AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1216940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216940 MtrunA17_Chr4g0066521 95.665 346 13 1 1 346 1 344 0.0 616
Msa1216940 MtrunA17_Chr2g0286841 63.944 355 105 4 1 346 2 342 6.44e-141 402
Msa1216940 MtrunA17_Chr8g0358391 42.693 349 163 8 7 345 20 341 9.53e-70 221
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1216940 AT4G15545.1 59.078 347 117 5 2 346 14 337 9.19e-128 369
Msa1216940 AT1G16520.1 40.286 350 168 6 8 346 6 325 3.48e-68 217
Msa1216940 AT1G56080.1 38.012 342 174 7 3 342 2 307 2.44e-65 209

Find 99 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACCTCTCGTGTTTGTTTA+TGG 0.149645 8_1:-79127652 None:intergenic
ACTTCATATTAAAATGTTAT+TGG 0.176959 8_1:-79128006 None:intergenic
CGAGCAATTTGGTGCATTCT+TGG 0.245683 8_1:+79127607 Msa1216940:CDS
ATTGGTTCATTCAAATTTAC+AGG 0.249309 8_1:-79127988 None:intergenic
TACCTCTCGTGTTTGTTTAT+GGG 0.264711 8_1:-79127651 None:intergenic
TGATGCTACAAGGAGATTAT+AGG 0.290719 8_1:-79126864 None:intergenic
TGAGATGTGAAATGTAAATA+TGG 0.306451 8_1:-79123728 None:intergenic
GACGAGATTATCGGCGGTTT+GGG 0.307200 8_1:-79124139 None:intergenic
ATTTACAGGCTTTCATGTTC+AGG 0.310673 8_1:-79127974 None:intergenic
TTCATCTTTCTCGGCGATCT+TGG 0.340173 8_1:-79124067 None:intergenic
CGTTTGTCTTACGAGCAATT+TGG 0.341040 8_1:+79127596 Msa1216940:CDS
TTGACTTCTACGTCTCAGTA+TGG 0.354955 8_1:+79125273 Msa1216940:CDS
GGACGAGATTATCGGCGGTT+TGG 0.357937 8_1:-79124140 None:intergenic
GGCGATGAGTTCATCTTTCT+CGG 0.359529 8_1:-79124076 None:intergenic
TGTATTCTAGCAATAATGTT+TGG 0.374318 8_1:-79125237 None:intergenic
GACGCTTATGCAATCACTTC+AGG 0.388110 8_1:+79124539 Msa1216940:CDS
TGCATTCTTGGCAAATGTTA+AGG 0.388169 8_1:+79127619 Msa1216940:CDS
GATTATCGGCGGTTTGGGAT+AGG 0.391869 8_1:-79124134 None:intergenic
TCAAGCTCTGACTCAGTAAC+AGG 0.399934 8_1:+79127067 Msa1216940:CDS
TTCTGCACGGACGAGATTAT+CGG 0.405292 8_1:-79124148 None:intergenic
AGGAAAGATGACGGCAGAAT+CGG 0.414185 8_1:+79123897 Msa1216940:exon
AGGAGTTCTTTCGCCAAGTC+AGG 0.428311 8_1:+79127333 Msa1216940:CDS
GATGCTACAAGGAGATTATA+GGG 0.429794 8_1:-79126863 None:intergenic
ATTATCGGCGGTTTGGGATA+GGG 0.431978 8_1:-79124133 None:intergenic
TCTTCATTTGATCGTGGGGT+GGG 0.433526 8_1:-79123684 None:intergenic
GTCCATTGATGTTGTGCTTA+GGG 0.444654 8_1:+79127840 Msa1216940:exon
TCTTGAGGTTGAAAAGGAAA+TGG 0.452117 8_1:-79126990 None:intergenic
TGTCCATTGATGTTGTGCTT+AGG 0.452924 8_1:+79127839 Msa1216940:exon
GATCTATACACTGTATTTGA+GGG 0.453264 8_1:+79127801 Msa1216940:CDS
CTTCATTTGATCGTGGGGTG+GGG 0.459918 8_1:-79123683 None:intergenic
GGAAAGATGACGGCAGAATC+GGG 0.466153 8_1:+79123898 Msa1216940:exon
ACTTCAGGAGGATGAGGATA+AGG 0.472683 8_1:+79124554 Msa1216940:CDS
AGATCTATACACTGTATTTG+AGG 0.475765 8_1:+79127800 Msa1216940:CDS
TCCATGCCCCATGTTTCAGA+TGG 0.476104 8_1:+79126601 Msa1216940:CDS
TTCTTCATTTGATCGTGGGG+TGG 0.479252 8_1:-79123685 None:intergenic
TAGCACTTGCACGACATCCT+CGG 0.481046 8_1:-79123941 None:intergenic
TTCTGTTCTTCATTTGATCG+TGG 0.484819 8_1:-79123690 None:intergenic
TGCCCTAAGCACAACATCAA+TGG 0.487002 8_1:-79127842 None:intergenic
TCTGTTCTTCATTTGATCGT+GGG 0.491511 8_1:-79123689 None:intergenic
AAAAGGGACCTCACCTGACT+TGG 0.492655 8_1:-79127346 None:intergenic
CGCCCTTGAATTAGAATCAT+CGG 0.493641 8_1:+79124035 Msa1216940:CDS
GTTCCGATGATTCTAATTCA+AGG 0.497436 8_1:-79124038 None:intergenic
CGTCCGTGCAGAACAAGATA+AGG 0.498287 8_1:+79124158 Msa1216940:CDS
AGCACTTGCACGACATCCTC+GGG 0.510607 8_1:-79123940 None:intergenic
GTTTCCACCATCTGAAACAT+GGG 0.510696 8_1:-79126608 None:intergenic
TCGTCTTGGAGACATAGGTC+TGG 0.521585 8_1:-79126963 None:intergenic
AGGAGATTATAGGGCACTCT+AGG 0.523644 8_1:-79126854 None:intergenic
ATGCCCCATGTTTCAGATGG+TGG 0.526341 8_1:+79126604 Msa1216940:CDS
TGGTTCTTTGTGATGCTACA+AGG 0.526545 8_1:-79126874 None:intergenic
ACAGGACGTACACGGGTGGA+TGG 0.538809 8_1:+79127308 Msa1216940:intron
GCAATCACTTCAGGAGGATG+AGG 0.539527 8_1:+79124548 Msa1216940:CDS
AGTTTCCACCATCTGAAACA+TGG 0.543260 8_1:-79126609 None:intergenic
AAGGAAATGGAATGTCGTCT+TGG 0.543959 8_1:-79126977 None:intergenic
AAAGTGGGAGGAAGGAACAA+AGG 0.550445 8_1:+79123872 Msa1216940:five_prime_UTR
