AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1219890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219890 MtrunA17_Chr4g0070391 96.301 757 23 3 1 753 1 756 0.0 1489
Msa1219890 MtrunA17_Chr2g0300751 66.921 786 218 9 1 753 1 777 0.0 1048
Msa1219890 MtrunA17_Chr4g0053781 52.233 739 329 12 26 750 28 756 0.0 738
Msa1219890 MtrunA17_Chr5g0401511 50.715 769 353 14 1 752 5 764 0.0 733
Msa1219890 MtrunA17_Chr1g0204321 48.210 782 358 12 1 750 12 778 0.0 733
Msa1219890 MtrunA17_Chr4g0037221 50.490 715 328 11 53 749 62 768 0.0 707
Msa1219890 MtrunA17_Chr1g0152771 49.354 774 360 10 1 751 1 765 0.0 707
Msa1219890 MtrunA17_Chr4g0020651 51.181 762 344 15 10 752 8 760 0.0 703
Msa1219890 MtrunA17_Chr8g0344331 49.670 757 334 17 27 751 36 777 0.0 702
Msa1219890 MtrunA17_Chr3g0134621 51.235 769 311 16 8 751 9 738 0.0 690
Msa1219890 MtrunA17_Chr8g0344971 46.005 776 363 14 9 749 6 760 0.0 646
Msa1219890 MtrunA17_Chr7g0262161 46.854 747 363 13 28 750 26 762 0.0 641
Msa1219890 MtrunA17_Chr7g0246461 44.757 782 347 19 8 750 6 741 0.0 600
Msa1219890 MtrunA17_Chr3g0120521 43.636 715 369 16 49 746 70 767 0.0 572
Msa1219890 MtrunA17_Chr4g0057061 45.265 718 357 16 41 751 89 777 0.0 567
Msa1219890 MtrunA17_Chr5g0407701 41.688 770 402 15 1 746 1 747 0.0 559
Msa1219890 MtrunA17_Chr5g0398351 44.593 749 358 17 25 750 792 1506 0.0 559
Msa1219890 MtrunA17_Chr5g0398351 43.758 745 369 15 25 750 22 735 5.44e-176 544
Msa1219890 MtrunA17_Chr8g0369891 41.758 728 386 13 30 746 50 750 0.0 557
Msa1219890 MtrunA17_Chr2g0285121 43.169 732 369 15 53 750 66 784 0.0 552
Msa1219890 MtrunA17_Chr4g0076611 43.079 708 373 14 54 747 1 692 0.0 551
Msa1219890 MtrunA17_Chr5g0398241 44.133 750 360 17 25 750 41 755 0.0 544
Msa1219890 MtrunA17_Chr2g0285111 42.877 737 375 15 47 750 64 787 0.0 543
Msa1219890 MtrunA17_Chr5g0398401 44.133 750 360 17 25 750 41 755 0.0 542
Msa1219890 MtrunA17_Chr4g0057531 42.837 712 382 12 50 746 73 774 0.0 538
Msa1219890 MtrunA17_Chr7g0276151 40.736 788 396 19 1 749 1 756 0.0 538
Msa1219890 MtrunA17_Chr4g0057471 42.039 716 391 14 50 752 8 712 1.16e-180 533
Msa1219890 MtrunA17_Chr5g0398311 44.114 739 364 15 28 750 43 748 2.62e-180 533
Msa1219890 MtrunA17_Chr5g0398331 43.414 744 366 17 28 750 43 752 5.08e-180 533
Msa1219890 MtrunA17_Chr4g0026641 40.365 768 414 17 4 746 3 751 2.94e-178 529
Msa1219890 MtrunA17_Chr4g0057481 43.612 681 361 14 82 750 22 691 6.24e-177 523
Msa1219890 MtrunA17_Chr7g0248871 38.931 786 402 22 7 746 8 761 3.94e-176 523
Msa1219890 MtrunA17_Chr8g0345981 39.898 787 406 22 1 749 1 758 6.50e-176 523
Msa1219890 MtrunA17_Chr8g0345971 41.597 714 377 17 46 746 70 756 3.10e-175 521
Msa1219890 MtrunA17_Chr1g0189251 40.251 718 383 17 46 749 69 754 3.12e-174 518
Msa1219890 MtrunA17_Chr8g0345991 39.003 782 416 23 1 749 1 754 7.28e-171 509
Msa1219890 MtrunA17_Chr1g0189561 39.249 772 409 22 11 746 11 758 8.57e-168 502
Msa1219890 MtrunA17_Chr5g0423261 44.497 636 325 13 129 750 2 623 6.28e-167 495
Msa1219890 MtrunA17_Chr3g0136151 39.333 750 409 17 25 749 34 762 1.31e-165 496
Msa1219890 MtrunA17_Chr4g0057491 43.492 630 338 11 130 750 3 623 2.17e-165 491
Msa1219890 MtrunA17_Chr4g0057461 43.128 633 339 14 130 748 3 628 2.77e-163 486
Msa1219890 MtrunA17_Chr8g0354771 40.707 764 407 19 16 747 13 762 8.70e-163 489
Msa1219890 MtrunA17_Chr8g0377961 39.764 762 414 17 14 747 29 773 6.23e-162 487
Msa1219890 MtrunA17_Chr4g0057511 43.860 627 330 13 134 750 3 617 1.41e-160 478
Msa1219890 MtrunA17_Chr7g0250411 40.741 729 391 20 47 748 69 783 5.09e-160 483
Msa1219890 MtrunA17_Chr8g0345961 38.168 786 424 20 1 751 1 759 6.33e-159 479
Msa1219890 MtrunA17_Chr7g0250481 38.814 742 398 20 47 746 68 795 5.98e-158 478
Msa1219890 MtrunA17_Chr3g0143251 38.501 787 407 20 8 749 11 765 1.58e-157 476
Msa1219890 MtrunA17_Chr7g0250391 39.668 784 408 24 10 746 15 780 6.89e-156 472
Msa1219890 MtrunA17_Chr7g0250371 40.548 730 388 22 47 746 69 782 2.64e-155 471
Msa1219890 MtrunA17_Chr2g0303881 41.389 720 364 22 54 749 41 726 3.02e-155 468
Msa1219890 MtrunA17_Chr8g0351011 39.381 711 377 20 50 746 79 749 1.88e-151 459
Msa1219890 MtrunA17_Chr8g0354741 42.946 645 324 15 119 747 16 632 3.56e-150 452
Msa1219890 MtrunA17_Chr7g0246451 38.646 709 385 21 50 746 73 743 1.41e-149 454
Msa1219890 MtrunA17_Chr7g0227991 36.835 771 406 20 8 746 10 731 4.48e-149 453
Msa1219890 MtrunA17_Chr7g0266051 39.492 709 375 21 53 746 34 703 4.59e-149 452
Msa1219890 MtrunA17_Chr6g0470851 37.135 754 411 20 11 746 19 727 1.17e-145 444
Msa1219890 MtrunA17_Chr7g0250331 39.234 757 382 25 47 746 69 804 3.10e-145 445
Msa1219890 MtrunA17_Chr8g0334521 36.387 775 417 20 1 746 4 731 9.91e-145 441
Msa1219890 MtrunA17_Chr6g0470881 37.003 754 412 20 11 746 19 727 7.30e-144 439
Msa1219890 MtrunA17_Chr1g0146251 36.636 767 402 21 11 746 19 732 6.79e-142 434
Msa1219890 MtrunA17_Chr7g0248861 40.970 598 318 14 16 603 50 622 1.41e-140 434
Msa1219890 MtrunA17_Chr7g0248861 51.667 240 107 5 112 348 626 859 1.82e-67 239
Msa1219890 MtrunA17_Chr1g0170081 35.894 755 420 19 11 746 19 728 7.13e-140 429
Msa1219890 MtrunA17_Chr3g0079971 35.807 768 417 22 8 746 9 729 1.38e-139 428
Msa1219890 MtrunA17_Chr1g0146271 35.678 782 415 21 1 746 1 730 1.46e-139 428
Msa1219890 MtrunA17_Chr5g0439271 41.408 611 308 18 167 746 8 599 2.77e-139 423
Msa1219890 MtrunA17_Chr8g0334491 36.765 748 390 25 27 746 33 725 1.26e-132 410
Msa1219890 MtrunA17_Chr8g0376841 39.966 583 287 18 20 569 33 585 1.50e-118 369
Msa1219890 MtrunA17_Chr4g0071871 33.890 779 423 26 28 746 65 811 1.76e-111 357
Msa1219890 MtrunA17_Chr2g0298601 34.545 770 430 27 28 746 65 811 1.25e-105 342
Msa1219890 MtrunA17_Chr5g0447171 37.354 514 259 8 283 747 7 506 3.68e-105 331
Msa1219890 MtrunA17_Chr2g0301011 35.072 556 280 14 83 633 4 483 1.24e-97 311
Msa1219890 MtrunA17_Chr8g0380961 34.045 749 416 27 55 747 118 844 2.34e-94 312
Msa1219890 MtrunA17_Chr2g0302951 33.775 755 421 28 55 752 110 842 4.35e-94 311
Msa1219890 MtrunA17_Chr4g0075331 33.475 705 403 22 45 698 2 691 9.45e-94 308
Msa1219890 MtrunA17_Chr3g0143241 37.552 482 239 16 8 452 11 467 1.14e-83 276
Msa1219890 MtrunA17_Chr7g0261691 43.235 340 170 7 126 452 13 342 4.15e-83 268
Msa1219890 MtrunA17_Chr7g0250461 39.320 412 226 11 47 440 69 474 1.70e-81 268
Msa1219890 MtrunA17_Chr7g0261701 43.493 292 153 7 456 746 7 287 1.94e-70 232
Msa1219890 MtrunA17_Chr4g0026651 41.987 312 147 6 72 352 5 313 2.22e-70 233
Msa1219890 MtrunA17_Chr4g0035881 40.822 365 158 7 208 565 4 317 6.58e-70 232
Msa1219890 MtrunA17_Chr6g0480721 40.256 313 161 6 41 351 1 289 1.17e-67 235
Msa1219890 MtrunA17_Chr6g0480721 41.554 296 147 10 458 746 321 597 1.60e-57 207
Msa1219890 MtrunA17_Chr7g0250441 44.086 279 146 6 473 748 11 282 5.60e-63 213
Msa1219890 MtrunA17_Chr3g0097061 38.750 320 165 7 83 395 4 299 1.12e-60 211
Msa1219890 MtrunA17_Chr3g0097061 46.729 107 49 2 525 631 331 429 2.89e-24 106
