Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216940 | sp|Q93W28|Y4554_ARATH | 59.078 | 347 | 117 | 5 | 2 | 346 | 14 | 337 | 9.04e-127 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216940 | G7JHX1 | 95.665 | 346 | 13 | 1 | 1 | 346 | 1 | 344 | 0.0 | 616 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1216740 | Msa1216940 | 0.896636 | 3.049907e-76 | -8.615850e-47 |
| Msa1216940 | Msa1217060 | 0.864413 | 1.237992e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216940 | MtrunA17_Chr4g0066521 | 95.665 | 346 | 13 | 1 | 1 | 346 | 1 | 344 | 0.0 | 616 |
| Msa1216940 | MtrunA17_Chr2g0286841 | 63.944 | 355 | 105 | 4 | 1 | 346 | 2 | 342 | 6.44e-141 | 402 |
| Msa1216940 | MtrunA17_Chr8g0358391 | 42.693 | 349 | 163 | 8 | 7 | 345 | 20 | 341 | 9.53e-70 | 221 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216940 | AT4G15545.1 | 59.078 | 347 | 117 | 5 | 2 | 346 | 14 | 337 | 9.19e-128 | 369 |
| Msa1216940 | AT1G16520.1 | 40.286 | 350 | 168 | 6 | 8 | 346 | 6 | 325 | 3.48e-68 | 217 |
| Msa1216940 | AT1G56080.1 | 38.012 | 342 | 174 | 7 | 3 | 342 | 2 | 307 | 2.44e-65 | 209 |
Find 99 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCTCTCGTGTTTGTTTA+TGG | 0.149645 | 8_1:-79127652 | None:intergenic |
| ACTTCATATTAAAATGTTAT+TGG | 0.176959 | 8_1:-79128006 | None:intergenic |
| CGAGCAATTTGGTGCATTCT+TGG | 0.245683 | 8_1:+79127607 | Msa1216940:CDS |
| ATTGGTTCATTCAAATTTAC+AGG | 0.249309 | 8_1:-79127988 | None:intergenic |
| TACCTCTCGTGTTTGTTTAT+GGG | 0.264711 | 8_1:-79127651 | None:intergenic |
| TGATGCTACAAGGAGATTAT+AGG | 0.290719 | 8_1:-79126864 | None:intergenic |
| TGAGATGTGAAATGTAAATA+TGG | 0.306451 | 8_1:-79123728 | None:intergenic |
| GACGAGATTATCGGCGGTTT+GGG | 0.307200 | 8_1:-79124139 | None:intergenic |
| ATTTACAGGCTTTCATGTTC+AGG | 0.310673 | 8_1:-79127974 | None:intergenic |
| TTCATCTTTCTCGGCGATCT+TGG | 0.340173 | 8_1:-79124067 | None:intergenic |
| CGTTTGTCTTACGAGCAATT+TGG | 0.341040 | 8_1:+79127596 | Msa1216940:CDS |
| TTGACTTCTACGTCTCAGTA+TGG | 0.354955 | 8_1:+79125273 | Msa1216940:CDS |
| GGACGAGATTATCGGCGGTT+TGG | 0.357937 | 8_1:-79124140 | None:intergenic |
| GGCGATGAGTTCATCTTTCT+CGG | 0.359529 | 8_1:-79124076 | None:intergenic |
| TGTATTCTAGCAATAATGTT+TGG | 0.374318 | 8_1:-79125237 | None:intergenic |
| GACGCTTATGCAATCACTTC+AGG | 0.388110 | 8_1:+79124539 | Msa1216940:CDS |
| TGCATTCTTGGCAAATGTTA+AGG | 0.388169 | 8_1:+79127619 | Msa1216940:CDS |
| GATTATCGGCGGTTTGGGAT+AGG | 0.391869 | 8_1:-79124134 | None:intergenic |
| TCAAGCTCTGACTCAGTAAC+AGG | 0.399934 | 8_1:+79127067 | Msa1216940:CDS |
| TTCTGCACGGACGAGATTAT+CGG | 0.405292 | 8_1:-79124148 | None:intergenic |
| AGGAAAGATGACGGCAGAAT+CGG | 0.414185 | 8_1:+79123897 | Msa1216940:exon |
| AGGAGTTCTTTCGCCAAGTC+AGG | 0.428311 | 8_1:+79127333 | Msa1216940:CDS |
| GATGCTACAAGGAGATTATA+GGG | 0.429794 | 8_1:-79126863 | None:intergenic |
| ATTATCGGCGGTTTGGGATA+GGG | 0.431978 | 8_1:-79124133 | None:intergenic |
| TCTTCATTTGATCGTGGGGT+GGG | 0.433526 | 8_1:-79123684 | None:intergenic |
| GTCCATTGATGTTGTGCTTA+GGG | 0.444654 | 8_1:+79127840 | Msa1216940:exon |
| TCTTGAGGTTGAAAAGGAAA+TGG | 0.452117 | 8_1:-79126990 | None:intergenic |
| TGTCCATTGATGTTGTGCTT+AGG | 0.452924 | 8_1:+79127839 | Msa1216940:exon |
| GATCTATACACTGTATTTGA+GGG | 0.453264 | 8_1:+79127801 | Msa1216940:CDS |
| CTTCATTTGATCGTGGGGTG+GGG | 0.459918 | 8_1:-79123683 | None:intergenic |
| GGAAAGATGACGGCAGAATC+GGG | 0.466153 | 8_1:+79123898 | Msa1216940:exon |
| ACTTCAGGAGGATGAGGATA+AGG | 0.472683 | 8_1:+79124554 | Msa1216940:CDS |
| AGATCTATACACTGTATTTG+AGG | 0.475765 | 8_1:+79127800 | Msa1216940:CDS |
| TCCATGCCCCATGTTTCAGA+TGG | 0.476104 | 8_1:+79126601 | Msa1216940:CDS |
| TTCTTCATTTGATCGTGGGG+TGG | 0.479252 | 8_1:-79123685 | None:intergenic |
| TAGCACTTGCACGACATCCT+CGG | 0.481046 | 8_1:-79123941 | None:intergenic |
| TTCTGTTCTTCATTTGATCG+TGG | 0.484819 | 8_1:-79123690 | None:intergenic |
| TGCCCTAAGCACAACATCAA+TGG | 0.487002 | 8_1:-79127842 | None:intergenic |
| TCTGTTCTTCATTTGATCGT+GGG | 0.491511 | 8_1:-79123689 | None:intergenic |
| AAAAGGGACCTCACCTGACT+TGG | 0.492655 | 8_1:-79127346 | None:intergenic |
| CGCCCTTGAATTAGAATCAT+CGG | 0.493641 | 8_1:+79124035 | Msa1216940:CDS |
| GTTCCGATGATTCTAATTCA+AGG | 0.497436 | 8_1:-79124038 | None:intergenic |
| CGTCCGTGCAGAACAAGATA+AGG | 0.498287 | 8_1:+79124158 | Msa1216940:CDS |
| AGCACTTGCACGACATCCTC+GGG | 0.510607 | 8_1:-79123940 | None:intergenic |
| GTTTCCACCATCTGAAACAT+GGG | 0.510696 | 8_1:-79126608 | None:intergenic |
| TCGTCTTGGAGACATAGGTC+TGG | 0.521585 | 8_1:-79126963 | None:intergenic |
| AGGAGATTATAGGGCACTCT+AGG | 0.523644 | 8_1:-79126854 | None:intergenic |