TGTGCCTCTTGAGGTTGAAA+AGG 0.551240 8_1:-79126996 None:intergenic
ACCATCTGAAACATGGGGCA+TGG 0.554223 8_1:-79126602 None:intergenic
CAAATTGCTCGTAAGACAAA+CGG 0.554295 8_1:-79127595 None:intergenic
TATTGAACCGCGACCTATCG+AGG 0.558011 8_1:-79127044 None:intergenic
CAGGACGTACACGGGTGGAT+GGG 0.561363 8_1:+79127309 Msa1216940:intron
ATGTGAAATGTAAATATGGC+TGG 0.563160 8_1:-79123724 None:intergenic
ACGTACACGGGTGGATGGGA+AGG 0.564243 8_1:+79127313 Msa1216940:CDS
GGGAGGAAGGAACAAAGGAA+AGG 0.567526 8_1:+79123877 Msa1216940:five_prime_UTR
TATGCGTCACAGGACGTACA+CGG 0.572220 8_1:+79127300 Msa1216940:intron
CTCAAGCTGAGACTGAAGTT+CGG 0.572828 8_1:-79124097 None:intergenic
GCTGAGGATCAAGAATCTGA+TGG 0.577192 8_1:+79126637 Msa1216940:CDS
TTCCGATGATTCTAATTCAA+GGG 0.577493 8_1:-79124037 None:intergenic
ATAGGTCTGGATGTTCTCGT+TGG 0.582395 8_1:-79126950 None:intergenic
GCTACATCGAGTTGTTCAAA+TGG 0.590110 8_1:-79123973 None:intergenic
CTGTTCTTCATTTGATCGTG+GGG 0.594320 8_1:-79123688 None:intergenic
GAATGTCGTCTTGGAGACAT+AGG 0.596807 8_1:-79126968 None:intergenic
TTGGGATAGGGAAACGTCGA+GGG 0.597490 8_1:-79124121 None:intergenic
GATACTGATGCAGAAAGACT+AGG 0.603214 8_1:-79126926 None:intergenic
ACACCTCGGATTACTCCCAC+TGG 0.606495 8_1:+79126896 Msa1216940:CDS
AAGACTAGGAGGGGAACCAG+TGG 0.607634 8_1:-79126912 None:intergenic
TCAGTAACAGGATCACAAGC+TGG 0.613501 8_1:+79127079 Msa1216940:CDS
TGATGCAGAAAGACTAGGAG+GGG 0.614363 8_1:-79126921 None:intergenic
GAACCTTATCTTGTTCTGCA+CGG 0.617347 8_1:-79124161 None:intergenic
AGACTAGGAGGGGAACCAGT+GGG 0.617410 8_1:-79126911 None:intergenic
AGTTGTTCAAATGGATCTGA+CGG 0.619106 8_1:-79123964 None:intergenic
CAAGAGGCACACATGACGAT+AGG 0.627702 8_1:+79127008 Msa1216940:CDS
ATCGTCATGTGTGCCTCTTG+AGG 0.632416 8_1:-79127005 None:intergenic
ACAAAGGAAAGGAAAGATGA+CGG 0.640286 8_1:+79123888 Msa1216940:exon
ACTGATGCAGAAAGACTAGG+AGG 0.641115 8_1:-79126923 None:intergenic
GACACGTGTCGATAAAGCAA+TGG 0.644138 8_1:-79124010 None:intergenic
ACTTAATCGAGATGTCTCCA+AGG 0.645694 8_1:+79124339 Msa1216940:CDS
ACTTCTACGTCTCAGTATGG+AGG 0.664636 8_1:+79125276 Msa1216940:CDS
AGTGGGAGTAATCCGAGGTG+TGG 0.667663 8_1:-79126894 None:intergenic
TTCCCATAAACAAACACGAG+AGG 0.669860 8_1:+79127649 Msa1216940:CDS
TTTGGGATAGGGAAACGTCG+AGG 0.670982 8_1:-79124122 None:intergenic
TTTGAACTTCGATCTTCCCG+AGG 0.671548 8_1:+79123924 Msa1216940:CDS
ATGCGTCACAGGACGTACAC+GGG 0.672771 8_1:+79127301 Msa1216940:intron
GCTTATGCAATCACTTCAGG+AGG 0.677082 8_1:+79124542 Msa1216940:CDS
CTGATGCAGAAAGACTAGGA+GGG 0.680063 8_1:-79126922 None:intergenic
GAACCAGTGGGAGTAATCCG+AGG 0.680105 8_1:-79126899 None:intergenic
TGCACGGACGAGATTATCGG+CGG 0.681561 8_1:-79124145 None:intergenic
TTTCCACCATCTGAAACATG+GGG 0.706290 8_1:-79126607 None:intergenic
CATCACAAAGAACCACACCT+CGG 0.720123 8_1:+79126882 Msa1216940:CDS
AAGATGACGGCAGAATCGGG+AGG 0.739024 8_1:+79123901 Msa1216940:exon
GGCATGGAAGAAGATATAGA+CGG 0.756774 8_1:-79126586 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTATTTTATTTATTTGTTTT+CGG + chr8_1:79124234-79124253 Msa1216940:intron 10.0%
!! ATAAATAAATCATAGTAAAA+CGG - chr8_1:79124366-79124385 None:intergenic 10.0%
!! TTATCAATATAACTATATAA+AGG + chr8_1:79125526-79125545 Msa1216940:intron 10.0%
!! AAAGAGTTAAATTTAAGAAT+GGG - chr8_1:79124192-79124211 None:intergenic 15.0%
!! TAAAGAGTTAAATTTAAGAA+TGG - chr8_1:79124193-79124212 None:intergenic 15.0%
!! TTATTGAAGAAAACAAAAAT+GGG - chr8_1:79124411-79124430 None:intergenic 15.0%
!! TTTATTGAAGAAAACAAAAA+TGG - chr8_1:79124412-79124431 None:intergenic 15.0%
!!! TTCTTTATTTAATGCTTTTT+TGG + chr8_1:79124605-79124624 Msa1216940:intron 15.0%
!! TAAACTATGAAATTGATTAA+AGG - chr8_1:79125009-79125028 None:intergenic 15.0%
!! TTTGTTGAAAATCATAATAA+TGG + chr8_1:79125651-79125670 Msa1216940:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr8_1:79125988-79126007 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr8_1:79126115-79126134 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr8_1:79126114-79126133 Msa1216940:intron 15.0%
!! ACTTCATATTAAAATGTTAT+TGG - chr8_1:79128009-79128028 None:intergenic 15.0%
!!! TCGCTATTTCTTTTTTTATT+TGG - chr8_1:79123759-79123778 None:intergenic 20.0%