Msa1219890 MtrunA17_Chr3g0105451 38.621 290 151 6 468 749 9 279 4.22e-59 201
Msa1219890 MtrunA17_Chr8g0346361 42.199 282 147 8 469 746 225 494 1.58e-57 204
Msa1219890 MtrunA17_Chr8g0346361 47.525 202 85 4 146 346 7 188 7.69e-50 182
Msa1219890 MtrunA17_Chr4g0026661 43.701 254 134 6 494 746 12 257 7.70e-57 195
Msa1219890 MtrunA17_Chr3g0105461 37.322 351 162 7 7 344 14 319 1.28e-55 194
Msa1219890 MtrunA17_Chr3g0103071 35.374 294 162 4 256 532 1 283 4.17e-54 188
Msa1219890 MtrunA17_Chr2g0301911 33.241 361 205 9 143 497 30 360 3.33e-47 172
Msa1219890 MtrunA17_Chr2g0312861 36.015 261 142 9 494 746 1 244 8.69e-45 163
Msa1219890 MtrunA17_Chr2g0301031 37.354 257 144 8 494 746 1 244 4.18e-43 156
Msa1219890 MtrunA17_Chr2g0312841 41.579 190 91 3 146 334 12 182 3.77e-39 143
Msa1219890 MtrunA17_Chr4g0071191 39.269 219 120 6 459 674 42 250 1.68e-38 143
Msa1219890 MtrunA17_Chr5g0436021 45.562 169 77 2 168 334 31 186 2.65e-37 138
Msa1219890 MtrunA17_Chr3g0103061 33.955 268 143 8 4 246 2 260 1.79e-36 138
Msa1219890 MtrunA17_Chr2g0301021 28.935 432 187 14 7 419 13 343 1.17e-34 136
Msa1219890 MtrunA17_Chr2g0301921 36.574 216 121 7 534 746 1 203 1.60e-34 130
Msa1219890 MtrunA17_Chr5g0418921 44.853 136 73 2 463 596 1 136 1.95e-32 124
Msa1219890 MtrunA17_Chr3g0142981 44.737 152 48 3 199 344 50 171 7.61e-27 108
Msa1219890 MtrunA17_Chr8g0376851 35.976 164 97 5 588 747 11 170 5.62e-26 105
Msa1219890 MtrunA17_Chr5g0436031 36.095 169 101 4 580 746 15 178 2.67e-24 102
Msa1219890 MtrunA17_Chr3g0103081 34.247 146 90 3 601 746 1 140 5.70e-21 90.1
Msa1219890 MtrunA17_Chr3g0142971 51.765 85 41 0 477 561 1 85 1.19e-20 87.0
Msa1219890 MtrunA17_Chr3g0143021 39.216 102 61 1 53 154 6 106 5.66e-20 85.9
Msa1219890 MtrunA17_Chr5g0398341 47.423 97 50 1 534 630 1 96 9.20e-20 84.7
Msa1219890 MtrunA17_Chr3g0143231 48.315 89 46 0 477 565 1 89 1.41e-19 84.0
Msa1219890 MtrunA17_Chr4g0035871 40.769 130 74 2 41 167 21 150 1.44e-18 83.2
Msa1219890 MtrunA17_Chr3g0143221 30.435 184 99 5 573 749 2 163 1.11e-17 81.3
Msa1219890 MtrunA17_Chr7g0248851 34.437 151 89 5 601 747 1 145 1.18e-17 80.9
Msa1219890 MtrunA17_Chr3g0077671 52.857 70 32 1 525 593 237 306 9.07e-17 82.0
Msa1219890 MtrunA17_Chr8g0346961 37.190 121 66 5 563 677 1 117 1.06e-16 76.6
Msa1219890 MtrunA17_Chr5g0439281 30.233 172 91 8 26 169 27 197 2.55e-14 72.4
Msa1219890 MtrunA17_Chr8g0354731 36.441 118 60 4 27 129 52 169 4.45e-14 70.9
Msa1219890 MtrunA17_Chr8g0346351 30.818 159 88 4 1 140 1 156 2.66e-13 68.6
Msa1219890 MtrunA17_Chr3g0143011 58.000 50 21 0 295 344 1 50 3.08e-13 65.5
Msa1219890 MtrunA17_Chr3g0142961 30.657 137 89 3 573 704 2 137 6.78e-13 66.6
Msa1219890 MtrunA17_Chr5g0434941 47.297 74 36 1 261 331 1 74 3.63e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219890 AT2G05920.1 65.768 742 232 10 20 750 21 751 0.0 974
Msa1219890 AT5G67360.1 53.553 760 332 12 4 751 7 757 0.0 769
Msa1219890 AT3G14067.1 50.519 770 352 13 3 750 7 769 0.0 730
Msa1219890 AT5G51750.1 48.244 769 364 10 8 750 16 776 0.0 710
Msa1219890 AT4G34980.1 48.758 765 370 12 1 749 1 759 0.0 710
Msa1219890 AT3G14240.1 48.865 749 351 12 28 749 27 770 0.0 690
Msa1219890 AT1G04110.1 45.655 771 378 14 11 749 10 771 0.0 625
Msa1219890 AT1G01900.1 44.593 749 379 14 24 750 39 773 0.0 586
Msa1219890 AT2G04160.1 43.672 719 368 16 47 746 68 768 0.0 570
Msa1219890 AT5G45650.2 42.455 782 378 19 25 749 23 789 0.0 548
Msa1219890 AT5G45650.1 42.455 782 378 19 25 749 23 789 0.0 548
Msa1219890 AT5G59810.1 42.238 715 378 15 47 746 78 772 0.0 539
Msa1219890 AT1G20160.1 39.336 783 404 19 6 749 12 762 1.41e-162 489
Msa1219890 AT4G10520.1 38.860 772 430 19 1 753 1 749 9.91e-162 486
Msa1219890 AT1G20160.2 40.274 730 374 16 51 749 25 723 1.38e-160 483
Msa1219890 AT4G10540.1 40.570 737 379 18 47 753 61 768 1.11e-156 474
Msa1219890 AT4G10550.4 40.959 730 385 17 47 753 9 715 1.78e-156 472
Msa1219890 AT4G10550.2 40.959 730 385 17 47 753 9 715 1.78e-156 472
Msa1219890 AT4G10550.3 40.934 728 388 16 47 753 81 787 3.44e-156 473
Msa1219890 AT4G10550.1 40.934 728 388 16 47 753 65 771 4.55e-156 473
Msa1219890 AT5G67090.1 37.913 757 400 19 11 740 5 718 3.95e-153 464
Msa1219890 AT1G66220.1 37.290 775 421 19 1 747 6 743 4.62e-152 461
Msa1219890 AT5G59090.1 38.844 744 387 21 25 746 29 726 1.30e-151 459
Msa1219890 AT1G20150.1 37.188 761 416 17 29 749 33 771 8.66e-151 459
Msa1219890 AT5G59090.3 38.844 744 385 22 25 746 29 724 1.20e-150 457
Msa1219890 AT1G32960.1 39.422 761 412 20 24 753 28 770 1.74e-150 458
Msa1219890 AT5G59090.2 38.844 744 382 21 25 746 29 721 3.17e-150 456
Msa1219890 AT5G59120.1 38.844 744 387 20 25 746 28 725 1.16e-149 454
Msa1219890 AT1G32940.4 39.702 738 398 18 41 753 1 716 1.38e-149 454
Msa1219890 AT1G32940.2 39.702 738 398 18 41 753 1 716 1.38e-149 454
Msa1219890 AT4G10510.4 40.220 726 395 17 47 753 9 714 1.45e-149 454
Msa1219890 AT4G10510.3 40.220 726 395 17 47 753 65 770 3.44e-149 455
Msa1219890 AT4G10510.2 40.473 719 389 17 54 753 1 699 4.40e-149 452
Msa1219890 AT4G10510.1 40.220 726 395 17 47 753 53 758 4.55e-149 454
Msa1219890 AT4G10530.1 38.070 767 417 19 9 753 10 740 5.39e-149 453
Msa1219890 AT1G32940.1 39.702 738 398 18 41 753 52 767 7.61e-149 454
Msa1219890 AT5G58840.1 37.661 778 392 23 1 752 1 711 8.67e-149 451
Msa1219890 AT4G00230.1 38.750 720 380 18 45 746 65 741 2.20e-148 452
Msa1219890 AT5G59100.1 38.019 747 396 22 25 746 31 735 3.32e-148 451
Msa1219890 AT4G26330.2 38.750 720 407 17 47 746 14 719 1.57e-147 449
Msa1219890 AT3G46840.1 38.139 763 408 20 6 746 12 732 3.43e-147 448
Msa1219890 AT5G59130.4 37.042 764 402 22 9 746 13 723 1.05e-145 444
Msa1219890 AT1G66210.1 36.649 764 428 20 8 747 18 749 3.78e-145 444
Msa1219890 AT5G03620.1 37.643 789 401 22 8 746 9 756 9.03e-145 443
Msa1219890 AT1G32950.1 38.077 780 433 20 5 753 6 766 9.26e-145 443
Msa1219890 AT5G59130.2 37.173 764 391 22 9 746 13 713 3.10e-144 440
Msa1219890 AT5G59130.1 37.173 764 397 23 9 746 13 719 3.11e-144 441
Msa1219890 AT4G21650.1 37.173 764 409 19 24 752 37 764 5.44e-144 441
Msa1219890 AT5G58820.1 38.095 756 386 21 9 746 7 698 5.50e-144 439
Msa1219890 AT1G32950.2 39.373 734 405 18 41 753 1 715 1.80e-143 438
Msa1219890 AT4G26330.1 38.011 734 407 18 47 746 14 733 1.92e-143 439
Msa1219890 AT5G59190.1 39.522 711 366 22 49 746 27 686 8.07e-143 436
Msa1219890 AT3G46850.1 37.451 761 417 20 6 746 11 732 6.11e-142 434
Msa1219890 AT5G58830.1 36.316 760 398 19 6 746 11 703 1.24e-141 433
Msa1219890 AT5G59130.3 37.241 725 391 19 33 746 13 684 3.69e-141 431
Msa1219890 AT4G21630.1 37.581 769 412 21 15 752 26 757 1.55e-140 432
Msa1219890 AT5G11940.1 38.127 758 400 23 22 747 31 751 3.41e-137 423
Msa1219890 AT4G21640.1 36.753 770 389 20 15 752 28 731 3.51e-136 419
Msa1219890 AT5G45640.1 37.668 746 374 19 61 747 37 750 1.06e-135 419
