAGCAGAGAGACCGC+AGG 0.555638 8_1:+76861170 None:intergenic
GGATTACCGTCCTTCAACTC+CGG 0.556868 8_1:-76860848 Msa1215570:CDS
TCCAACTTTCTGGAAACTTG+AGG 0.558593 8_1:-76857125 Msa1215570:three_prime_UTR
AAACCGACTCCTTAAGATTG+AGG 0.558602 8_1:+76857653 None:intergenic
TGGACTGCACTCCTGCATAG+AGG 0.559071 8_1:-76858569 Msa1215570:CDS
AATGCTGATGATGCCGCAAA+TGG 0.559230 8_1:-76860625 Msa1215570:CDS
CAATCCTTCTTGCAATGGTG+AGG 0.559381 8_1:-76857949 Msa1215570:CDS
CTGATCAATGTCAACTCCTA+GGG 0.561003 8_1:+76859064 None:intergenic
CTCCTGCATAGAGGGAGTAT+GGG 0.561694 8_1:-76858560 Msa1215570:intron
AGAATGGGAACTGCAAATAA+CGG 0.566367 8_1:+76857703 None:intergenic
ATGAGATGCAGGCATAGAGG+CGG 0.566788 8_1:+76861148 None:intergenic
GTGAGGATCACGGCGGAGGG+AGG 0.567687 8_1:+76861212 None:intergenic
CATTGATGCGGCATGTGCGG+CGG 0.567934 8_1:+76861077 None:intergenic
GGATGCGGAGTAGATGACAT+AGG 0.568578 8_1:+76860898 None:intergenic
CGGCTGAGATTCAGAGTGGG+AGG 0.569818 8_1:+76861445 None:intergenic
CAACTATTATCAAGATTCGA+GGG 0.569941 8_1:+76857070 None:intergenic
ATGTGAATGGATCGAATGGA+TGG 0.571689 8_1:+76861380 None:intergenic
TGAGATGCAGGCATAGAGGC+GGG 0.572369 8_1:+76861149 None:intergenic
ACAACTATTATCAAGATTCG+AGG 0.573337 8_1:+76857069 None:intergenic
ACCGATTATGCTTATCACTC+AGG 0.573589 8_1:+76860668 None:intergenic
ATCTGCGATTAAGCAATCAA+TGG 0.573921 8_1:-76857506 Msa1215570:CDS
TTATATGGAAGCAAGAAACA+AGG 0.575945 8_1:+76857772 None:intergenic
GGAGGCAGTTATGGAGGGAG+AGG 0.576687 8_1:+76861259 None:intergenic
TGATCCGGAGGCAGTTATGG+AGG 0.576751 8_1:+76861253 None:intergenic
TTCGTGAGGATCACGGCGGA+GGG 0.577779 8_1:+76861209 None:intergenic
GTGAGAAATGACACCGGCGG+TGG 0.578310 8_1:+76861101 None:intergenic
AAGATTGAGGATGAGAGATA+AGG 0.583138 8_1:+76857666 None:intergenic
TTACAAGAGCAGAGAAATTG+GGG 0.584043 8_1:-76857872 Msa1215570:CDS
TCAAGTGAGATGTCTACGCA+TGG 0.585086 8_1:+76858020 None:intergenic
AGACATTGATGCGGCATGTG+CGG 0.585359 8_1:+76861074 None:intergenic
TCAACGTTCCTGATTTCCCG+CGG 0.585556 8_1:-76860783 Msa1215570:CDS
TCTATCCAAGCACCCCATCA+AGG 0.586315 8_1:+76857896 None:intergenic
GATGCGGAGTAGATGACATA+GGG 0.587068 8_1:+76860899 None:intergenic
GCAAACGCAGCAGAAAAGCT+CGG 0.588350 8_1:+76861017 None:intergenic
TCTCAGAAAGCGTCGCCGAG+TGG 0.593703 8_1:-76860869 Msa1215570:CDS
CATGCCGCATCAATGTCTCC+TGG 0.594546 8_1:-76861069 Msa1215570:CDS
AACATTGTGAGGGCTGCTCA+GGG 0.594864 8_1:-76857444 Msa1215570:CDS
GATCCGGAGGCAGTTATGGA+GGG 0.595001 8_1:+76861254 None:intergenic
TATATGGAAGCAAGAAACAA+GGG 0.595854 8_1:+76857773 None:intergenic
TTGACTTGGAACCAAATCAA+GGG 0.596094 8_1:-76858001 Msa1215570:CDS
TCGATTGCGATCTGATGACC+AGG 0.596802 8_1:+76861051 None:intergenic
GCTTGATGGGATCCATGAAA+AGG 0.596972 8_1:-76860125 Msa1215570:CDS
GAAGTCATGGCATATCGTTA+GGG 0.598867 8_1:+76857294 None:intergenic
AAAATATGGAGCGAAAGAGG+TGG 0.600133 8_1:-76861568 Msa1215570:five_prime_UTR
AACTGATTCTGGAACAAACA+GGG 0.601896 8_1:+76858604 None:intergenic
ATGCAGGCATAGAGGCGGGA+AGG 0.603348 8_1:+76861153 None:intergenic
AAAAGAAATGGAGAGAACAA+TGG 0.604176 8_1:-76860577 Msa1215570:CDS
TGTTTCACACGCCACCGTTG+AGG 0.604532 8_1:-76860699 Msa1215570:CDS
GAGGAATTTCGTGAGGATCA+CGG 0.607762 8_1:+76861202 None:intergenic
GATTGAGATTAAGGAGGACA+AGG 0.608404 8_1:+76858645 None:intergenic
TCTTTGGATCGGAGAATCAA+CGG 0.609825 8_1:+76861425 None:intergenic
AGCGGCGGAACTCGGCCAAG+TGG 0.611618 8_1:+76861298 None:intergenic
CATTTCAATCATCTAGAGGA+AGG 0.612225 8_1:+76856722 None:intergenic
GATAATGTGAATGGATCGAA+TGG 0.615478 8_1:+76861376 None:intergenic
TTCAAAGCATCAAAGAGGGG+AGG 0.619344 8_1:+76857038 None:intergenic
GTTGCGTCCACAATCGGCGA+CGG 0.621132 8_1:-76860940 Msa1215570:CDS
TGACTTGGAACCAAATCAAG+GGG 0.622070 8_1:-76858000 Msa1215570:CDS
AGTTGTTGATGTGAAACCAC+AGG 0.622253 8_1:+76858049 None:intergenic
TTGCTGGGCTATAGGGAAGA+CGG 0.622634 8_1:+76860485 None:intergenic
TGCCTCCGGATCAAACCTCC+CGG 0.622961 8_1:-76861243 Msa1215570:CDS
ATTCCTCACTGCAACGCCTG+CGG 0.624299 8_1:-76861186 Msa1215570:CDS
GATCCATGAAAAGGTGGACA+AGG 0.624629 8_1:-76860116 Msa1215570:CDS
TCGGCCTCACCATTGCAAGA+AGG 0.626312 8_1:+76857945 None:intergenic
GTGTATGAATGGAGAAGTCA+TGG 0.626462 8_1:+76857281 None:intergenic
AAGTTGATGAAAACATTGTG+AGG 0.627661 8_1:-76857455 Msa1215570:CDS
CATCACATGTGCCAATCATG+AGG 0.628162 8_1:+76857362 None:intergenic
GATGTTATGTGTATGGCCTG+TGG 0.629984 8_1:-76858065 Msa1215570:CDS
CACGATCGTAAACCTGATCA+CGG 0.630349 8_1:+76860995 None:intergenic
TCACACCTGTGCTATCTCGA+TGG 0.632252 8_1:-76859020 Msa1215570:CDS
AGACCGCAGGCGTTGCAGTG+AGG 0.634031 8_1:+76861183 None:intergenic
TTGGGATATCTACCTTGATG+GGG 0.634651 8_1:-76857908 Msa1215570:CDS
CTCAGGAAGTAATTCCTCAA+CGG 0.634756 8_1:+76860685 None:intergenic
GGTGCATTTCAATCATCTAG+AGG 0.635544 8_1:+76856718 None:intergenic
GGAATGGTTTGGTGGAAGAG+CGG 0.636084 8_1:+76861280 None:intergenic
GTCATGTCCTCCAAAATCAA+CGG 0.636395 8_1:-76861345 Msa1215570:CDS
CAAGTGAGATGTCTACGCAT+GGG 0.638098 8_1:+76858021 None:intergenic
ATATGGAAGCAAGAAACAAG+GGG 0.638379 8_1:+76857774 None:intergenic
TTGAAGGACGGTAATCCACT+CGG 0.644376 8_1:+76860854 None:intergenic
GGCTGAGATTCAGAGTGGGA+GGG 0.646527 8_1:+76861446 None:intergenic
TAACACCATCGAGATAGCAC+AGG 0.651735 8_1:+76859015 None:intergenic
AACGTTCCTGATTTCCCGCG+GGG 0.652139 8_1:-76860781 Msa1215570:CDS
TGATGGGATCCATGAAAAGG+TGG 0.653101 8_1:-76860122 Msa1215570:CDS
TTGCAGTGAGGAATTTCGTG+AGG 0.654104 8_1:+76861195 None:intergenic
AACTATTATCAAGATTCGAG+GGG 0.661396 8_1:+76857071 None:intergenic