!!! TTTTTGGTAAAAGATTATTC+TGG - chr8_1:79123783-79123802 None:intergenic 20.0%
!! GAAATAAAAAAAGAAAGAGA+AGG + chr8_1:79123847-79123866 Msa1216940:five_prime_UTR 20.0%
!!! TTTTATTTATTTGTTTTCGG+TGG + chr8_1:79124237-79124256 Msa1216940:intron 20.0%
!! ATTAAATGCCAATACAAAAA+TGG - chr8_1:79124675-79124694 None:intergenic 20.0%
!!! ATTGACTTGTTTTTGTTTAT+TGG - chr8_1:79124977-79124996 None:intergenic 20.0%
!! TAATCAATTTCATAGTTTAC+TGG + chr8_1:79125010-79125029 Msa1216940:intron 20.0%
!! GTAAACTATGAAATTGATTA+AGG - chr8_1:79125010-79125029 None:intergenic 20.0%
!! TAATCAATTTCATAGTTTAC+TGG + chr8_1:79125010-79125029 Msa1216940:intron 20.0%
!!! GTATTTCCTTATTTAACTTT+TGG + chr8_1:79125183-79125202 Msa1216940:intron 20.0%
!! TCAACAAATAGAAACATAAT+AGG - chr8_1:79125639-79125658 None:intergenic 20.0%
!! ATGATAATCCATAAATTACT+TGG + chr8_1:79125676-79125695 Msa1216940:intron 20.0%
!! TGATAATCCATAAATTACTT+GGG + chr8_1:79125677-79125696 Msa1216940:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr8_1:79126028-79126047 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr8_1:79126105-79126124 Msa1216940:intron 20.0%
!! AATAAGTTACTTGTATATGA+TGG + chr8_1:79126336-79126355 Msa1216940:intron 20.0%
!! TGTAATATGTTTCATATATG+AGG + chr8_1:79126662-79126681 Msa1216940:intron 20.0%
!!! ATTATAGTTGTTCATTTTTC+AGG - chr8_1:79126776-79126795 None:intergenic 20.0%
!!! CATCTAGAAATGTTTAATTT+AGG + chr8_1:79127147-79127166 Msa1216940:intron 20.0%
!! TAATGAAAACCTTCTTTATA+TGG - chr8_1:79127245-79127264 None:intergenic 20.0%
!!! ATATAAAGAAGGTTTTCATT+AGG + chr8_1:79127244-79127263 Msa1216940:intron 20.0%
!! TTCAAAATTTGAAGACAAAA+GGG - chr8_1:79127365-79127384 None:intergenic 20.0%
!! TTTCAAAATTTGAAGACAAA+AGG - chr8_1:79127366-79127385 None:intergenic 20.0%
!!! TTATTCTCTATTTTATCTCA+TGG + chr8_1:79127556-79127575 Msa1216940:intron 20.0%
!! TATACAATGAAGAAAAAATG+AGG - chr8_1:79127918-79127937 None:intergenic 20.0%
!!! GGAAAAAATGTTTTATTACA+CGG - chr8_1:79127956-79127975 None:intergenic 20.0%
! TGAGATGTGAAATGTAAATA+TGG - chr8_1:79123731-79123750 None:intergenic 25.0%
!! ACATTCTTTTCGTGAATTTT+TGG - chr8_1:79123799-79123818 None:intergenic 25.0%
! TTAAGCAAATTCTCCTAAAA+TGG - chr8_1:79124286-79124305 None:intergenic 25.0%
!!! ATTTTAGGAGAATTTGCTTA+AGG + chr8_1:79124285-79124304 Msa1216940:intron 25.0%
!!! TACTACTACCATTTTTGTAT+TGG + chr8_1:79124664-79124683 Msa1216940:intron 25.0%
! TTAAGCTATTTATCCAAACA+AGG - chr8_1:79124759-79124778 None:intergenic 25.0%
! AATAAGATGAAAACAGCTTA+TGG + chr8_1:79124892-79124911 Msa1216940:intron 25.0%
! ATAAGATGAAAACAGCTTAT+GGG + chr8_1:79124893-79124912 Msa1216940:intron 25.0%
! GAGGTTATATAAACAACTTA+TGG - chr8_1:79124923-79124942 None:intergenic 25.0%
!!! GTGTTTGACTTGATTTTAAT+AGG + chr8_1:79125048-79125067 Msa1216940:intron 25.0%
!!! GTGTTTGACTTGATTTTAAT+AGG + chr8_1:79125048-79125067 Msa1216940:intron 25.0%
! GAAAAGCCAAAAGTTAAATA+AGG - chr8_1:79125192-79125211 None:intergenic 25.0%
! TGTATTCTAGCAATAATGTT+TGG - chr8_1:79125240-79125259 None:intergenic 25.0%
! AGAATTTGAAGAAGCTATAT+TGG - chr8_1:79125491-79125510 None:intergenic 25.0%
! AAACAAACCCAAGTAATTTA+TGG - chr8_1:79125687-79125706 None:intergenic 25.0%
! AATTAATTATTTCCAGTGCT+GGG + chr8_1:79125777-79125796 Msa1216940:intron 25.0%
!! TTGTTGTTAAAGAAAATGAG+AGG + chr8_1:79125859-79125878 Msa1216940:intron 25.0%
! ATTATTCTCTACAAGAAATG+TGG - chr8_1:79125903-79125922 None:intergenic 25.0%
!!! TCTAGTTTTGTCATTAATGT+TGG + chr8_1:79126250-79126269 Msa1216940:intron 25.0%
!!! ATGCAATTATTTTTGCCAAT+CGG + chr8_1:79126308-79126327 Msa1216940:intron 25.0%
! TTGCATCCTTATGAAAAATT+AGG + chr8_1:79127195-79127214 Msa1216940:intron 25.0%
!! TAAGCACCTAATTTTTCATA+AGG - chr8_1:79127204-79127223 None:intergenic 25.0%
! TTAGCTCCTCAAATAAAAAT+AGG + chr8_1:79127470-79127489 Msa1216940:intron 25.0%
!! CTTTTACATATTACAGTGAA+TGG + chr8_1:79127498-79127517 Msa1216940:intron 25.0%
!!! AGTGAATGGCTAATTTTTTT+GGG + chr8_1:79127512-79127531 Msa1216940:intron 25.0%
!!! TTTTTTTGGGCAAATTAGAT+TGG + chr8_1:79127525-79127544 Msa1216940:intron 25.0%
! ATCTCATGGTTGTTAATATT+AGG + chr8_1:79127570-79127589 Msa1216940:intron 25.0%
