AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332540 MtrunA17_Chr4g0070391 96.301 757 23 3 61 813 1 756 0.0 1493
Msa1332540 MtrunA17_Chr2g0300751 67.048 786 217 9 61 813 1 777 0.0 1049
Msa1332540 MtrunA17_Chr4g0053781 52.368 739 328 12 86 810 28 756 0.0 743
Msa1332540 MtrunA17_Chr5g0401511 50.582 773 356 14 57 812 1 764 0.0 737
Msa1332540 MtrunA17_Chr1g0204321 48.092 786 361 12 57 810 8 778 0.0 733
Msa1332540 MtrunA17_Chr1g0152771 49.354 774 360 10 61 811 1 765 0.0 706
Msa1332540 MtrunA17_Chr4g0037221 50.490 715 328 11 113 809 62 768 0.0 706
Msa1332540 MtrunA17_Chr8g0344331 49.670 757 334 17 87 811 36 777 0.0 703
Msa1332540 MtrunA17_Chr4g0020651 50.651 768 356 14 59 812 2 760 0.0 703
Msa1332540 MtrunA17_Chr3g0134621 51.365 769 310 16 68 811 9 738 0.0 691
Msa1332540 MtrunA17_Chr8g0344971 45.876 776 364 14 69 809 6 760 0.0 644
Msa1332540 MtrunA17_Chr7g0262161 46.854 747 363 13 88 810 26 762 0.0 640
Msa1332540 MtrunA17_Chr7g0246461 44.757 782 347 20 68 810 6 741 0.0 598
Msa1332540 MtrunA17_Chr3g0120521 43.454 718 366 16 109 806 70 767 0.0 575
Msa1332540 MtrunA17_Chr4g0057061 41.832 808 427 16 12 811 5 777 0.0 571
Msa1332540 MtrunA17_Chr5g0407701 41.818 770 401 15 61 806 1 747 0.0 561
Msa1332540 MtrunA17_Chr8g0369891 41.758 728 386 13 90 806 50 750 0.0 555
Msa1332540 MtrunA17_Chr4g0076611 42.938 708 374 14 114 807 1 692 0.0 549
Msa1332540 MtrunA17_Chr2g0285121 43.169 732 369 15 113 810 66 784 0.0 546
Msa1332540 MtrunA17_Chr5g0398241 44.161 745 361 16 85 807 41 752 0.0 541
Msa1332540 MtrunA17_Chr2g0285111 42.877 737 375 15 107 810 64 787 0.0 540
Msa1332540 MtrunA17_Chr5g0398401 44.161 745 361 16 85 807 41 752 0.0 539
Msa1332540 MtrunA17_Chr7g0276151 40.609 788 397 19 61 809 1 756 3.46e-180 536
Msa1332540 MtrunA17_Chr4g0057531 42.697 712 383 12 110 806 73 774 6.73e-180 536
Msa1332540 MtrunA17_Chr5g0398311 44.114 739 364 15 88 810 43 748 2.65e-179 533
Msa1332540 MtrunA17_Chr5g0398351 44.638 746 356 17 85 807 792 1503 5.33e-179 554
Msa1332540 MtrunA17_Chr5g0398351 43.666 742 368 15 85 807 22 732 4.60e-173 538
Msa1332540 MtrunA17_Chr4g0057471 41.899 716 392 14 110 812 8 712 1.53e-177 527
Msa1332540 MtrunA17_Chr5g0398331 43.011 744 369 17 88 810 43 752 8.03e-177 527
Msa1332540 MtrunA17_Chr4g0057481 43.612 681 361 14 142 810 22 691 1.14e-175 522
Msa1332540 MtrunA17_Chr4g0026641 40.104 768 416 17 64 806 3 751 1.64e-175 524
Msa1332540 MtrunA17_Chr8g0345981 39.618 785 408 21 63 809 2 758 1.78e-174 521