ATGGTTTGGTGGAAGAGCGG+CGG 0.661966 8_1:+76861283 None:intergenic
CAACGGCTGAGATTCAGAGT+GGG 0.664470 8_1:+76861442 None:intergenic
GTAGATCCGGAGTTGAAGGA+CGG 0.681063 8_1:+76860842 None:intergenic
GCTTCTGATTGAGATTAAGG+AGG 0.681178 8_1:+76858639 None:intergenic
GGTCTGTGCGATCACGACTG+CGG 0.684411 8_1:+76860963 None:intergenic
TCAACGGCTGAGATTCAGAG+TGG 0.692651 8_1:+76861441 None:intergenic
AGTTGATGAAAACATTGTGA+GGG 0.699031 8_1:-76857454 Msa1215570:CDS
AGGAAGTAATTCCTCAACGG+TGG 0.706756 8_1:+76860688 None:intergenic
ACTATTATCAAGATTCGAGG+GGG 0.712813 8_1:+76857072 None:intergenic
ATGACCAGGAGACATTGATG+CGG 0.728953 8_1:+76861065 None:intergenic
GGCGGCGTGAGAAATGACAC+CGG 0.740854 8_1:+76861095 None:intergenic
GACTTGGAACCAAATCAAGG+GGG 0.743974 8_1:-76857999 Msa1215570:CDS
GGAAGAGTGACATGATACAG+CGG 0.752026 8_1:+76861122 None:intergenic
CTCCGGATCAAACCTCCCGG+CGG 0.757304 8_1:-76861240 Msa1215570:CDS
GGCGTGAGAAATGACACCGG+CGG 0.784348 8_1:+76861098 None:intergenic
GAATTTCGTGAGGATCACGG+CGG 0.842560 8_1:+76861205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAAAAAATAAAACAAAA+GGG + chr8_1:76859982-76860001 None:intergenic 10.0%
!! AACTAAAAAAATAAAACAAA+AGG + chr8_1:76859983-76860002 None:intergenic 10.0%
!! AATATAAATACAAATAAAGT+AGG + chr8_1:76861302-76861321 None:intergenic 10.0%
!! AAATACAAAAAATCAAAACA+GGG + chr8_1:76858284-76858303 None:intergenic 15.0%
!!! TATTTTTGATCAAATCTTTT+AGG - chr8_1:76858531-76858550 Msa1215570:intron 15.0%
!!! AGTTTTTAGAATTTATTCAC+TGG - chr8_1:76857953-76857972 Msa1215570:CDS 20.0%
!!! GTTTTTAGAATTTATTCACT+GGG - chr8_1:76857954-76857973 Msa1215570:CDS 20.0%
!! CAAATACAAAAAATCAAAAC+AGG + chr8_1:76858285-76858304 None:intergenic 20.0%
!!! CTGTTTTGATTTTTTGTATT+TGG - chr8_1:76858283-76858302 Msa1215570:intron 20.0%
!!! CAACAAAATACTATTTTTCT+AGG - chr8_1:76858446-76858465 Msa1215570:intron 20.0%
!! GATATATTTCAGTATCTTTA+AGG + chr8_1:76858688-76858707 None:intergenic 20.0%
!! TCATCTTAAATAATGGTAAA+TGG - chr8_1:76858748-76858767 Msa1215570:intron 20.0%
!! TTATGTTCTTGAAAATCTAA+TGG + chr8_1:76858950-76858969 None:intergenic 20.0%
!! TAATCTAGTATACAATCTAA+AGG + chr8_1:76858975-76858994 None:intergenic 20.0%
!! TATTTGTTTCAAAATGAAGT+TGG - chr8_1:76859852-76859871 Msa1215570:intron 20.0%
!!! TTAATTTTCTTGTGTATGAA+TGG + chr8_1:76861005-76861024 None:intergenic 20.0%
!! CACAAGAAAATTAAAAAACA+AGG - chr8_1:76861011-76861030 Msa1215570:CDS 20.0%
!! ACAAAAAACAAAAAGAGAAA+TGG + chr8_1:76861332-76861351 None:intergenic 20.0%
!!! CTCTTTTTGTTTTTTGTTTT+TGG - chr8_1:76861335-76861354 Msa1215570:CDS 20.0%
!!! TCAAGATTTCATTTTTGTGA+GGG + chr8_1:76856794-76856813 None:intergenic 25.0%
!!! ATCAAGATTTCATTTTTGTG+AGG + chr8_1:76856795-76856814 None:intergenic 25.0%
! GATAGTAAAGTTAGATTTCA+AGG + chr8_1:76856873-76856892 None:intergenic 25.0%
! AAACACTTGTTTCATGAATT+CGG - chr8_1:76857538-76857557 Msa1215570:CDS 25.0%
! TTATTCACTGGGTTTATATT+TGG - chr8_1:76857965-76857984 Msa1215570:CDS 25.0%
!!! AGTTATTTGAGTTGTTGTTA+TGG - chr8_1:76858041-76858060 Msa1215570:CDS 25.0%
!! TTTTTCATTTCAATGCTTGA+TGG - chr8_1:76858133-76858152 Msa1215570:intron 25.0%
!! TTTTCATTTCAATGCTTGAT+GGG - chr8_1:76858134-76858153 Msa1215570:intron 25.0%
! AAACAGTGACACAAATTTAT+TGG - chr8_1:76858216-76858235 Msa1215570:intron 25.0%
! AAATTTCAACATACTTCACA+GGG + chr8_1:76858377-76858396 None:intergenic 25.0%
! AAAATTTCAACATACTTCAC+AGG + chr8_1:76858378-76858397 None:intergenic 25.0%
!!! GTGTCATTTATCTTCAATAA+TGG + chr8_1:76858633-76858652 None:intergenic 25.0%
! AAGGTATGTATGTTTGTATA+GGG + chr8_1:76858669-76858688 None:intergenic 25.0%
! TAAGGTATGTATGTTTGTAT+AGG + chr8_1:76858670-76858689 None:intergenic 25.0%
!! GTGTCATTCATCTTAAATAA+TGG - chr8_1:76858741-76858760 Msa1215570:intron 25.0%
!! AATTTTTGCCTATGAAACAA+GGG + chr8_1:76858843-76858862 None:intergenic 25.0%
!! TAATTTTTGCCTATGAAACA+AGG + chr8_1:76858844-76858863 None:intergenic 25.0%
! TTCCTAACTATAAAACCATA+CGG + chr8_1:76858868-76858887 None:intergenic 25.0%
!! TTTGAAACTTAAAGAGTAAG+AGG - chr8_1:76858892-76858911 Msa1215570:intron 25.0%
!!! AAGAGTATTCTGAATCATTT+TGG + chr8_1:76859125-76859144 None:intergenic 25.0%
! TTATCATAACATTGAAATGC+AGG - chr8_1:76859158-76859177 Msa1215570:intron 25.0%
! TATCATAACATTGAAATGCA+GGG - chr8_1:76859159-76859178 Msa1215570:intron 25.0%
! TCCTATATGATGAATTGAAT+AGG + chr8_1:76859327-76859346 None:intergenic 25.0%
! TATCTAAACATGGAAAAAAG+AGG + chr8_1:76859384-76859403 None:intergenic 25.0%
!! AAACTTTTGGCATTTTATGT+GGG + chr8_1:76859563-76859582 None:intergenic 25.0%
!! AAAACTTTTGGCATTTTATG+TGG + chr8_1:76859564-76859583 None:intergenic 25.0%
! TAGACATCAAGTCAATTTAT+CGG - chr8_1:76859821-76859840 Msa1215570:intron 25.0%
! TTTACAATGGTTGCAAAATT+AGG - chr8_1:76859908-76859927 Msa1215570:intron 25.0%
! AAACCTCAATTTAATACAAC+AGG - chr8_1:76859954-76859973 Msa1215570:intron 25.0%
!! AGTGCTCAAATCTTTTTATA+TGG + chr8_1:76860518-76860537 None:intergenic 25.0%
! CTTCAAGAAAAAAAATGTCA+AGG - chr8_1:76860538-76860557 Msa1215570:CDS 25.0%
! AAGAAAAAAAATGTCAAGGA+AGG - chr8_1:76860542-76860561 Msa1215570:CDS 25.0%
!! AACAGAATATTTCCTTTTGA+TGG - chr8_1:76860645-76860664 Msa1215570:CDS 25.0%
!! ACAGAATATTTCCTTTTGAT+GGG - chr8_1:76860646-76860665 Msa1215570:CDS 25.0%
! CTATAAAGCAACTGATAAAT+CGG - chr8_1:76860884-76860903 Msa1215570:CDS 25.0%
!!! TGCAATTGTGTATCATTTTT+TGG - chr8_1:76861061-76861080 Msa1215570:CDS 25.0%