| ATGCCCCATGTTTCAGATGG+TGG | 0.526341 | 8_1:+79126604 | Msa1216940:CDS |
| TGGTTCTTTGTGATGCTACA+AGG | 0.526545 | 8_1:-79126874 | None:intergenic |
| ACAGGACGTACACGGGTGGA+TGG | 0.538809 | 8_1:+79127308 | Msa1216940:intron |
| GCAATCACTTCAGGAGGATG+AGG | 0.539527 | 8_1:+79124548 | Msa1216940:CDS |
| AGTTTCCACCATCTGAAACA+TGG | 0.543260 | 8_1:-79126609 | None:intergenic |
| AAGGAAATGGAATGTCGTCT+TGG | 0.543959 | 8_1:-79126977 | None:intergenic |
| AAAGTGGGAGGAAGGAACAA+AGG | 0.550445 | 8_1:+79123872 | Msa1216940:five_prime_UTR |
| TGTGCCTCTTGAGGTTGAAA+AGG | 0.551240 | 8_1:-79126996 | None:intergenic |
| ACCATCTGAAACATGGGGCA+TGG | 0.554223 | 8_1:-79126602 | None:intergenic |
| CAAATTGCTCGTAAGACAAA+CGG | 0.554295 | 8_1:-79127595 | None:intergenic |
| TATTGAACCGCGACCTATCG+AGG | 0.558011 | 8_1:-79127044 | None:intergenic |
| CAGGACGTACACGGGTGGAT+GGG | 0.561363 | 8_1:+79127309 | Msa1216940:intron |
| ATGTGAAATGTAAATATGGC+TGG | 0.563160 | 8_1:-79123724 | None:intergenic |
| ACGTACACGGGTGGATGGGA+AGG | 0.564243 | 8_1:+79127313 | Msa1216940:CDS |
| GGGAGGAAGGAACAAAGGAA+AGG | 0.567526 | 8_1:+79123877 | Msa1216940:five_prime_UTR |
| TATGCGTCACAGGACGTACA+CGG | 0.572220 | 8_1:+79127300 | Msa1216940:intron |
| CTCAAGCTGAGACTGAAGTT+CGG | 0.572828 | 8_1:-79124097 | None:intergenic |
| GCTGAGGATCAAGAATCTGA+TGG | 0.577192 | 8_1:+79126637 | Msa1216940:CDS |
| TTCCGATGATTCTAATTCAA+GGG | 0.577493 | 8_1:-79124037 | None:intergenic |
| ATAGGTCTGGATGTTCTCGT+TGG | 0.582395 | 8_1:-79126950 | None:intergenic |
| GCTACATCGAGTTGTTCAAA+TGG | 0.590110 | 8_1:-79123973 | None:intergenic |
| CTGTTCTTCATTTGATCGTG+GGG | 0.594320 | 8_1:-79123688 | None:intergenic |
| GAATGTCGTCTTGGAGACAT+AGG | 0.596807 | 8_1:-79126968 | None:intergenic |
| TTGGGATAGGGAAACGTCGA+GGG | 0.597490 | 8_1:-79124121 | None:intergenic |
| GATACTGATGCAGAAAGACT+AGG | 0.603214 | 8_1:-79126926 | None:intergenic |
| ACACCTCGGATTACTCCCAC+TGG | 0.606495 | 8_1:+79126896 | Msa1216940:CDS |
| AAGACTAGGAGGGGAACCAG+TGG | 0.607634 | 8_1:-79126912 | None:intergenic |
| TCAGTAACAGGATCACAAGC+TGG | 0.613501 | 8_1:+79127079 | Msa1216940:CDS |
| TGATGCAGAAAGACTAGGAG+GGG | 0.614363 | 8_1:-79126921 | None:intergenic |
| GAACCTTATCTTGTTCTGCA+CGG | 0.617347 | 8_1:-79124161 | None:intergenic |
| AGACTAGGAGGGGAACCAGT+GGG | 0.617410 | 8_1:-79126911 | None:intergenic |
| AGTTGTTCAAATGGATCTGA+CGG | 0.619106 | 8_1:-79123964 | None:intergenic |
| CAAGAGGCACACATGACGAT+AGG | 0.627702 | 8_1:+79127008 | Msa1216940:CDS |
| ATCGTCATGTGTGCCTCTTG+AGG | 0.632416 | 8_1:-79127005 | None:intergenic |
| ACAAAGGAAAGGAAAGATGA+CGG | 0.640286 | 8_1:+79123888 | Msa1216940:exon |
| ACTGATGCAGAAAGACTAGG+AGG | 0.641115 | 8_1:-79126923 | None:intergenic |
| GACACGTGTCGATAAAGCAA+TGG | 0.644138 | 8_1:-79124010 | None:intergenic |
| ACTTAATCGAGATGTCTCCA+AGG | 0.645694 | 8_1:+79124339 | Msa1216940:CDS |
| ACTTCTACGTCTCAGTATGG+AGG | 0.664636 | 8_1:+79125276 | Msa1216940:CDS |
| AGTGGGAGTAATCCGAGGTG+TGG | 0.667663 | 8_1:-79126894 | None:intergenic |
| TTCCCATAAACAAACACGAG+AGG | 0.669860 | 8_1:+79127649 | Msa1216940:CDS |
| TTTGGGATAGGGAAACGTCG+AGG | 0.670982 | 8_1:-79124122 | None:intergenic |
| TTTGAACTTCGATCTTCCCG+AGG | 0.671548 | 8_1:+79123924 | Msa1216940:CDS |
| ATGCGTCACAGGACGTACAC+GGG | 0.672771 | 8_1:+79127301 | Msa1216940:intron |
| GCTTATGCAATCACTTCAGG+AGG | 0.677082 | 8_1:+79124542 | Msa1216940:CDS |
| CTGATGCAGAAAGACTAGGA+GGG | 0.680063 | 8_1:-79126922 | None:intergenic |
| GAACCAGTGGGAGTAATCCG+AGG | 0.680105 | 8_1:-79126899 | None:intergenic |
| TGCACGGACGAGATTATCGG+CGG | 0.681561 | 8_1:-79124145 | None:intergenic |
| TTTCCACCATCTGAAACATG+GGG | 0.706290 | 8_1:-79126607 | None:intergenic |
| CATCACAAAGAACCACACCT+CGG | 0.720123 | 8_1:+79126882 | Msa1216940:CDS |
| AAGATGACGGCAGAATCGGG+AGG | 0.739024 | 8_1:+79123901 | Msa1216940:exon |
| GGCATGGAAGAAGATATAGA+CGG | 0.756774 | 8_1:-79126586 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTTTATTTATTTGTTTT+CGG | + | chr8_1:79124234-79124253 | Msa1216940:intron | 10.0% |
| !! | ATAAATAAATCATAGTAAAA+CGG | - | chr8_1:79124366-79124385 | None:intergenic | 10.0% |
| !! | TTATCAATATAACTATATAA+AGG | + | chr8_1:79125526-79125545 | Msa1216940:intron | 10.0% |
| !! | AAAGAGTTAAATTTAAGAAT+GGG | - | chr8_1:79124192-79124211 | None:intergenic | 15.0% |
| !! | TAAAGAGTTAAATTTAAGAA+TGG | - | chr8_1:79124193-79124212 | None:intergenic | 15.0% |
| !! | TTATTGAAGAAAACAAAAAT+GGG | - | chr8_1:79124411-79124430 | None:intergenic | 15.0% |
| !! | TTTATTGAAGAAAACAAAAA+TGG | - | chr8_1:79124412-79124431 | None:intergenic | 15.0% |
| !!! | TTCTTTATTTAATGCTTTTT+TGG | + | chr8_1:79124605-79124624 | Msa1216940:intron | 15.0% |