Msa1332540 MtrunA17_Chr7g0248871 38.726 785 405 21 67 806 8 761 1.42e-173 519
Msa1332540 MtrunA17_Chr8g0345971 41.538 715 376 18 106 806 70 756 2.16e-172 516
Msa1332540 MtrunA17_Chr1g0189251 40.278 720 380 18 106 809 69 754 1.35e-171 514
Msa1332540 MtrunA17_Chr8g0345991 39.003 782 416 23 61 809 1 754 1.34e-170 511
Msa1332540 MtrunA17_Chr5g0423261 44.497 636 325 13 189 810 2 623 3.17e-166 495
Msa1332540 MtrunA17_Chr1g0189561 39.119 772 410 22 71 806 11 758 8.96e-166 499
Msa1332540 MtrunA17_Chr3g0136151 39.578 758 396 19 85 809 34 762 1.50e-164 496
Msa1332540 MtrunA17_Chr4g0057491 43.492 630 338 11 190 810 3 623 2.24e-164 490
Msa1332540 MtrunA17_Chr4g0057461 43.128 633 339 14 190 808 3 628 1.66e-162 486
Msa1332540 MtrunA17_Chr8g0377961 39.764 762 414 17 74 807 29 773 2.62e-161 488
Msa1332540 MtrunA17_Chr8g0354771 40.867 761 404 19 79 807 16 762 3.94e-160 484
Msa1332540 MtrunA17_Chr4g0057511 43.860 627 330 13 194 810 3 617 1.36e-159 478
Msa1332540 MtrunA17_Chr7g0250411 40.604 729 392 20 107 808 69 783 7.43e-158 479
Msa1332540 MtrunA17_Chr8g0345961 37.848 790 421 20 61 811 1 759 8.44e-158 478
Msa1332540 MtrunA17_Chr3g0143251 38.501 787 407 20 68 809 11 765 1.08e-156 475
Msa1332540 MtrunA17_Chr7g0250481 39.031 743 395 21 107 806 68 795 2.17e-156 476
Msa1332540 MtrunA17_Chr7g0250371 40.685 730 387 22 107 806 69 782 9.39e-155 471
Msa1332540 MtrunA17_Chr7g0250391 39.541 784 409 24 70 806 15 780 3.17e-154 469
Msa1332540 MtrunA17_Chr2g0303881 41.250 720 365 22 114 809 41 726 6.39e-154 467
Msa1332540 MtrunA17_Chr8g0351011 39.100 711 379 20 110 806 79 749 2.12e-148 454
Msa1332540 MtrunA17_Chr8g0354741 42.791 645 325 15 179 807 16 632 1.03e-147 448
Msa1332540 MtrunA17_Chr7g0227991 36.706 771 407 20 68 806 10 731 1.98e-147 451
Msa1332540 MtrunA17_Chr7g0266051 39.441 715 367 21 113 806 34 703 1.15e-146 447
Msa1332540 MtrunA17_Chr7g0246451 38.364 709 387 21 110 806 73 743 1.64e-146 448
Msa1332540 MtrunA17_Chr6g0470851 36.870 754 413 20 71 806 19 727 1.44e-143 440
Msa1332540 MtrunA17_Chr8g0334521 36.129 775 419 20 61 806 4 731 2.35e-143 440
Msa1332540 MtrunA17_Chr7g0250331 39.102 757 383 25 107 806 69 804 2.88e-143 442
Msa1332540 MtrunA17_Chr6g0470881 36.737 754 414 20 71 806 19 727 1.28e-142 438
Msa1332540 MtrunA17_Chr1g0146251 36.292 766 406 20 71 806 19 732 5.11e-140 431
Msa1332540 MtrunA17_Chr5g0439271 41.408 611 308 18 227 806 8 599 1.20e-138 423
Msa1332540 MtrunA17_Chr1g0146271 35.550 782 416 21 61 806 1 730 1.48e-138 427
Msa1332540 MtrunA17_Chr3g0079971 35.677 768 418 22 68 806 9 729 1.86e-138 427