! TCTATTTACTGAAAAAAGCA+TGG - chr8_1:79127718-79127737 None:intergenic 25.0%
!! AAAAAGCGGATGAAATTTTT+GGG + chr8_1:79127766-79127785 Msa1216940:CDS 25.0%
! GAAAAAATGAGGTTATTATG+AGG - chr8_1:79127907-79127926 None:intergenic 25.0%
!! ATTGGTTCATTCAAATTTAC+AGG - chr8_1:79127991-79128010 None:intergenic 25.0%
ATGTGAAATGTAAATATGGC+TGG - chr8_1:79123727-79123746 None:intergenic 30.0%
AAAGAAAGAGAAGGAAAAAG+TGG + chr8_1:79123856-79123875 Msa1216940:five_prime_UTR 30.0%
AAGAAAGAGAAGGAAAAAGT+GGG + chr8_1:79123857-79123876 Msa1216940:five_prime_UTR 30.0%
TTCCGATGATTCTAATTCAA+GGG - chr8_1:79124040-79124059 None:intergenic 30.0%
AATTGATTAAGGAAATACCC+TGG - chr8_1:79125090-79125109 None:intergenic 30.0%
AGTTAAATAAGGAAATACCC+TGG - chr8_1:79125181-79125200 None:intergenic 30.0%
!!! ATTTAACTTTTGGCTTTTCC+TGG + chr8_1:79125193-79125212 Msa1216940:intron 30.0%
! TTTTCCTGGTATTTGACATA+GGG + chr8_1:79125207-79125226 Msa1216940:intron 30.0%
ACTCAAACAGAAATGTAATG+TGG - chr8_1:79125342-79125361 None:intergenic 30.0%
TTACATTTCTGTTTGAGTCT+TGG + chr8_1:79125344-79125363 Msa1216940:intron 30.0%
GAATTAATTATTTCCAGTGC+TGG + chr8_1:79125776-79125795 Msa1216940:intron 30.0%
ATTAATTATTTCCAGTGCTG+GGG + chr8_1:79125778-79125797 Msa1216940:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr8_1:79126196-79126215 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr8_1:79126197-79126216 Msa1216940:intron 30.0%
! GAGGGAGTATATAAATTCTT+TGG + chr8_1:79126219-79126238 Msa1216940:intron 30.0%
GTAACTTATTAATGTCCGAT+TGG - chr8_1:79126326-79126345 None:intergenic 30.0%
TTAGTTTCTGTTTACAAGAG+CGG + chr8_1:79126381-79126400 Msa1216940:intron 30.0%
!!! TTTTCATCTTCAGTTCTAAG+AGG + chr8_1:79126526-79126545 Msa1216940:intron 30.0%
CACTACCAAAAATGACAATT+TGG + chr8_1:79126725-79126744 Msa1216940:intron 30.0%
!!! AGACACCAAATTGTCATTTT+TGG - chr8_1:79126733-79126752 None:intergenic 30.0%
TGGAAAAACTAAGAAAGTTC+AGG - chr8_1:79126812-79126831 None:intergenic 30.0%
! ATGTTTAATTTAGGTCACTC+TGG + chr8_1:79127156-79127175 Msa1216940:intron 30.0%
TCTTTATATGGTTGAAATGC+AGG - chr8_1:79127233-79127252 None:intergenic 30.0%
GCATTTCAACCATATAAAGA+AGG + chr8_1:79127233-79127252 Msa1216940:intron 30.0%
!!! CAGTGAATGGCTAATTTTTT+TGG + chr8_1:79127511-79127530 Msa1216940:intron 30.0%
! TTTACTGAAAAAAGCATGGT+GGG - chr8_1:79127714-79127733 None:intergenic 30.0%
! ATTTACTGAAAAAAGCATGG+TGG - chr8_1:79127715-79127734 None:intergenic 30.0%
! CAAAAAGCGGATGAAATTTT+TGG + chr8_1:79127765-79127784 Msa1216940:CDS 30.0%
!!! GTGTATAGATCTTTGTTTTC+AGG - chr8_1:79127792-79127811 None:intergenic 30.0%
AGATCTATACACTGTATTTG+AGG + chr8_1:79127800-79127819 Msa1216940:CDS 30.0%
GATCTATACACTGTATTTGA+GGG + chr8_1:79127801-79127820 Msa1216940:CDS 30.0%
TCTGTTCTTCATTTGATCGT+GGG - chr8_1:79123692-79123711 None:intergenic 35.0%
TTCTGTTCTTCATTTGATCG+TGG - chr8_1:79123693-79123712 None:intergenic 35.0%
ACAAAGGAAAGGAAAGATGA+CGG + chr8_1:79123888-79123907 Msa1216940:exon 35.0%
AGTTGTTCAAATGGATCTGA+CGG - chr8_1:79123967-79123986 None:intergenic 35.0%
GTTCCGATGATTCTAATTCA+AGG - chr8_1:79124041-79124060 None:intergenic 35.0%
! CTTGCTTGATACTCCATTTT+AGG + chr8_1:79124270-79124289 Msa1216940:intron 35.0%
AATCATAGTAAAACGGACCT+TGG - chr8_1:79124359-79124378 None:intergenic 35.0%
GGCATTTAATGAAGAGAGTT+TGG + chr8_1:79124685-79124704 Msa1216940:intron 35.0%
AAGTCATCTACTGTATTTGC+CGG - chr8_1:79124733-79124752 None:intergenic 35.0%
TAGATGACTTAGTCCTTGTT+TGG + chr8_1:79124743-79124762 Msa1216940:intron 35.0%
AACCTATCTTAGAGAGCTTA+TGG + chr8_1:79124868-79124887 Msa1216940:intron 35.0%
!! TTCCATAAGCTCTCTAAGAT+AGG - chr8_1:79124873-79124892 None:intergenic 35.0%
! TTACTGGATTATGCTGCTTA+TGG + chr8_1:79125026-79125045 Msa1216940:intron 35.0%
! GCTAATGCTATTTGTTTCCA+GGG + chr8_1:79125070-79125089 Msa1216940:intron 35.0%
! TTACTGGATTATGCTGCTTA+TGG + chr8_1:79125026-79125045 Msa1216940:intron 35.0%
! GCTAATGCTATTTGTTTCCA+GGG + chr8_1:79125070-79125089 Msa1216940:intron 35.0%
! CTTTTCCTGGTATTTGACAT+AGG + chr8_1:79125206-79125225 Msa1216940:intron 35.0%
TGTAATGTGGTGACTTCTAA+GGG - chr8_1:79125329-79125348 None:intergenic 35.0%