| !! | TAAACTATGAAATTGATTAA+AGG | - | chr8_1:79125009-79125028 | None:intergenic | 15.0% |
| !! | TTTGTTGAAAATCATAATAA+TGG | + | chr8_1:79125651-79125670 | Msa1216940:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr8_1:79125988-79126007 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr8_1:79126115-79126134 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8_1:79126114-79126133 | Msa1216940:intron | 15.0% |
| !! | ACTTCATATTAAAATGTTAT+TGG | - | chr8_1:79128009-79128028 | None:intergenic | 15.0% |
| !!! | TCGCTATTTCTTTTTTTATT+TGG | - | chr8_1:79123759-79123778 | None:intergenic | 20.0% |
| !!! | TTTTTGGTAAAAGATTATTC+TGG | - | chr8_1:79123783-79123802 | None:intergenic | 20.0% |
| !! | GAAATAAAAAAAGAAAGAGA+AGG | + | chr8_1:79123847-79123866 | Msa1216940:five_prime_UTR | 20.0% |
| !!! | TTTTATTTATTTGTTTTCGG+TGG | + | chr8_1:79124237-79124256 | Msa1216940:intron | 20.0% |
| !! | ATTAAATGCCAATACAAAAA+TGG | - | chr8_1:79124675-79124694 | None:intergenic | 20.0% |
| !!! | ATTGACTTGTTTTTGTTTAT+TGG | - | chr8_1:79124977-79124996 | None:intergenic | 20.0% |
| !! | TAATCAATTTCATAGTTTAC+TGG | + | chr8_1:79125010-79125029 | Msa1216940:intron | 20.0% |
| !! | GTAAACTATGAAATTGATTA+AGG | - | chr8_1:79125010-79125029 | None:intergenic | 20.0% |
| !! | TAATCAATTTCATAGTTTAC+TGG | + | chr8_1:79125010-79125029 | Msa1216940:intron | 20.0% |
| !!! | GTATTTCCTTATTTAACTTT+TGG | + | chr8_1:79125183-79125202 | Msa1216940:intron | 20.0% |
| !! | TCAACAAATAGAAACATAAT+AGG | - | chr8_1:79125639-79125658 | None:intergenic | 20.0% |
| !! | ATGATAATCCATAAATTACT+TGG | + | chr8_1:79125676-79125695 | Msa1216940:intron | 20.0% |
| !! | TGATAATCCATAAATTACTT+GGG | + | chr8_1:79125677-79125696 | Msa1216940:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr8_1:79126028-79126047 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr8_1:79126105-79126124 | Msa1216940:intron | 20.0% |
| !! | AATAAGTTACTTGTATATGA+TGG | + | chr8_1:79126336-79126355 | Msa1216940:intron | 20.0% |
| !! | TGTAATATGTTTCATATATG+AGG | + | chr8_1:79126662-79126681 | Msa1216940:intron | 20.0% |
| !!! | ATTATAGTTGTTCATTTTTC+AGG | - | chr8_1:79126776-79126795 | None:intergenic | 20.0% |
| !!! | CATCTAGAAATGTTTAATTT+AGG | + | chr8_1:79127147-79127166 | Msa1216940:intron | 20.0% |
| !! | TAATGAAAACCTTCTTTATA+TGG | - | chr8_1:79127245-79127264 | None:intergenic | 20.0% |
| !!! | ATATAAAGAAGGTTTTCATT+AGG | + | chr8_1:79127244-79127263 | Msa1216940:intron | 20.0% |
| !! | TTCAAAATTTGAAGACAAAA+GGG | - | chr8_1:79127365-79127384 | None:intergenic | 20.0% |
| !! | TTTCAAAATTTGAAGACAAA+AGG | - | chr8_1:79127366-79127385 | None:intergenic | 20.0% |
| !!! | TTATTCTCTATTTTATCTCA+TGG | + | chr8_1:79127556-79127575 | Msa1216940:intron | 20.0% |
| !! | TATACAATGAAGAAAAAATG+AGG | - | chr8_1:79127918-79127937 | None:intergenic | 20.0% |
| !!! | GGAAAAAATGTTTTATTACA+CGG | - | chr8_1:79127956-79127975 | None:intergenic | 20.0% |
| ! | TGAGATGTGAAATGTAAATA+TGG | - | chr8_1:79123731-79123750 | None:intergenic | 25.0% |
| !! | ACATTCTTTTCGTGAATTTT+TGG | - | chr8_1:79123799-79123818 | None:intergenic | 25.0% |
| ! | TTAAGCAAATTCTCCTAAAA+TGG | - | chr8_1:79124286-79124305 | None:intergenic | 25.0% |
| !!! | ATTTTAGGAGAATTTGCTTA+AGG | + | chr8_1:79124285-79124304 | Msa1216940:intron | 25.0% |
| !!! | TACTACTACCATTTTTGTAT+TGG | + | chr8_1:79124664-79124683 | Msa1216940:intron | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | - | chr8_1:79124759-79124778 | None:intergenic | 25.0% |
| ! | AATAAGATGAAAACAGCTTA+TGG | + | chr8_1:79124892-79124911 | Msa1216940:intron | 25.0% |
| ! | ATAAGATGAAAACAGCTTAT+GGG | + | chr8_1:79124893-79124912 | Msa1216940:intron | 25.0% |
| ! | GAGGTTATATAAACAACTTA+TGG | - | chr8_1:79124923-79124942 | None:intergenic | 25.0% |
| !!! | GTGTTTGACTTGATTTTAAT+AGG | + | chr8_1:79125048-79125067 | Msa1216940:intron | 25.0% |
| !!! | GTGTTTGACTTGATTTTAAT+AGG | + | chr8_1:79125048-79125067 | Msa1216940:intron | 25.0% |
| ! | GAAAAGCCAAAAGTTAAATA+AGG | - | chr8_1:79125192-79125211 | None:intergenic | 25.0% |
| ! | TGTATTCTAGCAATAATGTT+TGG | - | chr8_1:79125240-79125259 | None:intergenic | 25.0% |
| ! | AGAATTTGAAGAAGCTATAT+TGG | - | chr8_1:79125491-79125510 | None:intergenic | 25.0% |
| ! | AAACAAACCCAAGTAATTTA+TGG | - | chr8_1:79125687-79125706 | None:intergenic | 25.0% |
| ! | AATTAATTATTTCCAGTGCT+GGG | + | chr8_1:79125777-79125796 | Msa1216940:intron | 25.0% |
| !! | TTGTTGTTAAAGAAAATGAG+AGG | + | chr8_1:79125859-79125878 | Msa1216940:intron | 25.0% |
| ! | ATTATTCTCTACAAGAAATG+TGG | - | chr8_1:79125903-79125922 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTGTCATTAATGT+TGG | + | chr8_1:79126250-79126269 | Msa1216940:intron | 25.0% |