Msa1219890 AT4G21323.1 37.588 713 404 16 47 748 111 793 6.44e-130 405
Msa1219890 AT4G15040.2 36.735 735 401 22 22 746 3 683 1.77e-125 390
Msa1219890 AT4G15040.1 36.735 735 401 22 22 746 3 683 1.77e-125 390
Msa1219890 AT4G21326.1 36.339 732 407 20 41 753 1 692 2.11e-122 382
Msa1219890 AT5G03620.2 39.933 596 291 15 8 565 9 575 1.53e-119 371
Msa1219890 AT1G32970.1 34.675 770 429 22 10 753 6 727 4.99e-117 370
Msa1219890 AT1G32940.3 41.533 561 289 15 41 577 52 597 2.25e-116 364
Msa1219890 AT4G00230.2 40.561 535 273 12 45 565 65 568 8.84e-114 357
Msa1219890 AT5G58840.3 37.607 585 291 14 1 565 1 531 2.10e-111 349
Msa1219890 AT2G19170.1 34.407 776 435 26 24 746 54 808 2.99e-109 352
Msa1219890 AT2G19170.2 34.407 776 435 26 24 746 54 808 2.99e-109 352
Msa1219890 AT4G30020.3 33.848 777 428 26 28 746 61 809 7.55e-106 342
Msa1219890 AT4G30020.1 33.848 777 428 26 28 746 61 809 7.55e-106 342
Msa1219890 AT4G30020.4 33.848 777 428 26 28 746 61 809 7.55e-106 342
Msa1219890 AT4G30020.2 33.848 777 428 26 28 746 61 809 7.55e-106 342
Msa1219890 AT4G20430.3 33.684 760 416 25 55 752 119 852 3.73e-102 333
Msa1219890 AT4G20430.1 33.684 760 416 25 55 752 119 852 3.73e-102 333
Msa1219890 AT4G20430.2 33.644 752 403 25 55 752 119 828 1.42e-98 323
Msa1219890 AT5G44530.1 33.245 758 408 24 55 746 106 831 9.00e-98 322
Msa1219890 AT1G20160.3 39.038 520 264 13 6 495 12 508 8.03e-97 311
Msa1219890 AT2G39850.1 31.969 782 426 32 26 746 27 763 1.14e-96 317
Msa1219890 AT1G30600.1 32.237 760 426 25 55 752 98 830 1.10e-93 310
Msa1219890 AT5G44530.2 32.394 781 409 25 55 746 106 856 7.82e-93 309
Msa1219890 AT1G62340.1 32.157 737 425 20 22 698 62 783 4.29e-87 293
Msa1219890 AT5G58840.2 35.214 514 260 13 1 495 1 460 1.00e-81 269
Msa1219890 AT5G44530.3 32.549 510 277 15 55 512 106 600 1.55e-59 213
Msa1219890 AT1G32980.1 40.741 189 108 3 530 717 3 188 2.31e-38 141
Msa1219890 AT5G59110.1 39.634 164 90 6 590 748 7 166 3.56e-26 106

Find 230 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCGCACCCCAGAGTTTC+TGG 0.144133 8_1:-82828313 Msa1219890:CDS
TCATGAAAACTTTGCGATTC+TGG 0.163852 8_1:+82828204 None:intergenic
TTGTCCACGCCATGGGCTTA+TGG 0.184304 8_1:-82826748 Msa1219890:CDS
CGTAGTTCTGATTCAGTTCT+AGG 0.212113 8_1:-82828369 Msa1219890:CDS
ATTGCACTTGGACTCCATTC+TGG 0.221958 8_1:+82826847 None:intergenic
TCTTGTTCGGCGGGGAATAC+TGG 0.237638 8_1:-82827697 Msa1219890:CDS
GATTCGGTTACGTCTGAATT+TGG 0.251704 8_1:-82826328 Msa1219890:CDS
CAGCAGCGGTGGTGGCAGTA+TGG 0.254435 8_1:+82827983 None:intergenic
ATTCTGAAGCCTGATGTTAT+TGG 0.261578 8_1:-82827124 Msa1219890:CDS
GACCGGCGCTGTTGGGCCTT+CGG 0.291436 8_1:-82827074 Msa1219890:CDS
TGTCCACGCCATGGGCTTAT+GGG 0.322451 8_1:-82826747 Msa1219890:CDS
TACCAGACATGATATTGAAT+TGG 0.324634 8_1:+82827029 None:intergenic
TAGGGCTAGGCTACTGCTAT+TGG 0.325456 8_1:+82826204 None:intergenic
ATTGTCCATGTAAAAGCAAT+TGG 0.328392 8_1:+82826265 None:intergenic
TGGACAATTCTATGAAGATT+TGG 0.329159 8_1:-82826250 Msa1219890:exon
TTCTGAAGCCTGATGTTATT+GGG 0.334006 8_1:-82827123 Msa1219890:CDS
ACCGGCGCTGTTGGGCCTTC+GGG 0.334396 8_1:-82827073 Msa1219890:CDS
TCTCTGTCACGAGGTGAAAT+AGG 0.335194 8_1:+82828018 None:intergenic
CAAAGATATTGTTGATGATT+CGG 0.338233 8_1:-82826344 Msa1219890:CDS
CTCTCCCATTGCATCCCTTA+AGG 0.338316 8_1:+82826774 None:intergenic
CGGTGCTCGAAGCTTCTCTA+AGG 0.347369 8_1:-82828091 Msa1219890:CDS
GTAGCTAACGCCACTCTTCT+TGG 0.348716 8_1:-82827952 Msa1219890:CDS
ACTTGTTCTACCTATTTGTC+TGG 0.376027 8_1:-82826586 Msa1219890:CDS
ATTTGTGGCGTCACACCATT+GGG 0.378777 8_1:+82827145 None:intergenic
GCAACAAACAACACCAAGTT+AGG 0.379170 8_1:-82826291 Msa1219890:CDS
AGCCATACCACGTGCTGTTC+CGG 0.380550 8_1:+82827921 None:intergenic
GGGAAACGAACCGGTTGGTT+TGG 0.384425 8_1:-82827530 Msa1219890:CDS
ACTTCATACGACGTAGTTAT+CGG 0.386652 8_1:-82828249 Msa1219890:CDS
TGGTGAAAGGCAAACATATA+TGG 0.391086 8_1:-82826383 Msa1219890:CDS
GAAAGAAAGCAGCAGCTGTT+TGG 0.395226 8_1:-82826152 Msa1219890:three_prime_UTR
AGGGATATTGGTTTCTTGTT+CGG 0.398568 8_1:-82827710 Msa1219890:CDS
GGCGGTGGAGAGAGGGATAT+TGG 0.399219 8_1:-82827722 Msa1219890:CDS
TTACATGGTACCGGCCGTTT+CGG 0.400307 8_1:-82827302 Msa1219890:CDS
GAGAATCGGAAGAAGAAGAT+TGG 0.405934 8_1:+82828463 None:intergenic
GTGTACTTGACACTGGAGTA+TGG 0.406869 8_1:-82828227 Msa1219890:CDS
AGCGGACACTTACTAACGTT+GGG 0.409089 8_1:-82826495 Msa1219890:CDS
CCAACGGCTGTGCTTAGTTT+CGG 0.409141 8_1:-82827226 Msa1219890:CDS
GCGGGATGGACCGGCGCTGT+TGG 0.410208 8_1:-82827082 Msa1219890:CDS
TAGGTAGAACAAGTAACATT+AGG 0.416299 8_1:+82826595 None:intergenic
CAACACAGAGTCTCCCTTAA+GGG 0.417194 8_1:-82826788 Msa1219890:CDS
TTGGAGAATGGGAGAGTACA+TGG 0.420480 8_1:+82828482 None:intergenic
CATACTGCCACCACCGCTGC+TGG 0.421386 8_1:-82827982 Msa1219890:CDS
TCTCCCATTGCATCCCTTAA+GGG 0.426619 8_1:+82826775 None:intergenic
CGCCATCGAGATGGGATTTG+AGG 0.427411 8_1:+82828171 None:intergenic
GACCGTCGGAGCAGGGACTT+TGG 0.431677 8_1:-82827632 Msa1219890:CDS
AATTTGTGGCGTCACACCAT+TGG 0.431759 8_1:+82827144 None:intergenic
GGCGGAGCCAGCAGCGGTGG+TGG 0.433974 8_1:+82827975 None:intergenic
ATCACCAGGGCCAGACAAAT+AGG 0.437197 8_1:+82826576 None:intergenic
GAAGAAGAAGATTGGAGAAT+GGG 0.439614 8_1:+82828471 None:intergenic
AGGGCTAGGCTACTGCTATT+GGG 0.439811 8_1:+82826205 None:intergenic
ACCCGCACCCCAGAGTTTCT+GGG 0.441048 8_1:-82828312 Msa1219890:CDS
ACGCCATGGGCTTATGGGTC+AGG 0.441455 8_1:-82826742 Msa1219890:CDS
TGAAGCAGACCCAGAAACTC+TGG 0.442077 8_1:+82828303 None:intergenic
TCTACCTATTTGTCTGGCCC+TGG 0.446108 8_1:-82826580 Msa1219890:CDS
TTAAAATAAACCAAACCAAC+CGG 0.448597 8_1:+82827520 None:intergenic
CATGGTACCGGCCGTTTCGG+TGG 0.448613 8_1:-82827299 Msa1219890:CDS
CAGAGTGAAGAATCGAAATC+TGG 0.448619 8_1:+82828129 None:intergenic
AAGCAATTGGGCTCCTAACT+TGG 0.449411 8_1:+82826278 None:intergenic
TAACTACGTCGTATGAAGTT+TGG 0.450412 8_1:+82828253 None:intergenic
GATTGCCGAGTCAAGTGAAC+CGG 0.453450 8_1:+82827462 None:intergenic
GGGTATCTCATGGCATCTCC+TGG 0.456433 8_1:-82828069 Msa1219890:CDS
TATTTCGACACCATCGCAAT+CGG 0.458637 8_1:-82827754 Msa1219890:CDS
ACAACACAGAGTCTCCCTTA+AGG 0.459169 8_1:-82826789 Msa1219890:CDS
GTGATTGACGCTGGAGGTGT+TGG 0.460349 8_1:-82827376 Msa1219890:CDS
GCCCAATTCAATATCATGTC+TGG 0.463791 8_1:-82827031 Msa1219890:intron
GGAAGAAGAAGATTGGAGAA+TGG 0.465300 8_1:+82828470 None:intergenic
TGGATCATGACCGTCGGAGC+AGG 0.465301 8_1:-82827640 Msa1219890:CDS
ACCAGACATGATATTGAATT+GGG 0.467093 8_1:+82827030 None:intergenic
ACATCAGGCTTCAGAATTTG+TGG 0.467262 8_1:+82827130 None:intergenic
ACTCTTCTTGGTTACGCTAC+CGG 0.467899 8_1:-82827940 Msa1219890:CDS
GTTTATGATGTAGTTGTTAG+TGG 0.469150 8_1:-82826460 Msa1219890:CDS
AAGCCTGATGTTATTGGGCC+TGG 0.469767 8_1:-82827118 Msa1219890:CDS
ACTTTACAGTGGAGAAGGAA+TGG 0.472274 8_1:-82827551 Msa1219890:CDS
TTTGGTGAAGAAACTGAGAA+TGG 0.475112 8_1:+82828271 None:intergenic
AGAGGCCTTGTCCACGCCAT+GGG 0.478438 8_1:-82826755 Msa1219890:CDS
