AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1458320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458320 MtrunA17_Chr4g0070391 96.301 757 23 3 61 813 1 756 0.0 1493
Msa1458320 MtrunA17_Chr2g0300751 66.921 786 218 9 61 813 1 777 0.0 1046
Msa1458320 MtrunA17_Chr4g0053781 52.097 739 330 12 86 810 28 756 0.0 739
Msa1458320 MtrunA17_Chr1g0204321 48.219 786 360 12 57 810 8 778 0.0 738
Msa1458320 MtrunA17_Chr5g0401511 50.453 773 357 14 57 812 1 764 0.0 736
Msa1458320 MtrunA17_Chr1g0152771 49.354 774 360 10 61 811 1 765 0.0 709
Msa1458320 MtrunA17_Chr4g0037221 50.629 715 327 11 113 809 62 768 0.0 708
Msa1458320 MtrunA17_Chr8g0344331 49.538 757 335 17 87 811 36 777 0.0 704
Msa1458320 MtrunA17_Chr4g0020651 50.521 768 357 14 59 812 2 760 0.0 702
Msa1458320 MtrunA17_Chr3g0134621 51.105 769 312 16 68 811 9 738 0.0 691
Msa1458320 MtrunA17_Chr8g0344971 46.005 776 363 14 69 809 6 760 0.0 647
Msa1458320 MtrunA17_Chr7g0262161 46.988 747 362 13 88 810 26 762 0.0 641
Msa1458320 MtrunA17_Chr7g0246461 44.885 782 346 20 68 810 6 741 0.0 600
Msa1458320 MtrunA17_Chr3g0120521 43.593 718 365 16 109 806 70 767 0.0 574
Msa1458320 MtrunA17_Chr4g0057061 41.708 808 428 16 12 811 5 777 0.0 570
Msa1458320 MtrunA17_Chr5g0407701 41.948 770 400 16 61 806 1 747 0.0 560
Msa1458320 MtrunA17_Chr8g0369891 41.896 728 385 13 90 806 50 750 0.0 557
Msa1458320 MtrunA17_Chr4g0076611 43.220 708 372 14 114 807 1 692 0.0 554
Msa1458320 MtrunA17_Chr2g0285121 43.306 732 368 15 113 810 66 784 0.0 548
Msa1458320 MtrunA17_Chr5g0398241 44.430 745 359 16 85 807 41 752 0.0 545
Msa1458320 MtrunA17_Chr5g0398401 44.430 745 359 16 85 807 41 752 0.0 543
Msa1458320 MtrunA17_Chr2g0285111 42.877 737 375 15 107 810 64 787 0.0 539
Msa1458320 MtrunA17_Chr4g0057531 42.978 712 381 12 110 806 73 774 0.0 538
Msa1458320 MtrunA17_Chr7g0276151 40.736 788 396 19 61 809 1 756 0.0 538
Msa1458320 MtrunA17_Chr5g0398351 44.772 746 355 17 85 807 792 1503 2.19e-180 558
Msa1458320 MtrunA17_Chr5g0398351 43.531 742 369 15 85 807 22 732 1.12e-173 540
Msa1458320 MtrunA17_Chr5g0398311 44.249 739 363 15 88 810 43 748 5.62e-180 535
Msa1458320 MtrunA17_Chr4g0057471 42.039 716 391 14 110 812 8 712 2.06e-178 530
Msa1458320 MtrunA17_Chr5g0398331 43.011 744 369 17 88 810 43 752 4.20e-178 530
Msa1458320 MtrunA17_Chr4g0026641 40.495 768 413 17 64 806 3 751 5.01e-178 530
Msa1458320 MtrunA17_Chr4g0057481 43.759 681 360 14 142 810 22 691 1.24e-176 524
Msa1458320 MtrunA17_Chr8g0345981 39.873 785 406 21 63 809 2 758 4.40e-175 523
Msa1458320 MtrunA17_Chr8g0345971 41.958 715 373 18 106 806 70 756 1.05e-174 522
Msa1458320 MtrunA17_Chr7g0248871 38.804 786 403 22 67 806 8 761 1.49e-174 521
Msa1458320 MtrunA17_Chr1g0189251 40.556 720 378 18 106 809 69 754 1.64e-173 519
Msa1458320 MtrunA17_Chr8g0345991 39.130 782 415 22 61 809 1 754 2.59e-171 513
Msa1458320 MtrunA17_Chr5g0423261 44.584 637 323 14 189 810 2 623 3.89e-166 495
Msa1458320 MtrunA17_Chr1g0189561 38.961 770 414 21 71 806 11 758 7.23e-166 499
Msa1458320 MtrunA17_Chr3g0136151 39.446 758 397 18 85 809 34 762 1.86e-164 495
Msa1458320 MtrunA17_Chr4g0057491 43.492 630 338 11 190 810 3 623 2.60e-164 490
Msa1458320 MtrunA17_Chr4g0057461 43.128 633 339 14 190 808 3 628 1.17e-162 486
Msa1458320 MtrunA17_Chr8g0354771 40.999 761 403 19 79 807 16 762 3.91e-162 489
Msa1458320 MtrunA17_Chr8g0377961 39.895 762 413 17 74 807 29 773 6.31e-161 487
Msa1458320 MtrunA17_Chr4g0057511 43.860 627 330 13 194 810 3 617 2.36e-160 480
Msa1458320 MtrunA17_Chr7g0250411 41.015 729 389 21 107 808 69 783 2.90e-159 483
Msa1458320 MtrunA17_Chr8g0345961 38.101 790 419 20 61 811 1 759 1.88e-158 480
Msa1458320 MtrunA17_Chr7g0250481 38.949 742 397 20 107 806 68 795 1.79e-157 478
Msa1458320 MtrunA17_Chr3g0143251 38.501 787 407 20 68 809 11 765 1.52e-156 475
Msa1458320 MtrunA17_Chr7g0250391 39.796 784 407 24 70 806 15 780 3.08e-156 475
Msa1458320 MtrunA17_Chr7g0250371 40.959 730 385 23 107 806 69 782 3.82e-155 472
Msa1458320 MtrunA17_Chr2g0303881 41.528 720 363 22 114 809 41 726 7.67e-154 467
Msa1458320 MtrunA17_Chr7g0227991 36.965 771 405 20 68 806 10 731 2.04e-149 456
Msa1458320 MtrunA17_Chr8g0354741 42.768 643 328 14 179 807 16 632 3.07e-149 452
Msa1458320 MtrunA17_Chr8g0351011 39.522 711 376 20 110 806 79 749 3.20e-149 456
Msa1458320 MtrunA17_Chr7g0246451 38.787 709 384 21 110 806 73 743 3.73e-148 452
Msa1458320 MtrunA17_Chr7g0266051 39.720 715 365 21 113 806 34 703 2.46e-147 449
Msa1458320 MtrunA17_Chr6g0470851 37.268 754 410 20 71 806 19 727 8.83e-146 446
Msa1458320 MtrunA17_Chr8g0334521 36.516 775 416 20 61 806 4 731 2.62e-145 445
Msa1458320 MtrunA17_Chr6g0470881 37.135 754 411 20 71 806 19 727 4.61e-144 442
Msa1458320 MtrunA17_Chr7g0250331 39.366 757 381 25 107 806 69 804 5.71e-144 444
Msa1458320 MtrunA17_Chr1g0146251 36.554 766 404 20 71 806 19 732 3.26e-142 437
Msa1458320 MtrunA17_Chr1g0146271 35.934 782 413 21 61 806 1 730 5.20e-141 434
Msa1458320 MtrunA17_Chr3g0079971 36.068 768 415 22 68 806 9 729 5.22e-141 434
Msa1458320 MtrunA17_Chr1g0170081 35.809 754 422 18 71 806 19 728 1.06e-140 433
Msa1458320 MtrunA17_Chr5g0439271 41.408 611 308 18 227 806 8 599 5.69e-139 424
Msa1458320 MtrunA17_Chr7g0248861 40.803 598 319 14 76 663 50 622 9.82e-139 432
Msa1458320 MtrunA17_Chr7g0248861 53.275 229 100 4 181 408 637 859 7.30e-67 238
Msa1458320 MtrunA17_Chr8g0334491 36.898 748 389 25 87 806 33 725 7.87e-132 410
Msa1458320 MtrunA17_Chr8g0376841 40.309 583 285 18 80 629 33 585 5.68e-117 367
Msa1458320 MtrunA17_Chr4g0071871 33.761 779 424 28 88 806 65 811 2.69e-109 353
Msa1458320 MtrunA17_Chr5g0447171 37.354 514 259 8 343 807 7 506 8.29e-105 332
Msa1458320 MtrunA17_Chr2g0298601 34.416 770 431 27 88 806 65 811 6.72e-104 338
Msa1458320 MtrunA17_Chr2g0301011 35.252 556 279 14 143 693 4 483 2.24e-96 309
Msa1458320 MtrunA17_Chr2g0302951 33.509 758 419 28 115 812 110 842 2.66e-93 311
Msa1458320 MtrunA17_Chr8g0380961 33.912 749 417 27 115 807 118 844 5.51e-93 310
Msa1458320 MtrunA17_Chr4g0075331 33.147 715 412 22 105 768 2 701 5.97e-92 305
Msa1458320 MtrunA17_Chr3g0143241 37.759 482 238 16 68 512 11 467 2.14e-83 277
Msa1458320 MtrunA17_Chr7g0261691 43.235 340 170 7 186 512 13 342 1.71e-82 268
Msa1458320 MtrunA17_Chr7g0250461 39.563 412 225 11 107 500 69 474 5.95e-81 268
Msa1458320 MtrunA17_Chr7g0261701 43.537 294 150 8 516 806 7 287 1.62e-70 234
Msa1458320 MtrunA17_Chr4g0026651 42.308 312 146 6 132 412 5 313 7.35e-70 233
Msa1458320 MtrunA17_Chr4g0035881 40.000 365 161 6 268 625 4 317 3.31e-69 231
Msa1458320 MtrunA17_Chr6g0480721 40.575 313 160 6 101 411 1 289 1.78e-67 236
Msa1458320 MtrunA17_Chr6g0480721 41.158 311 155 10 506 806 305 597 7.44e-59 211
Msa1458320 MtrunA17_Chr7g0250441 44.444 279 145 7 533 808 11 282 1.07e-62 213
Msa1458320 MtrunA17_Chr3g0097061 39.062 320 164 7 143 455 4 299 1.66e-60 211
Msa1458320 MtrunA17_Chr3g0097061 46.729 107 49 2 585 691 331 429 3.09e-24 106