| !!! | ATGCAATTATTTTTGCCAAT+CGG | + | chr8_1:79126308-79126327 | Msa1216940:intron | 25.0% |
| ! | TTGCATCCTTATGAAAAATT+AGG | + | chr8_1:79127195-79127214 | Msa1216940:intron | 25.0% |
| !! | TAAGCACCTAATTTTTCATA+AGG | - | chr8_1:79127204-79127223 | None:intergenic | 25.0% |
| ! | TTAGCTCCTCAAATAAAAAT+AGG | + | chr8_1:79127470-79127489 | Msa1216940:intron | 25.0% |
| !! | CTTTTACATATTACAGTGAA+TGG | + | chr8_1:79127498-79127517 | Msa1216940:intron | 25.0% |
| !!! | AGTGAATGGCTAATTTTTTT+GGG | + | chr8_1:79127512-79127531 | Msa1216940:intron | 25.0% |
| !!! | TTTTTTTGGGCAAATTAGAT+TGG | + | chr8_1:79127525-79127544 | Msa1216940:intron | 25.0% |
| ! | ATCTCATGGTTGTTAATATT+AGG | + | chr8_1:79127570-79127589 | Msa1216940:intron | 25.0% |
| ! | TCTATTTACTGAAAAAAGCA+TGG | - | chr8_1:79127718-79127737 | None:intergenic | 25.0% |
| !! | AAAAAGCGGATGAAATTTTT+GGG | + | chr8_1:79127766-79127785 | Msa1216940:CDS | 25.0% |
| ! | GAAAAAATGAGGTTATTATG+AGG | - | chr8_1:79127907-79127926 | None:intergenic | 25.0% |
| !! | ATTGGTTCATTCAAATTTAC+AGG | - | chr8_1:79127991-79128010 | None:intergenic | 25.0% |
| ATGTGAAATGTAAATATGGC+TGG | - | chr8_1:79123727-79123746 | None:intergenic | 30.0% | |
| AAAGAAAGAGAAGGAAAAAG+TGG | + | chr8_1:79123856-79123875 | Msa1216940:five_prime_UTR | 30.0% | |
| AAGAAAGAGAAGGAAAAAGT+GGG | + | chr8_1:79123857-79123876 | Msa1216940:five_prime_UTR | 30.0% | |
| TTCCGATGATTCTAATTCAA+GGG | - | chr8_1:79124040-79124059 | None:intergenic | 30.0% | |
| AATTGATTAAGGAAATACCC+TGG | - | chr8_1:79125090-79125109 | None:intergenic | 30.0% | |
| AGTTAAATAAGGAAATACCC+TGG | - | chr8_1:79125181-79125200 | None:intergenic | 30.0% | |
| !!! | ATTTAACTTTTGGCTTTTCC+TGG | + | chr8_1:79125193-79125212 | Msa1216940:intron | 30.0% |
| ! | TTTTCCTGGTATTTGACATA+GGG | + | chr8_1:79125207-79125226 | Msa1216940:intron | 30.0% |
| ACTCAAACAGAAATGTAATG+TGG | - | chr8_1:79125342-79125361 | None:intergenic | 30.0% | |
| TTACATTTCTGTTTGAGTCT+TGG | + | chr8_1:79125344-79125363 | Msa1216940:intron | 30.0% | |
| GAATTAATTATTTCCAGTGC+TGG | + | chr8_1:79125776-79125795 | Msa1216940:intron | 30.0% | |
| ATTAATTATTTCCAGTGCTG+GGG | + | chr8_1:79125778-79125797 | Msa1216940:intron | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8_1:79126196-79126215 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8_1:79126197-79126216 | Msa1216940:intron | 30.0% |
| ! | GAGGGAGTATATAAATTCTT+TGG | + | chr8_1:79126219-79126238 | Msa1216940:intron | 30.0% |
| GTAACTTATTAATGTCCGAT+TGG | - | chr8_1:79126326-79126345 | None:intergenic | 30.0% | |
| TTAGTTTCTGTTTACAAGAG+CGG | + | chr8_1:79126381-79126400 | Msa1216940:intron | 30.0% | |
| !!! | TTTTCATCTTCAGTTCTAAG+AGG | + | chr8_1:79126526-79126545 | Msa1216940:intron | 30.0% |
| CACTACCAAAAATGACAATT+TGG | + | chr8_1:79126725-79126744 | Msa1216940:intron | 30.0% | |
| !!! | AGACACCAAATTGTCATTTT+TGG | - | chr8_1:79126733-79126752 | None:intergenic | 30.0% |
| TGGAAAAACTAAGAAAGTTC+AGG | - | chr8_1:79126812-79126831 | None:intergenic | 30.0% | |
| ! | ATGTTTAATTTAGGTCACTC+TGG | + | chr8_1:79127156-79127175 | Msa1216940:intron | 30.0% |
| TCTTTATATGGTTGAAATGC+AGG | - | chr8_1:79127233-79127252 | None:intergenic | 30.0% | |
| GCATTTCAACCATATAAAGA+AGG | + | chr8_1:79127233-79127252 | Msa1216940:intron | 30.0% | |
| !!! | CAGTGAATGGCTAATTTTTT+TGG | + | chr8_1:79127511-79127530 | Msa1216940:intron | 30.0% |
| ! | TTTACTGAAAAAAGCATGGT+GGG | - | chr8_1:79127714-79127733 | None:intergenic | 30.0% |
| ! | ATTTACTGAAAAAAGCATGG+TGG | - | chr8_1:79127715-79127734 | None:intergenic | 30.0% |
| ! | CAAAAAGCGGATGAAATTTT+TGG | + | chr8_1:79127765-79127784 | Msa1216940:CDS | 30.0% |
| !!! | GTGTATAGATCTTTGTTTTC+AGG | - | chr8_1:79127792-79127811 | None:intergenic | 30.0% |
| AGATCTATACACTGTATTTG+AGG | + | chr8_1:79127800-79127819 | Msa1216940:CDS | 30.0% | |
| GATCTATACACTGTATTTGA+GGG | + | chr8_1:79127801-79127820 | Msa1216940:CDS | 30.0% | |
| TCTGTTCTTCATTTGATCGT+GGG | - | chr8_1:79123692-79123711 | None:intergenic | 35.0% | |
| TTCTGTTCTTCATTTGATCG+TGG | - | chr8_1:79123693-79123712 | None:intergenic | 35.0% | |
| ACAAAGGAAAGGAAAGATGA+CGG | + | chr8_1:79123888-79123907 | Msa1216940:exon | 35.0% | |
| AGTTGTTCAAATGGATCTGA+CGG | - | chr8_1:79123967-79123986 | None:intergenic | 35.0% | |
| GTTCCGATGATTCTAATTCA+AGG | - | chr8_1:79124041-79124060 | None:intergenic | 35.0% | |
| ! | CTTGCTTGATACTCCATTTT+AGG | + | chr8_1:79124270-79124289 | Msa1216940:intron | 35.0% |
| AATCATAGTAAAACGGACCT+TGG | - | chr8_1:79124359-79124378 | None:intergenic | 35.0% | |