ACCCAGAAACTCTGGGGTGC+GGG 0.478882 8_1:+82828311 None:intergenic
ATAAACAAGGCCAGGAGATA+AGG 0.479504 8_1:+82826699 None:intergenic
GTAGGTGTAAAGTAGAGAAT+CGG 0.480763 8_1:+82828449 None:intergenic
AGCAGCGGTGGTGGCAGTAT+GGG 0.480916 8_1:+82827984 None:intergenic
AGAGCTGATTTGATTGCACT+TGG 0.485556 8_1:+82826835 None:intergenic
CGGAGCAGGGACTTTGGATC+GGG 0.487286 8_1:-82827626 Msa1219890:CDS
CTTTACAGTGGAGAAGGAAT+GGG 0.487413 8_1:-82827550 Msa1219890:CDS
TTGGTGAAGAAACTGAGAAT+GGG 0.489412 8_1:+82828272 None:intergenic
GGCACGTATCGCTGTTTACA+AGG 0.489529 8_1:-82827893 Msa1219890:CDS
AACACGGCGGCGAGCGGTGA+AGG 0.493506 8_1:-82827340 Msa1219890:CDS
AACATCTTAGCGGGATGGAC+CGG 0.494597 8_1:-82827091 Msa1219890:CDS
GACCCAGAAACTCTGGGGTG+CGG 0.496444 8_1:+82828310 None:intergenic
GTCTCCCTTAAGGGATGCAA+TGG 0.498480 8_1:-82826779 Msa1219890:CDS
CACTTTCCACGCCATCGAGA+TGG 0.500509 8_1:+82828162 None:intergenic
AAATCAACTACAATAGGGCT+AGG 0.504370 8_1:+82826191 None:intergenic
ATGGCATCTCCTGGTGGTGG+TGG 0.505205 8_1:-82828060 Msa1219890:CDS
GAGAGGCCTTGTCCACGCCA+TGG 0.507862 8_1:-82826756 Msa1219890:CDS
GCAGCAGCTGTTTGGAGCTG+TGG 0.509203 8_1:-82826144 Msa1219890:three_prime_UTR
TTGTCCATGTAAAAGCAATT+GGG 0.510251 8_1:+82826266 None:intergenic
TGCATTCTGATGTTATTGCT+TGG 0.511280 8_1:-82828649 Msa1219890:five_prime_UTR
CCTCAAAAGGCCTTATCTCC+TGG 0.511355 8_1:-82826709 Msa1219890:CDS
TACGGCGGAGCCAGCAGCGG+TGG 0.512373 8_1:+82827972 None:intergenic
AGGTCATGTCAACCCTCAAA+AGG 0.512794 8_1:-82826722 Msa1219890:CDS
TACCGGAACAGCACGTGGTA+TGG 0.512993 8_1:-82827923 Msa1219890:CDS
ATGTCATGTCCGCACATAAG+TGG 0.515272 8_1:-82826898 Msa1219890:CDS
TTCAGCTCTCGTGGCCCCAA+TGG 0.516803 8_1:-82827160 Msa1219890:CDS
ATGTTATGTCATAGACTGCT+AGG 0.518347 8_1:+82826029 None:intergenic
CCCGCTAAGATGTTCACGCC+AGG 0.518631 8_1:+82827100 None:intergenic
AAGCATACTCTAATCGTACT+TGG 0.518971 8_1:+82825995 None:intergenic
TGATTGACGCTGGAGGTGTT+GGG 0.520092 8_1:-82827375 Msa1219890:CDS
AAGATACAAAGTTGAGGTTG+AGG 0.522887 8_1:+82828593 None:intergenic
GCCCGAAGGCCCAACAGCGC+CGG 0.523502 8_1:+82827072 None:intergenic
ACCTACACTCACTCTTACAA+CGG 0.523770 8_1:-82828432 Msa1219890:CDS
TCGCTGTTTACAAGGTCTGC+TGG 0.524156 8_1:-82827885 Msa1219890:CDS
AGAAGGAATGGGAAACGAAC+CGG 0.526234 8_1:-82827539 Msa1219890:CDS
TTTATGATGTAGTTGTTAGT+GGG 0.526742 8_1:-82826459 Msa1219890:CDS
GCGATGGTGTCGAAATAGTA+AGG 0.529219 8_1:+82827760 None:intergenic
GTAAACTCACGTGTGGAGAA+AGG 0.531274 8_1:-82827406 Msa1219890:CDS
ACTTTCCACGCCATCGAGAT+GGG 0.533299 8_1:+82828163 None:intergenic
ATAAGCCCATGGCGTGGACA+AGG 0.534719 8_1:+82826750 None:intergenic
TCAGCATCATAAACAAGGCC+AGG 0.537214 8_1:+82826691 None:intergenic
ATTATTATCTGCTACAGTAA+TGG 0.537590 8_1:-82828559 Msa1219890:CDS
CTCATGGCATCTCCTGGTGG+TGG 0.537670 8_1:-82828063 Msa1219890:CDS
AGCACGTGGTATGGCTCCAC+AGG 0.539879 8_1:-82827914 Msa1219890:CDS
ACGCCAGGCCCAATAACATC+AGG 0.542572 8_1:+82827115 None:intergenic
GGCTGATAGTTACATGGTAC+CGG 0.542763 8_1:-82827311 Msa1219890:CDS
ACAGTTATCCCCACCGTGGA+TGG 0.543147 8_1:+82826436 None:intergenic
ATATTGGTTTCTTGTTCGGC+GGG 0.545016 8_1:-82827706 Msa1219890:CDS
GTTTCACTTTACAGTGGAGA+AGG 0.545197 8_1:-82827556 Msa1219890:CDS
GTTAGTGGGCCATCCACGGT+GGG 0.545428 8_1:-82826445 Msa1219890:CDS
TTTCCGGCTTACGCTACTCT+CGG 0.546885 8_1:-82827601 Msa1219890:CDS
AACTGTGAATCCTACCAAGC+TGG 0.547180 8_1:-82826419 Msa1219890:CDS
AGCTACGGCGGAGCCAGCAG+CGG 0.550452 8_1:+82827969 None:intergenic
ATGGTACCGGCCGTTTCGGT+GGG 0.550677 8_1:-82827298 Msa1219890:CDS
ATCTATTCCTGCGAGTATGT+CGG 0.550739 8_1:+82827843 None:intergenic
GGCGGCGAGCGGTGAAGGAG+TGG 0.552082 8_1:-82827335 Msa1219890:CDS
GAAGCAGACCCAGAAACTCT+GGG 0.553230 8_1:+82828304 None:intergenic
CCTGGCGTGAACATCTTAGC+GGG 0.554247 8_1:-82827100 Msa1219890:CDS
TCGGAGCAGGGACTTTGGAT+CGG 0.560028 8_1:-82827627 Msa1219890:CDS
TGAAAGCGGCTCATCCAGAA+TGG 0.560236 8_1:-82826861 Msa1219890:CDS
TCGAGTAGTATATGTATGCC+CGG 0.561085 8_1:-82827481 Msa1219890:CDS
TGGGATGATTCTTGCAAACA+CGG 0.561178 8_1:-82827356 Msa1219890:CDS
TACAAGGTCTGCTGGACCGA+CGG 0.562470 8_1:-82827877 Msa1219890:CDS
AAGAAGAGTGGCGTTAGCTA+CGG 0.562897 8_1:+82827954 None:intergenic
TTCGCCTCCGACATACTCGC+AGG 0.566678 8_1:-82827850 Msa1219890:CDS
TTTCCGAGAGTAGCGTAAGC+CGG 0.567121 8_1:+82827598 None:intergenic
TATCTCATGGCATCTCCTGG+TGG 0.568109 8_1:-82828066 Msa1219890:CDS
CTGAATTTGGCAGTATTACG+TGG 0.571708 8_1:-82826315 Msa1219890:CDS
GGTGCTCGAAGCTTCTCTAA+GGG 0.571839 8_1:-82828090 Msa1219890:CDS
GATATTGGTTTCTTGTTCGG+CGG 0.572540 8_1:-82827707 Msa1219890:CDS
AGTTGAGGTTGAGGATGCCA+TGG 0.574036 8_1:+82828602 None:intergenic
AAAGATGCTACCACGGGTGA+AGG 0.575323 8_1:+82827181 None:intergenic
CAGCAGCTGTTTGGAGCTGT+GGG 0.575642 8_1:-82826143 Msa1219890:three_prime_UTR
CGTGGCCGCGTTGTTGAAAG+CGG 0.578930 8_1:-82826875 Msa1219890:CDS
TTCTTTCTACCACCACCACC+AGG 0.579198 8_1:+82828051 None:intergenic
GCCTGGCGTGAACATCTTAG+CGG 0.579895 8_1:-82827101 Msa1219890:CDS
GATGGGTAATTAAGATCACC+AGG 0.581944 8_1:+82826562 None:intergenic
CTTCTCTAAGGGGTATCTCA+TGG 0.582430 8_1:-82828079 Msa1219890:CDS
ACGGCTGTGCTTAGTTTCGG+TGG 0.584449 8_1:-82827223 Msa1219890:CDS
CAAATCCCATCTCGATGGCG+TGG 0.585048 8_1:-82828168 Msa1219890:CDS
GGCACGGTTGTGATTGACGC+TGG 0.585266 8_1:-82827385 Msa1219890:CDS
CGCAAAAGCTCCGATTGCGA+TGG 0.585467 8_1:+82827744 None:intergenic
ATCCAAAGTCCCTGCTCCGA+CGG 0.586633 8_1:+82827630 None:intergenic
TCTCCCTTAAGGGATGCAAT+GGG 0.587215 8_1:-82826778 Msa1219890:CDS
TTGCACTTGTTGAGTGTCAA+GGG 0.587760 8_1:+82828398 None:intergenic
GGATCATGACCGTCGGAGCA+GGG 0.589828 8_1:-82827639 Msa1219890:CDS
CAGTGTCAGCATCATAAACA+AGG 0.590216 8_1:+82826686 None:intergenic
CTTGACTCGGCAATCGTGCG+CGG 0.590936 8_1:-82827454 Msa1219890:CDS
AAAGTGGTTGTATGTGATAG+AGG 0.591716 8_1:-82827430 Msa1219890:CDS
CTTGCACTTGTTGAGTGTCA+AGG 0.593239 8_1:+82828397 None:intergenic
GATGTGTTGTCACTCTCACT+CGG 0.593420 8_1:-82827799 Msa1219890:CDS
ATTTCACCTCGTGACAGAGA+TGG 0.593977 8_1:-82828015 Msa1219890:CDS
AGTTGTTAGTGGGCCATCCA+CGG 0.595088 8_1:-82826449 Msa1219890:CDS
GCTTACGCTACTCTCGGAAA+CGG 0.597426 8_1:-82827595 Msa1219890:CDS
GGAAACGGAAAACGTTTCGC+CGG 0.599631 8_1:-82827580 Msa1219890:CDS
GTGGGATGTTGATGTTGCAA+AGG 0.599665 8_1:-82826125 Msa1219890:three_prime_UTR
CTTAAGGGATGCAATGGGAG+AGG 0.600444 8_1:-82826773 Msa1219890:CDS
AGCGTTGGATTCTAATCCAA+CGG 0.600590 8_1:-82827242 Msa1219890:CDS
GGCGAGCGGTGAAGGAGTGG+TGG 0.600946 8_1:-82827332 Msa1219890:CDS
ATTGCCGAGTCAAGTGAACC+GGG 0.601407 8_1:+82827463 None:intergenic
CTTGCAAACACGGCGGCGAG+CGG 0.601628 8_1:-82827346 Msa1219890:CDS
CTTCGGGCTCACAAGACACT+CGG 0.603642 8_1:-82827057 Msa1219890:CDS
GCGTGAACATCTTAGCGGGA+TGG 0.607911 8_1:-82827096 Msa1219890:CDS
AAGCGGACACTTACTAACGT+TGG 0.609439 8_1:-82826496 Msa1219890:CDS
TACAAGAAGATACAAAGTTG+AGG 0.609951 8_1:+82828587 None:intergenic
ATGTCCGCACATAAGTGGCG+TGG 0.612254 8_1:-82826893 Msa1219890:CDS