!!! GCAATTGTGTATCATTTTTT+GGG - chr8_1:76861062-76861081 Msa1215570:CDS 25.0%
! TATGGATTCCTTATAATTTG+TGG - chr8_1:76861171-76861190 Msa1215570:CDS 25.0%
! GGTAAAAACCACAAATTATA+AGG + chr8_1:76861182-76861201 None:intergenic 25.0%
!!! TTTAGTGCTTTTTCGTTTTT+GGG + chr8_1:76861380-76861399 None:intergenic 25.0%
! TCCAGAAAATGTCATAAAAA+AGG - chr8_1:76861430-76861449 Msa1215570:five_prime_UTR 25.0%
!!! TCCTTTTTTATGACATTTTC+TGG + chr8_1:76861434-76861453 None:intergenic 25.0%
AAGTTAGATTTCAAGGTCTT+TGG + chr8_1:76856866-76856885 None:intergenic 30.0%
AAAAGAAATGGAGAGAACAA+TGG - chr8_1:76857695-76857714 Msa1215570:CDS 30.0%
GAGAACAATGGAACAAAAAA+TGG - chr8_1:76857707-76857726 Msa1215570:CDS 30.0%
!! ATTATGCTTAGCTTGTGATA+TGG - chr8_1:76857733-76857752 Msa1215570:CDS 30.0%
!!! TATGTTCTCTGCTGTTTTTT+CGG - chr8_1:76857760-76857779 Msa1215570:CDS 30.0%
!! TTTGGATTGGTTATTAGTGA+CGG - chr8_1:76857983-76858002 Msa1215570:CDS 30.0%
AATACATTACCTTCATTGTG+TGG + chr8_1:76858193-76858212 None:intergenic 30.0%
AAAACAGGGACAATTATACT+TGG + chr8_1:76858270-76858289 None:intergenic 30.0%
!!! GAGGATTTGGTTCTATTTTA+TGG - chr8_1:76858314-76858333 Msa1215570:intron 30.0%
! GTTCTATTTTATGGCATGAA+AGG - chr8_1:76858323-76858342 Msa1215570:intron 30.0%
! AGTAGTGTTATTATCGTGTT+GGG + chr8_1:76858608-76858627 None:intergenic 30.0%
! AAGTAGTGTTATTATCGTGT+TGG + chr8_1:76858609-76858628 None:intergenic 30.0%
TATGTATGTTTGTATAGGGA+TGG + chr8_1:76858665-76858684 None:intergenic 30.0%
!! AAATGGTGTTATTATCGTGT+TGG - chr8_1:76858765-76858784 Msa1215570:intron 30.0%
ATAGGCAAAAATTAACCGTA+TGG - chr8_1:76858850-76858869 Msa1215570:intron 30.0%
!!! AACCGTATGGTTTTATAGTT+AGG - chr8_1:76858863-76858882 Msa1215570:intron 30.0%
! ATTGATTTACTGATACTCAC+AGG + chr8_1:76859294-76859313 None:intergenic 30.0%
ATGATGAATTGAATAGGCTA+GGG + chr8_1:76859321-76859340 None:intergenic 30.0%
TATGATGAATTGAATAGGCT+AGG + chr8_1:76859322-76859341 None:intergenic 30.0%
GCCTATTCAATTCATCATAT+AGG - chr8_1:76859323-76859342 Msa1215570:intron 30.0%
CTTGTTCGATTATCTAAACA+TGG + chr8_1:76859394-76859413 None:intergenic 30.0%
CATGTTTAGATAATCGAACA+AGG - chr8_1:76859392-76859411 Msa1215570:intron 30.0%
TATACTTCTATCACATTCAC+GGG + chr8_1:76859458-76859477 None:intergenic 30.0%
CTATACTTCTATCACATTCA+CGG + chr8_1:76859459-76859478 None:intergenic 30.0%
! ATGTGATAGAAGTATAGAAC+TGG - chr8_1:76859462-76859481 Msa1215570:intron 30.0%
! TGTGATAGAAGTATAGAACT+GGG - chr8_1:76859463-76859482 Msa1215570:intron 30.0%
! ACTGGGTTTTTGTAAATTCT+TGG - chr8_1:76859480-76859499 Msa1215570:intron 30.0%
! TACCACATAAGATTTTTCCA+AGG + chr8_1:76859518-76859537 None:intergenic 30.0%
! TGTACAGAGACAAAAACTTT+TGG + chr8_1:76859576-76859595 None:intergenic 30.0%
! AATCAGTTCAGAATGTGTTT+TGG - chr8_1:76859683-76859702 Msa1215570:intron 30.0%
GGGTAACATTAAAACACATT+CGG - chr8_1:76859732-76859751 Msa1215570:intron 30.0%
CCATTGTAAAACTAAACTTC+TGG + chr8_1:76859898-76859917 None:intergenic 30.0%
!!! CCAGAAGTTTAGTTTTACAA+TGG - chr8_1:76859895-76859914 Msa1215570:intron 30.0%
GTAGCAAATAAGTTCATTGT+TGG + chr8_1:76860008-76860027 None:intergenic 30.0%
ATTTACAAGAGCAGAGAAAT+TGG - chr8_1:76860398-76860417 Msa1215570:intron 30.0%
TTTACAAGAGCAGAGAAATT+GGG - chr8_1:76860399-76860418 Msa1215570:intron 30.0%
TATATGGAAGCAAGAAACAA+GGG + chr8_1:76860502-76860521 None:intergenic 30.0%
TTATATGGAAGCAAGAAACA+AGG + chr8_1:76860503-76860522 None:intergenic 30.0%
AAAAAAAATGTCAAGGAAGG+TGG - chr8_1:76860545-76860564 Msa1215570:CDS 30.0%
! CAGAATATTTCCTTTTGATG+GGG - chr8_1:76860647-76860666 Msa1215570:CDS 30.0%
!! AAGTTGATGAAAACATTGTG+AGG - chr8_1:76860817-76860836 Msa1215570:CDS 30.0%
!! AGTTGATGAAAACATTGTGA+GGG - chr8_1:76860818-76860837 Msa1215570:CDS 30.0%
GACATTAAATGCCAATGATT+TGG + chr8_1:76860938-76860957 None:intergenic 30.0%
ATCATTGGCATTTAATGTCA+TGG - chr8_1:76860939-76860958 Msa1215570:CDS 30.0%
GAGAGTTAATACTTTCATGT+TGG - chr8_1:76861091-76861110 Msa1215570:CDS 30.0%
AACTATTATCAAGATTCGAG+GGG + chr8_1:76861204-76861223 None:intergenic 30.0%
CAACTATTATCAAGATTCGA+GGG + chr8_1:76861205-76861224 None:intergenic 30.0%
ACAACTATTATCAAGATTCG+AGG + chr8_1:76861206-76861225 None:intergenic 30.0%
!! ATTTTCAAAGCATCAAAGAG+GGG + chr8_1:76861240-76861259 None:intergenic 30.0%
!! GATTTTCAAAGCATCAAAGA+GGG + chr8_1:76861241-76861260 None:intergenic 30.0%
!! TGATTTTCAAAGCATCAAAG+AGG + chr8_1:76861242-76861261 None:intergenic 30.0%
!! CTTTGATGCTTTGAAAATCA+AGG - chr8_1:76861242-76861261 Msa1215570:CDS 30.0%
!!! TTTGTTTTTGGTAGTGAAAG+AGG - chr8_1:76861347-76861366 Msa1215570:exon 30.0%
!!! TTGTTTTTGGTAGTGAAAGA+GGG - chr8_1:76861348-76861367 Msa1215570:exon 30.0%
!!! CTTTAGTGCTTTTTCGTTTT+TGG + chr8_1:76861381-76861400 None:intergenic 30.0%
GTCATAAAAAAGGAGACTTA+AGG - chr8_1:76861440-76861459 Msa1215570:five_prime_UTR 30.0%
! GACTAATTTTATCTTCTCTC+TGG + chr8_1:76861508-76861527 None:intergenic 30.0%
!! AGGAAAATAGAAGTGTTGAT+TGG + chr8_1:76861533-76861552 None:intergenic 30.0%
AGATTTCAAGGTCTTTGGAT+CGG + chr8_1:76856861-76856880 None:intergenic 35.0%
GATAATGTGAATGGATCGAA+TGG + chr8_1:76856899-76856918 None:intergenic 35.0%
!! CGGTGATTTGATAATGTGAA+TGG + chr8_1:76856908-76856927 None:intergenic 35.0%
!!! TGAAATCTGACCGTTGATTT+TGG + chr8_1:76856940-76856959 None:intergenic 35.0%
TCCTGAGTGATAAGCATAAT+CGG - chr8_1:76857603-76857622 Msa1215570:CDS 35.0%
! ATTTCTTTTCGCAGTTGCTA+TGG + chr8_1:76857684-76857703 None:intergenic 35.0%