Msa1458320 MtrunA17_Chr3g0105451 38.621 290 151 6 528 809 9 279 9.67e-59 201
Msa1458320 MtrunA17_Chr8g0346361 42.199 282 147 8 529 806 225 494 1.04e-57 205
Msa1458320 MtrunA17_Chr8g0346361 47.525 202 85 4 206 406 7 188 1.13e-49 182
Msa1458320 MtrunA17_Chr4g0026661 43.701 254 134 6 554 806 12 257 2.13e-57 197
Msa1458320 MtrunA17_Chr3g0105461 37.892 351 160 8 67 404 14 319 1.26e-55 195
Msa1458320 MtrunA17_Chr3g0103071 35.374 294 162 4 316 592 1 283 2.01e-53 187
Msa1458320 MtrunA17_Chr2g0301911 33.241 361 205 9 203 557 30 360 5.54e-47 172
Msa1458320 MtrunA17_Chr2g0312861 36.015 261 142 9 554 806 1 244 6.34e-45 164
Msa1458320 MtrunA17_Chr2g0301031 37.743 257 143 8 554 806 1 244 1.10e-43 158
Msa1458320 MtrunA17_Chr4g0071191 39.726 219 119 6 519 734 42 250 1.40e-39 147
Msa1458320 MtrunA17_Chr2g0312841 41.579 190 91 3 206 394 12 182 4.23e-39 143
Msa1458320 MtrunA17_Chr5g0436021 45.562 169 77 2 228 394 31 186 3.40e-37 137
Msa1458320 MtrunA17_Chr3g0103061 34.328 268 142 8 64 306 2 260 1.18e-36 139
Msa1458320 MtrunA17_Chr2g0301921 36.574 216 121 7 594 806 1 203 1.61e-34 130
Msa1458320 MtrunA17_Chr2g0301021 28.935 432 187 14 67 479 13 343 2.26e-34 135
Msa1458320 MtrunA17_Chr5g0418921 46.715 137 69 3 523 656 1 136 1.49e-32 124
Msa1458320 MtrunA17_Chr3g0142981 44.737 152 48 3 259 404 50 171 1.11e-26 108
Msa1458320 MtrunA17_Chr8g0376851 35.976 164 97 5 648 807 11 170 5.53e-26 105
Msa1458320 MtrunA17_Chr5g0436031 36.095 169 101 4 640 806 15 178 2.75e-24 102
Msa1458320 MtrunA17_Chr3g0103081 34.247 146 90 3 661 806 1 140 7.84e-21 89.7
Msa1458320 MtrunA17_Chr3g0143021 40.196 102 60 1 113 214 6 106 3.17e-20 86.7
Msa1458320 MtrunA17_Chr3g0142971 51.765 85 41 0 537 621 1 85 3.44e-20 85.9
Msa1458320 MtrunA17_Chr5g0398341 47.423 97 50 1 594 690 1 96 1.05e-19 84.7
Msa1458320 MtrunA17_Chr3g0143231 48.315 89 46 0 537 625 1 89 3.95e-19 82.8
Msa1458320 MtrunA17_Chr3g0143221 30.435 184 99 5 633 809 2 163 1.23e-17 81.3
Msa1458320 MtrunA17_Chr7g0248851 34.437 151 89 5 661 807 1 145 1.45e-17 80.5
Msa1458320 MtrunA17_Chr4g0035871 34.965 143 64 3 101 227 21 150 1.78e-17 80.5
Msa1458320 MtrunA17_Chr3g0077671 52.857 70 32 1 585 653 237 306 9.80e-17 82.0
Msa1458320 MtrunA17_Chr8g0346961 37.190 121 66 5 623 737 1 117 1.14e-16 76.6
Msa1458320 MtrunA17_Chr5g0439281 30.814 172 90 8 86 229 27 197 2.02e-14 72.8
Msa1458320 MtrunA17_Chr8g0346351 34.459 148 82 4 65 200 12 156 8.12e-14 70.5
Msa1458320 MtrunA17_Chr3g0143011 58.000 50 21 0 355 404 1 50 3.37e-13 65.5
Msa1458320 MtrunA17_Chr3g0142961 30.657 137 89 3 633 764 2 137 7.60e-13 66.6
Msa1458320 MtrunA17_Chr8g0354731 37.288 118 59 4 87 189 52 169 1.48e-12 66.6
Msa1458320 MtrunA17_Chr5g0434941 47.297 74 36 1 321 391 1 74 4.68e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458320 AT2G05920.1 65.633 742 233 10 80 810 21 751 0.0 973
Msa1458320 AT5G67360.1 53.421 760 333 12 64 811 7 757 0.0 769
Msa1458320 AT3G14067.1 50.390 770 353 13 63 810 7 769 0.0 731
Msa1458320 AT4G34980.1 49.020 765 368 12 61 809 1 759 0.0 713
Msa1458320 AT5G51750.1 48.020 783 371 11 54 810 4 776 0.0 712
Msa1458320 AT3G14240.1 48.999 749 350 12 88 809 27 770 0.0 691
Msa1458320 AT1G04110.1 45.655 771 378 14 71 809 10 771 0.0 626
Msa1458320 AT1G01900.1 44.533 750 378 14 84 810 39 773 0.0 587
Msa1458320 AT2G04160.1 43.672 719 368 16 107 806 68 768 0.0 570
Msa1458320 AT5G45650.2 42.583 782 377 19 85 809 23 789 0.0 546
Msa1458320 AT5G45650.1 42.583 782 377 19 85 809 23 789 0.0 546
Msa1458320 AT5G59810.1 42.378 715 377 15 107 806 78 772 0.0 540
Msa1458320 AT1G20160.1 40.051 784 397 21 66 809 12 762 4.80e-163 492
Msa1458320 AT1G20160.2 41.040 731 367 18 111 809 25 723 4.27e-161 486
Msa1458320 AT4G10520.1 38.810 773 429 20 61 813 1 749 1.19e-160 486
Msa1458320 AT4G10540.1 40.434 737 380 19 107 813 61 768 8.69e-155 471
Msa1458320 AT4G10550.4 40.659 728 390 16 107 813 9 715 2.02e-154 468
Msa1458320 AT4G10550.2 40.659 728 390 16 107 813 9 715 2.02e-154 468
Msa1458320 AT4G10550.1 40.659 728 390 16 107 813 65 771 2.56e-154 470
Msa1458320 AT4G10550.3 40.659 728 390 16 107 813 81 787 9.66e-154 469
Msa1458320 AT5G59090.1 39.247 744 384 22 85 806 29 726 5.94e-152 462
Msa1458320 AT5G67090.1 37.995 758 398 19 71 800 5 718 3.55e-151 461
Msa1458320 AT5G59090.3 39.247 744 382 23 85 806 29 724 1.67e-150 459
Msa1458320 AT5G59090.2 38.978 744 381 21 85 806 29 721 4.40e-150 457
Msa1458320 AT1G20150.1 37.615 763 410 19 89 809 33 771 6.93e-150 459
Msa1458320 AT1G66220.1 37.032 775 423 19 61 807 6 743 1.13e-149 457
Msa1458320 AT5G59120.1 39.008 746 383 21 85 806 28 725 4.07e-149 455
Msa1458320 AT1G32960.1 39.474 760 413 19 84 813 28 770 5.11e-149 456
Msa1458320 AT5G58840.1 37.789 778 391 23 61 812 1 711 2.53e-148 452
Msa1458320 AT4G10530.1 37.760 768 418 19 69 813 10 740 5.11e-148 452
Msa1458320 AT5G59100.1 38.153 747 395 22 85 806 31 735 5.50e-148 452
Msa1458320 AT4G10510.4 39.945 726 397 17 107 813 9 714 8.12e-148 451
Msa1458320 AT4G10510.2 40.195 719 391 17 114 813 1 699 1.81e-147 450
Msa1458320 AT4G10510.1 39.945 726 397 17 107 813 53 758 1.81e-147 452
Msa1458320 AT3G46840.1 38.270 763 407 20 66 806 12 732 3.27e-147 450
Msa1458320 AT4G26330.2 38.889 720 406 17 107 806 14 719 3.52e-147 450
Msa1458320 AT4G10510.3 39.945 726 397 17 107 813 65 770 4.63e-147 451
Msa1458320 AT4G00230.1 38.889 720 379 18 105 806 65 741 6.20e-147 450
Msa1458320 AT1G32940.4 39.566 738 399 19 101 813 1 716 2.09e-146 447
Msa1458320 AT1G32940.2 39.566 738 399 19 101 813 1 716 2.09e-146 447
Msa1458320 AT1G32940.1 39.566 738 399 19 101 813 52 767 1.16e-145 447
Msa1458320 AT5G59130.4 37.206 766 398 23 69 806 13 723 2.84e-145 445
Msa1458320 AT5G03620.1 37.769 789 400 22 68 806 9 756 3.01e-144 444
Msa1458320 AT1G32950.1 38.126 779 434 18 65 813 6 766 3.03e-144 444
Msa1458320 AT5G59130.1 37.337 766 393 24 69 806 13 719 4.15e-144 442
Msa1458320 AT5G59130.2 37.337 766 387 23 69 806 13 713 1.11e-143 441
Msa1458320 AT5G58820.1 38.228 756 385 21 69 806 7 698 2.37e-143 439
Msa1458320 AT1G66210.1 36.518 764 429 20 68 807 18 749 4.09e-143 440
Msa1458320 AT4G26330.1 38.147 734 406 18 107 806 14 733 4.82e-143 440
Msa1458320 AT1G32950.2 39.563 733 405 17 101 813 1 715 6.67e-143 439
Msa1458320 AT5G59190.1 39.803 711 364 21 109 806 27 686 2.73e-142 436
Msa1458320 AT4G21650.1 37.042 764 410 19 84 812 37 764 1.87e-141 436
Msa1458320 AT5G58830.1 36.364 759 399 18 66 806 11 703 2.02e-141 434
Msa1458320 AT3G46850.1 37.582 761 416 20 66 806 11 732 2.91e-141 435
Msa1458320 AT5G59130.3 37.414 727 387 20 93 806 13 684 1.11e-140 432
Msa1458320 AT4G21630.1 37.403 770 412 21 75 812 26 757 1.60e-138 428
Msa1458320 AT5G11940.1 38.790 727 388 20 107 813 68 757 3.00e-136 422
Msa1458320 AT4G21640.1 36.835 771 387 21 75 812 28 731 1.09e-134 417
Msa1458320 AT5G45640.1 37.802 746 373 19 121 807 37 750 1.57e-134 418
Msa1458320 AT4G21323.1 37.167 713 407 16 107 808 111 793 2.63e-127 400