ATGTAATGTGGTGACTTCTA+AGG - chr8_1:79125330-79125349 None:intergenic 35.0%
TGTAGACTGCTTTCTCATTT+AGG + chr8_1:79125374-79125393 Msa1216940:intron 35.0%
! TCGTTTATGCAATTAGCTTC+AGG + chr8_1:79125414-79125433 Msa1216940:intron 35.0%
! CGTTTATGCAATTAGCTTCA+GGG + chr8_1:79125415-79125434 Msa1216940:intron 35.0%
AAACTTTGGCACATAGTTCT+AGG + chr8_1:79125582-79125601 Msa1216940:intron 35.0%
! TGTTTCCTATCCTTTTCCTT+CGG + chr8_1:79125702-79125721 Msa1216940:intron 35.0%
TCTCTACAAGAAATGTGGAA+GGG - chr8_1:79125898-79125917 None:intergenic 35.0%
TTCTCTACAAGAAATGTGGA+AGG - chr8_1:79125899-79125918 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr8_1:79125962-79125981 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr8_1:79126062-79126081 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr8_1:79126066-79126085 None:intergenic 35.0%
TAGTTTCTGTTTACAAGAGC+GGG + chr8_1:79126382-79126401 Msa1216940:intron 35.0%
AGTTACAGAGAGATGAATAG+AGG + chr8_1:79126410-79126429 Msa1216940:intron 35.0%
GTTACAGAGAGATGAATAGA+GGG + chr8_1:79126411-79126430 Msa1216940:intron 35.0%
! TTATATCTGCAGTGTTGGAA+TGG - chr8_1:79126832-79126851 None:intergenic 35.0%
GATGCTACAAGGAGATTATA+GGG - chr8_1:79126866-79126885 None:intergenic 35.0%
TGATGCTACAAGGAGATTAT+AGG - chr8_1:79126867-79126886 None:intergenic 35.0%
TCTTGAGGTTGAAAAGGAAA+TGG - chr8_1:79126993-79127012 None:intergenic 35.0%
! ATTTCCTTTTCAACCTCAAG+AGG + chr8_1:79126992-79127011 Msa1216940:CDS 35.0%
!!! GATGCGCCTATTTTTATTTG+AGG - chr8_1:79127479-79127498 None:intergenic 35.0%
! TTGGGCAAATTAGATTGGTT+AGG + chr8_1:79127530-79127549 Msa1216940:intron 35.0%
CAAATTGCTCGTAAGACAAA+CGG - chr8_1:79127598-79127617 None:intergenic 35.0%
TGCATTCTTGGCAAATGTTA+AGG + chr8_1:79127619-79127638 Msa1216940:CDS 35.0%
TACCTCTCGTGTTTGTTTAT+GGG - chr8_1:79127654-79127673 None:intergenic 35.0%
TTACCTCTCGTGTTTGTTTA+TGG - chr8_1:79127655-79127674 None:intergenic 35.0%
ATTTACAGGCTTTCATGTTC+AGG - chr8_1:79127977-79127996 None:intergenic 35.0%
CTGTTCTTCATTTGATCGTG+GGG - chr8_1:79123691-79123710 None:intergenic 40.0%
AAAGAGAAGGAAAAAGTGGG+AGG + chr8_1:79123860-79123879 Msa1216940:five_prime_UTR 40.0%
! GCTACATCGAGTTGTTCAAA+TGG - chr8_1:79123976-79123995 None:intergenic 40.0%
CGCCCTTGAATTAGAATCAT+CGG + chr8_1:79124035-79124054 Msa1216940:CDS 40.0%
GAACCTTATCTTGTTCTGCA+CGG - chr8_1:79124164-79124183 None:intergenic 40.0%
ACTTAATCGAGATGTCTCCA+AGG + chr8_1:79124339-79124358 Msa1216940:CDS 40.0%
ACATACATGCATGCAGTTAG+AGG + chr8_1:79124506-79124525 Msa1216940:intron 40.0%
TTTGCCTCTGAGTTCAATAC+CGG + chr8_1:79124711-79124730 Msa1216940:intron 40.0%
CTTGTCAGACTATTTGAGAG+AGG - chr8_1:79124942-79124961 None:intergenic 40.0%
! GGCTAATGCTATTTGTTTCC+AGG + chr8_1:79125069-79125088 Msa1216940:intron 40.0%
! GGCTAATGCTATTTGTTTCC+AGG + chr8_1:79125069-79125088 Msa1216940:intron 40.0%
TTGACTTCTACGTCTCAGTA+TGG + chr8_1:79125273-79125292 Msa1216940:CDS 40.0%
ATGAGAAAGCAGTCTACAGA+GGG - chr8_1:79125372-79125391 None:intergenic 40.0%
AATGAGAAAGCAGTCTACAG+AGG - chr8_1:79125373-79125392 None:intergenic 40.0%
!! AATTAGCTTCAGGGTGCTTT+TGG + chr8_1:79125424-79125443 Msa1216940:intron 40.0%
ATGCACTTCAAGAATCTGCT+TGG + chr8_1:79125556-79125575 Msa1216940:intron 40.0%
GATGCTGAATGCACATTCAA+AGG - chr8_1:79125617-79125636 None:intergenic 40.0%
! GTTTCCTATCCTTTTCCTTC+GGG + chr8_1:79125703-79125722 Msa1216940:intron 40.0%
GAACATGCCAATGTCATGTT+TGG + chr8_1:79125725-79125744 Msa1216940:intron 40.0%
TTCCTCTCCAAACATGACAT+TGG - chr8_1:79125735-79125754 None:intergenic 40.0%
! AGATTTTTAAACCCCAGCAC+TGG - chr8_1:79125792-79125811 None:intergenic 40.0%
AATGTGGAAGGGGAAAACTT+TGG - chr8_1:79125887-79125906 None:intergenic 40.0%
CTCTACAAGAAATGTGGAAG+GGG - chr8_1:79125897-79125916 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_1:79126201-79126220 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr8_1:79126063-79126082 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_1:79126201-79126220 Msa1216940:intron 40.0%
CTGAAGGAGCTCAACTTTAA+TGG - chr8_1:79126499-79126518 None:intergenic 40.0%
AGATGAAAAACTGCAGCTGA+AGG - chr8_1:79126515-79126534 None:intergenic 40.0%