ATAGCAACTGCGAAAAGAAA+TGG - chr8_1:76857683-76857702 Msa1215570:CDS 35.0%
!!! ATGTTCTCTGCTGTTTTTTC+GGG - chr8_1:76857761-76857780 Msa1215570:CDS 35.0%
TTGTACAGGTGTGTATACTT+TGG - chr8_1:76857815-76857834 Msa1215570:CDS 35.0%
CACTGGGTTTATATTTGGAT+TGG - chr8_1:76857970-76857989 Msa1215570:CDS 35.0%
TGTTGTTATGGTGTTTCAGT+TGG - chr8_1:76858053-76858072 Msa1215570:CDS 35.0%
! TGTACTTGCTAGAATCTGTA+AGG - chr8_1:76858404-76858423 Msa1215570:intron 35.0%
! TATCCAGTGTCGAATAGTAT+AGG - chr8_1:76858704-76858723 Msa1215570:intron 35.0%
! ATCCAGTGTCGAATAGTATA+GGG - chr8_1:76858705-76858724 Msa1215570:intron 35.0%
AGTAAGAGGATACTGATCTT+TGG - chr8_1:76858906-76858925 Msa1215570:intron 35.0%
!! CTAACTCTTTGGCTTGTAAT+GGG + chr8_1:76859006-76859025 None:intergenic 35.0%
ATTATGCTGAGCTAACTCTT+TGG + chr8_1:76859017-76859036 None:intergenic 35.0%
ACTATATTGATCATCTCCCA+TGG + chr8_1:76859060-76859079 None:intergenic 35.0%
ATTTACTGATACTCACAGGA+AGG + chr8_1:76859290-76859309 None:intergenic 35.0%
! GAAAAAAGAGGTGGTGTTAA+CGG + chr8_1:76859372-76859391 None:intergenic 35.0%
CTAAACATGGAAAAAAGAGG+TGG + chr8_1:76859381-76859400 None:intergenic 35.0%
ATACTTCTATCACATTCACG+GGG + chr8_1:76859457-76859476 None:intergenic 35.0%
AGCCTTGGAAAAATCTTATG+TGG - chr8_1:76859513-76859532 Msa1215570:intron 35.0%
TGTACAGTAGTTATGTTTCC+TGG - chr8_1:76859590-76859609 Msa1215570:intron 35.0%
TCAATCAGAAGCCCATAATT+AGG - chr8_1:76859644-76859663 Msa1215570:intron 35.0%
ACAAACAGGGTCCTAATTAT+GGG + chr8_1:76859658-76859677 None:intergenic 35.0%
AACAAACAGGGTCCTAATTA+TGG + chr8_1:76859659-76859678 None:intergenic 35.0%
!! AACTGATTCTGGAACAAACA+GGG + chr8_1:76859671-76859690 None:intergenic 35.0%
! AACACATTCTGAACTGATTC+TGG + chr8_1:76859682-76859701 None:intergenic 35.0%
ACATTCGGTTCCTAATTATG+AGG - chr8_1:76859747-76859766 Msa1215570:intron 35.0%
! CAGTTTTGCTCCTCATAATT+AGG + chr8_1:76859760-76859779 None:intergenic 35.0%
TATAGCCTCTAACAATTGTG+TGG + chr8_1:76859785-76859804 None:intergenic 35.0%
!!! AAATTGAGGTTTTCAAGTGC+AGG + chr8_1:76859946-76859965 None:intergenic 35.0%
GAGCCTGTTGTATTAAATTG+AGG + chr8_1:76859960-76859979 None:intergenic 35.0%
CCTGCACAATCAATAAAATG+TGG + chr8_1:76860138-76860157 None:intergenic 35.0%
!! CCACATTTTATTGATTGTGC+AGG - chr8_1:76860135-76860154 Msa1215570:CDS 35.0%
CGATTGTTGTATTGCTCATA+GGG - chr8_1:76860161-76860180 Msa1215570:CDS 35.0%
!! TTGACTTGGAACCAAATCAA+GGG - chr8_1:76860271-76860290 Msa1215570:intron 35.0%
! AGGTAGATATCCCAAAGTTT+TGG + chr8_1:76860359-76860378 None:intergenic 35.0%
! TTTGGGATATCTACCTTGAT+GGG - chr8_1:76860363-76860382 Msa1215570:intron 35.0%
TTACAAGAGCAGAGAAATTG+GGG - chr8_1:76860400-76860419 Msa1215570:intron 35.0%
ATATGGAAGCAAGAAACAAG+GGG + chr8_1:76860501-76860520 None:intergenic 35.0%
AGAATGGGAACTGCAAATAA+CGG + chr8_1:76860572-76860591 None:intergenic 35.0%
AAGATTGAGGATGAGAGATA+AGG + chr8_1:76860609-76860628 None:intergenic 35.0%
ATCTCTCATCCTCAATCTTA+AGG - chr8_1:76860610-76860629 Msa1215570:CDS 35.0%
! CATAGATCATTTGAAGCATC+AGG + chr8_1:76860678-76860697 None:intergenic 35.0%
ATCTGCGATTAAGCAATCAA+TGG - chr8_1:76860766-76860785 Msa1215570:CDS 35.0%
GTACAAGTGTGATGATTCTT+GGG - chr8_1:76860788-76860807 Msa1215570:CDS 35.0%
!!! AACGAGCCAGTATTTTTTGT+AGG - chr8_1:76861121-76861140 Msa1215570:CDS 35.0%
ACTATTATCAAGATTCGAGG+GGG + chr8_1:76861203-76861222 None:intergenic 35.0%
CATTTCAATCATCTAGAGGA+AGG + chr8_1:76861553-76861572 None:intergenic 35.0%
AAAATATGGAGCGAAAGAGG+TGG - chr8_1:76856704-76856723 Msa1215570:three_prime_UTR 40.0%
AAATATGGAGCGAAAGAGGT+GGG - chr8_1:76856705-76856724 Msa1215570:three_prime_UTR 40.0%
GGATGGAAGAGAGTAAAAGT+AGG - chr8_1:76856731-76856750 Msa1215570:three_prime_UTR 40.0%
TCTTTGGATCGGAGAATCAA+CGG + chr8_1:76856850-76856869 None:intergenic 40.0%
ATGTGAATGGATCGAATGGA+TGG + chr8_1:76856895-76856914 None:intergenic 40.0%
!! GTTGATTTTGGAGGACATGA+CGG + chr8_1:76856928-76856947 None:intergenic 40.0%
GTCATGTCCTCCAAAATCAA+CGG - chr8_1:76856927-76856946 Msa1215570:intron 40.0%
!!! AATCTGACCGTTGATTTTGG+AGG + chr8_1:76856937-76856956 None:intergenic 40.0%
!! TTTCATGAATTCGGTGTTGC+AGG - chr8_1:76857547-76857566 Msa1215570:CDS 40.0%
CTCAGGAAGTAATTCCTCAA+CGG + chr8_1:76857590-76857609 None:intergenic 40.0%
ACCGATTATGCTTATCACTC+AGG + chr8_1:76857607-76857626 None:intergenic 40.0%
! CATCAGCATTGCTCATTTTC+TGG + chr8_1:76857637-76857656 None:intergenic 40.0%
AAGAACTTTGCTGGGCTATA+GGG + chr8_1:76857797-76857816 None:intergenic 40.0%
ACCTGTACAAGAACTTTGCT+GGG + chr8_1:76857805-76857824 None:intergenic 40.0%
!! GTGTGTATACTTTGGAGCTT+AGG - chr8_1:76857823-76857842 Msa1215570:CDS 40.0%
TGTTATGGTGTTTCAGTTGG+TGG - chr8_1:76858056-76858075 Msa1215570:CDS 40.0%
! TTGTTCATAGCTTGCAAGGT+TGG + chr8_1:76858098-76858117 None:intergenic 40.0%
TTTGTATTTGGCTGAGAGAG+AGG - chr8_1:76858295-76858314 Msa1215570:intron 40.0%
! ACTTGCTAGAATCTGTAAGG+TGG - chr8_1:76858407-76858426 Msa1215570:intron 40.0%
ATCTGTAAGGTGGCTTCTAT+TGG - chr8_1:76858417-76858436 Msa1215570:intron 40.0%
AGAAACCAGAGCTTCAACAA+TGG + chr8_1:76858507-76858526 None:intergenic 40.0%
! TGTTGAAGCTCTGGTTTCTT+TGG - chr8_1:76858508-76858527 Msa1215570:intron 40.0%
GGTATGTCTGTTTCAACTCA+TGG - chr8_1:76858552-76858571 Msa1215570:intron 40.0%
TCTGTTTCAACTCATGGCTT+TGG - chr8_1:76858558-76858577 Msa1215570:intron 40.0%
!! TTCAACTCATGGCTTTGGTT+TGG - chr8_1:76858563-76858582 Msa1215570:CDS 40.0%
! AGTGTTATTATCGTGTTGGG+AGG + chr8_1:76858605-76858624 None:intergenic 40.0%