| GGCATTTAATGAAGAGAGTT+TGG | + | chr8_1:79124685-79124704 | Msa1216940:intron | 35.0% | |
| AAGTCATCTACTGTATTTGC+CGG | - | chr8_1:79124733-79124752 | None:intergenic | 35.0% | |
| TAGATGACTTAGTCCTTGTT+TGG | + | chr8_1:79124743-79124762 | Msa1216940:intron | 35.0% | |
| AACCTATCTTAGAGAGCTTA+TGG | + | chr8_1:79124868-79124887 | Msa1216940:intron | 35.0% | |
| !! | TTCCATAAGCTCTCTAAGAT+AGG | - | chr8_1:79124873-79124892 | None:intergenic | 35.0% |
| ! | TTACTGGATTATGCTGCTTA+TGG | + | chr8_1:79125026-79125045 | Msa1216940:intron | 35.0% |
| ! | GCTAATGCTATTTGTTTCCA+GGG | + | chr8_1:79125070-79125089 | Msa1216940:intron | 35.0% |
| ! | TTACTGGATTATGCTGCTTA+TGG | + | chr8_1:79125026-79125045 | Msa1216940:intron | 35.0% |
| ! | GCTAATGCTATTTGTTTCCA+GGG | + | chr8_1:79125070-79125089 | Msa1216940:intron | 35.0% |
| ! | CTTTTCCTGGTATTTGACAT+AGG | + | chr8_1:79125206-79125225 | Msa1216940:intron | 35.0% |
| TGTAATGTGGTGACTTCTAA+GGG | - | chr8_1:79125329-79125348 | None:intergenic | 35.0% | |
| ATGTAATGTGGTGACTTCTA+AGG | - | chr8_1:79125330-79125349 | None:intergenic | 35.0% | |
| TGTAGACTGCTTTCTCATTT+AGG | + | chr8_1:79125374-79125393 | Msa1216940:intron | 35.0% | |
| ! | TCGTTTATGCAATTAGCTTC+AGG | + | chr8_1:79125414-79125433 | Msa1216940:intron | 35.0% |
| ! | CGTTTATGCAATTAGCTTCA+GGG | + | chr8_1:79125415-79125434 | Msa1216940:intron | 35.0% |
| AAACTTTGGCACATAGTTCT+AGG | + | chr8_1:79125582-79125601 | Msa1216940:intron | 35.0% | |
| ! | TGTTTCCTATCCTTTTCCTT+CGG | + | chr8_1:79125702-79125721 | Msa1216940:intron | 35.0% |
| TCTCTACAAGAAATGTGGAA+GGG | - | chr8_1:79125898-79125917 | None:intergenic | 35.0% | |
| TTCTCTACAAGAAATGTGGA+AGG | - | chr8_1:79125899-79125918 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8_1:79125962-79125981 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr8_1:79126062-79126081 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr8_1:79126066-79126085 | None:intergenic | 35.0% |
| TAGTTTCTGTTTACAAGAGC+GGG | + | chr8_1:79126382-79126401 | Msa1216940:intron | 35.0% | |
| AGTTACAGAGAGATGAATAG+AGG | + | chr8_1:79126410-79126429 | Msa1216940:intron | 35.0% | |
| GTTACAGAGAGATGAATAGA+GGG | + | chr8_1:79126411-79126430 | Msa1216940:intron | 35.0% | |
| ! | TTATATCTGCAGTGTTGGAA+TGG | - | chr8_1:79126832-79126851 | None:intergenic | 35.0% |
| GATGCTACAAGGAGATTATA+GGG | - | chr8_1:79126866-79126885 | None:intergenic | 35.0% | |
| TGATGCTACAAGGAGATTAT+AGG | - | chr8_1:79126867-79126886 | None:intergenic | 35.0% | |
| TCTTGAGGTTGAAAAGGAAA+TGG | - | chr8_1:79126993-79127012 | None:intergenic | 35.0% | |
| ! | ATTTCCTTTTCAACCTCAAG+AGG | + | chr8_1:79126992-79127011 | Msa1216940:CDS | 35.0% |
| !!! | GATGCGCCTATTTTTATTTG+AGG | - | chr8_1:79127479-79127498 | None:intergenic | 35.0% |
| ! | TTGGGCAAATTAGATTGGTT+AGG | + | chr8_1:79127530-79127549 | Msa1216940:intron | 35.0% |
| CAAATTGCTCGTAAGACAAA+CGG | - | chr8_1:79127598-79127617 | None:intergenic | 35.0% | |
| TGCATTCTTGGCAAATGTTA+AGG | + | chr8_1:79127619-79127638 | Msa1216940:CDS | 35.0% | |
| TACCTCTCGTGTTTGTTTAT+GGG | - | chr8_1:79127654-79127673 | None:intergenic | 35.0% | |
| TTACCTCTCGTGTTTGTTTA+TGG | - | chr8_1:79127655-79127674 | None:intergenic | 35.0% | |
| ATTTACAGGCTTTCATGTTC+AGG | - | chr8_1:79127977-79127996 | None:intergenic | 35.0% | |
| CTGTTCTTCATTTGATCGTG+GGG | - | chr8_1:79123691-79123710 | None:intergenic | 40.0% | |
| AAAGAGAAGGAAAAAGTGGG+AGG | + | chr8_1:79123860-79123879 | Msa1216940:five_prime_UTR | 40.0% | |
| ! | GCTACATCGAGTTGTTCAAA+TGG | - | chr8_1:79123976-79123995 | None:intergenic | 40.0% |
| CGCCCTTGAATTAGAATCAT+CGG | + | chr8_1:79124035-79124054 | Msa1216940:CDS | 40.0% | |
| GAACCTTATCTTGTTCTGCA+CGG | - | chr8_1:79124164-79124183 | None:intergenic | 40.0% | |
| ACTTAATCGAGATGTCTCCA+AGG | + | chr8_1:79124339-79124358 | Msa1216940:CDS | 40.0% | |
| ACATACATGCATGCAGTTAG+AGG | + | chr8_1:79124506-79124525 | Msa1216940:intron | 40.0% | |
| TTTGCCTCTGAGTTCAATAC+CGG | + | chr8_1:79124711-79124730 | Msa1216940:intron | 40.0% | |
| CTTGTCAGACTATTTGAGAG+AGG | - | chr8_1:79124942-79124961 | None:intergenic | 40.0% | |
| ! | GGCTAATGCTATTTGTTTCC+AGG | + | chr8_1:79125069-79125088 | Msa1216940:intron | 40.0% |
| ! | GGCTAATGCTATTTGTTTCC+AGG | + | chr8_1:79125069-79125088 | Msa1216940:intron | 40.0% |
| TTGACTTCTACGTCTCAGTA+TGG | + | chr8_1:79125273-79125292 | Msa1216940:CDS | 40.0% | |
| ATGAGAAAGCAGTCTACAGA+GGG | - | chr8_1:79125372-79125391 | None:intergenic | 40.0% | |
| AATGAGAAAGCAGTCTACAG+AGG | - | chr8_1:79125373-79125392 | None:intergenic | 40.0% | |
| !! | AATTAGCTTCAGGGTGCTTT+TGG | + | chr8_1:79125424-79125443 | Msa1216940:intron | 40.0% |