GCTCCGACGGTCATGATCCA+CGG 0.612687 8_1:+82827643 None:intergenic
TGGGATGTTGATGTTGCAAA+GGG 0.615816 8_1:-82826124 Msa1219890:three_prime_UTR
AAAACAAATTAAGAAAGCCA+TGG 0.616838 8_1:-82828619 Msa1219890:exon
GTTATCGGTGTACTTGACAC+TGG 0.621282 8_1:-82828234 Msa1219890:CDS
TATGCCCGGTTCACTTGACT+CGG 0.625542 8_1:-82827467 Msa1219890:CDS
TGCCTCAAATCCCATCTCGA+TGG 0.627913 8_1:-82828173 Msa1219890:CDS
GTAGCATCTTTCAGCTCTCG+TGG 0.630684 8_1:-82827169 Msa1219890:CDS
TGTTAGTGGGCCATCCACGG+TGG 0.633368 8_1:-82826446 Msa1219890:CDS
CCGAAACTAAGCACAGCCGT+TGG 0.639798 8_1:+82827226 None:intergenic
GTGGTGTTGTTCAATACAAG+CGG 0.645961 8_1:-82826513 Msa1219890:CDS
TAAACAGCGATACGTGCCTG+TGG 0.645964 8_1:+82827898 None:intergenic
TGACCTGACCCATAAGCCCA+TGG 0.650261 8_1:+82826739 None:intergenic
TTAGTGGGCCATCCACGGTG+GGG 0.650964 8_1:-82826444 Msa1219890:CDS
TCCACTGTAAAGTGAAACGC+CGG 0.651251 8_1:+82827561 None:intergenic
AAATGTAAATGCAATTCGTG+AGG 0.653711 8_1:+82828751 None:intergenic
AGTGGTGGCTGATAGTTACA+TGG 0.656319 8_1:-82827317 Msa1219890:CDS
GTGCTCGAAGCTTCTCTAAG+GGG 0.657498 8_1:-82828089 Msa1219890:CDS
CCGTGTCCATCTCTGTCACG+AGG 0.657961 8_1:+82828009 None:intergenic
GGTGTCGAAATAGTAAGGAG+TGG 0.658621 8_1:+82827765 None:intergenic
GAGCTGAAAGATGCTACCAC+GGG 0.660749 8_1:+82827175 None:intergenic
TATTGGTTTCTTGTTCGGCG+GGG 0.662234 8_1:-82827705 Msa1219890:CDS
AGAGCTGAAAGATGCTACCA+CGG 0.662264 8_1:+82827174 None:intergenic
GCCGGCGTTTCACTTTACAG+TGG 0.663644 8_1:-82827562 Msa1219890:CDS
TTCGATAACGAACCGCTGCG+AGG 0.664252 8_1:+82827673 None:intergenic
GCGGCCACGCCACTTATGTG+CGG 0.665110 8_1:+82826889 None:intergenic
CGTTATCGAATGTAGCTCCG+TGG 0.668641 8_1:-82827660 Msa1219890:CDS
TGACCCATAAGCCCATGGCG+TGG 0.671307 8_1:+82826744 None:intergenic
TAGAGGTGTAAACTCACGTG+TGG 0.673521 8_1:-82827413 Msa1219890:CDS
GGAATGGGAAACGAACCGGT+TGG 0.676396 8_1:-82827535 Msa1219890:CDS
GGGAATACTGGACCTCGCAG+CGG 0.677204 8_1:-82827685 Msa1219890:CDS
GCTCCGTGGATCATGACCGT+CGG 0.679466 8_1:-82827646 Msa1219890:CDS
GCTTGACAATGAGTTTCACA+TGG 0.684717 8_1:+82826620 None:intergenic
ATAGATCAAGCGATTCAAGA+CGG 0.687911 8_1:-82827826 Msa1219890:CDS
GGTAGCGTAACCAAGAAGAG+TGG 0.691209 8_1:+82827942 None:intergenic
TACGCTACCGGAACAGCACG+TGG 0.695241 8_1:-82827928 Msa1219890:CDS
GAACGTGAGACCTTCACCCG+TGG 0.697979 8_1:-82827191 Msa1219890:CDS
CTCACGTGTGGAGAAAGGCA+CGG 0.701275 8_1:-82827401 Msa1219890:CDS
ACGGTTGTGATTGACGCTGG+AGG 0.706420 8_1:-82827382 Msa1219890:CDS
CCTCGTGACAGAGATGGACA+CGG 0.713970 8_1:-82828009 Msa1219890:CDS
TATTCCTGCGAGTATGTCGG+AGG 0.715803 8_1:+82827846 None:intergenic
ACCGTTGTAAGAGTGAGTGT+AGG 0.715846 8_1:+82828431 None:intergenic
TTTGTGGCGTCACACCATTG+GGG 0.719539 8_1:+82827146 None:intergenic
GTCGGAGGCGAAACAACCGT+CGG 0.727526 8_1:+82827861 None:intergenic
GTGTTGTCACTCTCACTCGG+TGG 0.734561 8_1:-82827796 Msa1219890:CDS
AAGCAGACCCAGAAACTCTG+GGG 0.735187 8_1:+82828305 None:intergenic
ATGGGTAATTAAGATCACCA+GGG 0.759190 8_1:+82826563 None:intergenic
GATGATTCTTGCAAACACGG+CGG 0.761680 8_1:-82827353 Msa1219890:CDS
ATTCACAGTTATCCCCACCG+TGG 0.775304 8_1:+82826432 None:intergenic
ATGAGCCGCTTTCAACAACG+CGG 0.781377 8_1:+82826870 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGCAATTGATTAATATT+CGG + chr8_1:82827823-82827842 None:intergenic 15.0%
!!! TTTTTAAATCAACTACAATA+GGG + chr8_1:82828591-82828610 None:intergenic 15.0%
!!! TTTTTTAAATCAACTACAAT+AGG + chr8_1:82828592-82828611 None:intergenic 15.0%
!!! AACTATGTAAGTTTTTTTGT+TGG + chr8_1:82826247-82826266 None:intergenic 20.0%
! AAAACAAATTAAGAAAGCCA+TGG - chr8_1:82826155-82826174 Msa1219890:three_prime_UTR 25.0%
! ATTATTATCTGCTACAGTAA+TGG - chr8_1:82826215-82826234 Msa1219890:three_prime_UTR 25.0%
! TTAAAATAAACCAAACCAAC+CGG + chr8_1:82827257-82827276 None:intergenic 25.0%
!!! GTTTGGTTTATTTTAACGAA+CGG - chr8_1:82827261-82827280 Msa1219890:CDS 25.0%
! TAATATTCGGTCTTACATAT+AGG + chr8_1:82827810-82827829 None:intergenic 25.0%
! CAAAAACAACAGAAAATGAT+GGG + chr8_1:82828232-82828251 None:intergenic 25.0%
! TTTATGATGTAGTTGTTAGT+GGG - chr8_1:82828315-82828334 Msa1219890:CDS 25.0%
!!! CAAAGATATTGTTGATGATT+CGG - chr8_1:82828430-82828449 Msa1219890:CDS 25.0%
AAATGTAAATGCAATTCGTG+AGG + chr8_1:82826026-82826045 None:intergenic 30.0%
TACAAGAAGATACAAAGTTG+AGG + chr8_1:82826190-82826209 None:intergenic 30.0%
CTCTGTAACAAAAAACTCAT+CGG - chr8_1:82826663-82826682 Msa1219890:CDS 30.0%
ACCAGACATGATATTGAATT+GGG + chr8_1:82827747-82827766 None:intergenic 30.0%
TACCAGACATGATATTGAAT+TGG + chr8_1:82827748-82827767 None:intergenic 30.0%
TAGGTAGAACAAGTAACATT+AGG + chr8_1:82828182-82828201 None:intergenic 30.0%
CCAAAAACAACAGAAAATGA+TGG + chr8_1:82828233-82828252 None:intergenic 30.0%
!!! CCATCATTTTCTGTTGTTTT+TGG - chr8_1:82828230-82828249 Msa1219890:CDS 30.0%
!!! GTTGTTTTTGGAAACAATAG+TGG - chr8_1:82828242-82828261 Msa1219890:CDS 30.0%
GTTTATGATGTAGTTGTTAG+TGG - chr8_1:82828314-82828333 Msa1219890:CDS 30.0%
TTGTCCATGTAAAAGCAATT+GGG + chr8_1:82828511-82828530 None:intergenic 30.0%
ATTGTCCATGTAAAAGCAAT+TGG + chr8_1:82828512-82828531 None:intergenic 30.0%
TGGACAATTCTATGAAGATT+TGG - chr8_1:82828524-82828543 Msa1219890:CDS 30.0%
TGCATTCTGATGTTATTGCT+TGG - chr8_1:82826125-82826144 Msa1219890:three_prime_UTR 35.0%
AAGATACAAAGTTGAGGTTG+AGG + chr8_1:82826184-82826203 None:intergenic 35.0%
GAAGAAGAAGATTGGAGAAT+GGG + chr8_1:82826306-82826325 None:intergenic 35.0%
GTAGGTGTAAAGTAGAGAAT+CGG + chr8_1:82826328-82826347 None:intergenic 35.0%
TTGGTGAAGAAACTGAGAAT+GGG + chr8_1:82826505-82826524 None:intergenic 35.0%
TTTGGTGAAGAAACTGAGAA+TGG + chr8_1:82826506-82826525 None:intergenic 35.0%
TAACTACGTCGTATGAAGTT+TGG + chr8_1:82826524-82826543 None:intergenic 35.0%
ACTTCATACGACGTAGTTAT+CGG - chr8_1:82826525-82826544 Msa1219890:CDS 35.0%
TCATGAAAACTTTGCGATTC+TGG + chr8_1:82826573-82826592 None:intergenic 35.0%
ATAGATCAAGCGATTCAAGA+CGG - chr8_1:82826948-82826967 Msa1219890:intron 35.0%
!! AGGGATATTGGTTTCTTGTT+CGG - chr8_1:82827064-82827083 Msa1219890:CDS 35.0%
AAAGTGGTTGTATGTGATAG+AGG - chr8_1:82827344-82827363 Msa1219890:CDS 35.0%
! GATTAAAAAGTATGCAGCGT+TGG - chr8_1:82827517-82827536 Msa1219890:CDS 35.0%
!! ATTCTGAAGCCTGATGTTAT+TGG - chr8_1:82827650-82827669 Msa1219890:CDS 35.0%
!! TTCTGAAGCCTGATGTTATT+GGG - chr8_1:82827651-82827670 Msa1219890:CDS 35.0%
ACTTGTTCTACCTATTTGTC+TGG - chr8_1:82828188-82828207 Msa1219890:CDS 35.0%
ATGGGTAATTAAGATCACCA+GGG + chr8_1:82828214-82828233 None:intergenic 35.0%
!!! TTTTTGAGCAAGTTGGTGAA+AGG - chr8_1:82828378-82828397 Msa1219890:CDS 35.0%
TGGTGAAAGGCAAACATATA+TGG - chr8_1:82828391-82828410 Msa1219890:CDS 35.0%
AAATCAACTACAATAGGGCT+AGG + chr8_1:82828586-82828605 None:intergenic 35.0%
ATGTTATGTCATAGACTGCT+AGG + chr8_1:82828748-82828767 None:intergenic 35.0%
AAGCATACTCTAATCGTACT+TGG + chr8_1:82828782-82828801 None:intergenic 35.0%