Msa1458320 AT4G15040.2 36.871 735 400 22 82 806 3 683 1.64e-124 390
Msa1458320 AT4G15040.1 36.871 735 400 22 82 806 3 683 1.64e-124 390
Msa1458320 AT4G21326.1 36.749 732 404 22 101 813 1 692 8.63e-121 380
Msa1458320 AT5G03620.2 40.101 596 290 15 68 625 9 575 5.46e-119 372
Msa1458320 AT1G32970.1 39.347 582 320 13 248 813 163 727 1.29e-115 368
Msa1458320 AT1G32940.3 41.176 561 291 15 101 637 52 597 2.25e-113 358
Msa1458320 AT4G00230.2 40.748 535 272 12 105 625 65 568 2.16e-112 355
Msa1458320 AT5G58840.3 37.778 585 290 14 61 625 1 531 6.23e-111 350
Msa1458320 AT2G19170.1 34.278 776 436 26 84 806 54 808 4.27e-107 347
Msa1458320 AT2G19170.2 34.278 776 436 26 84 806 54 808 4.27e-107 347
Msa1458320 AT4G30020.3 33.677 775 432 25 88 806 61 809 3.94e-104 340
Msa1458320 AT4G30020.1 33.677 775 432 25 88 806 61 809 3.94e-104 340
Msa1458320 AT4G30020.4 33.677 775 432 25 88 806 61 809 3.94e-104 340
Msa1458320 AT4G30020.2 33.677 775 432 25 88 806 61 809 3.94e-104 340
Msa1458320 AT4G20430.3 33.377 764 413 26 115 812 119 852 6.95e-101 332
Msa1458320 AT4G20430.1 33.377 764 413 26 115 812 119 852 6.95e-101 332
Msa1458320 AT1G20160.3 39.423 520 262 13 66 555 12 508 2.49e-97 314
Msa1458320 AT5G44530.1 33.245 758 408 24 115 806 106 831 3.06e-97 322
Msa1458320 AT4G20430.2 33.333 756 400 26 115 812 119 828 3.80e-97 321
Msa1458320 AT2G39850.1 32.097 782 425 32 86 806 27 763 1.03e-95 316
Msa1458320 AT1G30600.1 32.148 759 428 25 115 812 98 830 2.30e-92 308
Msa1458320 AT5G44530.2 32.184 783 408 25 115 806 106 856 2.86e-92 309
Msa1458320 AT1G62340.1 32.065 736 427 19 82 758 62 783 2.22e-86 292
Msa1458320 AT5G58840.2 35.409 514 259 13 61 555 1 460 1.21e-81 270
Msa1458320 AT5G44530.3 32.353 510 278 15 115 572 106 600 1.22e-58 211
Msa1458320 AT1G32980.1 40.741 189 108 3 590 777 3 188 2.56e-38 141
Msa1458320 AT5G59110.1 39.634 164 90 6 650 808 7 166 3.82e-26 106

Find 230 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCGCTCCCCAGAGTTTC+TGG 0.120668 tig0039520:-21254 Msa1458320:CDS
TCATGAAAACTTTGCGATTC+TGG 0.163852 tig0039520:+21145 None:intergenic
TTGTCCACGCCATGGGCTTA+TGG 0.184304 tig0039520:-19687 Msa1458320:CDS
CGTAGTTCTGATTCAGTTCT+AGG 0.212113 tig0039520:-21310 Msa1458320:CDS
ATTGCACTTGGACTCCATTC+TGG 0.221958 tig0039520:+19786 None:intergenic
TCTTGTTCGGCGGGGAATAC+TGG 0.237638 tig0039520:-20638 Msa1458320:CDS
GATTCGGTTACGTCTGAATT+TGG 0.251704 tig0039520:-19267 Msa1458320:CDS
CAGCAGCGGTGGTGGCAGTA+TGG 0.254435 tig0039520:+20924 None:intergenic
ATTCTGAAGCCTGATGTTAT+TGG 0.261578 tig0039520:-20065 Msa1458320:CDS
GACCGGCGCTGTTGGGCCTT+CGG 0.291436 tig0039520:-20015 Msa1458320:CDS
TGTCCACGCCATGGGCTTAT+GGG 0.322451 tig0039520:-19686 Msa1458320:CDS
TACCAGACATGATATTGAAT+TGG 0.324634 tig0039520:+19970 None:intergenic
TAGGGCTAGGCTACTGCTAT+TGG 0.325456 tig0039520:+19143 None:intergenic
ATTGTCCATGTAAAAGCAAT+TGG 0.328392 tig0039520:+19204 None:intergenic
TGGACAATTCTATGAAGATT+TGG 0.329159 tig0039520:-19189 Msa1458320:exon
TTCTGAAGCCTGATGTTATT+GGG 0.334006 tig0039520:-20064 Msa1458320:CDS
ACCGGCGCTGTTGGGCCTTC+GGG 0.334396 tig0039520:-20014 Msa1458320:CDS
TCTCTGTCACGAGGTGAAAT+AGG 0.335194 tig0039520:+20959 None:intergenic
CAAAGATATTGTTGATGATT+CGG 0.338233 tig0039520:-19283 Msa1458320:CDS
CTCTCCCATTGCATCCCTTA+AGG 0.338316 tig0039520:+19713 None:intergenic
CGGTGCTCGAAGCTTCTCTA+AGG 0.347369 tig0039520:-21032 Msa1458320:CDS
GTAGCTAACGCCACTCTTCT+TGG 0.348716 tig0039520:-20893 Msa1458320:CDS
CCTTCATACGACGTAGTTAT+CGG 0.352820 tig0039520:-21190 Msa1458320:CDS
ACTTGTTCTACCTATTTGTC+TGG 0.376027 tig0039520:-19525 Msa1458320:CDS
ATTTGTGGCGTCACACCATT+GGG 0.378777 tig0039520:+20086 None:intergenic
GCAACAAACAACACCAAGTT+AGG 0.379170 tig0039520:-19230 Msa1458320:CDS
AGCCATACCACGTGCTGTTC+CGG 0.380550 tig0039520:+20862 None:intergenic
GGGAAACGAACCGGTTGGTT+TGG 0.384425 tig0039520:-20471 Msa1458320:CDS
GAAGAAGAAGATTGGAGAAT+GGG 0.387190 tig0039520:+21412 None:intergenic
TGGTGAAAGGCAAACATATA+TGG 0.391086 tig0039520:-19322 Msa1458320:CDS
GAGAATCAGAAGAAGAAGAT+TGG 0.391706 tig0039520:+21404 None:intergenic
GAAAGAAAGCAGCAGCTGTT+TGG 0.395226 tig0039520:-19091 Msa1458320:three_prime_UTR
AGGGATATTGGTTTCTTGTT+CGG 0.398568 tig0039520:-20651 Msa1458320:CDS
GGCGGTGGAGAGAGGGATAT+TGG 0.399219 tig0039520:-20663 Msa1458320:CDS
TTACATGGTACCGGCCGTTT+CGG 0.400307 tig0039520:-20243 Msa1458320:CDS
GTGTACTTGACACTGGAGTA+TGG 0.406869 tig0039520:-21168 Msa1458320:CDS
AGCGGACACTTACTAACGTT+GGG 0.409089 tig0039520:-19434 Msa1458320:CDS
CCAACGGCTGTGCTTAGTTT+CGG 0.409141 tig0039520:-20167 Msa1458320:CDS
GCGGGATGGACCGGCGCTGT+TGG 0.410208 tig0039520:-20023 Msa1458320:CDS
TAGGTAGAACAAGTAACATT+AGG 0.416299 tig0039520:+19534 None:intergenic
CAACACAGAGTCTCCCTTAA+GGG 0.417194 tig0039520:-19727 Msa1458320:CDS
TTGGAGAATGGGAGAGTACA+TGG 0.420480 tig0039520:+21423 None:intergenic
CATACTGCCACCACCGCTGC+TGG 0.421386 tig0039520:-20923 Msa1458320:CDS
TCTCCCATTGCATCCCTTAA+GGG 0.426619 tig0039520:+19714 None:intergenic
CGCCATCGAGATGGGATTTG+AGG 0.427411 tig0039520:+21112 None:intergenic
GACCGTCGGAGCAGGGACTT+TGG 0.431677 tig0039520:-20573 Msa1458320:CDS
AATTTGTGGCGTCACACCAT+TGG 0.431759 tig0039520:+20085 None:intergenic
TGAAGCAGACCCAGAAACTC+TGG 0.433090 tig0039520:+21244 None:intergenic
GGCGGAGCCAGCAGCGGTGG+TGG 0.433974 tig0039520:+20916 None:intergenic
ACCAGACATGATATTGAATT+GGG 0.436531 tig0039520:+19971 None:intergenic
ATCACCAGGGCCAGACAAAT+AGG 0.437197 tig0039520:+19515 None:intergenic
AGGGCTAGGCTACTGCTATT+GGG 0.439811 tig0039520:+19144 None:intergenic
ACGCCATGGGCTTATGGGTC+AGG 0.441455 tig0039520:-19681 Msa1458320:CDS
ACCCGCTCCCCAGAGTTTCT+GGG 0.441917 tig0039520:-21253 Msa1458320:CDS
TCTACCTATTTGTCTGGCCC+TGG 0.446108 tig0039520:-19519 Msa1458320:CDS
AGAAGAAGAAGATTGGAGAA+TGG 0.447698 tig0039520:+21411 None:intergenic
TTAAAATAAACCAAACCAAC+CGG 0.448597 tig0039520:+20461 None:intergenic
CATGGTACCGGCCGTTTCGG+TGG 0.448613 tig0039520:-20240 Msa1458320:CDS
CAGAGTGAAGAATCGAAATC+TGG 0.448619 tig0039520:+21070 None:intergenic
AAGCAATTGGGCTCCTAACT+TGG 0.449411 tig0039520:+19217 None:intergenic
GATTGCCGAGTCAAGTGAAC+CGG 0.453450 tig0039520:+20403 None:intergenic
GCCCAATTCAATATCATGTC+TGG 0.454733 tig0039520:-19972 Msa1458320:intron
GGGTATCTCATGGCATCTCC+TGG 0.456433 tig0039520:-21010 Msa1458320:CDS
TATTTCGACACCATCGCAAT+CGG 0.458637 tig0039520:-20695 Msa1458320:CDS
ACAACACAGAGTCTCCCTTA+AGG 0.459169 tig0039520:-19728 Msa1458320:CDS
GTGATTGACGCTGGAGGTGT+TGG 0.460349 tig0039520:-20317 Msa1458320:CDS
TGGATCATGACCGTCGGAGC+AGG 0.465301 tig0039520:-20581 Msa1458320:CDS
ACATCAGGCTTCAGAATTTG+TGG 0.467262 tig0039520:+20071 None:intergenic
ACTCTTCTTGGTTACGCTAC+CGG 0.467899 tig0039520:-20881 Msa1458320:CDS
GTTTATGATGTAGTTGTTAG+TGG 0.469150 tig0039520:-19399 Msa1458320:CDS
AAGCCTGATGTTATTGGGCC+TGG 0.469767 tig0039520:-20059 Msa1458320:CDS
ACTTTACAGTGGAGAAGGAA+TGG 0.472274 tig0039520:-20492 Msa1458320:CDS
AGAGGCCTTGTCCACGCCAT+GGG 0.478438 tig0039520:-19694 Msa1458320:CDS