| ATGCACTTCAAGAATCTGCT+TGG | + | chr8_1:79125556-79125575 | Msa1216940:intron | 40.0% | |
| GATGCTGAATGCACATTCAA+AGG | - | chr8_1:79125617-79125636 | None:intergenic | 40.0% | |
| ! | GTTTCCTATCCTTTTCCTTC+GGG | + | chr8_1:79125703-79125722 | Msa1216940:intron | 40.0% |
| GAACATGCCAATGTCATGTT+TGG | + | chr8_1:79125725-79125744 | Msa1216940:intron | 40.0% | |
| TTCCTCTCCAAACATGACAT+TGG | - | chr8_1:79125735-79125754 | None:intergenic | 40.0% | |
| ! | AGATTTTTAAACCCCAGCAC+TGG | - | chr8_1:79125792-79125811 | None:intergenic | 40.0% |
| AATGTGGAAGGGGAAAACTT+TGG | - | chr8_1:79125887-79125906 | None:intergenic | 40.0% | |
| CTCTACAAGAAATGTGGAAG+GGG | - | chr8_1:79125897-79125916 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8_1:79126201-79126220 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr8_1:79126063-79126082 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_1:79126201-79126220 | Msa1216940:intron | 40.0% |
| CTGAAGGAGCTCAACTTTAA+TGG | - | chr8_1:79126499-79126518 | None:intergenic | 40.0% | |
| AGATGAAAAACTGCAGCTGA+AGG | - | chr8_1:79126515-79126534 | None:intergenic | 40.0% | |
| GGCATGGAAGAAGATATAGA+CGG | - | chr8_1:79126589-79126608 | None:intergenic | 40.0% | |
| ! | TTTCCACCATCTGAAACATG+GGG | - | chr8_1:79126610-79126629 | None:intergenic | 40.0% |
| ! | GTTTCCACCATCTGAAACAT+GGG | - | chr8_1:79126611-79126630 | None:intergenic | 40.0% |
| ! | AGTTTCCACCATCTGAAACA+TGG | - | chr8_1:79126612-79126631 | None:intergenic | 40.0% |
| !!! | TGGTGGAAACTTTTTTGCTG+AGG | + | chr8_1:79126621-79126640 | Msa1216940:CDS | 40.0% |
| ! | AGGTCTTATATCTGCAGTGT+TGG | - | chr8_1:79126837-79126856 | None:intergenic | 40.0% |
| TGGTTCTTTGTGATGCTACA+AGG | - | chr8_1:79126877-79126896 | None:intergenic | 40.0% | |
| GATACTGATGCAGAAAGACT+AGG | - | chr8_1:79126929-79126948 | None:intergenic | 40.0% | |
| AAGGAAATGGAATGTCGTCT+TGG | - | chr8_1:79126980-79126999 | None:intergenic | 40.0% | |
| ! | TCTTCAGTGTTTTCCTCGAT+AGG | + | chr8_1:79127031-79127050 | Msa1216940:CDS | 40.0% |
| CAATGCAACAATAGCACAGT+AGG | - | chr8_1:79127114-79127133 | None:intergenic | 40.0% | |
| CTTCTTAACTTATGCGTCAC+AGG | + | chr8_1:79127290-79127309 | Msa1216940:intron | 40.0% | |
| GAAACTTAACTTCCACTACC+AGG | + | chr8_1:79127404-79127423 | Msa1216940:intron | 40.0% | |
| GGTAGATGACACGATTTACA+AGG | + | chr8_1:79127433-79127452 | Msa1216940:intron | 40.0% | |
| AGATGACACGATTTACAAGG+CGG | + | chr8_1:79127436-79127455 | Msa1216940:intron | 40.0% | |
| CGTTTGTCTTACGAGCAATT+TGG | + | chr8_1:79127596-79127615 | Msa1216940:CDS | 40.0% | |
| TTCCCATAAACAAACACGAG+AGG | + | chr8_1:79127649-79127668 | Msa1216940:CDS | 40.0% | |
| AACACGAGAGGTAATTCATC+TGG | + | chr8_1:79127661-79127680 | Msa1216940:intron | 40.0% | |
| TAGACTGTATGCAAAACTGC+AGG | + | chr8_1:79127734-79127753 | Msa1216940:intron | 40.0% | |
| TGTCCATTGATGTTGTGCTT+AGG | + | chr8_1:79127839-79127858 | Msa1216940:exon | 40.0% | |
| GTCCATTGATGTTGTGCTTA+GGG | + | chr8_1:79127840-79127859 | Msa1216940:exon | 40.0% | |
| TTCTTCATTTGATCGTGGGG+TGG | - | chr8_1:79123688-79123707 | None:intergenic | 45.0% | |
| AGAAGGAAAAAGTGGGAGGA+AGG | + | chr8_1:79123864-79123883 | Msa1216940:five_prime_UTR | 45.0% | |
| AAAGTGGGAGGAAGGAACAA+AGG | + | chr8_1:79123872-79123891 | Msa1216940:five_prime_UTR | 45.0% | |
| ! | AGGAAAGATGACGGCAGAAT+CGG | + | chr8_1:79123897-79123916 | Msa1216940:exon | 45.0% |
| TTTGAACTTCGATCTTCCCG+AGG | + | chr8_1:79123924-79123943 | Msa1216940:CDS | 45.0% | |
| ! | GACACGTGTCGATAAAGCAA+TGG | - | chr8_1:79124013-79124032 | None:intergenic | 45.0% |
| TTCATCTTTCTCGGCGATCT+TGG | - | chr8_1:79124070-79124089 | None:intergenic | 45.0% | |
| GGCGATGAGTTCATCTTTCT+CGG | - | chr8_1:79124079-79124098 | None:intergenic | 45.0% | |
| CTCAAGCTGAGACTGAAGTT+CGG | - | chr8_1:79124100-79124119 | None:intergenic | 45.0% | |
| ! | ATTATCGGCGGTTTGGGATA+GGG | - | chr8_1:79124136-79124155 | None:intergenic | 45.0% |
| TTCTGCACGGACGAGATTAT+CGG | - | chr8_1:79124151-79124170 | None:intergenic | 45.0% | |
| GACGCTTATGCAATCACTTC+AGG | + | chr8_1:79124539-79124558 | Msa1216940:CDS | 45.0% | |
| GCTTATGCAATCACTTCAGG+AGG | + | chr8_1:79124542-79124561 | Msa1216940:CDS | 45.0% | |
| ACTTCAGGAGGATGAGGATA+AGG | + | chr8_1:79124554-79124573 | Msa1216940:CDS | 45.0% | |
| ! | TTTGCCGGTATTGAACTCAG+AGG | - | chr8_1:79124718-79124737 | None:intergenic | 45.0% |
| TCCTGGTATTTGACATAGGG+TGG | + | chr8_1:79125210-79125229 | Msa1216940:intron | 45.0% | |
| TCCACCCTATGTCAAATACC+AGG | - | chr8_1:79125214-79125233 | None:intergenic | 45.0% | |
| ACTTCTACGTCTCAGTATGG+AGG | + | chr8_1:79125276-79125295 | Msa1216940:CDS | 45.0% | |