GGCATGGAAGAAGATATAGA+CGG - chr8_1:79126589-79126608 None:intergenic 40.0%
! TTTCCACCATCTGAAACATG+GGG - chr8_1:79126610-79126629 None:intergenic 40.0%
! GTTTCCACCATCTGAAACAT+GGG - chr8_1:79126611-79126630 None:intergenic 40.0%
! AGTTTCCACCATCTGAAACA+TGG - chr8_1:79126612-79126631 None:intergenic 40.0%
!!! TGGTGGAAACTTTTTTGCTG+AGG + chr8_1:79126621-79126640 Msa1216940:CDS 40.0%
! AGGTCTTATATCTGCAGTGT+TGG - chr8_1:79126837-79126856 None:intergenic 40.0%
TGGTTCTTTGTGATGCTACA+AGG - chr8_1:79126877-79126896 None:intergenic 40.0%
GATACTGATGCAGAAAGACT+AGG - chr8_1:79126929-79126948 None:intergenic 40.0%
AAGGAAATGGAATGTCGTCT+TGG - chr8_1:79126980-79126999 None:intergenic 40.0%
! TCTTCAGTGTTTTCCTCGAT+AGG + chr8_1:79127031-79127050 Msa1216940:CDS 40.0%
CAATGCAACAATAGCACAGT+AGG - chr8_1:79127114-79127133 None:intergenic 40.0%
CTTCTTAACTTATGCGTCAC+AGG + chr8_1:79127290-79127309 Msa1216940:intron 40.0%
GAAACTTAACTTCCACTACC+AGG + chr8_1:79127404-79127423 Msa1216940:intron 40.0%
GGTAGATGACACGATTTACA+AGG + chr8_1:79127433-79127452 Msa1216940:intron 40.0%
AGATGACACGATTTACAAGG+CGG + chr8_1:79127436-79127455 Msa1216940:intron 40.0%
CGTTTGTCTTACGAGCAATT+TGG + chr8_1:79127596-79127615 Msa1216940:CDS 40.0%
TTCCCATAAACAAACACGAG+AGG + chr8_1:79127649-79127668 Msa1216940:CDS 40.0%
AACACGAGAGGTAATTCATC+TGG + chr8_1:79127661-79127680 Msa1216940:intron 40.0%
TAGACTGTATGCAAAACTGC+AGG + chr8_1:79127734-79127753 Msa1216940:intron 40.0%
TGTCCATTGATGTTGTGCTT+AGG + chr8_1:79127839-79127858 Msa1216940:exon 40.0%
GTCCATTGATGTTGTGCTTA+GGG + chr8_1:79127840-79127859 Msa1216940:exon 40.0%
TTCTTCATTTGATCGTGGGG+TGG - chr8_1:79123688-79123707 None:intergenic 45.0%
AGAAGGAAAAAGTGGGAGGA+AGG + chr8_1:79123864-79123883 Msa1216940:five_prime_UTR 45.0%
AAAGTGGGAGGAAGGAACAA+AGG + chr8_1:79123872-79123891 Msa1216940:five_prime_UTR 45.0%
! AGGAAAGATGACGGCAGAAT+CGG + chr8_1:79123897-79123916 Msa1216940:exon 45.0%
TTTGAACTTCGATCTTCCCG+AGG + chr8_1:79123924-79123943 Msa1216940:CDS 45.0%
! GACACGTGTCGATAAAGCAA+TGG - chr8_1:79124013-79124032 None:intergenic 45.0%
TTCATCTTTCTCGGCGATCT+TGG - chr8_1:79124070-79124089 None:intergenic 45.0%
GGCGATGAGTTCATCTTTCT+CGG - chr8_1:79124079-79124098 None:intergenic 45.0%
CTCAAGCTGAGACTGAAGTT+CGG - chr8_1:79124100-79124119 None:intergenic 45.0%
! ATTATCGGCGGTTTGGGATA+GGG - chr8_1:79124136-79124155 None:intergenic 45.0%
TTCTGCACGGACGAGATTAT+CGG - chr8_1:79124151-79124170 None:intergenic 45.0%
GACGCTTATGCAATCACTTC+AGG + chr8_1:79124539-79124558 Msa1216940:CDS 45.0%
GCTTATGCAATCACTTCAGG+AGG + chr8_1:79124542-79124561 Msa1216940:CDS 45.0%
ACTTCAGGAGGATGAGGATA+AGG + chr8_1:79124554-79124573 Msa1216940:CDS 45.0%
! TTTGCCGGTATTGAACTCAG+AGG - chr8_1:79124718-79124737 None:intergenic 45.0%
TCCTGGTATTTGACATAGGG+TGG + chr8_1:79125210-79125229 Msa1216940:intron 45.0%
TCCACCCTATGTCAAATACC+AGG - chr8_1:79125214-79125233 None:intergenic 45.0%
ACTTCTACGTCTCAGTATGG+AGG + chr8_1:79125276-79125295 Msa1216940:CDS 45.0%
! AATGTGGTGACTTCTAAGGG+AGG - chr8_1:79125326-79125345 None:intergenic 45.0%
CACTTCAAGAATCTGCTTGG+CGG + chr8_1:79125559-79125578 Msa1216940:intron 45.0%
AATCTGCTTGGCGGAAACTT+TGG + chr8_1:79125568-79125587 Msa1216940:intron 45.0%
TGTTCCCGAAGGAAAAGGAT+AGG - chr8_1:79125710-79125729 None:intergenic 45.0%
TGCCAATGTCATGTTTGGAG+AGG + chr8_1:79125730-79125749 Msa1216940:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_1:79126200-79126219 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_1:79126200-79126219 Msa1216940:intron 45.0%
TTTCTGTTTACAAGAGCGGG+AGG + chr8_1:79126385-79126404 Msa1216940:intron 45.0%
AAGAGCAGGAGAGACGAATA+TGG - chr8_1:79126467-79126486 None:intergenic 45.0%
TCTCTCCTGCTCTTACAAAC+AGG + chr8_1:79126473-79126492 Msa1216940:intron 45.0%
AATGGCCTGTTTGTAAGAGC+AGG - chr8_1:79126481-79126500 None:intergenic 45.0%
GCTGAGGATCAAGAATCTGA+TGG + chr8_1:79126637-79126656 Msa1216940:CDS 45.0%
! AGGAGATTATAGGGCACTCT+AGG - chr8_1:79126857-79126876 None:intergenic 45.0%
CATCACAAAGAACCACACCT+CGG + chr8_1:79126882-79126901 Msa1216940:CDS 45.0%
TGATGCAGAAAGACTAGGAG+GGG - chr8_1:79126924-79126943 None:intergenic 45.0%