GGAAGAAGAAGATTGGAGAA+TGG + chr8_1:82826307-82826326 None:intergenic 40.0%
GAGAATCGGAAGAAGAAGAT+TGG + chr8_1:82826314-82826333 None:intergenic 40.0%
ACCTACACTCACTCTTACAA+CGG - chr8_1:82826342-82826361 Msa1219890:CDS 40.0%
! TTGCACTTGTTGAGTGTCAA+GGG + chr8_1:82826379-82826398 None:intergenic 40.0%
!! CGTAGTTCTGATTCAGTTCT+AGG - chr8_1:82826405-82826424 Msa1219890:CDS 40.0%
CAGAGTGAAGAATCGAAATC+TGG + chr8_1:82826648-82826667 None:intergenic 40.0%
ATCTATTCCTGCGAGTATGT+CGG + chr8_1:82826934-82826953 None:intergenic 40.0%
TATTTCGACACCATCGCAAT+CGG - chr8_1:82827020-82827039 Msa1219890:intron 40.0%
!! GATATTGGTTTCTTGTTCGG+CGG - chr8_1:82827067-82827086 Msa1219890:CDS 40.0%
!! ATATTGGTTTCTTGTTCGGC+GGG - chr8_1:82827068-82827087 Msa1219890:CDS 40.0%
GTTTCACTTTACAGTGGAGA+AGG - chr8_1:82827218-82827237 Msa1219890:CDS 40.0%
ACTTTACAGTGGAGAAGGAA+TGG - chr8_1:82827223-82827242 Msa1219890:CDS 40.0%
CTTTACAGTGGAGAAGGAAT+GGG - chr8_1:82827224-82827243 Msa1219890:CDS 40.0%
TCGAGTAGTATATGTATGCC+CGG - chr8_1:82827293-82827312 Msa1219890:CDS 40.0%
TGGGATGATTCTTGCAAACA+CGG - chr8_1:82827418-82827437 Msa1219890:CDS 40.0%
! AGCGTTGGATTCTAATCCAA+CGG - chr8_1:82827532-82827551 Msa1219890:CDS 40.0%
ACATCAGGCTTCAGAATTTG+TGG + chr8_1:82827647-82827666 None:intergenic 40.0%
GCCCAATTCAATATCATGTC+TGG - chr8_1:82827743-82827762 Msa1219890:CDS 40.0%
!! GTTACTGCGTTGATAACGTT+AGG - chr8_1:82827846-82827865 Msa1219890:CDS 40.0%
!! AGAGCTGATTTGATTGCACT+TGG + chr8_1:82827942-82827961 None:intergenic 40.0%
ATAAACAAGGCCAGGAGATA+AGG + chr8_1:82828078-82828097 None:intergenic 40.0%
CAGTGTCAGCATCATAAACA+AGG + chr8_1:82828091-82828110 None:intergenic 40.0%
GCTTGACAATGAGTTTCACA+TGG + chr8_1:82828157-82828176 None:intergenic 40.0%
GATGGGTAATTAAGATCACC+AGG + chr8_1:82828215-82828234 None:intergenic 40.0%
!! GTGGTGTTGTTCAATACAAG+CGG - chr8_1:82828261-82828280 Msa1219890:CDS 40.0%
! AACTTGCTCAAAAACCAGCT+TGG + chr8_1:82828372-82828391 None:intergenic 40.0%
!!! AAGCTGGTTTTTGAGCAAGT+TGG - chr8_1:82828371-82828390 Msa1219890:CDS 40.0%
! GATTCGGTTACGTCTGAATT+TGG - chr8_1:82828446-82828465 Msa1219890:CDS 40.0%
CTGAATTTGGCAGTATTACG+TGG - chr8_1:82828459-82828478 Msa1219890:CDS 40.0%
GCAACAAACAACACCAAGTT+AGG - chr8_1:82828483-82828502 Msa1219890:CDS 40.0%
TGGGATGTTGATGTTGCAAA+GGG - chr8_1:82828650-82828669 Msa1219890:five_prime_UTR 40.0%
! TTGGAGAATGGGAGAGTACA+TGG + chr8_1:82826295-82826314 None:intergenic 45.0%
ACCGTTGTAAGAGTGAGTGT+AGG + chr8_1:82826346-82826365 None:intergenic 45.0%
! CTTGCACTTGTTGAGTGTCA+AGG + chr8_1:82826380-82826399 None:intergenic 45.0%
GTTATCGGTGTACTTGACAC+TGG - chr8_1:82826540-82826559 Msa1219890:CDS 45.0%
GTGTACTTGACACTGGAGTA+TGG - chr8_1:82826547-82826566 Msa1219890:CDS 45.0%
!! CTTCTCTAAGGGGTATCTCA+TGG - chr8_1:82826695-82826714 Msa1219890:CDS 45.0%
TCTCTGTCACGAGGTGAAAT+AGG + chr8_1:82826759-82826778 None:intergenic 45.0%
ATTTCACCTCGTGACAGAGA+TGG - chr8_1:82826759-82826778 Msa1219890:CDS 45.0%
AAGAAGAGTGGCGTTAGCTA+CGG + chr8_1:82826823-82826842 None:intergenic 45.0%
ACTCTTCTTGGTTACGCTAC+CGG - chr8_1:82826834-82826853 Msa1219890:CDS 45.0%
GATGTGTTGTCACTCTCACT+CGG - chr8_1:82826975-82826994 Msa1219890:intron 45.0%
! GGTGTCGAAATAGTAAGGAG+TGG + chr8_1:82827012-82827031 None:intergenic 45.0%
! GCGATGGTGTCGAAATAGTA+AGG + chr8_1:82827017-82827036 None:intergenic 45.0%
!! TATTGGTTTCTTGTTCGGCG+GGG - chr8_1:82827069-82827088 Msa1219890:CDS 45.0%
! GACTTTGGATCGGGATTTTC+CGG - chr8_1:82827157-82827176 Msa1219890:CDS 45.0%
TCCACTGTAAAGTGAAACGC+CGG + chr8_1:82827216-82827235 None:intergenic 45.0%
AGAAGGAATGGGAAACGAAC+CGG - chr8_1:82827235-82827254 Msa1219890:CDS 45.0%
! TAGAGGTGTAAACTCACGTG+TGG - chr8_1:82827361-82827380 Msa1219890:CDS 45.0%
GTAAACTCACGTGTGGAGAA+AGG - chr8_1:82827368-82827387 Msa1219890:CDS 45.0%
GATGATTCTTGCAAACACGG+CGG - chr8_1:82827421-82827440 Msa1219890:CDS 45.0%
AGTGGTGGCTGATAGTTACA+TGG - chr8_1:82827457-82827476 Msa1219890:CDS 45.0%
GGCTGATAGTTACATGGTAC+CGG - chr8_1:82827463-82827482 Msa1219890:CDS 45.0%
!!! CTCGTTTTTTCCCACCGAAA+CGG + chr8_1:82827489-82827508 None:intergenic 45.0%
GTTTCGGTGGGAAAAAACGA+GGG - chr8_1:82827488-82827507 Msa1219890:CDS 45.0%
AGAGCTGAAAGATGCTACCA+CGG + chr8_1:82827603-82827622 None:intergenic 45.0%
ATTTGTGGCGTCACACCATT+GGG + chr8_1:82827632-82827651 None:intergenic 45.0%
AATTTGTGGCGTCACACCAT+TGG + chr8_1:82827633-82827652 None:intergenic 45.0%
ATGTCATGTCCGCACATAAG+TGG - chr8_1:82827876-82827895 Msa1219890:CDS 45.0%
ATTGCACTTGGACTCCATTC+TGG + chr8_1:82827930-82827949 None:intergenic 45.0%
ACAACACAGAGTCTCCCTTA+AGG - chr8_1:82827985-82828004 Msa1219890:CDS 45.0%
CAACACAGAGTCTCCCTTAA+GGG - chr8_1:82827986-82828005 Msa1219890:CDS 45.0%
TCTCCCTTAAGGGATGCAAT+GGG - chr8_1:82827996-82828015 Msa1219890:CDS 45.0%
TCTCCCATTGCATCCCTTAA+GGG + chr8_1:82828002-82828021 None:intergenic 45.0%
AGGTCATGTCAACCCTCAAA+AGG - chr8_1:82828052-82828071 Msa1219890:CDS 45.0%
! CAGGAGATAAGGCCTTTTGA+GGG + chr8_1:82828067-82828086 None:intergenic 45.0%
TCAGCATCATAAACAAGGCC+AGG + chr8_1:82828086-82828105 None:intergenic 45.0%
AAGCGGACACTTACTAACGT+TGG - chr8_1:82828278-82828297 Msa1219890:CDS 45.0%
AGCGGACACTTACTAACGTT+GGG - chr8_1:82828279-82828298 Msa1219890:CDS 45.0%
AACTGTGAATCCTACCAAGC+TGG - chr8_1:82828355-82828374 Msa1219890:CDS 45.0%
TGCTCAAAAACCAGCTTGGT+AGG + chr8_1:82828368-82828387 None:intergenic 45.0%
AAGCAATTGGGCTCCTAACT+TGG + chr8_1:82828499-82828518 None:intergenic 45.0%
!! GGAGCCCAATTGCTTTTACA+TGG - chr8_1:82828504-82828523 Msa1219890:CDS 45.0%
GAAAGAAAGCAGCAGCTGTT+TGG - chr8_1:82828622-82828641 Msa1219890:exon 45.0%
GTGGGATGTTGATGTTGCAA+AGG - chr8_1:82828649-82828668 Msa1219890:five_prime_UTR 45.0%
AGTTGAGGTTGAGGATGCCA+TGG + chr8_1:82826175-82826194 None:intergenic 50.0%
AAGCAGACCCAGAAACTCTG+GGG + chr8_1:82826472-82826491 None:intergenic 50.0%
GAAGCAGACCCAGAAACTCT+GGG + chr8_1:82826473-82826492 None:intergenic 50.0%
TGAAGCAGACCCAGAAACTC+TGG + chr8_1:82826474-82826493 None:intergenic 50.0%
TGCCTCAAATCCCATCTCGA+TGG - chr8_1:82826601-82826620 Msa1219890:CDS 50.0%
ACTTTCCACGCCATCGAGAT+GGG + chr8_1:82826614-82826633 None:intergenic 50.0%
GGTGCTCGAAGCTTCTCTAA+GGG - chr8_1:82826684-82826703 Msa1219890:CDS 50.0%
GTGCTCGAAGCTTCTCTAAG+GGG - chr8_1:82826685-82826704 Msa1219890:CDS 50.0%
TATCTCATGGCATCTCCTGG+TGG - chr8_1:82826708-82826727 Msa1219890:CDS 50.0%
TTCTTTCTACCACCACCACC+AGG + chr8_1:82826726-82826745 None:intergenic 50.0%
GTAGCTAACGCCACTCTTCT+TGG - chr8_1:82826822-82826841 Msa1219890:CDS 50.0%
GGTAGCGTAACCAAGAAGAG+TGG + chr8_1:82826835-82826854 None:intergenic 50.0%
TAAACAGCGATACGTGCCTG+TGG + chr8_1:82826879-82826898 None:intergenic 50.0%
GGCACGTATCGCTGTTTACA+AGG - chr8_1:82826881-82826900 Msa1219890:CDS 50.0%
TCGCTGTTTACAAGGTCTGC+TGG - chr8_1:82826889-82826908 Msa1219890:CDS 50.0%
TATTCCTGCGAGTATGTCGG+AGG + chr8_1:82826931-82826950 None:intergenic 50.0%