ATCCCTATACTATTCGACAC+TGG + chr8_1:76858710-76858729 None:intergenic 40.0%
! AGTGTCGAATAGTATAGGGA+TGG - chr8_1:76858709-76858728 Msa1215570:intron 40.0%
!! GGTGTTATTATCGTGTTGGA+AGG - chr8_1:76858769-76858788 Msa1215570:intron 40.0%
GTTATTATCGTGTTGGAAGG+TGG - chr8_1:76858772-76858791 Msa1215570:intron 40.0%
! GGATAATGTAGGCTTTGGTT+TGG + chr8_1:76858811-76858830 None:intergenic 40.0%
ATGAAACAAGGGATTGAGGT+GGG + chr8_1:76858832-76858851 None:intergenic 40.0%
TATGAAACAAGGGATTGAGG+TGG + chr8_1:76858833-76858852 None:intergenic 40.0%
! ACCTCAATCCCTTGTTTCAT+AGG - chr8_1:76858832-76858851 Msa1215570:intron 40.0%
!! GCTAACTCTTTGGCTTGTAA+TGG + chr8_1:76859007-76859026 None:intergenic 40.0%
AGTTACAAACATGCTGACCA+TGG - chr8_1:76859040-76859059 Msa1215570:CDS 40.0%
GTTACAAACATGCTGACCAT+GGG - chr8_1:76859041-76859060 Msa1215570:CDS 40.0%
CTGATCAATGTCAACTCCTA+GGG + chr8_1:76859211-76859230 None:intergenic 40.0%
TCTGATCAATGTCAACTCCT+AGG + chr8_1:76859212-76859231 None:intergenic 40.0%
TTCACGGGGTTAAAATGCTA+AGG + chr8_1:76859443-76859462 None:intergenic 40.0%
!! CTTGGCTAAGATTTTAGCCT+TGG - chr8_1:76859498-76859517 Msa1215570:intron 40.0%
AAGGAACTTGCAAAGAAACC+AGG + chr8_1:76859611-76859630 None:intergenic 40.0%
GATTGAGATTAAGGAGGACA+AGG + chr8_1:76859630-76859649 None:intergenic 40.0%
GCTTCTGATTGAGATTAAGG+AGG + chr8_1:76859636-76859655 None:intergenic 40.0%
TGGGCTTCTGATTGAGATTA+AGG + chr8_1:76859639-76859658 None:intergenic 40.0%
!! GAACTGATTCTGGAACAAAC+AGG + chr8_1:76859672-76859691 None:intergenic 40.0%
CTGTTCCACACAATTGTTAG+AGG - chr8_1:76859777-76859796 Msa1215570:intron 40.0%
AACTCTTCAGTGCACAAAGA+AGG + chr8_1:76860030-76860049 None:intergenic 40.0%
CTTGAACTTGCGTTTCATGA+AGG - chr8_1:76860097-76860116 Msa1215570:CDS 40.0%
GCGATTGTTGTATTGCTCAT+AGG - chr8_1:76860160-76860179 Msa1215570:CDS 40.0%
! ATTGCTCATAGGGTATTCTC+TGG - chr8_1:76860171-76860190 Msa1215570:CDS 40.0%
! GGGTATTCTCTGGTATTTTG+CGG - chr8_1:76860181-76860200 Msa1215570:CDS 40.0%
AGTTGTTGATGTGAAACCAC+AGG + chr8_1:76860226-76860245 None:intergenic 40.0%
!! CTTGACTTGGAACCAAATCA+AGG - chr8_1:76860270-76860289 Msa1215570:intron 40.0%
! TGACTTGGAACCAAATCAAG+GGG - chr8_1:76860272-76860291 Msa1215570:intron 40.0%
TTAGTAGAACCCCCTTGATT+TGG + chr8_1:76860285-76860304 None:intergenic 40.0%
!! AGATATCCCAAAGTTTTGGC+TGG + chr8_1:76860355-76860374 None:intergenic 40.0%
!! CTTTGGGATATCTACCTTGA+TGG - chr8_1:76860362-76860381 Msa1215570:intron 40.0%
TTGGGATATCTACCTTGATG+GGG - chr8_1:76860364-76860383 Msa1215570:intron 40.0%
ACTGCTGACAGAAAAACTTC+TGG + chr8_1:76860431-76860450 None:intergenic 40.0%
! GTTTTTCTGTCAGCAGTGTA+AGG - chr8_1:76860434-76860453 Msa1215570:intron 40.0%
CATCCTCAATCTTAAGGAGT+CGG - chr8_1:76860616-76860635 Msa1215570:CDS 40.0%
! AAACCGACTCCTTAAGATTG+AGG + chr8_1:76860622-76860641 None:intergenic 40.0%
TCAATCTTAAGGAGTCGGTT+TGG - chr8_1:76860621-76860640 Msa1215570:CDS 40.0%
GGTACAAGTGTGATGATTCT+TGG - chr8_1:76860787-76860806 Msa1215570:CDS 40.0%
TAAATCGGTTGCCTCATGAT+TGG - chr8_1:76860899-76860918 Msa1215570:CDS 40.0%
CATGTGATGGTCCAAATCAT+TGG - chr8_1:76860924-76860943 Msa1215570:CDS 40.0%
GAAGTCATGGCATATCGTTA+GGG + chr8_1:76860981-76861000 None:intergenic 40.0%
AGAAGTCATGGCATATCGTT+AGG + chr8_1:76860982-76861001 None:intergenic 40.0%
GTGTATGAATGGAGAAGTCA+TGG + chr8_1:76860994-76861013 None:intergenic 40.0%
! GGAGTGCCTACAAAAAATAC+TGG + chr8_1:76861130-76861149 None:intergenic 40.0%
! TCCAACTTTCTGGAAACTTG+AGG - chr8_1:76861147-76861166 Msa1215570:CDS 40.0%
! CCAACTTTCTGGAAACTTGA+GGG - chr8_1:76861148-76861167 Msa1215570:CDS 40.0%
! TTTCTGGAAACTTGAGGGTA+TGG - chr8_1:76861153-76861172 Msa1215570:CDS 40.0%
! TTTTCTGGACTTGCATGTCT+AGG + chr8_1:76861419-76861438 None:intergenic 40.0%
TTACGAAGACTTCTCCTGAT+GGG + chr8_1:76861467-76861486 None:intergenic 40.0%
GGTGCATTTCAATCATCTAG+AGG + chr8_1:76861557-76861576 None:intergenic 40.0%
GAGGAATTTCGTGAGGATCA+CGG + chr8_1:76857073-76857092 None:intergenic 45.0%
TTGCAGTGAGGAATTTCGTG+AGG + chr8_1:76857080-76857099 None:intergenic 45.0%
GGAAGAGTGACATGATACAG+CGG + chr8_1:76857153-76857172 None:intergenic 45.0%
ATGACCAGGAGACATTGATG+CGG + chr8_1:76857210-76857229 None:intergenic 45.0%
CACGATCGTAAACCTGATCA+CGG + chr8_1:76857280-76857299 None:intergenic 45.0%
GATGCGGAGTAGATGACATA+GGG + chr8_1:76857376-76857395 None:intergenic 45.0%
TATGTCATCTACTCCGCATC+CGG - chr8_1:76857376-76857395 Msa1215570:exon 45.0%
!! TTTCTGAGATTCTCCGGATG+CGG + chr8_1:76857392-76857411 None:intergenic 45.0%
TTGAAGGACGGTAATCCACT+CGG + chr8_1:76857421-76857440 None:intergenic 45.0%
GGGAAATCAGGAACGTTGAT+CGG + chr8_1:76857488-76857507 None:intergenic 45.0%
AGGAAGTAATTCCTCAACGG+TGG + chr8_1:76857587-76857606 None:intergenic 45.0%
! AATGCTGATGATGCCGCAAA+TGG - chr8_1:76857647-76857666 Msa1215570:CDS 45.0%
GGCAGAATCATCACCATTTG+CGG + chr8_1:76857663-76857682 None:intergenic 45.0%
CAAGAACTTTGCTGGGCTAT+AGG + chr8_1:76857798-76857817 None:intergenic 45.0%
CACCTGTACAAGAACTTTGC+TGG + chr8_1:76857806-76857825 None:intergenic 45.0%
ATGCCTTTGATCAGAGGTCT+CGG + chr8_1:76857868-76857887 None:intergenic 45.0%
CTGGATATGCCTTTGATCAG+AGG + chr8_1:76857874-76857893 None:intergenic 45.0%
CAACACTGACACATCAACAC+TGG + chr8_1:76857893-76857912 None:intergenic 45.0%
! ATAGCTTGCAAGGTTGGACT+TGG + chr8_1:76858092-76858111 None:intergenic 45.0%
! CCTGTTGTTCATAGCTTGCA+AGG + chr8_1:76858102-76858121 None:intergenic 45.0%