ACCCAGAAACTCTGGGGAGC+GGG 0.478882 tig0039520:+21252 None:intergenic
ATAAACAAGGCCAGGAGATA+AGG 0.479504 tig0039520:+19638 None:intergenic
AGCAGCGGTGGTGGCAGTAT+GGG 0.480916 tig0039520:+20925 None:intergenic
AGAGCTGATTTGATTGCACT+TGG 0.485556 tig0039520:+19774 None:intergenic
CGGAGCAGGGACTTTGGATC+GGG 0.487286 tig0039520:-20567 Msa1458320:CDS
CTTTACAGTGGAGAAGGAAT+GGG 0.487413 tig0039520:-20491 Msa1458320:CDS
GGCACGTATCGCTGTTTACA+AGG 0.489529 tig0039520:-20834 Msa1458320:CDS
AAACAAATTAAGAAAGCCTA+TGG 0.493389 tig0039520:-21560 Msa1458320:CDS
AACACGGCGGCGAGCGGTGA+AGG 0.493506 tig0039520:-20281 Msa1458320:CDS
AACATCTTAGCGGGATGGAC+CGG 0.494597 tig0039520:-20032 Msa1458320:CDS
GTCTCCCTTAAGGGATGCAA+TGG 0.498480 tig0039520:-19718 Msa1458320:CDS
CACTTTCCACGCCATCGAGA+TGG 0.500509 tig0039520:+21103 None:intergenic
AAATCAACTACAATAGGGCT+AGG 0.504370 tig0039520:+19130 None:intergenic
ATGGCATCTCCTGGTGGTGG+TGG 0.505205 tig0039520:-21001 Msa1458320:CDS
GAGAGGCCTTGTCCACGCCA+TGG 0.507862 tig0039520:-19695 Msa1458320:CDS
GCAGCAGCTGTTTGGAGCTG+TGG 0.509203 tig0039520:-19083 Msa1458320:three_prime_UTR
CCGATAACTACGTCGTATGA+AGG 0.509460 tig0039520:+21190 None:intergenic
TTGTCCATGTAAAAGCAATT+GGG 0.510251 tig0039520:+19205 None:intergenic
TGCATTCTGATGTTATTGCT+TGG 0.511280 tig0039520:-21591 Msa1458320:CDS
CCTCAAAAGGCCTTATCTCC+TGG 0.511355 tig0039520:-19648 Msa1458320:CDS
TACGGCGGAGCCAGCAGCGG+TGG 0.512373 tig0039520:+20913 None:intergenic
AGGTCATGTCAACCCTCAAA+AGG 0.512794 tig0039520:-19661 Msa1458320:CDS
TACCGGAACAGCACGTGGTA+TGG 0.512993 tig0039520:-20864 Msa1458320:CDS
ATGTCATGTCCGCACATAAG+TGG 0.515272 tig0039520:-19837 Msa1458320:CDS
TTCAGCTCTCGTGGCCCCAA+TGG 0.516803 tig0039520:-20101 Msa1458320:CDS
ATGTTATGTCATAGACTGCT+AGG 0.518347 tig0039520:+18966 None:intergenic
CCCGCTAAGATGTTCACGCC+AGG 0.518631 tig0039520:+20041 None:intergenic
TGATTGACGCTGGAGGTGTT+GGG 0.520092 tig0039520:-20316 Msa1458320:CDS
AAGATACAAAGTTGAGGTTG+AGG 0.522887 tig0039520:+21534 None:intergenic
GCCCGAAGGCCCAACAGCGC+CGG 0.523502 tig0039520:+20013 None:intergenic
ACCTACACTCACTCTTACAA+CGG 0.523770 tig0039520:-21373 Msa1458320:CDS
TCGCTGTTTACAAGGTCTGC+TGG 0.524156 tig0039520:-20826 Msa1458320:CDS
AGAAGGAATGGGAAACGAAC+CGG 0.526234 tig0039520:-20480 Msa1458320:CDS
TTTATGATGTAGTTGTTAGT+GGG 0.526742 tig0039520:-19398 Msa1458320:CDS
GCGATGGTGTCGAAATAGTA+AGG 0.529219 tig0039520:+20701 None:intergenic
GTAAACTCACGTGTGGAGAA+AGG 0.531274 tig0039520:-20347 Msa1458320:CDS
ACTTTCCACGCCATCGAGAT+GGG 0.533299 tig0039520:+21104 None:intergenic
ATAAGCCCATGGCGTGGACA+AGG 0.534719 tig0039520:+19689 None:intergenic
AAACATACTCTAATCGTACT+TGG 0.535717 tig0039520:+18932 None:intergenic
TCAGCATCATAAACAAGGCC+AGG 0.537214 tig0039520:+19630 None:intergenic
ATTATTATCTGCTACAGTAA+TGG 0.537590 tig0039520:-21500 Msa1458320:CDS
CTCATGGCATCTCCTGGTGG+TGG 0.537670 tig0039520:-21004 Msa1458320:CDS
AGCACGTGGTATGGCTCCAC+AGG 0.539879 tig0039520:-20855 Msa1458320:CDS
ACGCCAGGCCCAATAACATC+AGG 0.542572 tig0039520:+20056 None:intergenic
GGCTGATAGTTACATGGTAC+CGG 0.542763 tig0039520:-20252 Msa1458320:CDS
ACAGTTATCCCCACCGTGGA+TGG 0.543147 tig0039520:+19375 None:intergenic
ATATTGGTTTCTTGTTCGGC+GGG 0.545016 tig0039520:-20647 Msa1458320:CDS
GTTTCACTTTACAGTGGAGA+AGG 0.545197 tig0039520:-20497 Msa1458320:CDS
GTTAGTGGGCCATCCACGGT+GGG 0.545428 tig0039520:-19384 Msa1458320:CDS
TTTCCGGCTTACGCTACTCT+CGG 0.546885 tig0039520:-20542 Msa1458320:CDS
AACTGTGAATCCTACCAAGC+TGG 0.547180 tig0039520:-19358 Msa1458320:CDS
AGCTACGGCGGAGCCAGCAG+CGG 0.550452 tig0039520:+20910 None:intergenic
ATGGTACCGGCCGTTTCGGT+GGG 0.550677 tig0039520:-20239 Msa1458320:CDS
ATCTATTCCTGCGAGTATGT+CGG 0.550739 tig0039520:+20784 None:intergenic
GGCGGCGAGCGGTGAAGGAG+TGG 0.552082 tig0039520:-20276 Msa1458320:CDS
GACCCAGAAACTCTGGGGAG+CGG 0.552321 tig0039520:+21251 None:intergenic
CCTGGCGTGAACATCTTAGC+GGG 0.554247 tig0039520:-20041 Msa1458320:CDS
GAAGCAGACCCAGAAACTCT+GGG 0.555259 tig0039520:+21245 None:intergenic
TTGGTGAAGAAACTGAGAAT+GGG 0.555837 tig0039520:+21213 None:intergenic
GTTGGTGAAGAAACTGAGAA+TGG 0.559666 tig0039520:+21212 None:intergenic
TCGGAGCAGGGACTTTGGAT+CGG 0.560028 tig0039520:-20568 Msa1458320:CDS
TGAAAGCGGCTCATCCAGAA+TGG 0.560236 tig0039520:-19800 Msa1458320:CDS
TCGAGTAGTATATGTATGCC+CGG 0.561085 tig0039520:-20422 Msa1458320:CDS
TGGGATGATTCTTGCAAACA+CGG 0.561178 tig0039520:-20297 Msa1458320:CDS
TACAAGGTCTGCTGGACCGA+CGG 0.562470 tig0039520:-20818 Msa1458320:CDS
AAGAAGAGTGGCGTTAGCTA+CGG 0.562897 tig0039520:+20895 None:intergenic
TTCGCCTCCGACATACTCGC+AGG 0.566678 tig0039520:-20791 Msa1458320:CDS
TTTCCGAGAGTAGCGTAAGC+CGG 0.567121 tig0039520:+20539 None:intergenic
TATCTCATGGCATCTCCTGG+TGG 0.568109 tig0039520:-21007 Msa1458320:CDS
CTGAATTTGGCAGTATTACG+TGG 0.571708 tig0039520:-19254 Msa1458320:CDS
GGTGCTCGAAGCTTCTCTAA+GGG 0.571839 tig0039520:-21031 Msa1458320:CDS
GATATTGGTTTCTTGTTCGG+CGG 0.572540 tig0039520:-20648 Msa1458320:CDS
GTTGAGGTTGAGGATGCCAT+AGG 0.575113 tig0039520:+21544 None:intergenic
AAAGATGCTACCACGGGTGA+AGG 0.575323 tig0039520:+20122 None:intergenic
CAGCAGCTGTTTGGAGCTGT+GGG 0.575642 tig0039520:-19082 Msa1458320:three_prime_UTR
TAACTACGTCGTATGAAGGT+TGG 0.577564 tig0039520:+21194 None:intergenic
CGTGGCCGCGTTGTTGAAAG+CGG 0.578930 tig0039520:-19814 Msa1458320:CDS
TTCTTTCTACCACCACCACC+AGG 0.579198 tig0039520:+20992 None:intergenic
GCCTGGCGTGAACATCTTAG+CGG 0.579895 tig0039520:-20042 Msa1458320:CDS
GATGGGTAATTAAGATCACC+AGG 0.581944 tig0039520:+19501 None:intergenic
CTTCTCTAAGGGGTATCTCA+TGG 0.582430 tig0039520:-21020 Msa1458320:CDS
ACGGCTGTGCTTAGTTTCGG+TGG 0.584449 tig0039520:-20164 Msa1458320:CDS
CAAATCCCATCTCGATGGCG+TGG 0.585048 tig0039520:-21109 Msa1458320:CDS
GGCACGGTTGTGATTGACGC+TGG 0.585266 tig0039520:-20326 Msa1458320:CDS
CGCAAAAGCTCCGATTGCGA+TGG 0.585467 tig0039520:+20685 None:intergenic
ATCCAAAGTCCCTGCTCCGA+CGG 0.586633 tig0039520:+20571 None:intergenic
TCTCCCTTAAGGGATGCAAT+GGG 0.587215 tig0039520:-19717 Msa1458320:CDS
TTGCACTTGTTGAGTGTCAA+GGG 0.587760 tig0039520:+21339 None:intergenic
GGATCATGACCGTCGGAGCA+GGG 0.589828 tig0039520:-20580 Msa1458320:CDS
CAGTGTCAGCATCATAAACA+AGG 0.590216 tig0039520:+19625 None:intergenic
CTTGACTCGGCAATCGTGCG+CGG 0.590936 tig0039520:-20395 Msa1458320:CDS
AAAGTGGTTGTATGTGATAG+AGG 0.591716 tig0039520:-20371 Msa1458320:CDS
CTTGCACTTGTTGAGTGTCA+AGG 0.593239 tig0039520:+21338 None:intergenic
GATGTGTTGTCACTCTCACT+CGG 0.593420 tig0039520:-20740 Msa1458320:CDS
ATTTCACCTCGTGACAGAGA+TGG 0.593977 tig0039520:-20956 Msa1458320:CDS
AGTTGTTAGTGGGCCATCCA+CGG 0.595088 tig0039520:-19388 Msa1458320:CDS
GCTTACGCTACTCTCGGAAA+CGG 0.597426 tig0039520:-20536 Msa1458320:CDS
GGAAACGGAAAACGTTTCGC+CGG 0.599631 tig0039520:-20521 Msa1458320:CDS
GTGGGATGTTGATGTTGCAA+AGG 0.599665 tig0039520:-19064 Msa1458320:three_prime_UTR
CTTAAGGGATGCAATGGGAG+AGG 0.600444 tig0039520:-19712 Msa1458320:CDS