! CATCGCAATCGGAGCTTTTG+CGG - chr8_1:82827031-82827050 Msa1219890:intron 50.0%
CGTTATCGAATGTAGCTCCG+TGG - chr8_1:82827114-82827133 Msa1219890:CDS 50.0%
TTTCCGGCTTACGCTACTCT+CGG - chr8_1:82827173-82827192 Msa1219890:CDS 50.0%
TTTCCGAGAGTAGCGTAAGC+CGG + chr8_1:82827179-82827198 None:intergenic 50.0%
GCTTACGCTACTCTCGGAAA+CGG - chr8_1:82827179-82827198 Msa1219890:CDS 50.0%
GGAAACGGAAAACGTTTCGC+CGG - chr8_1:82827194-82827213 Msa1219890:CDS 50.0%
TATGCCCGGTTCACTTGACT+CGG - chr8_1:82827307-82827326 Msa1219890:CDS 50.0%
ATTGCCGAGTCAAGTGAACC+GGG + chr8_1:82827314-82827333 None:intergenic 50.0%
GATTGCCGAGTCAAGTGAAC+CGG + chr8_1:82827315-82827334 None:intergenic 50.0%
!! TGATTGACGCTGGAGGTGTT+GGG - chr8_1:82827399-82827418 Msa1219890:CDS 50.0%
!! TTACATGGTACCGGCCGTTT+CGG - chr8_1:82827472-82827491 Msa1219890:CDS 50.0%
!!! TTTTTTCCCACCGAAACGGC+CGG + chr8_1:82827485-82827504 None:intergenic 50.0%
CGTTTCGGTGGGAAAAAACG+AGG - chr8_1:82827487-82827506 Msa1219890:CDS 50.0%
CCAACGGCTGTGCTTAGTTT+CGG - chr8_1:82827548-82827567 Msa1219890:CDS 50.0%
AAAGATGCTACCACGGGTGA+AGG + chr8_1:82827596-82827615 None:intergenic 50.0%
GAGCTGAAAGATGCTACCAC+GGG + chr8_1:82827602-82827621 None:intergenic 50.0%
GTAGCATCTTTCAGCTCTCG+TGG - chr8_1:82827605-82827624 Msa1219890:CDS 50.0%
TTTGTGGCGTCACACCATTG+GGG + chr8_1:82827631-82827650 None:intergenic 50.0%
AAGCCTGATGTTATTGGGCC+TGG - chr8_1:82827656-82827675 Msa1219890:CDS 50.0%
AACATCTTAGCGGGATGGAC+CGG - chr8_1:82827683-82827702 Msa1219890:CDS 50.0%
! ATGAGCCGCTTTCAACAACG+CGG + chr8_1:82827907-82827926 None:intergenic 50.0%
TGAAAGCGGCTCATCCAGAA+TGG - chr8_1:82827913-82827932 Msa1219890:CDS 50.0%
GTCTCCCTTAAGGGATGCAA+TGG - chr8_1:82827995-82828014 Msa1219890:CDS 50.0%
CTCTCCCATTGCATCCCTTA+AGG + chr8_1:82828003-82828022 None:intergenic 50.0%
CTTAAGGGATGCAATGGGAG+AGG - chr8_1:82828001-82828020 Msa1219890:CDS 50.0%
! CCAGGAGATAAGGCCTTTTG+AGG + chr8_1:82828068-82828087 None:intergenic 50.0%
! CCTCAAAAGGCCTTATCTCC+TGG - chr8_1:82828065-82828084 Msa1219890:CDS 50.0%
TCTACCTATTTGTCTGGCCC+TGG - chr8_1:82828194-82828213 Msa1219890:CDS 50.0%
ATCACCAGGGCCAGACAAAT+AGG + chr8_1:82828201-82828220 None:intergenic 50.0%
GCGGACACTTACTAACGTTG+GGG - chr8_1:82828280-82828299 Msa1219890:CDS 50.0%
! AGTTGTTAGTGGGCCATCCA+CGG - chr8_1:82828325-82828344 Msa1219890:CDS 50.0%
ATTCACAGTTATCCCCACCG+TGG + chr8_1:82828345-82828364 None:intergenic 50.0%
AGGGCTAGGCTACTGCTATT+GGG + chr8_1:82828572-82828591 None:intergenic 50.0%
TAGGGCTAGGCTACTGCTAT+TGG + chr8_1:82828573-82828592 None:intergenic 50.0%
CGCCATCGAGATGGGATTTG+AGG + chr8_1:82826606-82826625 None:intergenic 55.0%
CAAATCCCATCTCGATGGCG+TGG - chr8_1:82826606-82826625 Msa1219890:CDS 55.0%
CACTTTCCACGCCATCGAGA+TGG + chr8_1:82826615-82826634 None:intergenic 55.0%
CGGTGCTCGAAGCTTCTCTA+AGG - chr8_1:82826683-82826702 Msa1219890:CDS 55.0%
GGGTATCTCATGGCATCTCC+TGG - chr8_1:82826705-82826724 Msa1219890:CDS 55.0%
CCTCGTGACAGAGATGGACA+CGG - chr8_1:82826765-82826784 Msa1219890:CDS 55.0%
AAGAGTGGCGTTAGCTACGG+CGG + chr8_1:82826820-82826839 None:intergenic 55.0%
TACCGGAACAGCACGTGGTA+TGG - chr8_1:82826851-82826870 Msa1219890:CDS 55.0%
! AGCCATACCACGTGCTGTTC+CGG + chr8_1:82826856-82826875 None:intergenic 55.0%
TACAAGGTCTGCTGGACCGA+CGG - chr8_1:82826897-82826916 Msa1219890:CDS 55.0%
GTGTTGTCACTCTCACTCGG+TGG - chr8_1:82826978-82826997 Msa1219890:intron 55.0%
CGCAAAAGCTCCGATTGCGA+TGG + chr8_1:82827033-82827052 None:intergenic 55.0%
TCTTGTTCGGCGGGGAATAC+TGG - chr8_1:82827077-82827096 Msa1219890:CDS 55.0%
TTCGATAACGAACCGCTGCG+AGG + chr8_1:82827104-82827123 None:intergenic 55.0%
ATCCAAAGTCCCTGCTCCGA+CGG + chr8_1:82827147-82827166 None:intergenic 55.0%
TCGGAGCAGGGACTTTGGAT+CGG - chr8_1:82827147-82827166 Msa1219890:CDS 55.0%
GCCGGCGTTTCACTTTACAG+TGG - chr8_1:82827212-82827231 Msa1219890:CDS 55.0%
GGAATGGGAAACGAACCGGT+TGG - chr8_1:82827239-82827258 Msa1219890:CDS 55.0%
! GGGAAACGAACCGGTTGGTT+TGG - chr8_1:82827244-82827263 Msa1219890:CDS 55.0%
CTCACGTGTGGAGAAAGGCA+CGG - chr8_1:82827373-82827392 Msa1219890:CDS 55.0%
ACGGTTGTGATTGACGCTGG+AGG - chr8_1:82827392-82827411 Msa1219890:CDS 55.0%
! GTGATTGACGCTGGAGGTGT+TGG - chr8_1:82827398-82827417 Msa1219890:CDS 55.0%
CCGAAACTAAGCACAGCCGT+TGG + chr8_1:82827551-82827570 None:intergenic 55.0%
ACGGCTGTGCTTAGTTTCGG+TGG - chr8_1:82827551-82827570 Msa1219890:CDS 55.0%
ACGCCAGGCCCAATAACATC+AGG + chr8_1:82827662-82827681 None:intergenic 55.0%
GCCTGGCGTGAACATCTTAG+CGG - chr8_1:82827673-82827692 Msa1219890:CDS 55.0%
CCTGGCGTGAACATCTTAGC+GGG - chr8_1:82827674-82827693 Msa1219890:CDS 55.0%
GCGTGAACATCTTAGCGGGA+TGG - chr8_1:82827678-82827697 Msa1219890:CDS 55.0%
CTTCGGGCTCACAAGACACT+CGG - chr8_1:82827717-82827736 Msa1219890:CDS 55.0%
ATGTCCGCACATAAGTGGCG+TGG - chr8_1:82827881-82827900 Msa1219890:CDS 55.0%
ATAAGCCCATGGCGTGGACA+AGG + chr8_1:82828027-82828046 None:intergenic 55.0%
TTGTCCACGCCATGGGCTTA+TGG - chr8_1:82828026-82828045 Msa1219890:CDS 55.0%
TGTCCACGCCATGGGCTTAT+GGG - chr8_1:82828027-82828046 Msa1219890:CDS 55.0%
TGACCTGACCCATAAGCCCA+TGG + chr8_1:82828038-82828057 None:intergenic 55.0%
ACAGTTATCCCCACCGTGGA+TGG + chr8_1:82828341-82828360 None:intergenic 55.0%
! CAGCAGCTGTTTGGAGCTGT+GGG - chr8_1:82828631-82828650 Msa1219890:five_prime_UTR 55.0%
TACCCGCACCCCAGAGTTTC+TGG - chr8_1:82826461-82826480 Msa1219890:CDS 60.0%
ACCCGCACCCCAGAGTTTCT+GGG - chr8_1:82826462-82826481 Msa1219890:CDS 60.0%
!! ACCCAGAAACTCTGGGGTGC+GGG + chr8_1:82826466-82826485 None:intergenic 60.0%
!! GACCCAGAAACTCTGGGGTG+CGG + chr8_1:82826467-82826486 None:intergenic 60.0%
CTCATGGCATCTCCTGGTGG+TGG - chr8_1:82826711-82826730 Msa1219890:CDS 60.0%
!! ATGGCATCTCCTGGTGGTGG+TGG - chr8_1:82826714-82826733 Msa1219890:CDS 60.0%
CCGTGTCCATCTCTGTCACG+AGG + chr8_1:82826768-82826787 None:intergenic 60.0%
! AGCAGCGGTGGTGGCAGTAT+GGG + chr8_1:82826793-82826812 None:intergenic 60.0%
TACGCTACCGGAACAGCACG+TGG - chr8_1:82826846-82826865 Msa1219890:CDS 60.0%
AGCACGTGGTATGGCTCCAC+AGG - chr8_1:82826860-82826879 Msa1219890:CDS 60.0%
GTCGGAGGCGAAACAACCGT+CGG + chr8_1:82826916-82826935 None:intergenic 60.0%
TTCGCCTCCGACATACTCGC+AGG - chr8_1:82826924-82826943 Msa1219890:intron 60.0%
! CGCAATCGGAGCTTTTGCGG+CGG - chr8_1:82827034-82827053 Msa1219890:CDS 60.0%
! AATCGGAGCTTTTGCGGCGG+TGG - chr8_1:82827037-82827056 Msa1219890:CDS 60.0%
! CTTTTGCGGCGGTGGAGAGA+GGG - chr8_1:82827045-82827064 Msa1219890:CDS 60.0%
GGCGGTGGAGAGAGGGATAT+TGG - chr8_1:82827052-82827071 Msa1219890:CDS 60.0%
GGGAATACTGGACCTCGCAG+CGG - chr8_1:82827089-82827108 Msa1219890:CDS 60.0%
GCTCCGTGGATCATGACCGT+CGG - chr8_1:82827128-82827147 Msa1219890:CDS 60.0%
GCTCCGACGGTCATGATCCA+CGG + chr8_1:82827134-82827153 None:intergenic 60.0%
TGGATCATGACCGTCGGAGC+AGG - chr8_1:82827134-82827153 Msa1219890:CDS 60.0%
GGATCATGACCGTCGGAGCA+GGG - chr8_1:82827135-82827154 Msa1219890:CDS 60.0%