CTGATGCAGAAAGACTAGGA+GGG - chr8_1:79126925-79126944 None:intergenic 45.0%
ACTGATGCAGAAAGACTAGG+AGG - chr8_1:79126926-79126945 None:intergenic 45.0%
ATAGGTCTGGATGTTCTCGT+TGG - chr8_1:79126953-79126972 None:intergenic 45.0%
GAATGTCGTCTTGGAGACAT+AGG - chr8_1:79126971-79126990 None:intergenic 45.0%
TGTGCCTCTTGAGGTTGAAA+AGG - chr8_1:79126999-79127018 None:intergenic 45.0%
! TCAAGCTCTGACTCAGTAAC+AGG + chr8_1:79127067-79127086 Msa1216940:CDS 45.0%
TCAGTAACAGGATCACAAGC+TGG + chr8_1:79127079-79127098 Msa1216940:CDS 45.0%
GCAACAATAGCACAGTAGGA+AGG - chr8_1:79127110-79127129 None:intergenic 45.0%
!! CGAGCAATTTGGTGCATTCT+TGG + chr8_1:79127607-79127626 Msa1216940:CDS 45.0%
GGAGAGGATAAGAGGAAACA+AGG - chr8_1:79127693-79127712 None:intergenic 45.0%
! TGAAAAAAGCATGGTGGGAG+AGG - chr8_1:79127709-79127728 None:intergenic 45.0%
GCAGGTGACTCTACAAAAAG+CGG + chr8_1:79127752-79127771 Msa1216940:intron 45.0%
TGCCCTAAGCACAACATCAA+TGG - chr8_1:79127845-79127864 None:intergenic 45.0%
GGGAGGAAGGAACAAAGGAA+AGG + chr8_1:79123877-79123896 Msa1216940:five_prime_UTR 50.0%
! GGAAAGATGACGGCAGAATC+GGG + chr8_1:79123898-79123917 Msa1216940:exon 50.0%
TAGCACTTGCACGACATCCT+CGG - chr8_1:79123944-79123963 None:intergenic 50.0%
TTGGGATAGGGAAACGTCGA+GGG - chr8_1:79124124-79124143 None:intergenic 50.0%
! TTTGGGATAGGGAAACGTCG+AGG - chr8_1:79124125-79124144 None:intergenic 50.0%
! GATTATCGGCGGTTTGGGAT+AGG - chr8_1:79124137-79124156 None:intergenic 50.0%
GACGAGATTATCGGCGGTTT+GGG - chr8_1:79124142-79124161 None:intergenic 50.0%
CGTCCGTGCAGAACAAGATA+AGG + chr8_1:79124158-79124177 Msa1216940:CDS 50.0%
GCAATCACTTCAGGAGGATG+AGG + chr8_1:79124548-79124567 Msa1216940:CDS 50.0%
! TGGTGACTTCTAAGGGAGGA+TGG - chr8_1:79125322-79125341 None:intergenic 50.0%
TGGCATGTTCCCGAAGGAAA+AGG - chr8_1:79125715-79125734 None:intergenic 50.0%
TGACATTGGCATGTTCCCGA+AGG - chr8_1:79125721-79125740 None:intergenic 50.0%
AGGAGAGACGAATATGGAGG+GGG - chr8_1:79126461-79126480 None:intergenic 50.0%
CAGGAGAGACGAATATGGAG+GGG - chr8_1:79126462-79126481 None:intergenic 50.0%
GCAGGAGAGACGAATATGGA+GGG - chr8_1:79126463-79126482 None:intergenic 50.0%
AGCAGGAGAGACGAATATGG+AGG - chr8_1:79126464-79126483 None:intergenic 50.0%
TCCATGCCCCATGTTTCAGA+TGG + chr8_1:79126601-79126620 Msa1216940:CDS 50.0%
! ACCATCTGAAACATGGGGCA+TGG - chr8_1:79126605-79126624 None:intergenic 50.0%
ATGCCCCATGTTTCAGATGG+TGG + chr8_1:79126604-79126623 Msa1216940:CDS 50.0%
TCGTCTTGGAGACATAGGTC+TGG - chr8_1:79126966-79126985 None:intergenic 50.0%
ATCGTCATGTGTGCCTCTTG+AGG - chr8_1:79127008-79127027 None:intergenic 50.0%
! CAAGAGGCACACATGACGAT+AGG + chr8_1:79127008-79127027 Msa1216940:CDS 50.0%
! GTGTTTTCCTCGATAGGTCG+CGG + chr8_1:79127037-79127056 Msa1216940:CDS 50.0%
TATTGAACCGCGACCTATCG+AGG - chr8_1:79127047-79127066 None:intergenic 50.0%
TATGCGTCACAGGACGTACA+CGG + chr8_1:79127300-79127319 Msa1216940:intron 50.0%
AGGAGTTCTTTCGCCAAGTC+AGG + chr8_1:79127333-79127352 Msa1216940:CDS 50.0%
TTCTTTCGCCAAGTCAGGTG+AGG + chr8_1:79127338-79127357 Msa1216940:intron 50.0%
AAAAGGGACCTCACCTGACT+TGG - chr8_1:79127349-79127368 None:intergenic 50.0%
ACTTCCACTACCAGGAACGT+CGG + chr8_1:79127412-79127431 Msa1216940:intron 50.0%
! AAGATGACGGCAGAATCGGG+AGG + chr8_1:79123901-79123920 Msa1216940:exon 55.0%
AGCACTTGCACGACATCCTC+GGG - chr8_1:79123943-79123962 None:intergenic 55.0%
GGACGAGATTATCGGCGGTT+TGG - chr8_1:79124143-79124162 None:intergenic 55.0%
TGCACGGACGAGATTATCGG+CGG - chr8_1:79124148-79124167 None:intergenic 55.0%
AGTGGGAGTAATCCGAGGTG+TGG - chr8_1:79126897-79126916 None:intergenic 55.0%
ACACCTCGGATTACTCCCAC+TGG + chr8_1:79126896-79126915 Msa1216940:CDS 55.0%
GAACCAGTGGGAGTAATCCG+AGG - chr8_1:79126902-79126921 None:intergenic 55.0%
AGACTAGGAGGGGAACCAGT+GGG - chr8_1:79126914-79126933 None:intergenic 55.0%
AAGACTAGGAGGGGAACCAG+TGG - chr8_1:79126915-79126934 None:intergenic 55.0%
ATGCGTCACAGGACGTACAC+GGG + chr8_1:79127301-79127320 Msa1216940:intron 55.0%
TCTACCGACGTTCCTGGTAG+TGG - chr8_1:79127419-79127438 None:intergenic 55.0%
GTGTCATCTACCGACGTTCC+TGG - chr8_1:79127425-79127444 None:intergenic 55.0%
! GCATGGTGGGAGAGGATAAG+AGG - chr8_1:79127701-79127720 None:intergenic 55.0%