AGCGTTGGATTCTAATCCAA+CGG 0.600590 tig0039520:-20183 Msa1458320:CDS
GGCGAGCGGTGAAGGAGTGG+TGG 0.600946 tig0039520:-20273 Msa1458320:CDS
ATTGCCGAGTCAAGTGAACC+GGG 0.601407 tig0039520:+20404 None:intergenic
CTTGCAAACACGGCGGCGAG+CGG 0.601628 tig0039520:-20287 Msa1458320:CDS
GCGTGAACATCTTAGCGGGA+TGG 0.607911 tig0039520:-20037 Msa1458320:CDS
AAGCGGACACTTACTAACGT+TGG 0.609439 tig0039520:-19435 Msa1458320:CDS
TACAAGAAGATACAAAGTTG+AGG 0.609951 tig0039520:+21528 None:intergenic
ATGTCCGCACATAAGTGGCG+TGG 0.612254 tig0039520:-19832 Msa1458320:CDS
GCTCCGACGGTCATGATCCA+CGG 0.612687 tig0039520:+20584 None:intergenic
TGGGATGTTGATGTTGCAAA+GGG 0.615816 tig0039520:-19063 Msa1458320:three_prime_UTR
GTTATCGGTGTACTTGACAC+TGG 0.621282 tig0039520:-21175 Msa1458320:CDS
TATGCCCGGTTCACTTGACT+CGG 0.625542 tig0039520:-20408 Msa1458320:CDS
TGCCTCAAATCCCATCTCGA+TGG 0.627913 tig0039520:-21114 Msa1458320:CDS
GTAGCATCTTTCAGCTCTCG+TGG 0.630684 tig0039520:-20110 Msa1458320:CDS
TGTTAGTGGGCCATCCACGG+TGG 0.633368 tig0039520:-19385 Msa1458320:CDS
CCGAAACTAAGCACAGCCGT+TGG 0.639798 tig0039520:+20167 None:intergenic
GTGGTGTTGTTCAATACAAG+CGG 0.645961 tig0039520:-19452 Msa1458320:CDS
TAAACAGCGATACGTGCCTG+TGG 0.645964 tig0039520:+20839 None:intergenic
TGACCTGACCCATAAGCCCA+TGG 0.650261 tig0039520:+19678 None:intergenic
TTAGTGGGCCATCCACGGTG+GGG 0.650964 tig0039520:-19383 Msa1458320:CDS
TCCACTGTAAAGTGAAACGC+CGG 0.651251 tig0039520:+20502 None:intergenic
AAATGTAAATGCAATTCGTG+AGG 0.653711 tig0039520:+21693 None:intergenic
AGTGGTGGCTGATAGTTACA+TGG 0.656319 tig0039520:-20258 Msa1458320:CDS
GTGCTCGAAGCTTCTCTAAG+GGG 0.657498 tig0039520:-21030 Msa1458320:CDS
CCGTGTCCATCTCTGTCACG+AGG 0.657961 tig0039520:+20950 None:intergenic
GGTGTCGAAATAGTAAGGAG+TGG 0.658621 tig0039520:+20706 None:intergenic
GAGCTGAAAGATGCTACCAC+GGG 0.660749 tig0039520:+20116 None:intergenic
TATTGGTTTCTTGTTCGGCG+GGG 0.662234 tig0039520:-20646 Msa1458320:CDS
AGAGCTGAAAGATGCTACCA+CGG 0.662264 tig0039520:+20115 None:intergenic
GCCGGCGTTTCACTTTACAG+TGG 0.663644 tig0039520:-20503 Msa1458320:CDS
TTCGATAACGAACCGCTGCG+AGG 0.664252 tig0039520:+20614 None:intergenic
GCGGCCACGCCACTTATGTG+CGG 0.665110 tig0039520:+19828 None:intergenic
CGTTATCGAATGTAGCTCCG+TGG 0.668641 tig0039520:-20601 Msa1458320:CDS
TGACCCATAAGCCCATGGCG+TGG 0.671307 tig0039520:+19683 None:intergenic
TAGAGGTGTAAACTCACGTG+TGG 0.673521 tig0039520:-20354 Msa1458320:CDS
GGAATGGGAAACGAACCGGT+TGG 0.676396 tig0039520:-20476 Msa1458320:CDS
GGGAATACTGGACCTCGCAG+CGG 0.677204 tig0039520:-20626 Msa1458320:CDS
GCTCCGTGGATCATGACCGT+CGG 0.679466 tig0039520:-20587 Msa1458320:CDS
GCTTGACAATGAGTTTCACA+TGG 0.684717 tig0039520:+19559 None:intergenic
ATAGATCAAGCGATTCAAGA+CGG 0.687911 tig0039520:-20767 Msa1458320:CDS
CGAGTGTCTAGTGAGCCCGA+AGG 0.690644 tig0039520:+19999 None:intergenic
GGTAGCGTAACCAAGAAGAG+TGG 0.691209 tig0039520:+20883 None:intergenic
TACGCTACCGGAACAGCACG+TGG 0.695241 tig0039520:-20869 Msa1458320:CDS
GAACGTGAGACCTTCACCCG+TGG 0.697979 tig0039520:-20132 Msa1458320:CDS
CTCACGTGTGGAGAAAGGCA+CGG 0.701275 tig0039520:-20342 Msa1458320:CDS
ACGGTTGTGATTGACGCTGG+AGG 0.706420 tig0039520:-20323 Msa1458320:CDS
CCTCGTGACAGAGATGGACA+CGG 0.713970 tig0039520:-20950 Msa1458320:CDS
TATTCCTGCGAGTATGTCGG+AGG 0.715803 tig0039520:+20787 None:intergenic
ACCGTTGTAAGAGTGAGTGT+AGG 0.715846 tig0039520:+21372 None:intergenic
TTTGTGGCGTCACACCATTG+GGG 0.719539 tig0039520:+20087 None:intergenic
GTCGGAGGCGAAACAACCGT+CGG 0.727526 tig0039520:+20802 None:intergenic
GTGTTGTCACTCTCACTCGG+TGG 0.734561 tig0039520:-20737 Msa1458320:CDS
AAGCAGACCCAGAAACTCTG+GGG 0.735979 tig0039520:+21246 None:intergenic
ATGGGTAATTAAGATCACCA+GGG 0.759190 tig0039520:+19502 None:intergenic
GATGATTCTTGCAAACACGG+CGG 0.761680 tig0039520:-20294 Msa1458320:CDS
ATTCACAGTTATCCCCACCG+TGG 0.775304 tig0039520:+19371 None:intergenic
ATGAGCCGCTTTCAACAACG+CGG 0.781377 tig0039520:+19809 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGCAATTGATTAATATT+CGG + tig0039520:20763-20782 None:intergenic 15.0%
!!! TTTTTAAATCAACTACAATA+GGG + tig0039520:21531-21550 None:intergenic 15.0%
!!! TTTTTTAAATCAACTACAAT+AGG + tig0039520:21532-21551 None:intergenic 15.0%
!!! AACTATGTAAGTTTTTTTGT+TGG + tig0039520:19185-19204 None:intergenic 20.0%
! AAACAAATTAAGAAAGCCTA+TGG - tig0039520:19093-19112 Msa1458320:three_prime_UTR 25.0%
! ATTATTATCTGCTACAGTAA+TGG - tig0039520:19153-19172 Msa1458320:three_prime_UTR 25.0%
! TTAAAATAAACCAAACCAAC+CGG + tig0039520:20195-20214 None:intergenic 25.0%
!!! GTTTGGTTTATTTTAACGAA+CGG - tig0039520:20199-20218 Msa1458320:CDS 25.0%
! TAATATTCGGTCTTACATAT+AGG + tig0039520:20750-20769 None:intergenic 25.0%
! CAAAAACAACAGAAAATGAT+GGG + tig0039520:21172-21191 None:intergenic 25.0%
! TTTATGATGTAGTTGTTAGT+GGG - tig0039520:21255-21274 Msa1458320:CDS 25.0%
!!! CAAAGATATTGTTGATGATT+CGG - tig0039520:21370-21389 Msa1458320:CDS 25.0%
AAATGTAAATGCAATTCGTG+AGG + tig0039520:18963-18982 None:intergenic 30.0%
TACAAGAAGATACAAAGTTG+AGG + tig0039520:19128-19147 None:intergenic 30.0%
CTCTGTAACAAAAAACTCAT+CGG - tig0039520:19601-19620 Msa1458320:CDS 30.0%
ACCAGACATGATATTGAATT+GGG + tig0039520:20685-20704 None:intergenic 30.0%
TACCAGACATGATATTGAAT+TGG + tig0039520:20686-20705 None:intergenic 30.0%
TAGGTAGAACAAGTAACATT+AGG + tig0039520:21122-21141 None:intergenic 30.0%
CCAAAAACAACAGAAAATGA+TGG + tig0039520:21173-21192 None:intergenic 30.0%
!!! CCATCATTTTCTGTTGTTTT+TGG - tig0039520:21170-21189 Msa1458320:CDS 30.0%
!!! GTTGTTTTTGGAAACAATAG+TGG - tig0039520:21182-21201 Msa1458320:CDS 30.0%
GTTTATGATGTAGTTGTTAG+TGG - tig0039520:21254-21273 Msa1458320:CDS 30.0%
TTGTCCATGTAAAAGCAATT+GGG + tig0039520:21451-21470 None:intergenic 30.0%
ATTGTCCATGTAAAAGCAAT+TGG + tig0039520:21452-21471 None:intergenic 30.0%
TGGACAATTCTATGAAGATT+TGG - tig0039520:21464-21483 Msa1458320:CDS 30.0%
AAACATACTCTAATCGTACT+TGG + tig0039520:21724-21743 None:intergenic 30.0%
TGCATTCTGATGTTATTGCT+TGG - tig0039520:19062-19081 Msa1458320:three_prime_UTR 35.0%
AAGATACAAAGTTGAGGTTG+AGG + tig0039520:19122-19141 None:intergenic 35.0%
GAAGAAGAAGATTGGAGAAT+GGG + tig0039520:19244-19263 None:intergenic 35.0%
AGAAGAAGAAGATTGGAGAA+TGG + tig0039520:19245-19264 None:intergenic 35.0%
GAGAATCAGAAGAAGAAGAT+TGG + tig0039520:19252-19271 None:intergenic 35.0%
TTGGTGAAGAAACTGAGAAT+GGG + tig0039520:19443-19462 None:intergenic 35.0%
TCATGAAAACTTTGCGATTC+TGG + tig0039520:19511-19530 None:intergenic 35.0%
ATAGATCAAGCGATTCAAGA+CGG - tig0039520:19886-19905 Msa1458320:intron 35.0%
!! AGGGATATTGGTTTCTTGTT+CGG - tig0039520:20002-20021 Msa1458320:CDS 35.0%
AAAGTGGTTGTATGTGATAG+AGG - tig0039520:20282-20301 Msa1458320:CDS 35.0%
! GATTAAAAAGTATGCAGCGT+TGG - tig0039520:20455-20474 Msa1458320:CDS 35.0%
!! ATTCTGAAGCCTGATGTTAT+TGG - tig0039520:20588-20607 Msa1458320:CDS 35.0%
!! TTCTGAAGCCTGATGTTATT+GGG - tig0039520:20589-20608 Msa1458320:CDS 35.0%
ACTTGTTCTACCTATTTGTC+TGG - tig0039520:21128-21147 Msa1458320:CDS 35.0%