| ! | AATGTGGTGACTTCTAAGGG+AGG | - | chr8_1:79125326-79125345 | None:intergenic | 45.0% |
| CACTTCAAGAATCTGCTTGG+CGG | + | chr8_1:79125559-79125578 | Msa1216940:intron | 45.0% | |
| AATCTGCTTGGCGGAAACTT+TGG | + | chr8_1:79125568-79125587 | Msa1216940:intron | 45.0% | |
| TGTTCCCGAAGGAAAAGGAT+AGG | - | chr8_1:79125710-79125729 | None:intergenic | 45.0% | |
| TGCCAATGTCATGTTTGGAG+AGG | + | chr8_1:79125730-79125749 | Msa1216940:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8_1:79126200-79126219 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_1:79126200-79126219 | Msa1216940:intron | 45.0% |
| TTTCTGTTTACAAGAGCGGG+AGG | + | chr8_1:79126385-79126404 | Msa1216940:intron | 45.0% | |
| AAGAGCAGGAGAGACGAATA+TGG | - | chr8_1:79126467-79126486 | None:intergenic | 45.0% | |
| TCTCTCCTGCTCTTACAAAC+AGG | + | chr8_1:79126473-79126492 | Msa1216940:intron | 45.0% | |
| AATGGCCTGTTTGTAAGAGC+AGG | - | chr8_1:79126481-79126500 | None:intergenic | 45.0% | |
| GCTGAGGATCAAGAATCTGA+TGG | + | chr8_1:79126637-79126656 | Msa1216940:CDS | 45.0% | |
| ! | AGGAGATTATAGGGCACTCT+AGG | - | chr8_1:79126857-79126876 | None:intergenic | 45.0% |
| CATCACAAAGAACCACACCT+CGG | + | chr8_1:79126882-79126901 | Msa1216940:CDS | 45.0% | |
| TGATGCAGAAAGACTAGGAG+GGG | - | chr8_1:79126924-79126943 | None:intergenic | 45.0% | |
| CTGATGCAGAAAGACTAGGA+GGG | - | chr8_1:79126925-79126944 | None:intergenic | 45.0% | |
| ACTGATGCAGAAAGACTAGG+AGG | - | chr8_1:79126926-79126945 | None:intergenic | 45.0% | |
| ATAGGTCTGGATGTTCTCGT+TGG | - | chr8_1:79126953-79126972 | None:intergenic | 45.0% | |
| GAATGTCGTCTTGGAGACAT+AGG | - | chr8_1:79126971-79126990 | None:intergenic | 45.0% | |
| TGTGCCTCTTGAGGTTGAAA+AGG | - | chr8_1:79126999-79127018 | None:intergenic | 45.0% | |
| ! | TCAAGCTCTGACTCAGTAAC+AGG | + | chr8_1:79127067-79127086 | Msa1216940:CDS | 45.0% |
| TCAGTAACAGGATCACAAGC+TGG | + | chr8_1:79127079-79127098 | Msa1216940:CDS | 45.0% | |
| GCAACAATAGCACAGTAGGA+AGG | - | chr8_1:79127110-79127129 | None:intergenic | 45.0% | |
| !! | CGAGCAATTTGGTGCATTCT+TGG | + | chr8_1:79127607-79127626 | Msa1216940:CDS | 45.0% |
| GGAGAGGATAAGAGGAAACA+AGG | - | chr8_1:79127693-79127712 | None:intergenic | 45.0% | |
| ! | TGAAAAAAGCATGGTGGGAG+AGG | - | chr8_1:79127709-79127728 | None:intergenic | 45.0% |
| GCAGGTGACTCTACAAAAAG+CGG | + | chr8_1:79127752-79127771 | Msa1216940:intron | 45.0% | |
| TGCCCTAAGCACAACATCAA+TGG | - | chr8_1:79127845-79127864 | None:intergenic | 45.0% | |
| GGGAGGAAGGAACAAAGGAA+AGG | + | chr8_1:79123877-79123896 | Msa1216940:five_prime_UTR | 50.0% | |
| ! | GGAAAGATGACGGCAGAATC+GGG | + | chr8_1:79123898-79123917 | Msa1216940:exon | 50.0% |
| TAGCACTTGCACGACATCCT+CGG | - | chr8_1:79123944-79123963 | None:intergenic | 50.0% | |
| TTGGGATAGGGAAACGTCGA+GGG | - | chr8_1:79124124-79124143 | None:intergenic | 50.0% | |
| ! | TTTGGGATAGGGAAACGTCG+AGG | - | chr8_1:79124125-79124144 | None:intergenic | 50.0% |
| ! | GATTATCGGCGGTTTGGGAT+AGG | - | chr8_1:79124137-79124156 | None:intergenic | 50.0% |
| GACGAGATTATCGGCGGTTT+GGG | - | chr8_1:79124142-79124161 | None:intergenic | 50.0% | |
| CGTCCGTGCAGAACAAGATA+AGG | + | chr8_1:79124158-79124177 | Msa1216940:CDS | 50.0% | |
| GCAATCACTTCAGGAGGATG+AGG | + | chr8_1:79124548-79124567 | Msa1216940:CDS | 50.0% | |
| ! | TGGTGACTTCTAAGGGAGGA+TGG | - | chr8_1:79125322-79125341 | None:intergenic | 50.0% |
| TGGCATGTTCCCGAAGGAAA+AGG | - | chr8_1:79125715-79125734 | None:intergenic | 50.0% | |
| TGACATTGGCATGTTCCCGA+AGG | - | chr8_1:79125721-79125740 | None:intergenic | 50.0% | |
| AGGAGAGACGAATATGGAGG+GGG | - | chr8_1:79126461-79126480 | None:intergenic | 50.0% | |
| CAGGAGAGACGAATATGGAG+GGG | - | chr8_1:79126462-79126481 | None:intergenic | 50.0% | |
| GCAGGAGAGACGAATATGGA+GGG | - | chr8_1:79126463-79126482 | None:intergenic | 50.0% | |
| AGCAGGAGAGACGAATATGG+AGG | - | chr8_1:79126464-79126483 | None:intergenic | 50.0% | |
| TCCATGCCCCATGTTTCAGA+TGG | + | chr8_1:79126601-79126620 | Msa1216940:CDS | 50.0% | |
| ! | ACCATCTGAAACATGGGGCA+TGG | - | chr8_1:79126605-79126624 | None:intergenic | 50.0% |
| ATGCCCCATGTTTCAGATGG+TGG | + | chr8_1:79126604-79126623 | Msa1216940:CDS | 50.0% | |
| TCGTCTTGGAGACATAGGTC+TGG | - | chr8_1:79126966-79126985 | None:intergenic | 50.0% | |
| ATCGTCATGTGTGCCTCTTG+AGG | - | chr8_1:79127008-79127027 | None:intergenic | 50.0% | |
| ! | CAAGAGGCACACATGACGAT+AGG | + | chr8_1:79127008-79127027 | Msa1216940:CDS | 50.0% |
| ! | GTGTTTTCCTCGATAGGTCG+CGG | + | chr8_1:79127037-79127056 | Msa1216940:CDS | 50.0% |
| TATTGAACCGCGACCTATCG+AGG | - | chr8_1:79127047-79127066 | None:intergenic | 50.0% | |