ACAGGACGTACACGGGTGGA+TGG + chr8_1:79127308-79127327 Msa1216940:intron 60.0%
CAGGACGTACACGGGTGGAT+GGG + chr8_1:79127309-79127328 Msa1216940:intron 60.0%
ACGTACACGGGTGGATGGGA+AGG + chr8_1:79127313-79127332 Msa1216940:CDS 60.0%
CGTCACAGGACGTACACGGG+TGG + chr8_1:79127304-79127323 Msa1216940:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 79123685 79128059 79123685 ID=Msa1216940;Name=Msa1216940
chr8_1 mRNA 79123685 79128059 79123685 ID=Msa1216940-mRNA-1;Parent=Msa1216940;Name=Msa1216940-mRNA-1;_AED=0.04;_eAED=0.04;_QI=184|1|1|1|0.88|0.8|10|211|346
chr8_1 exon 79123685 79123802 79123685 ID=Msa1216940-mRNA-1:exon:27412;Parent=Msa1216940-mRNA-1
chr8_1 exon 79123838 79124179 79123838 ID=Msa1216940-mRNA-1:exon:27413;Parent=Msa1216940-mRNA-1
chr8_1 exon 79124292 79124360 79124292 ID=Msa1216940-mRNA-1:exon:27414;Parent=Msa1216940-mRNA-1
chr8_1 exon 79124522 79124584 79124522 ID=Msa1216940-mRNA-1:exon:27415;Parent=Msa1216940-mRNA-1
chr8_1 exon 79125228 79125297 79125228 ID=Msa1216940-mRNA-1:exon:27416;Parent=Msa1216940-mRNA-1
chr8_1 exon 79126566 79126658 79126566 ID=Msa1216940-mRNA-1:exon:27417;Parent=Msa1216940-mRNA-1
chr8_1 exon 79126846 79127100 79126846 ID=Msa1216940-mRNA-1:exon:27418;Parent=Msa1216940-mRNA-1
chr8_1 exon 79127312 79127354 79127312 ID=Msa1216940-mRNA-1:exon:27419;Parent=Msa1216940-mRNA-1
chr8_1 exon 79127592 79127670 79127592 ID=Msa1216940-mRNA-1:exon:27420;Parent=Msa1216940-mRNA-1
chr8_1 exon 79127756 79128059 79127756 ID=Msa1216940-mRNA-1:exon:27421;Parent=Msa1216940-mRNA-1
chr8_1 five_prime_UTR 79123685 79123802 79123685 ID=Msa1216940-mRNA-1:five_prime_utr;Parent=Msa1216940-mRNA-1
chr8_1 five_prime_UTR 79123838 79123903 79123838 ID=Msa1216940-mRNA-1:five_prime_utr;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79123904 79124179 79123904 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79124292 79124360 79124292 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79124522 79124584 79124522 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79125228 79125297 79125228 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79126566 79126658 79126566 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79126846 79127100 79126846 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79127312 79127354 79127312 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79127592 79127670 79127592 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 CDS 79127756 79127848 79127756 ID=Msa1216940-mRNA-1:cds;Parent=Msa1216940-mRNA-1
chr8_1 three_prime_UTR 79127849 79128059 79127849 ID=Msa1216940-mRNA-1:three_prime_utr;Parent=Msa1216940-mRNA-1
Gene Sequence

>Msa1216940

ATGACGGCAGAATCGGGAGGTTTGAACTTCGATCTTCCCGAGGATGTCGTGCAAGTGCTACCGTCAGATCCATTTGAACAACTCGATGTAGCGCGCAAGATCACATCCATTGCTTTATCGACACGTGTCAACGCCCTTGAATTAGAATCATCGGAACTTCGCGCCAAGATCGCCGAGAAAGATGAACTCATCGCCGAACTTCAGTCTCAGCTTGAGTCCCTCGACGTTTCCCTATCCCAAACCGCCGATAATCTCGTCCGTGCAGAACAAGATAAGGAGAATTTGCTTAAGGAGAATGCTTCGCTTTCAAACACTGTCAGAAAACTTAATCGAGATGTCTCCAAGTTAGAGGTTTTCAGAAAGACGCTTATGCAATCACTTCAGGAGGATGAGGATAAGGATAATTCTGGTGGAGCTCCAAACATTATTGCTAGAATACAGAGTCAATCAAGTTTGACTTCTACGTCTCAGTATGGAGATAATGACGCATCATTTCAACCGTCTATATCTTCTTCCATGCCCCATGTTTCAGATGGTGGAAACTTTTTTGCTGAGGATCAAGAATCTGATGATATAAGACCTAGAGTGCCCTATAATCTCCTTGTAGCATCACAAAGAACCACACCTCGGATTACTCCCACTGGTTCCCCTCCTAGTCTTTCTGCATCAGTATCTCCAACGAGAACATCCAGACCTATGTCTCCAAGACGACATTCCATTTCCTTTTCAACCTCAAGAGGCACACATGACGATAGGTCTTCAGTGTTTTCCTCGATAGGTCGCGGTTCAATATCAAGCTCTGACTCAGTAACAGGATCACAAGCTGGACGTACACGGGTGGATGGGAAGGAGTTCTTTCGCCAAGTCAGGAACCGTTTGTCTTACGAGCAATTTGGTGCATTCTTGGCAAATGTTAAGGAGCTAAATTCCCATAAACAAACACGAGAGGTGACTCTACAAAAAGCGGATGAAATTTTTGGGCCTGAAAACAAAGATCTATACACTGTATTTGAGGGATTGATCACACGCAATGTCCATTGA

Protein sequence

>Msa1216940

MTAESGGLNFDLPEDVVQVLPSDPFEQLDVARKITSIALSTRVNALELESSELRAKIAEKDELIAELQSQLESLDVSLSQTADNLVRAEQDKENLLKENASLSNTVRKLNRDVSKLEVFRKTLMQSLQEDEDKDNSGGAPNIIARIQSQSSLTSTSQYGDNDASFQPSISSSMPHVSDGGNFFAEDQESDDIRPRVPYNLLVASQRTTPRITPTGSPPSLSASVSPTRTSRPMSPRRHSISFSTSRGTHDDRSSVFSSIGRGSISSSDSVTGSQAGRTRVDGKEFFRQVRNRLSYEQFGAFLANVKELNSHKQTREVTLQKADEIFGPENKDLYTVFEGLITRNVH*