CCTTGCAAGCTATGAACAAC+AGG - chr8_1:76858099-76858118 Msa1215570:CDS 45.0%
GCTTGATGGGATCCATGAAA+AGG - chr8_1:76858147-76858166 Msa1215570:intron 45.0%
TGATGGGATCCATGAAAAGG+TGG - chr8_1:76858150-76858169 Msa1215570:intron 45.0%
GATCCATGAAAAGGTGGACA+AGG - chr8_1:76858156-76858175 Msa1215570:intron 45.0%
! GATCCTTGTCCACCTTTTCA+TGG + chr8_1:76858162-76858181 None:intergenic 45.0%
TTTGGCTGAGAGAGAGGATT+TGG - chr8_1:76858301-76858320 Msa1215570:intron 45.0%
CTTCACAGGGACAACATATC+TGG + chr8_1:76858364-76858383 None:intergenic 45.0%
TCGAACCATTGTTGAAGCTC+TGG - chr8_1:76858499-76858518 Msa1215570:intron 45.0%
GTTATTATCGTGTTGGGAGG+AGG + chr8_1:76858602-76858621 None:intergenic 45.0%
GTCGAATAGTATAGGGATGG+CGG - chr8_1:76858712-76858731 Msa1215570:intron 45.0%
AGGTGGGATAATGTAGGCTT+TGG + chr8_1:76858816-76858835 None:intergenic 45.0%
GGATTGAGGTGGGATAATGT+AGG + chr8_1:76858822-76858841 None:intergenic 45.0%
GCCTATGAAACAAGGGATTG+AGG + chr8_1:76858836-76858855 None:intergenic 45.0%
TAACATTGAAATGCAGGGCG+AGG - chr8_1:76859164-76859183 Msa1215570:intron 45.0%
AACATTGAAATGCAGGGCGA+GGG - chr8_1:76859165-76859184 Msa1215570:intron 45.0%
TAACACCATCGAGATAGCAC+AGG + chr8_1:76859260-76859279 None:intergenic 45.0%
! TGCTATCTCGATGGTGTTAG+CGG - chr8_1:76859261-76859280 Msa1215570:intron 45.0%
ATGCTAAGGCAACTTTCTCC+CGG + chr8_1:76859429-76859448 None:intergenic 45.0%
GCGGTCAGATGTTATGTGTA+TGG - chr8_1:76860200-76860219 Msa1215570:CDS 45.0%
GATGTTATGTGTATGGCCTG+TGG - chr8_1:76860207-76860226 Msa1215570:intron 45.0%
CAAGTGAGATGTCTACGCAT+GGG + chr8_1:76860254-76860273 None:intergenic 45.0%
TCAAGTGAGATGTCTACGCA+TGG + chr8_1:76860255-76860274 None:intergenic 45.0%
CGTAGACATCTCACTTGACT+TGG - chr8_1:76860257-76860276 Msa1215570:intron 45.0%
GACTTGGAACCAAATCAAGG+GGG - chr8_1:76860273-76860292 Msa1215570:intron 45.0%
TCAAGGGGGTTCTACTAAGA+TGG - chr8_1:76860287-76860306 Msa1215570:intron 45.0%
GCTTCCAATCCTTCTTGCAA+TGG - chr8_1:76860318-76860337 Msa1215570:intron 45.0%
CTCACCATTGCAAGAAGGAT+TGG + chr8_1:76860325-76860344 None:intergenic 45.0%
CAATCCTTCTTGCAATGGTG+AGG - chr8_1:76860323-76860342 Msa1215570:intron 45.0%
!!! CCCAAAGTTTTGGCTGGAAT+CGG + chr8_1:76860349-76860368 None:intergenic 45.0%
CCGATTCCAGCCAAAACTTT+GGG - chr8_1:76860346-76860365 Msa1215570:intron 45.0%
CTCTCAAGCAGATGTCCATA+AGG - chr8_1:76860469-76860488 Msa1215570:intron 45.0%
AACAAGGGGAAGCTTCCTTA+TGG + chr8_1:76860487-76860506 None:intergenic 45.0%
TTTGCAGTTCCCATTCTCAC+TGG - chr8_1:76860575-76860594 Msa1215570:CDS 45.0%
GTGACATGTCCAGTGAGAAT+GGG + chr8_1:76860587-76860606 None:intergenic 45.0%
CACTCTGGTAAGTTAGATGC+TGG - chr8_1:76860729-76860748 Msa1215570:CDS 45.0%
CATCACATGTGCCAATCATG+AGG + chr8_1:76860913-76860932 None:intergenic 45.0%
CTCATGATTGGCACATGTGA+TGG - chr8_1:76860911-76860930 Msa1215570:CDS 45.0%
TTGTAGGCACTCCAACTTTC+TGG - chr8_1:76861137-76861156 Msa1215570:CDS 45.0%
CCCTCAAGTTTCCAGAAAGT+TGG + chr8_1:76861151-76861170 None:intergenic 45.0%
! TTCAAAGCATCAAAGAGGGG+AGG + chr8_1:76861237-76861256 None:intergenic 45.0%
GTTACGAAGACTTCTCCTGA+TGG + chr8_1:76861468-76861487 None:intergenic 45.0%
AGATTCAGAGTGGGAGGGAA+TGG + chr8_1:76856824-76856843 None:intergenic 50.0%
CAACGGCTGAGATTCAGAGT+GGG + chr8_1:76856833-76856852 None:intergenic 50.0%
TCAACGGCTGAGATTCAGAG+TGG + chr8_1:76856834-76856853 None:intergenic 50.0%
!! GGAATGGTTTGGTGGAAGAG+CGG + chr8_1:76856995-76857014 None:intergenic 50.0%
ATGGAGGGAGAGGAATGGTT+TGG + chr8_1:76857006-76857025 None:intergenic 50.0%
CAGTTATGGAGGGAGAGGAA+TGG + chr8_1:76857011-76857030 None:intergenic 50.0%
GTTTGATCCGGAGGCAGTTA+TGG + chr8_1:76857025-76857044 None:intergenic 50.0%
GAATTTCGTGAGGATCACGG+CGG + chr8_1:76857070-76857089 None:intergenic 50.0%
ATGAGATGCAGGCATAGAGG+CGG + chr8_1:76857127-76857146 None:intergenic 50.0%
AGACATTGATGCGGCATGTG+CGG + chr8_1:76857201-76857220 None:intergenic 50.0%
TCGATTGCGATCTGATGACC+AGG + chr8_1:76857224-76857243 None:intergenic 50.0%
GCAAACGCAGCAGAAAAGCT+CGG + chr8_1:76857258-76857277 None:intergenic 50.0%
!! TTTTTCTCCGTCGCCGATTG+TGG + chr8_1:76857342-76857361 None:intergenic 50.0%
GGATGCGGAGTAGATGACAT+AGG + chr8_1:76857377-76857396 None:intergenic 50.0%
!! CGACGCTTTCTGAGATTCTC+CGG + chr8_1:76857398-76857417 None:intergenic 50.0%
GGATTACCGTCCTTCAACTC+CGG - chr8_1:76857424-76857443 Msa1215570:CDS 50.0%
GTAGATCCGGAGTTGAAGGA+CGG + chr8_1:76857433-76857452 None:intergenic 50.0%
TCAACGTTCCTGATTTCCCG+CGG - chr8_1:76857489-76857508 Msa1215570:CDS 50.0%
TTGCGGGGGTTGAACAATCT+CGG - chr8_1:76857515-76857534 Msa1215570:CDS 50.0%
TTGCTGGGCTATAGGGAAGA+CGG + chr8_1:76857790-76857809 None:intergenic 50.0%
GCCCAGCAAAGTTCTTGTAC+AGG - chr8_1:76857801-76857820 Msa1215570:CDS 50.0%
CAGAGGTCTCGGTGATAAAC+AGG + chr8_1:76857857-76857876 None:intergenic 50.0%
TCACCGAGACCTCTGATCAA+AGG - chr8_1:76857862-76857881 Msa1215570:CDS 50.0%
CGACGTAAGCCACACAATGA+AGG - chr8_1:76858181-76858200 Msa1215570:intron 50.0%
TCACACCTGTGCTATCTCGA+TGG - chr8_1:76859252-76859271 Msa1215570:intron 50.0%
GAACAAGGCTTGTCTATCCC+CGG - chr8_1:76859407-76859426 Msa1215570:intron 50.0%
AACAAGGCTTGTCTATCCCC+GGG - chr8_1:76859408-76859427 Msa1215570:intron 50.0%
TGCTAAGGCAACTTTCTCCC+GGG + chr8_1:76859428-76859447 None:intergenic 50.0%
ACTCCTGCATAGAGGGAGTA+TGG - chr8_1:76859711-76859730 Msa1215570:intron 50.0%
! CTCCTGCATAGAGGGAGTAT+GGG - chr8_1:76859712-76859731 Msa1215570:intron 50.0%