CGGAGCAGGGACTTTGGATC+GGG - chr8_1:82827148-82827167 Msa1219890:CDS 60.0%
!! CTTGACTCGGCAATCGTGCG+CGG - chr8_1:82827320-82827339 Msa1219890:CDS 60.0%
!! TTGACTCGGCAATCGTGCGC+GGG - chr8_1:82827321-82827340 Msa1219890:CDS 60.0%
GGCACGGTTGTGATTGACGC+TGG - chr8_1:82827389-82827408 Msa1219890:CDS 60.0%
!! ATGGTACCGGCCGTTTCGGT+GGG - chr8_1:82827476-82827495 Msa1219890:CDS 60.0%
GAACGTGAGACCTTCACCCG+TGG - chr8_1:82827583-82827602 Msa1219890:CDS 60.0%
TTCAGCTCTCGTGGCCCCAA+TGG - chr8_1:82827614-82827633 Msa1219890:CDS 60.0%
CCCGCTAAGATGTTCACGCC+AGG + chr8_1:82827677-82827696 None:intergenic 60.0%
CGAGTGTCTTGTGAGCCCGA+AGG + chr8_1:82827719-82827738 None:intergenic 60.0%
CGTGGCCGCGTTGTTGAAAG+CGG - chr8_1:82827899-82827918 Msa1219890:CDS 60.0%
! AGAGGCCTTGTCCACGCCAT+GGG - chr8_1:82828019-82828038 Msa1219890:CDS 60.0%
TGACCCATAAGCCCATGGCG+TGG + chr8_1:82828033-82828052 None:intergenic 60.0%
ACGCCATGGGCTTATGGGTC+AGG - chr8_1:82828032-82828051 Msa1219890:CDS 60.0%
! TGTTAGTGGGCCATCCACGG+TGG - chr8_1:82828328-82828347 Msa1219890:CDS 60.0%
! GTTAGTGGGCCATCCACGGT+GGG - chr8_1:82828329-82828348 Msa1219890:CDS 60.0%
! TTAGTGGGCCATCCACGGTG+GGG - chr8_1:82828330-82828349 Msa1219890:CDS 60.0%
! GCAGCAGCTGTTTGGAGCTG+TGG - chr8_1:82828630-82828649 Msa1219890:five_prime_UTR 60.0%
! CAGCAGCGGTGGTGGCAGTA+TGG + chr8_1:82826794-82826813 None:intergenic 65.0%
CATACTGCCACCACCGCTGC+TGG - chr8_1:82826792-82826811 Msa1219890:CDS 65.0%
! GCTTTTGCGGCGGTGGAGAG+AGG - chr8_1:82827044-82827063 Msa1219890:CDS 65.0%
GACCGTCGGAGCAGGGACTT+TGG - chr8_1:82827142-82827161 Msa1219890:CDS 65.0%
GGCAATCGTGCGCGGGAAAG+TGG - chr8_1:82827328-82827347 Msa1219890:CDS 65.0%
CTTGCAAACACGGCGGCGAG+CGG - chr8_1:82827428-82827447 Msa1219890:CDS 65.0%
!! CATGGTACCGGCCGTTTCGG+TGG - chr8_1:82827475-82827494 Msa1219890:CDS 65.0%
GCGGCCACGCCACTTATGTG+CGG + chr8_1:82827888-82827907 None:intergenic 65.0%
! GAGAGGCCTTGTCCACGCCA+TGG - chr8_1:82828018-82828037 Msa1219890:CDS 65.0%
AGCTACGGCGGAGCCAGCAG+CGG + chr8_1:82826808-82826827 None:intergenic 70.0%
AACACGGCGGCGAGCGGTGA+AGG - chr8_1:82827434-82827453 Msa1219890:CDS 70.0%
GGCGAGCGGTGAAGGAGTGG+TGG - chr8_1:82827442-82827461 Msa1219890:CDS 70.0%
CGGGATGGACCGGCGCTGTT+GGG - chr8_1:82827693-82827712 Msa1219890:CDS 70.0%
GACCGGCGCTGTTGGGCCTT+CGG - chr8_1:82827700-82827719 Msa1219890:CDS 70.0%
ACCGGCGCTGTTGGGCCTTC+GGG - chr8_1:82827701-82827720 Msa1219890:CDS 70.0%
TACGGCGGAGCCAGCAGCGG+TGG + chr8_1:82826805-82826824 None:intergenic 75.0%
GGCGGCGAGCGGTGAAGGAG+TGG - chr8_1:82827439-82827458 Msa1219890:CDS 75.0%
GCGGGATGGACCGGCGCTGT+TGG - chr8_1:82827692-82827711 Msa1219890:CDS 75.0%
GCCCGAAGGCCCAACAGCGC+CGG + chr8_1:82827705-82827724 None:intergenic 75.0%
! GGCGGAGCCAGCAGCGGTGG+TGG + chr8_1:82826802-82826821 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 82825992 82828804 82825992 ID=Msa1219890;Name=Msa1219890
chr8_1 mRNA 82825992 82828804 82825992 ID=Msa1219890-mRNA-1;Parent=Msa1219890;Name=Msa1219890-mRNA-1;_AED=0.01;_eAED=0.01;_QI=182|1|1|1|1|1|2|266|753
chr8_1 exon 82825992 82826928 82825992 ID=Msa1219890-mRNA-1:exon:29638;Parent=Msa1219890-mRNA-1
chr8_1 exon 82827032 82828804 82827032 ID=Msa1219890-mRNA-1:exon:29637;Parent=Msa1219890-mRNA-1
chr8_1 five_prime_UTR 82828623 82828804 82828623 ID=Msa1219890-mRNA-1:five_prime_utr;Parent=Msa1219890-mRNA-1
chr8_1 CDS 82827032 82828622 82827032 ID=Msa1219890-mRNA-1:cds;Parent=Msa1219890-mRNA-1
chr8_1 CDS 82826258 82826928 82826258 ID=Msa1219890-mRNA-1:cds;Parent=Msa1219890-mRNA-1
chr8_1 three_prime_UTR 82825992 82826257 82825992 ID=Msa1219890-mRNA-1:three_prime_utr;Parent=Msa1219890-mRNA-1
Gene Sequence

>Msa1219890

ATGGCATCCTCAACCTCAACTTTGTATCTTCTTGTAATGCTATTATTATCTGCTACAGTAATGGCATTGACCAACAAAAAAACTTACATAGTTCACATGAAACACAACAAAAATGCATCCATGTACTCTCCCATTCTCCAATCTTCTTCTTCCGATTCTCTACTTTACACCTACACTCACTCTTACAACGGTTTTGCTGCTTCCCTTGACACTCAACAAGTGCAAGCACTGCGTAGTTCTGATTCAGTTCTAGGTGTATATGAAGATACTCTGTACTCGCTGCACACTACCCGCACCCCAGAGTTTCTGGGTCTGCTTCAAATTCAAACCCATTCTCAGTTTCTTCACCAAACTTCATACGACGTAGTTATCGGTGTACTTGACACTGGAGTATGGCCAGAATCGCAAAGTTTTCATGATTCTCAAATGCCTCAAATCCCATCTCGATGGCGTGGAAAGTGTGAATCAGCACCAGATTTCGATTCTTCACTCTGTAACAAAAAACTCATCGGTGCTCGAAGCTTCTCTAAGGGGTATCTCATGGCATCTCCTGGTGGTGGTGGTAGAAAGAAAGCAGTTGATCCTATTTCACCTCGTGACAGAGATGGACACGGTACCCATACTGCCACCACCGCTGCTGGCTCCGCCGTAGCTAACGCCACTCTTCTTGGTTACGCTACCGGAACAGCACGTGGTATGGCTCCACAGGCACGTATCGCTGTTTACAAGGTCTGCTGGACCGACGGTTGTTTCGCCTCCGACATACTCGCAGGAATAGATCAAGCGATTCAAGACGGTGTTGATGTGTTGTCACTCTCACTCGGTGGTTCATCATCCACTCCTTACTATTTCGACACCATCGCAATCGGAGCTTTTGCGGCGGTGGAGAGAGGGATATTGGTTTCTTGTTCGGCGGGGAATACTGGACCTCGCAGCGGTTCGTTATCGAATGTAGCTCCGTGGATCATGACCGTCGGAGCAGGGACTTTGGATCGGGATTTTCCGGCTTACGCTACTCTCGGAAACGGAAAACGTTTCGCCGGCGTTTCACTTTACAGTGGAGAAGGAATGGGAAACGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTTAATTCATCGAGTAGTATATGTATGCCCGGTTCACTTGACTCGGCAATCGTGCGCGGGAAAGTGGTTGTATGTGATAGAGGTGTAAACTCACGTGTGGAGAAAGGCACGGTTGTGATTGACGCTGGAGGTGTTGGGATGATTCTTGCAAACACGGCGGCGAGCGGTGAAGGAGTGGTGGCTGATAGTTACATGGTACCGGCCGTTTCGGTGGGAAAAAACGAGGGTGATGAGATTAAAAAGTATGCAGCGTTGGATTCTAATCCAACGGCTGTGCTTAGTTTCGGTGGAACTGTGTTGAACGTGAGACCTTCACCCGTGGTAGCATCTTTCAGCTCTCGTGGCCCCAATGGTGTGACGCCACAAATTCTGAAGCCTGATGTTATTGGGCCTGGCGTGAACATCTTAGCGGGATGGACCGGCGCTGTTGGGCCTTCGGGCTCACAAGACACTCGGATAGCCCAATTCAATATCATGTCTGGAACGTCGATGTCATGTCCGCACATAAGTGGCGTGGCCGCGTTGTTGAAAGCGGCTCATCCAGAATGGAGTCCAAGTGCAATCAAATCAGCTCTGATGACAACAGCTTATACACTTGACAACACAGAGTCTCCCTTAAGGGATGCAATGGGAGAGGCCTTGTCCACGCCATGGGCTTATGGGTCAGGTCATGTCAACCCTCAAAAGGCCTTATCTCCTGGCCTTGTTTATGATGCTGACACTGAAGACTACATTGCATTCTTATGCTCTCTGAACTACACACTTGACCATGTGAAACTCATTGTCAAGCGTCCTAATGTTACTTGTTCTACCTATTTGTCTGGCCCTGGTGATCTTAATTACCCATCATTTTCTGTTGTTTTTGGAAACAATAGTGGTGTTGTTCAATACAAGCGGACACTTACTAACGTTGGGGAAGCAGAATCTGTTTATGATGTAGTTGTTAGTGGGCCATCCACGGTGGGGATAACTGTGAATCCTACCAAGCTGGTTTTTGAGCAAGTTGGTGAAAGGCAAACATATATGGTTAAGTTTATATCAAACAAAGATATTGTTGATGATTCGGTTACGTCTGAATTTGGCAGTATTACGTGGAGCAACAAACAACACCAAGTTAGGAGCCCAATTGCTTTTACATGGACAATTCTATGA
Protein sequence

>Msa1219890

MASSTSTLYLLVMLLLSATVMALTNKKTYIVHMKHNKNASMYSPILQSSSSDSLLYTYTHSYNGFAASLDTQQVQALRSSDSVLGVYEDTLYSLHTTRTPEFLGLLQIQTHSQFLHQTSYDVVIGVLDTGVWPESQSFHDSQMPQIPSRWRGKCESAPDFDSSLCNKKLIGARSFSKGYLMASPGGGGRKKAVDPISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTDGCFASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTIAIGAFAAVERGILVSCSAGNTGPRSGSLSNVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDSAIVRGKVVVCDRGVNSRVEKGTVVIDAGGVGMILANTAASGEGVVADSYMVPAVSVGKNEGDEIKKYAALDSNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDVIGPGVNILAGWTGAVGPSGSQDTRIAQFNIMSGTSMSCPHISGVAALLKAAHPEWSPSAIKSALMTTAYTLDNTESPLRDAMGEALSTPWAYGSGHVNPQKALSPGLVYDADTEDYIAFLCSLNYTLDHVKLIVKRPNVTCSTYLSGPGDLNYPSFSVVFGNNSGVVQYKRTLTNVGEAESVYDVVVSGPSTVGITVNPTKLVFEQVGERQTYMVKFISNKDIVDDSVTSEFGSITWSNKQHQVRSPIAFTWTIL*