ATGGGTAATTAAGATCACCA+GGG + tig0039520:21154-21173 None:intergenic 35.0%
!!! TTTTTGAGCAAGTTGGTGAA+AGG - tig0039520:21318-21337 Msa1458320:CDS 35.0%
TGGTGAAAGGCAAACATATA+TGG - tig0039520:21331-21350 Msa1458320:CDS 35.0%
AAATCAACTACAATAGGGCT+AGG + tig0039520:21526-21545 None:intergenic 35.0%
ATGTTATGTCATAGACTGCT+AGG + tig0039520:21690-21709 None:intergenic 35.0%
ACCTACACTCACTCTTACAA+CGG - tig0039520:19280-19299 Msa1458320:CDS 40.0%
! TTGCACTTGTTGAGTGTCAA+GGG + tig0039520:19317-19336 None:intergenic 40.0%
!! CGTAGTTCTGATTCAGTTCT+AGG - tig0039520:19343-19362 Msa1458320:CDS 40.0%
! GTTGGTGAAGAAACTGAGAA+TGG + tig0039520:19444-19463 None:intergenic 40.0%
TAACTACGTCGTATGAAGGT+TGG + tig0039520:19462-19481 None:intergenic 40.0%
CCTTCATACGACGTAGTTAT+CGG - tig0039520:19463-19482 Msa1458320:CDS 40.0%
CAGAGTGAAGAATCGAAATC+TGG + tig0039520:19586-19605 None:intergenic 40.0%
ATCTATTCCTGCGAGTATGT+CGG + tig0039520:19872-19891 None:intergenic 40.0%
TATTTCGACACCATCGCAAT+CGG - tig0039520:19958-19977 Msa1458320:intron 40.0%
!! GATATTGGTTTCTTGTTCGG+CGG - tig0039520:20005-20024 Msa1458320:CDS 40.0%
!! ATATTGGTTTCTTGTTCGGC+GGG - tig0039520:20006-20025 Msa1458320:CDS 40.0%
GTTTCACTTTACAGTGGAGA+AGG - tig0039520:20156-20175 Msa1458320:CDS 40.0%
ACTTTACAGTGGAGAAGGAA+TGG - tig0039520:20161-20180 Msa1458320:CDS 40.0%
CTTTACAGTGGAGAAGGAAT+GGG - tig0039520:20162-20181 Msa1458320:CDS 40.0%
TCGAGTAGTATATGTATGCC+CGG - tig0039520:20231-20250 Msa1458320:CDS 40.0%
TGGGATGATTCTTGCAAACA+CGG - tig0039520:20356-20375 Msa1458320:CDS 40.0%
! AGCGTTGGATTCTAATCCAA+CGG - tig0039520:20470-20489 Msa1458320:CDS 40.0%
ACATCAGGCTTCAGAATTTG+TGG + tig0039520:20585-20604 None:intergenic 40.0%
GCCCAATTCAATATCATGTC+TGG - tig0039520:20681-20700 Msa1458320:CDS 40.0%
!! GTTACTGCGTTGATAACGTT+AGG - tig0039520:20786-20805 Msa1458320:CDS 40.0%
!! AGAGCTGATTTGATTGCACT+TGG + tig0039520:20882-20901 None:intergenic 40.0%
ATAAACAAGGCCAGGAGATA+AGG + tig0039520:21018-21037 None:intergenic 40.0%
CAGTGTCAGCATCATAAACA+AGG + tig0039520:21031-21050 None:intergenic 40.0%
GCTTGACAATGAGTTTCACA+TGG + tig0039520:21097-21116 None:intergenic 40.0%
GATGGGTAATTAAGATCACC+AGG + tig0039520:21155-21174 None:intergenic 40.0%
!! GTGGTGTTGTTCAATACAAG+CGG - tig0039520:21201-21220 Msa1458320:CDS 40.0%
! AACTTGCTCAAAAACCAGCT+TGG + tig0039520:21312-21331 None:intergenic 40.0%
!!! AAGCTGGTTTTTGAGCAAGT+TGG - tig0039520:21311-21330 Msa1458320:CDS 40.0%
! GATTCGGTTACGTCTGAATT+TGG - tig0039520:21386-21405 Msa1458320:CDS 40.0%
CTGAATTTGGCAGTATTACG+TGG - tig0039520:21399-21418 Msa1458320:CDS 40.0%
GCAACAAACAACACCAAGTT+AGG - tig0039520:21423-21442 Msa1458320:CDS 40.0%
TGGGATGTTGATGTTGCAAA+GGG - tig0039520:21590-21609 Msa1458320:CDS 40.0%
! TTGGAGAATGGGAGAGTACA+TGG + tig0039520:19233-19252 None:intergenic 45.0%
ACCGTTGTAAGAGTGAGTGT+AGG + tig0039520:19284-19303 None:intergenic 45.0%
! CTTGCACTTGTTGAGTGTCA+AGG + tig0039520:19318-19337 None:intergenic 45.0%
CCGATAACTACGTCGTATGA+AGG + tig0039520:19466-19485 None:intergenic 45.0%
GTTATCGGTGTACTTGACAC+TGG - tig0039520:19478-19497 Msa1458320:CDS 45.0%
GTGTACTTGACACTGGAGTA+TGG - tig0039520:19485-19504 Msa1458320:CDS 45.0%
!! CTTCTCTAAGGGGTATCTCA+TGG - tig0039520:19633-19652 Msa1458320:CDS 45.0%
TCTCTGTCACGAGGTGAAAT+AGG + tig0039520:19697-19716 None:intergenic 45.0%
ATTTCACCTCGTGACAGAGA+TGG - tig0039520:19697-19716 Msa1458320:CDS 45.0%
AAGAAGAGTGGCGTTAGCTA+CGG + tig0039520:19761-19780 None:intergenic 45.0%
ACTCTTCTTGGTTACGCTAC+CGG - tig0039520:19772-19791 Msa1458320:CDS 45.0%
GATGTGTTGTCACTCTCACT+CGG - tig0039520:19913-19932 Msa1458320:intron 45.0%
! GGTGTCGAAATAGTAAGGAG+TGG + tig0039520:19950-19969 None:intergenic 45.0%
! GCGATGGTGTCGAAATAGTA+AGG + tig0039520:19955-19974 None:intergenic 45.0%
!! TATTGGTTTCTTGTTCGGCG+GGG - tig0039520:20007-20026 Msa1458320:CDS 45.0%
! GACTTTGGATCGGGATTTTC+CGG - tig0039520:20095-20114 Msa1458320:CDS 45.0%
TCCACTGTAAAGTGAAACGC+CGG + tig0039520:20154-20173 None:intergenic 45.0%
AGAAGGAATGGGAAACGAAC+CGG - tig0039520:20173-20192 Msa1458320:CDS 45.0%
! TAGAGGTGTAAACTCACGTG+TGG - tig0039520:20299-20318 Msa1458320:CDS 45.0%
GTAAACTCACGTGTGGAGAA+AGG - tig0039520:20306-20325 Msa1458320:CDS 45.0%
GATGATTCTTGCAAACACGG+CGG - tig0039520:20359-20378 Msa1458320:CDS 45.0%
AGTGGTGGCTGATAGTTACA+TGG - tig0039520:20395-20414 Msa1458320:CDS 45.0%
GGCTGATAGTTACATGGTAC+CGG - tig0039520:20401-20420 Msa1458320:CDS 45.0%
!!! CTCGTTTTTTCCCACCGAAA+CGG + tig0039520:20427-20446 None:intergenic 45.0%
GTTTCGGTGGGAAAAAACGA+GGG - tig0039520:20426-20445 Msa1458320:CDS 45.0%
AGAGCTGAAAGATGCTACCA+CGG + tig0039520:20541-20560 None:intergenic 45.0%
ATTTGTGGCGTCACACCATT+GGG + tig0039520:20570-20589 None:intergenic 45.0%
AATTTGTGGCGTCACACCAT+TGG + tig0039520:20571-20590 None:intergenic 45.0%
ATGTCATGTCCGCACATAAG+TGG - tig0039520:20816-20835 Msa1458320:CDS 45.0%
ATTGCACTTGGACTCCATTC+TGG + tig0039520:20870-20889 None:intergenic 45.0%
ACAACACAGAGTCTCCCTTA+AGG - tig0039520:20925-20944 Msa1458320:CDS 45.0%
CAACACAGAGTCTCCCTTAA+GGG - tig0039520:20926-20945 Msa1458320:CDS 45.0%
TCTCCCTTAAGGGATGCAAT+GGG - tig0039520:20936-20955 Msa1458320:CDS 45.0%
TCTCCCATTGCATCCCTTAA+GGG + tig0039520:20942-20961 None:intergenic 45.0%
AGGTCATGTCAACCCTCAAA+AGG - tig0039520:20992-21011 Msa1458320:CDS 45.0%
! CAGGAGATAAGGCCTTTTGA+GGG + tig0039520:21007-21026 None:intergenic 45.0%
TCAGCATCATAAACAAGGCC+AGG + tig0039520:21026-21045 None:intergenic 45.0%
AAGCGGACACTTACTAACGT+TGG - tig0039520:21218-21237 Msa1458320:CDS 45.0%
AGCGGACACTTACTAACGTT+GGG - tig0039520:21219-21238 Msa1458320:CDS 45.0%
AACTGTGAATCCTACCAAGC+TGG - tig0039520:21295-21314 Msa1458320:CDS 45.0%
TGCTCAAAAACCAGCTTGGT+AGG + tig0039520:21308-21327 None:intergenic 45.0%
AAGCAATTGGGCTCCTAACT+TGG + tig0039520:21439-21458 None:intergenic 45.0%
!! GGAGCCCAATTGCTTTTACA+TGG - tig0039520:21444-21463 Msa1458320:CDS 45.0%
GAAAGAAAGCAGCAGCTGTT+TGG - tig0039520:21562-21581 Msa1458320:CDS 45.0%
GTGGGATGTTGATGTTGCAA+AGG - tig0039520:21589-21608 Msa1458320:CDS 45.0%
GTTGAGGTTGAGGATGCCAT+AGG + tig0039520:19112-19131 None:intergenic 50.0%
AAGCAGACCCAGAAACTCTG+GGG + tig0039520:19410-19429 None:intergenic 50.0%
GAAGCAGACCCAGAAACTCT+GGG + tig0039520:19411-19430 None:intergenic 50.0%
TGAAGCAGACCCAGAAACTC+TGG + tig0039520:19412-19431 None:intergenic 50.0%
TGCCTCAAATCCCATCTCGA+TGG - tig0039520:19539-19558 Msa1458320:CDS 50.0%
ACTTTCCACGCCATCGAGAT+GGG + tig0039520:19552-19571 None:intergenic 50.0%
GGTGCTCGAAGCTTCTCTAA+GGG - tig0039520:19622-19641 Msa1458320:CDS 50.0%
GTGCTCGAAGCTTCTCTAAG+GGG - tig0039520:19623-19642 Msa1458320:CDS 50.0%
TATCTCATGGCATCTCCTGG+TGG - tig0039520:19646-19665 Msa1458320:CDS 50.0%
TTCTTTCTACCACCACCACC+AGG + tig0039520:19664-19683 None:intergenic 50.0%
GTAGCTAACGCCACTCTTCT+TGG - tig0039520:19760-19779 Msa1458320:CDS 50.0%
GGTAGCGTAACCAAGAAGAG+TGG + tig0039520:19773-19792 None:intergenic 50.0%
TAAACAGCGATACGTGCCTG+TGG + tig0039520:19817-19836 None:intergenic 50.0%