TACCCATACTCCCTCTATGC+AGG + chr8_1:76859717-76859736 None:intergenic 50.0%
! GCCGATTCCAGCCAAAACTT+TGG - chr8_1:76860345-76860364 Msa1215570:intron 50.0%
! ATCTACCTTGATGGGGTGCT+TGG - chr8_1:76860371-76860390 Msa1215570:intron 50.0%
TCTATCCAAGCACCCCATCA+AGG + chr8_1:76860379-76860398 None:intergenic 50.0%
TCAGCAGTGTAAGGTGAAGC+AGG - chr8_1:76860443-76860462 Msa1215570:intron 50.0%
GGTGACATGTCCAGTGAGAA+TGG + chr8_1:76860588-76860607 None:intergenic 50.0%
TCAGGCTCATCCCCATCAAA+AGG + chr8_1:76860660-76860679 None:intergenic 50.0%
! TTTGCTGTCGTCACTCACTC+TGG - chr8_1:76860714-76860733 Msa1215570:CDS 50.0%
AAACATTGTGAGGGCTGCTC+AGG - chr8_1:76860827-76860846 Msa1215570:CDS 50.0%
AACATTGTGAGGGCTGCTCA+GGG - chr8_1:76860828-76860847 Msa1215570:CDS 50.0%
AAGCATCAAAGAGGGGAGGA+GGG + chr8_1:76861233-76861252 None:intergenic 50.0%
! AAAGCATCAAAGAGGGGAGG+AGG + chr8_1:76861234-76861253 None:intergenic 50.0%
AGGAGACTTAAGGTCCCATC+AGG - chr8_1:76861450-76861469 Msa1215570:five_prime_UTR 50.0%
ATGGAGCGAAAGAGGTGGGA+TGG - chr8_1:76856709-76856728 Msa1215570:three_prime_UTR 55.0%
TGGAGCGAAAGAGGTGGGAT+GGG - chr8_1:76856710-76856729 Msa1215570:three_prime_UTR 55.0%
GGGCTGCGCTTCACTCAATA+TGG + chr8_1:76856774-76856793 None:intergenic 55.0%
TTCAGAGTGGGAGGGAATGG+AGG + chr8_1:76856821-76856840 None:intergenic 55.0%
GGCTGAGATTCAGAGTGGGA+GGG + chr8_1:76856829-76856848 None:intergenic 55.0%
ACCACAACCATGTCCCCACT+TGG - chr8_1:76856959-76856978 Msa1215570:three_prime_UTR 55.0%
!! ATGGTTTGGTGGAAGAGCGG+CGG + chr8_1:76856992-76857011 None:intergenic 55.0%
! GAGGGAGAGGAATGGTTTGG+TGG + chr8_1:76857003-76857022 None:intergenic 55.0%
TCTCCCTCCATAACTGCCTC+CGG - chr8_1:76857015-76857034 Msa1215570:three_prime_UTR 55.0%
GATCCGGAGGCAGTTATGGA+GGG + chr8_1:76857021-76857040 None:intergenic 55.0%
TGATCCGGAGGCAGTTATGG+AGG + chr8_1:76857022-76857041 None:intergenic 55.0%
ATTCCTCACTGCAACGCCTG+CGG - chr8_1:76857086-76857105 Msa1215570:three_prime_UTR 55.0%
TGAGATGCAGGCATAGAGGC+GGG + chr8_1:76857126-76857145 None:intergenic 55.0%
CGCATGAGATGCAGGCATAG+AGG + chr8_1:76857130-76857149 None:intergenic 55.0%
TCATGTCACTCTTCCACCGC+CGG - chr8_1:76857158-76857177 Msa1215570:three_prime_UTR 55.0%
CATGCCGCATCAATGTCTCC+TGG - chr8_1:76857203-76857222 Msa1215570:three_prime_UTR 55.0%
CAGACCGTTGCGTCCACAAT+CGG - chr8_1:76857326-76857345 Msa1215570:three_prime_UTR 55.0%
TCGCGTAGATCCGGAGTTGA+AGG + chr8_1:76857437-76857456 None:intergenic 55.0%
CAACGTTCCTGATTTCCCGC+GGG - chr8_1:76857490-76857509 Msa1215570:CDS 55.0%
AACGTTCCTGATTTCCCGCG+GGG - chr8_1:76857491-76857510 Msa1215570:CDS 55.0%
TGTTTCACACGCCACCGTTG+AGG - chr8_1:76857573-76857592 Msa1215570:CDS 55.0%
GAAATGCAGGGCGAGGGTTT+AGG - chr8_1:76859171-76859190 Msa1215570:intron 55.0%
! GGTCTCTTGCTTGTTGCCCT+AGG - chr8_1:76859192-76859211 Msa1215570:intron 55.0%
GCTAAGGCAACTTTCTCCCG+GGG + chr8_1:76859427-76859446 None:intergenic 55.0%
TGGACTGCACTCCTGCATAG+AGG - chr8_1:76859703-76859722 Msa1215570:intron 55.0%
GGACTGCACTCCTGCATAGA+GGG - chr8_1:76859704-76859723 Msa1215570:intron 55.0%
TCGGCCTCACCATTGCAAGA+AGG + chr8_1:76860330-76860349 None:intergenic 55.0%
AGCATCAAAGAGGGGAGGAG+GGG + chr8_1:76861232-76861251 None:intergenic 55.0%
GCGAAAGAGGTGGGATGGGA+TGG - chr8_1:76856714-76856733 Msa1215570:three_prime_UTR 60.0%
CGGCTGAGATTCAGAGTGGG+AGG + chr8_1:76856830-76856849 None:intergenic 60.0%
GCCAAGTGGGGACATGGTTG+TGG + chr8_1:76856963-76856982 None:intergenic 60.0%
AACTCGGCCAAGTGGGGACA+TGG + chr8_1:76856969-76856988 None:intergenic 60.0%
GGAGGCAGTTATGGAGGGAG+AGG + chr8_1:76857016-76857035 None:intergenic 60.0%
TGCCTCCGGATCAAACCTCC+CGG - chr8_1:76857029-76857048 Msa1215570:three_prime_UTR 60.0%
TTCGTGAGGATCACGGCGGA+GGG + chr8_1:76857066-76857085 None:intergenic 60.0%
TTTCGTGAGGATCACGGCGG+AGG + chr8_1:76857067-76857086 None:intergenic 60.0%
ATGCAGGCATAGAGGCGGGA+AGG + chr8_1:76857122-76857141 None:intergenic 60.0%
TACAGCGGCGCATGAGATGC+AGG + chr8_1:76857138-76857157 None:intergenic 60.0%
GTGAGAAATGACACCGGCGG+TGG + chr8_1:76857174-76857193 None:intergenic 60.0%
GGCGTGAGAAATGACACCGG+CGG + chr8_1:76857177-76857196 None:intergenic 60.0%
GGCGGCGTGAGAAATGACAC+CGG + chr8_1:76857180-76857199 None:intergenic 60.0%
CATTGATGCGGCATGTGCGG+CGG + chr8_1:76857198-76857217 None:intergenic 60.0%
CTGCTGCGTTTGCCGTGATC+AGG - chr8_1:76857265-76857284 Msa1215570:three_prime_UTR 60.0%
GGTCTGTGCGATCACGACTG+CGG + chr8_1:76857312-76857331 None:intergenic 60.0%
! GTCGCCGATTGTGGACGCAA+CGG + chr8_1:76857333-76857352 None:intergenic 60.0%
GTTGCGTCCACAATCGGCGA+CGG - chr8_1:76857332-76857351 Msa1215570:three_prime_UTR 60.0%
!! TCTCAGAAAGCGTCGCCGAG+TGG - chr8_1:76857403-76857422 Msa1215570:CDS 60.0%
AGAGCGCGTTCGCGTAGATC+CGG + chr8_1:76857446-76857465 None:intergenic 60.0%
CTACGCGAACGCGCTCTGAT+CGG - chr8_1:76857449-76857468 Msa1215570:CDS 60.0%
CTGATTTCCCGCGGGGATTG+CGG - chr8_1:76857498-76857517 Msa1215570:CDS 60.0%
TGATTTCCCGCGGGGATTGC+GGG - chr8_1:76857499-76857518 Msa1215570:CDS 60.0%
GGTGGAAGAGCGGCGGAACT+CGG + chr8_1:76856985-76857004 None:intergenic 65.0%
CTCCGGATCAAACCTCCCGG+CGG - chr8_1:76857032-76857051 Msa1215570:three_prime_UTR 65.0%
! AGACCGCAGGCGTTGCAGTG+AGG + chr8_1:76857092-76857111 None:intergenic 65.0%
GGAAGGAGCAGAGAGACCGC+AGG + chr8_1:76857105-76857124 None:intergenic 65.0%
CGCAATCCCCGCGGGAAATC+AGG + chr8_1:76857500-76857519 None:intergenic 65.0%
GATTTCCCGCGGGGATTGCG+GGG - chr8_1:76857500-76857519 Msa1215570:CDS 65.0%