Msa1332540 MtrunA17_Chr1g0170081 35.411 754 425 18 71 806 19 728 1.86e-138 427
Msa1332540 MtrunA17_Chr7g0248861 40.704 597 321 13 76 663 50 622 1.44e-137 429
Msa1332540 MtrunA17_Chr7g0248861 53.275 229 100 4 181 408 637 859 2.78e-66 237
Msa1332540 MtrunA17_Chr8g0334491 36.497 748 392 25 87 806 33 725 7.12e-130 405
Msa1332540 MtrunA17_Chr8g0376841 39.966 583 287 18 80 629 33 585 6.11e-117 366
Msa1332540 MtrunA17_Chr4g0071871 33.890 779 423 28 88 806 65 811 1.11e-109 354
Msa1332540 MtrunA17_Chr5g0447171 37.160 514 260 8 343 807 7 506 6.51e-104 330
Msa1332540 MtrunA17_Chr2g0298601 34.416 770 431 27 88 806 65 811 3.66e-103 337
Msa1332540 MtrunA17_Chr2g0301011 34.892 556 281 14 143 693 4 483 2.65e-95 306
Msa1332540 MtrunA17_Chr8g0380961 34.179 749 415 27 115 807 118 844 3.98e-95 316
Msa1332540 MtrunA17_Chr2g0302951 33.773 758 417 28 115 812 110 842 2.24e-94 314
Msa1332540 MtrunA17_Chr4g0075331 33.380 716 409 23 105 768 2 701 2.69e-92 306
Msa1332540 MtrunA17_Chr3g0143241 37.759 482 238 17 68 512 11 467 2.11e-82 274
Msa1332540 MtrunA17_Chr7g0261691 43.235 340 170 7 186 512 13 342 7.55e-82 266
Msa1332540 MtrunA17_Chr7g0250461 39.320 412 226 11 107 500 69 474 6.64e-80 265
Msa1332540 MtrunA17_Chr7g0261701 43.197 294 151 8 516 806 7 287 1.71e-70 234
Msa1332540 MtrunA17_Chr4g0026651 41.667 312 148 6 132 412 5 313 3.04e-69 231
Msa1332540 MtrunA17_Chr4g0035881 40.822 365 158 8 268 625 4 317 7.30e-69 230
Msa1332540 MtrunA17_Chr6g0480721 40.256 313 161 6 101 411 1 289 1.95e-66 233
Msa1332540 MtrunA17_Chr6g0480721 41.026 312 154 11 506 806 305 597 6.85e-58 209
Msa1332540 MtrunA17_Chr7g0250441 44.086 279 146 6 533 808 11 282 7.13e-63 214
Msa1332540 MtrunA17_Chr3g0105451 38.966 290 150 6 528 809 9 279 2.70e-59 202
Msa1332540 MtrunA17_Chr3g0097061 38.438 320 166 7 143 455 4 299 3.94e-59 207
Msa1332540 MtrunA17_Chr3g0097061 45.794 107 50 2 585 691 331 429 6.60e-24 105
Msa1332540 MtrunA17_Chr8g0346361 41.844 282 148 8 529 806 225 494 4.44e-57 203
Msa1332540 MtrunA17_Chr8g0346361 47.030 202 86 4 206 406 7 188 1.25e-48 179
Msa1332540 MtrunA17_Chr4g0026661 43.307 254 135 6 554 806 12 257 1.33e-56 195
Msa1332540 MtrunA17_Chr3g0105461 37.536 349 160 8 67 402 14 317 1.28e-54 192
Msa1332540 MtrunA17_Chr3g0103071 35.374 294 162 4 316 592 1 283 2.36e-53 186
Msa1332540 MtrunA17_Chr2g0301911 34.146 369 191 10 203 557 30 360 2.45e-46 170
Msa1332540 MtrunA17_Chr2g0312861 36.015 261 142 9 554 806 1 244 4.01e-45 164