GGCACGTATCGCTGTTTACA+AGG - tig0039520:19819-19838 Msa1458320:CDS 50.0%
TCGCTGTTTACAAGGTCTGC+TGG - tig0039520:19827-19846 Msa1458320:CDS 50.0%
TATTCCTGCGAGTATGTCGG+AGG + tig0039520:19869-19888 None:intergenic 50.0%
! CATCGCAATCGGAGCTTTTG+CGG - tig0039520:19969-19988 Msa1458320:intron 50.0%
CGTTATCGAATGTAGCTCCG+TGG - tig0039520:20052-20071 Msa1458320:CDS 50.0%
TTTCCGGCTTACGCTACTCT+CGG - tig0039520:20111-20130 Msa1458320:CDS 50.0%
TTTCCGAGAGTAGCGTAAGC+CGG + tig0039520:20117-20136 None:intergenic 50.0%
GCTTACGCTACTCTCGGAAA+CGG - tig0039520:20117-20136 Msa1458320:CDS 50.0%
GGAAACGGAAAACGTTTCGC+CGG - tig0039520:20132-20151 Msa1458320:CDS 50.0%
TATGCCCGGTTCACTTGACT+CGG - tig0039520:20245-20264 Msa1458320:CDS 50.0%
ATTGCCGAGTCAAGTGAACC+GGG + tig0039520:20252-20271 None:intergenic 50.0%
GATTGCCGAGTCAAGTGAAC+CGG + tig0039520:20253-20272 None:intergenic 50.0%
!! TGATTGACGCTGGAGGTGTT+GGG - tig0039520:20337-20356 Msa1458320:CDS 50.0%
!! TTACATGGTACCGGCCGTTT+CGG - tig0039520:20410-20429 Msa1458320:CDS 50.0%
!!! TTTTTTCCCACCGAAACGGC+CGG + tig0039520:20423-20442 None:intergenic 50.0%
CGTTTCGGTGGGAAAAAACG+AGG - tig0039520:20425-20444 Msa1458320:CDS 50.0%
CCAACGGCTGTGCTTAGTTT+CGG - tig0039520:20486-20505 Msa1458320:CDS 50.0%
AAAGATGCTACCACGGGTGA+AGG + tig0039520:20534-20553 None:intergenic 50.0%
GAGCTGAAAGATGCTACCAC+GGG + tig0039520:20540-20559 None:intergenic 50.0%
GTAGCATCTTTCAGCTCTCG+TGG - tig0039520:20543-20562 Msa1458320:CDS 50.0%
TTTGTGGCGTCACACCATTG+GGG + tig0039520:20569-20588 None:intergenic 50.0%
AAGCCTGATGTTATTGGGCC+TGG - tig0039520:20594-20613 Msa1458320:CDS 50.0%
AACATCTTAGCGGGATGGAC+CGG - tig0039520:20621-20640 Msa1458320:CDS 50.0%
! ATGAGCCGCTTTCAACAACG+CGG + tig0039520:20847-20866 None:intergenic 50.0%
TGAAAGCGGCTCATCCAGAA+TGG - tig0039520:20853-20872 Msa1458320:CDS 50.0%
GTCTCCCTTAAGGGATGCAA+TGG - tig0039520:20935-20954 Msa1458320:CDS 50.0%
CTCTCCCATTGCATCCCTTA+AGG + tig0039520:20943-20962 None:intergenic 50.0%
CTTAAGGGATGCAATGGGAG+AGG - tig0039520:20941-20960 Msa1458320:CDS 50.0%
! CCAGGAGATAAGGCCTTTTG+AGG + tig0039520:21008-21027 None:intergenic 50.0%
! CCTCAAAAGGCCTTATCTCC+TGG - tig0039520:21005-21024 Msa1458320:CDS 50.0%
TCTACCTATTTGTCTGGCCC+TGG - tig0039520:21134-21153 Msa1458320:CDS 50.0%
ATCACCAGGGCCAGACAAAT+AGG + tig0039520:21141-21160 None:intergenic 50.0%
GCGGACACTTACTAACGTTG+GGG - tig0039520:21220-21239 Msa1458320:CDS 50.0%
! AGTTGTTAGTGGGCCATCCA+CGG - tig0039520:21265-21284 Msa1458320:CDS 50.0%
ATTCACAGTTATCCCCACCG+TGG + tig0039520:21285-21304 None:intergenic 50.0%
AGGGCTAGGCTACTGCTATT+GGG + tig0039520:21512-21531 None:intergenic 50.0%
TAGGGCTAGGCTACTGCTAT+TGG + tig0039520:21513-21532 None:intergenic 50.0%
CGCCATCGAGATGGGATTTG+AGG + tig0039520:19544-19563 None:intergenic 55.0%
CAAATCCCATCTCGATGGCG+TGG - tig0039520:19544-19563 Msa1458320:CDS 55.0%
CACTTTCCACGCCATCGAGA+TGG + tig0039520:19553-19572 None:intergenic 55.0%
CGGTGCTCGAAGCTTCTCTA+AGG - tig0039520:19621-19640 Msa1458320:CDS 55.0%
GGGTATCTCATGGCATCTCC+TGG - tig0039520:19643-19662 Msa1458320:CDS 55.0%
CCTCGTGACAGAGATGGACA+CGG - tig0039520:19703-19722 Msa1458320:CDS 55.0%
AAGAGTGGCGTTAGCTACGG+CGG + tig0039520:19758-19777 None:intergenic 55.0%
TACCGGAACAGCACGTGGTA+TGG - tig0039520:19789-19808 Msa1458320:CDS 55.0%
! AGCCATACCACGTGCTGTTC+CGG + tig0039520:19794-19813 None:intergenic 55.0%
TACAAGGTCTGCTGGACCGA+CGG - tig0039520:19835-19854 Msa1458320:CDS 55.0%
GTGTTGTCACTCTCACTCGG+TGG - tig0039520:19916-19935 Msa1458320:intron 55.0%
CGCAAAAGCTCCGATTGCGA+TGG + tig0039520:19971-19990 None:intergenic 55.0%
TCTTGTTCGGCGGGGAATAC+TGG - tig0039520:20015-20034 Msa1458320:CDS 55.0%
TTCGATAACGAACCGCTGCG+AGG + tig0039520:20042-20061 None:intergenic 55.0%
ATCCAAAGTCCCTGCTCCGA+CGG + tig0039520:20085-20104 None:intergenic 55.0%
TCGGAGCAGGGACTTTGGAT+CGG - tig0039520:20085-20104 Msa1458320:CDS 55.0%
GCCGGCGTTTCACTTTACAG+TGG - tig0039520:20150-20169 Msa1458320:CDS 55.0%
GGAATGGGAAACGAACCGGT+TGG - tig0039520:20177-20196 Msa1458320:CDS 55.0%
! GGGAAACGAACCGGTTGGTT+TGG - tig0039520:20182-20201 Msa1458320:CDS 55.0%
CTCACGTGTGGAGAAAGGCA+CGG - tig0039520:20311-20330 Msa1458320:CDS 55.0%
ACGGTTGTGATTGACGCTGG+AGG - tig0039520:20330-20349 Msa1458320:CDS 55.0%
! GTGATTGACGCTGGAGGTGT+TGG - tig0039520:20336-20355 Msa1458320:CDS 55.0%
CCGAAACTAAGCACAGCCGT+TGG + tig0039520:20489-20508 None:intergenic 55.0%
ACGGCTGTGCTTAGTTTCGG+TGG - tig0039520:20489-20508 Msa1458320:CDS 55.0%
ACGCCAGGCCCAATAACATC+AGG + tig0039520:20600-20619 None:intergenic 55.0%
GCCTGGCGTGAACATCTTAG+CGG - tig0039520:20611-20630 Msa1458320:CDS 55.0%
CCTGGCGTGAACATCTTAGC+GGG - tig0039520:20612-20631 Msa1458320:CDS 55.0%
GCGTGAACATCTTAGCGGGA+TGG - tig0039520:20616-20635 Msa1458320:CDS 55.0%
CTTCGGGCTCACTAGACACT+CGG - tig0039520:20655-20674 Msa1458320:CDS 55.0%
ATGTCCGCACATAAGTGGCG+TGG - tig0039520:20821-20840 Msa1458320:CDS 55.0%
ATAAGCCCATGGCGTGGACA+AGG + tig0039520:20967-20986 None:intergenic 55.0%
TTGTCCACGCCATGGGCTTA+TGG - tig0039520:20966-20985 Msa1458320:CDS 55.0%
TGTCCACGCCATGGGCTTAT+GGG - tig0039520:20967-20986 Msa1458320:CDS 55.0%
TGACCTGACCCATAAGCCCA+TGG + tig0039520:20978-20997 None:intergenic 55.0%
ACAGTTATCCCCACCGTGGA+TGG + tig0039520:21281-21300 None:intergenic 55.0%
! CAGCAGCTGTTTGGAGCTGT+GGG - tig0039520:21571-21590 Msa1458320:CDS 55.0%
TACCCGCTCCCCAGAGTTTC+TGG - tig0039520:19399-19418 Msa1458320:CDS 60.0%
ACCCGCTCCCCAGAGTTTCT+GGG - tig0039520:19400-19419 Msa1458320:CDS 60.0%
! ACCCAGAAACTCTGGGGAGC+GGG + tig0039520:19404-19423 None:intergenic 60.0%
! GACCCAGAAACTCTGGGGAG+CGG + tig0039520:19405-19424 None:intergenic 60.0%
CTCATGGCATCTCCTGGTGG+TGG - tig0039520:19649-19668 Msa1458320:CDS 60.0%
!! ATGGCATCTCCTGGTGGTGG+TGG - tig0039520:19652-19671 Msa1458320:CDS 60.0%
CCGTGTCCATCTCTGTCACG+AGG + tig0039520:19706-19725 None:intergenic 60.0%
! AGCAGCGGTGGTGGCAGTAT+GGG + tig0039520:19731-19750 None:intergenic 60.0%
TACGCTACCGGAACAGCACG+TGG - tig0039520:19784-19803 Msa1458320:CDS 60.0%
AGCACGTGGTATGGCTCCAC+AGG - tig0039520:19798-19817 Msa1458320:CDS 60.0%
GTCGGAGGCGAAACAACCGT+CGG + tig0039520:19854-19873 None:intergenic 60.0%
TTCGCCTCCGACATACTCGC+AGG - tig0039520:19862-19881 Msa1458320:intron 60.0%
! CGCAATCGGAGCTTTTGCGG+CGG - tig0039520:19972-19991 Msa1458320:intron 60.0%
! AATCGGAGCTTTTGCGGCGG+TGG - tig0039520:19975-19994 Msa1458320:CDS 60.0%
! CTTTTGCGGCGGTGGAGAGA+GGG - tig0039520:19983-20002 Msa1458320:CDS 60.0%
GGCGGTGGAGAGAGGGATAT+TGG - tig0039520:19990-20009 Msa1458320:CDS 60.0%
GGGAATACTGGACCTCGCAG+CGG - tig0039520:20027-20046 Msa1458320:CDS 60.0%
GCTCCGTGGATCATGACCGT+CGG - tig0039520:20066-20085 Msa1458320:CDS 60.0%
GCTCCGACGGTCATGATCCA+CGG + tig0039520:20072-20091 None:intergenic 60.0%
TGGATCATGACCGTCGGAGC+AGG - tig0039520:20072-20091 Msa1458320:CDS 60.0%
GGATCATGACCGTCGGAGCA+GGG - tig0039520:20073-20092 Msa1458320:CDS 60.0%