| TATGCGTCACAGGACGTACA+CGG | + | chr8_1:79127300-79127319 | Msa1216940:intron | 50.0% | |
| AGGAGTTCTTTCGCCAAGTC+AGG | + | chr8_1:79127333-79127352 | Msa1216940:CDS | 50.0% | |
| TTCTTTCGCCAAGTCAGGTG+AGG | + | chr8_1:79127338-79127357 | Msa1216940:intron | 50.0% | |
| AAAAGGGACCTCACCTGACT+TGG | - | chr8_1:79127349-79127368 | None:intergenic | 50.0% | |
| ACTTCCACTACCAGGAACGT+CGG | + | chr8_1:79127412-79127431 | Msa1216940:intron | 50.0% | |
| ! | AAGATGACGGCAGAATCGGG+AGG | + | chr8_1:79123901-79123920 | Msa1216940:exon | 55.0% |
| AGCACTTGCACGACATCCTC+GGG | - | chr8_1:79123943-79123962 | None:intergenic | 55.0% | |
| GGACGAGATTATCGGCGGTT+TGG | - | chr8_1:79124143-79124162 | None:intergenic | 55.0% | |
| TGCACGGACGAGATTATCGG+CGG | - | chr8_1:79124148-79124167 | None:intergenic | 55.0% | |
| AGTGGGAGTAATCCGAGGTG+TGG | - | chr8_1:79126897-79126916 | None:intergenic | 55.0% | |
| ACACCTCGGATTACTCCCAC+TGG | + | chr8_1:79126896-79126915 | Msa1216940:CDS | 55.0% | |
| GAACCAGTGGGAGTAATCCG+AGG | - | chr8_1:79126902-79126921 | None:intergenic | 55.0% | |
| AGACTAGGAGGGGAACCAGT+GGG | - | chr8_1:79126914-79126933 | None:intergenic | 55.0% | |
| AAGACTAGGAGGGGAACCAG+TGG | - | chr8_1:79126915-79126934 | None:intergenic | 55.0% | |
| ATGCGTCACAGGACGTACAC+GGG | + | chr8_1:79127301-79127320 | Msa1216940:intron | 55.0% | |
| TCTACCGACGTTCCTGGTAG+TGG | - | chr8_1:79127419-79127438 | None:intergenic | 55.0% | |
| GTGTCATCTACCGACGTTCC+TGG | - | chr8_1:79127425-79127444 | None:intergenic | 55.0% | |
| ! | GCATGGTGGGAGAGGATAAG+AGG | - | chr8_1:79127701-79127720 | None:intergenic | 55.0% |
| ACAGGACGTACACGGGTGGA+TGG | + | chr8_1:79127308-79127327 | Msa1216940:intron | 60.0% | |
| CAGGACGTACACGGGTGGAT+GGG | + | chr8_1:79127309-79127328 | Msa1216940:intron | 60.0% | |
| ACGTACACGGGTGGATGGGA+AGG | + | chr8_1:79127313-79127332 | Msa1216940:CDS | 60.0% | |
| CGTCACAGGACGTACACGGG+TGG | + | chr8_1:79127304-79127323 | Msa1216940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 79123685 | 79128059 | 79123685 | ID=Msa1216940;Name=Msa1216940 |
| chr8_1 | mRNA | 79123685 | 79128059 | 79123685 | ID=Msa1216940-mRNA-1;Parent=Msa1216940;Name=Msa1216940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=184|1|1|1|0.88|0.8|10|211|346 |
| chr8_1 | exon | 79123685 | 79123802 | 79123685 | ID=Msa1216940-mRNA-1:exon:27412;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79123838 | 79124179 | 79123838 | ID=Msa1216940-mRNA-1:exon:27413;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79124292 | 79124360 | 79124292 | ID=Msa1216940-mRNA-1:exon:27414;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79124522 | 79124584 | 79124522 | ID=Msa1216940-mRNA-1:exon:27415;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79125228 | 79125297 | 79125228 | ID=Msa1216940-mRNA-1:exon:27416;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79126566 | 79126658 | 79126566 | ID=Msa1216940-mRNA-1:exon:27417;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79126846 | 79127100 | 79126846 | ID=Msa1216940-mRNA-1:exon:27418;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79127312 | 79127354 | 79127312 | ID=Msa1216940-mRNA-1:exon:27419;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79127592 | 79127670 | 79127592 | ID=Msa1216940-mRNA-1:exon:27420;Parent=Msa1216940-mRNA-1 |
| chr8_1 | exon | 79127756 | 79128059 | 79127756 | ID=Msa1216940-mRNA-1:exon:27421;Parent=Msa1216940-mRNA-1 |
| chr8_1 | five_prime_UTR | 79123685 | 79123802 | 79123685 | ID=Msa1216940-mRNA-1:five_prime_utr;Parent=Msa1216940-mRNA-1 |
| chr8_1 | five_prime_UTR | 79123838 | 79123903 | 79123838 | ID=Msa1216940-mRNA-1:five_prime_utr;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79123904 | 79124179 | 79123904 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79124292 | 79124360 | 79124292 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79124522 | 79124584 | 79124522 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79125228 | 79125297 | 79125228 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79126566 | 79126658 | 79126566 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79126846 | 79127100 | 79126846 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79127312 | 79127354 | 79127312 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79127592 | 79127670 | 79127592 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | CDS | 79127756 | 79127848 | 79127756 | ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1 |
| chr8_1 | three_prime_UTR | 79127849 | 79128059 | 79127849 | ID=Msa1216940-mRNA-1:three_prime_utr;Parent=Msa1216940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