ATTTCCCGCGGGGATTGCGG+GGG - chr8_1:76857501-76857520 Msa1215570:CDS 65.0%
TTCAACCCCCGCAATCCCCG+CGG + chr8_1:76857509-76857528 None:intergenic 65.0%
CGGCGGAACTCGGCCAAGTG+GGG + chr8_1:76856975-76856994 None:intergenic 70.0%
GCGGCGGAACTCGGCCAAGT+GGG + chr8_1:76856976-76856995 None:intergenic 70.0%
AGCGGCGGAACTCGGCCAAG+TGG + chr8_1:76856977-76856996 None:intergenic 70.0%
CGCCGGGAGGTTTGATCCGG+AGG + chr8_1:76857034-76857053 None:intergenic 70.0%
GGCCGCCGGGAGGTTTGATC+CGG + chr8_1:76857037-76857056 None:intergenic 70.0%
GTGAGGATCACGGCGGAGGG+AGG + chr8_1:76857063-76857082 None:intergenic 70.0%
TCAACCCCCGCAATCCCCGC+GGG + chr8_1:76857508-76857527 None:intergenic 70.0%
GATCACGGCGGAGGGAGGCG+CGG + chr8_1:76857058-76857077 None:intergenic 75.0%
!! AGGGAGGCGCGGCCGCCGGG+AGG + chr8_1:76857047-76857066 None:intergenic 90.0%
!! CGGAGGGAGGCGCGGCCGCC+GGG + chr8_1:76857050-76857069 None:intergenic 90.0%
!! GCGGAGGGAGGCGCGGCCGC+CGG + chr8_1:76857051-76857070 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76856703 76861591 76856703 ID=Msa1215570;Name=Msa1215570
chr8_1 mRNA 76856703 76861591 76856703 ID=Msa1215570-mRNA-1;Parent=Msa1215570;Name=Msa1215570-mRNA-1;_AED=0.14;_eAED=0.14;_QI=227|0.4|0.66|1|0.8|0.66|6|494|670
chr8_1 exon 76856703 76856764 76856703 ID=Msa1215570-mRNA-1:exon:26488;Parent=Msa1215570-mRNA-1
chr8_1 exon 76856945 76858137 76856945 ID=Msa1215570-mRNA-1:exon:26487;Parent=Msa1215570-mRNA-1
chr8_1 exon 76858561 76858669 76858561 ID=Msa1215570-mRNA-1:exon:26486;Parent=Msa1215570-mRNA-1
chr8_1 exon 76859001 76859114 76859001 ID=Msa1215570-mRNA-1:exon:26485;Parent=Msa1215570-mRNA-1
chr8_1 exon 76860087 76860222 76860087 ID=Msa1215570-mRNA-1:exon:26484;Parent=Msa1215570-mRNA-1
chr8_1 exon 76860472 76861591 76860472 ID=Msa1215570-mRNA-1:exon:26483;Parent=Msa1215570-mRNA-1
chr8_1 five_prime_UTR 76861365 76861591 76861365 ID=Msa1215570-mRNA-1:five_prime_utr;Parent=Msa1215570-mRNA-1
chr8_1 CDS 76860472 76861364 76860472 ID=Msa1215570-mRNA-1:cds;Parent=Msa1215570-mRNA-1
chr8_1 CDS 76860087 76860222 76860087 ID=Msa1215570-mRNA-1:cds;Parent=Msa1215570-mRNA-1
chr8_1 CDS 76859001 76859114 76859001 ID=Msa1215570-mRNA-1:cds;Parent=Msa1215570-mRNA-1
chr8_1 CDS 76858561 76858669 76858561 ID=Msa1215570-mRNA-1:cds;Parent=Msa1215570-mRNA-1
chr8_1 CDS 76857377 76858137 76857377 ID=Msa1215570-mRNA-1:cds;Parent=Msa1215570-mRNA-1
chr8_1 three_prime_UTR 76856945 76857376 76856945 ID=Msa1215570-mRNA-1:three_prime_utr;Parent=Msa1215570-mRNA-1
chr8_1 three_prime_UTR 76856703 76856764 76856703 ID=Msa1215570-mRNA-1:three_prime_utr;Parent=Msa1215570-mRNA-1
Gene Sequence

>Msa1215570

ATGTCCTCCAAAATCAACGGTCAGATTTCACCACAACCATGTCCCCACTTGGCCGAGTTCCGCCGCTCTTCCACCAAACCATTCCTCTCCCTCCATAACTGCCTCCGGATCAAACCTCCCGGCGGCCGCGCCTCCCTCCGCCGTGATCCTCACGAAATTCCTCACTGCAACGCCTGCGGTCTCTCTGCTCCTTCCCGCCTCTATGCCTGCATCTCATGCGCCGCTGTATCATGTCACTCTTCCACCGCCGGTGTCATTTCTCACGCCGCCGCACATGCCGCATCAATGTCTCCTGGTCATCAGATCGCAATCGACGTCGATCGTGCCGAGCTTTTCTGCTGCGTTTGCCGTGATCAGGTTTACGATCGTGATTTCGACGCCGCAGTCGTGATCGCACAGACCGTTGCGTCCACAATCGGCGACGGAGAAAAATCAACAGTGATCCCTATGTCATCTACTCCGCATCCGGAGAATCTCAGAAAGCGTCGCCGAGTGGATTACCGTCCTTCAACTCCGGATCTACGCGAACGCGCTCTGATCGGAAGTTGTTCTTCTCCGATCAACGTTCCTGATTTCCCGCGGGGATTGCGGGGGTTGAACAATCTCGGAAACACTTGTTTCATGAATTCGGTGTTGCAGGCTTTGTTTCACACGCCACCGTTGAGGAATTACTTCCTGAGTGATAAGCATAATCGGTACTTTTGCCAGAAAATGAGCAATGCTGATGATGCCGCAAATGGTGATGATTCTGCCATAGCAACTGCGAAAAGAAATGGAGAGAACAATGGAACAAAAAATGGACGATTATGCTTAGCTTGTGATATGGATGCTATGTTCTCTGCTGTTTTTTCGGGAGACCGTCTTCCCTATAGCCCAGCAAAGTTCTTGTACAGTTGGTGGCAGCATGCAGCCAAGTCCAACCTTGCAAGCTATGAACAACAGGATGCACATGAATTTTTCATTTCAATGCTTGATGGGATCCATGAAAAGGTGGACAAGGATCGACGTAAGCCACACAATGAAGGTAATGGCGAGGGTTTAGGTCTCTTGCTTGTTGCCCTAGGAGTTGACATTGATCAGACAGTTAGTGCTTATTCTCAATCACACCTGTGCTATCTCGATGGTGTTAGCGGCTACCTTCCTTTCCTTGTCCTCCTTAATCTCAATCAGAAGCCCATAATTAGGACCCTGTTTGTTCCAGAATCAGTTCAGAATGTGTTTTGGACTGCACTCCTGCATAGAGGGAGTATGGGCAGCGATTGTTGTATTGCTCATAGGGTATTCTCTGGTATTTTGCGGTCAGATGTTATGTGTATGGCCTGTGGTTTCACATCAACAACTTATGACCCATGCGTAGACATCTCACTTGACTTGGAACCAAATCAAGGGGGTTCTACTAAGATGGCTGCTGCAGCTTCCAATCCTTCTTGCAATGGTGAGGCCGATTCCAGCCAAAACTTTGGGATATCTACCTTGATGGGGTGCTTGGATAGATTTACAAGAGCAGAGAAATTGGGGTCAAACCAGAAGTTTTTCTGTCAGCAGTGTAAGGTGAAGCAGGAAACTCTCAAGCAGATGTCCATAAGGAAGCTTCCCCTTGTTTCTTGCTTCCATATAAAAAGATTTGAGCACTCTTCAAGAAAAAAAATGTCAAGGAAGGTGGACCGTTATTTGCAGTTCCCATTCTCACTGGACATGTCACCTTATCTCTCATCCTCAATCTTAAGGAGTCGGTTTGGTAACAGAATATTTCCTTTTGATGGGGATGAGCCTGATGCTTCAAATGATCTATGTTCTGAGTTTGAATTGTTTGCTGTCGTCACTCACTCTGGTAAGTTAGATGCTGGTCATTATGTGACATATCTGCGATTAAGCAATCAATGGTACAAGTGTGATGATTCTTGGGTTACTCAAGTTGATGAAAACATTGTGAGGGCTGCTCAGGGTTATATGATGTTCTATGTACAGAAGATGCTTTACTATAAAGCAACTGATAAATCGGTTGCCTCATGA
Protein sequence

>Msa1215570

MSSKINGQISPQPCPHLAEFRRSSTKPFLSLHNCLRIKPPGGRASLRRDPHEIPHCNACGLSAPSRLYACISCAAVSCHSSTAGVISHAAAHAASMSPGHQIAIDVDRAELFCCVCRDQVYDRDFDAAVVIAQTVASTIGDGEKSTVIPMSSTPHPENLRKRRRVDYRPSTPDLRERALIGSCSSPINVPDFPRGLRGLNNLGNTCFMNSVLQALFHTPPLRNYFLSDKHNRYFCQKMSNADDAANGDDSAIATAKRNGENNGTKNGRLCLACDMDAMFSAVFSGDRLPYSPAKFLYSWWQHAAKSNLASYEQQDAHEFFISMLDGIHEKVDKDRRKPHNEGNGEGLGLLLVALGVDIDQTVSAYSQSHLCYLDGVSGYLPFLVLLNLNQKPIIRTLFVPESVQNVFWTALLHRGSMGSDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCVDISLDLEPNQGGSTKMAAAASNPSCNGEADSSQNFGISTLMGCLDRFTRAEKLGSNQKFFCQQCKVKQETLKQMSIRKLPLVSCFHIKRFEHSSRKKMSRKVDRYLQFPFSLDMSPYLSSSILRSRFGNRIFPFDGDEPDASNDLCSEFELFAVVTHSGKLDAGHYVTYLRLSNQWYKCDDSWVTQVDENIVRAAQGYMMFYVQKMLYYKATDKSVAS*