CGGAGCAGGGACTTTGGATC+GGG - tig0039520:20086-20105 Msa1458320:CDS 60.0%
!! CTTGACTCGGCAATCGTGCG+CGG - tig0039520:20258-20277 Msa1458320:CDS 60.0%
!! TTGACTCGGCAATCGTGCGC+GGG - tig0039520:20259-20278 Msa1458320:CDS 60.0%
GGCACGGTTGTGATTGACGC+TGG - tig0039520:20327-20346 Msa1458320:CDS 60.0%
!! ATGGTACCGGCCGTTTCGGT+GGG - tig0039520:20414-20433 Msa1458320:CDS 60.0%
GAACGTGAGACCTTCACCCG+TGG - tig0039520:20521-20540 Msa1458320:CDS 60.0%
TTCAGCTCTCGTGGCCCCAA+TGG - tig0039520:20552-20571 Msa1458320:CDS 60.0%
CCCGCTAAGATGTTCACGCC+AGG + tig0039520:20615-20634 None:intergenic 60.0%
CGAGTGTCTAGTGAGCCCGA+AGG + tig0039520:20657-20676 None:intergenic 60.0%
CGTGGCCGCGTTGTTGAAAG+CGG - tig0039520:20839-20858 Msa1458320:CDS 60.0%
! AGAGGCCTTGTCCACGCCAT+GGG - tig0039520:20959-20978 Msa1458320:CDS 60.0%
TGACCCATAAGCCCATGGCG+TGG + tig0039520:20973-20992 None:intergenic 60.0%
ACGCCATGGGCTTATGGGTC+AGG - tig0039520:20972-20991 Msa1458320:CDS 60.0%
! TGTTAGTGGGCCATCCACGG+TGG - tig0039520:21268-21287 Msa1458320:CDS 60.0%
! GTTAGTGGGCCATCCACGGT+GGG - tig0039520:21269-21288 Msa1458320:CDS 60.0%
! TTAGTGGGCCATCCACGGTG+GGG - tig0039520:21270-21289 Msa1458320:CDS 60.0%
! GCAGCAGCTGTTTGGAGCTG+TGG - tig0039520:21570-21589 Msa1458320:CDS 60.0%
! CAGCAGCGGTGGTGGCAGTA+TGG + tig0039520:19732-19751 None:intergenic 65.0%
CATACTGCCACCACCGCTGC+TGG - tig0039520:19730-19749 Msa1458320:CDS 65.0%
! GCTTTTGCGGCGGTGGAGAG+AGG - tig0039520:19982-20001 Msa1458320:CDS 65.0%
GACCGTCGGAGCAGGGACTT+TGG - tig0039520:20080-20099 Msa1458320:CDS 65.0%
GGCAATCGTGCGCGGGAAAG+TGG - tig0039520:20266-20285 Msa1458320:CDS 65.0%
CTTGCAAACACGGCGGCGAG+CGG - tig0039520:20366-20385 Msa1458320:CDS 65.0%
!! CATGGTACCGGCCGTTTCGG+TGG - tig0039520:20413-20432 Msa1458320:CDS 65.0%
GCGGCCACGCCACTTATGTG+CGG + tig0039520:20828-20847 None:intergenic 65.0%
! GAGAGGCCTTGTCCACGCCA+TGG - tig0039520:20958-20977 Msa1458320:CDS 65.0%
AGCTACGGCGGAGCCAGCAG+CGG + tig0039520:19746-19765 None:intergenic 70.0%
AACACGGCGGCGAGCGGTGA+AGG - tig0039520:20372-20391 Msa1458320:CDS 70.0%
GGCGAGCGGTGAAGGAGTGG+TGG - tig0039520:20380-20399 Msa1458320:CDS 70.0%
CGGGATGGACCGGCGCTGTT+GGG - tig0039520:20631-20650 Msa1458320:CDS 70.0%
GACCGGCGCTGTTGGGCCTT+CGG - tig0039520:20638-20657 Msa1458320:CDS 70.0%
ACCGGCGCTGTTGGGCCTTC+GGG - tig0039520:20639-20658 Msa1458320:CDS 70.0%
TACGGCGGAGCCAGCAGCGG+TGG + tig0039520:19743-19762 None:intergenic 75.0%
GGCGGCGAGCGGTGAAGGAG+TGG - tig0039520:20377-20396 Msa1458320:CDS 75.0%
GCGGGATGGACCGGCGCTGT+TGG - tig0039520:20630-20649 Msa1458320:CDS 75.0%
GCCCGAAGGCCCAACAGCGC+CGG + tig0039520:20643-20662 None:intergenic 75.0%
! GGCGGAGCCAGCAGCGGTGG+TGG + tig0039520:19740-19759 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0039520 gene 18929 21746 18929 ID=Msa1458320;Name=Msa1458320
tig0039520 mRNA 18929 21746 18929 ID=Msa1458320-mRNA-1;Parent=Msa1458320;Name=Msa1458320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=3|1|1|1|1|1|2|268|813
tig0039520 exon 18929 19867 18929 ID=Msa1458320-mRNA-1:exon:21694;Parent=Msa1458320-mRNA-1
tig0039520 exon 19973 21746 19973 ID=Msa1458320-mRNA-1:exon:21693;Parent=Msa1458320-mRNA-1
tig0039520 five_prime_UTR 21744 21746 21744 ID=Msa1458320-mRNA-1:five_prime_utr;Parent=Msa1458320-mRNA-1
tig0039520 CDS 19973 21743 19973 ID=Msa1458320-mRNA-1:cds;Parent=Msa1458320-mRNA-1
tig0039520 CDS 19197 19867 19197 ID=Msa1458320-mRNA-1:cds;Parent=Msa1458320-mRNA-1
tig0039520 three_prime_UTR 18929 19196 18929 ID=Msa1458320-mRNA-1:three_prime_utr;Parent=Msa1458320-mRNA-1
Gene Sequence

>Msa1458320

ATGATAATTGATAAGAATGAAATTGATTCCTCACGAATTGCATTTACATTTGCTTCTTCTCTTCTTTCATTTCAATTTTCATATACAATCATTCATATTATAAACATTAACATTAATATTGCACTGTCAGTGCATTCTGATGTTATTGCTTGGTTAAAGAAAAACAAATTAAGAAAGCCTATGGCATCCTCAACCTCAACTTTGTATCTTCTTGTAATGCTATTATTATCTGCTACAGTAATGGCATTGACCAACAAAAAAACTTACATAGTTCACATGAAACACAACAAAAATGCATCCATGTACTCTCCCATTCTCCAATCTTCTTCTTCTGATTCTCTACTTTACACCTACACTCACTCTTACAACGGTTTTGCTGCTTCCCTTGACACTCAACAAGTGCAAGCACTGCGTAGTTCTGATTCAGTTCTAGGTGTATATGAAGATACTCTGTACTCGCTGCACACTACCCGCTCCCCAGAGTTTCTGGGTCTGCTTCAAATTCAAACCCATTCTCAGTTTCTTCACCAACCTTCATACGACGTAGTTATCGGTGTACTTGACACTGGAGTATGGCCAGAATCGCAAAGTTTTCATGATTCTCAAATGCCTCAAATCCCATCTCGATGGCGTGGAAAGTGTGAATCAGCACCAGATTTCGATTCTTCACTCTGTAACAAAAAACTCATCGGTGCTCGAAGCTTCTCTAAGGGGTATCTCATGGCATCTCCTGGTGGTGGTGGTAGAAAGAAAGCAGTTGATCCTATTTCACCTCGTGACAGAGATGGACACGGTACCCATACTGCCACCACCGCTGCTGGCTCCGCCGTAGCTAACGCCACTCTTCTTGGTTACGCTACCGGAACAGCACGTGGTATGGCTCCACAGGCACGTATCGCTGTTTACAAGGTCTGCTGGACCGACGGTTGTTTCGCCTCCGACATACTCGCAGGAATAGATCAAGCGATTCAAGACGGTGTTGATGTGTTGTCACTCTCACTCGGTGGTTCATCATCCACTCCTTACTATTTCGACACCATCGCAATCGGAGCTTTTGCGGCGGTGGAGAGAGGGATATTGGTTTCTTGTTCGGCGGGGAATACTGGACCTCGCAGCGGTTCGTTATCGAATGTAGCTCCGTGGATCATGACCGTCGGAGCAGGGACTTTGGATCGGGATTTTCCGGCTTACGCTACTCTCGGAAACGGAAAACGTTTCGCCGGCGTTTCACTTTACAGTGGAGAAGGAATGGGAAACGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTTAATTCATCGAGTAGTATATGTATGCCCGGTTCACTTGACTCGGCAATCGTGCGCGGGAAAGTGGTTGTATGTGATAGAGGTGTAAACTCACGTGTGGAGAAAGGCACGGTTGTGATTGACGCTGGAGGTGTTGGGATGATTCTTGCAAACACGGCGGCGAGCGGTGAAGGAGTGGTGGCTGATAGTTACATGGTACCGGCCGTTTCGGTGGGAAAAAACGAGGGTGATGAGATTAAAAAGTATGCAGCGTTGGATTCTAATCCAACGGCTGTGCTTAGTTTCGGTGGAACTGTGTTGAACGTGAGACCTTCACCCGTGGTAGCATCTTTCAGCTCTCGTGGCCCCAATGGTGTGACGCCACAAATTCTGAAGCCTGATGTTATTGGGCCTGGCGTGAACATCTTAGCGGGATGGACCGGCGCTGTTGGGCCTTCGGGCTCACTAGACACTCGGAAAGCCCAATTCAATATCATGTCTGGAACGTCGATGTCATGTCCGCACATAAGTGGCGTGGCCGCGTTGTTGAAAGCGGCTCATCCAGAATGGAGTCCAAGTGCAATCAAATCAGCTCTGATGACAACAGCTTATACACTTGACAACACAGAGTCTCCCTTAAGGGATGCAATGGGAGAGGCCTTGTCCACGCCATGGGCTTATGGGTCAGGTCATGTCAACCCTCAAAAGGCCTTATCTCCTGGCCTTGTTTATGATGCTGACACTGAAGACTACATTGCATTCTTATGCTCTCTGAACTACACACTTGACCATGTGAAACTCATTGTCAAGCGTCCTAATGTTACTTGTTCTACCTATTTGTCTGGCCCTGGTGATCTTAATTACCCATCATTTTCTGTTGTTTTTGGAAACAATAGTGGTGTTGTTCAATACAAGCGGACACTTACTAACGTTGGGGAAGCAGAATCTGTTTATGATGTAGTTGTTAGTGGGCCATCCACGGTGGGGATAACTGTGAATCCTACCAAGCTGGTTTTTGAGCAAGTTGGTGAAAGGCAAACATATATGGTTAAGTTTATATCAAACAAAGATATTGTTGATGATTCGGTTACGTCTGAATTTGGCAGTATTACGTGGAGCAACAAACAACACCAAGTTAGGAGCCCAATTGCTTTTACATGGACAATTCTATGA
Protein sequence

>Msa1458320

MIIDKNEIDSSRIAFTFASSLLSFQFSYTIIHIINININIALSVHSDVIAWLKKNKLRKPMASSTSTLYLLVMLLLSATVMALTNKKTYIVHMKHNKNASMYSPILQSSSSDSLLYTYTHSYNGFAASLDTQQVQALRSSDSVLGVYEDTLYSLHTTRSPEFLGLLQIQTHSQFLHQPSYDVVIGVLDTGVWPESQSFHDSQMPQIPSRWRGKCESAPDFDSSLCNKKLIGARSFSKGYLMASPGGGGRKKAVDPISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTDGCFASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTIAIGAFAAVERGILVSCSAGNTGPRSGSLSNVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDSAIVRGKVVVCDRGVNSRVEKGTVVIDAGGVGMILANTAASGEGVVADSYMVPAVSVGKNEGDEIKKYAALDSNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDVIGPGVNILAGWTGAVGPSGSLDTRKAQFNIMSGTSMSCPHISGVAALLKAAHPEWSPSAIKSALMTTAYTLDNTESPLRDAMGEALSTPWAYGSGHVNPQKALSPGLVYDADTEDYIAFLCSLNYTLDHVKLIVKRPNVTCSTYLSGPGDLNYPSFSVVFGNNSGVVQYKRTLTNVGEAESVYDVVVSGPSTVGITVNPTKLVFEQVGERQTYMVKFISNKDIVDDSVTSEFGSITWSNKQHQVRSPIAFTWTIL*