Msa1332540 MtrunA17_Chr2g0301031 37.354 257 144 8 554 806 1 244 1.28e-43 158
Msa1332540 MtrunA17_Chr2g0312841 41.579 190 91 3 206 394 12 182 4.03e-39 143
Msa1332540 MtrunA17_Chr4g0071191 39.269 219 120 6 519 734 42 250 1.03e-38 144
Msa1332540 MtrunA17_Chr5g0436021 45.562 169 77 2 228 394 31 186 3.20e-37 138
Msa1332540 MtrunA17_Chr3g0103061 33.955 268 143 8 64 306 2 260 2.29e-36 138
Msa1332540 MtrunA17_Chr2g0301921 36.111 216 122 7 594 806 1 203 3.73e-34 130
Msa1332540 MtrunA17_Chr5g0418921 45.985 137 70 3 523 656 1 136 1.40e-31 121
Msa1332540 MtrunA17_Chr2g0301021 28.241 432 190 14 67 479 13 343 3.47e-31 126
Msa1332540 MtrunA17_Chr8g0376851 35.976 164 97 5 648 807 11 170 5.22e-26 105
Msa1332540 MtrunA17_Chr3g0142981 44.371 151 48 3 259 403 50 170 5.41e-26 106
Msa1332540 MtrunA17_Chr5g0436031 36.095 169 101 4 640 806 15 178 2.86e-24 102
Msa1332540 MtrunA17_Chr3g0103081 34.247 146 90 3 661 806 1 140 7.92e-21 89.7
Msa1332540 MtrunA17_Chr3g0142971 50.588 85 42 0 537 621 1 85 2.36e-20 86.3
Msa1332540 MtrunA17_Chr3g0143231 49.438 89 45 0 537 625 1 89 3.44e-20 85.9
Msa1332540 MtrunA17_Chr3g0143021 39.216 102 61 1 113 214 6 106 6.51e-20 85.9
Msa1332540 MtrunA17_Chr5g0398341 47.423 97 50 1 594 690 1 96 1.53e-19 84.3
Msa1332540 MtrunA17_Chr3g0143221 30.435 184 99 5 633 809 2 163 1.13e-17 81.3
Msa1332540 MtrunA17_Chr7g0248851 34.437 151 89 5 661 807 1 145 1.40e-17 80.5
Msa1332540 MtrunA17_Chr4g0035871 34.266 143 65 3 101 227 21 150 3.33e-17 79.7
Msa1332540 MtrunA17_Chr8g0346961 37.190 121 66 5 623 737 1 117 1.09e-16 77.0
Msa1332540 MtrunA17_Chr3g0077671 52.857 70 32 1 585 653 237 306 1.28e-16 81.6
Msa1332540 MtrunA17_Chr5g0439281 30.233 172 91 8 86 229 27 197 4.50e-14 71.6
Msa1332540 MtrunA17_Chr8g0346351 33.784 148 83 4 65 200 12 156 1.72e-13 69.3
Msa1332540 MtrunA17_Chr3g0142961 30.657 137 89 3 633 764 2 137 7.45e-13 66.6
Msa1332540 MtrunA17_Chr3g0143011 57.143 49 21 0 355 403 1 49 1.64e-12 63.5
Msa1332540 MtrunA17_Chr8g0354731 36.441 118 60 4 87 189 52 169 3.01e-12 65.9
Msa1332540 MtrunA17_Chr5g0434941 47.297 74 36 1 321 391 1 74 4.59e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332540 AT2G05920.1 65.768 742 232 10 80 810 21 751 0.0 974
Msa1332540 AT5G67360.1 53.553 760 332 12 64 811 7 757 0.0 771
Msa1332540 AT3G14067.1 50.519 770 352 13 63 810 7 769 0.0 729
Msa1332540 AT4G34980.1 48.889 765 369 12 61 809 1 759 0.0 711
Msa1332540 AT5G51750.1 47.765 783 373 11 54 810 4 776 0.0 709
Msa1332540 AT3G14240.1 48.865 749 351 12 88 809 27 770 0.0 689
Msa1332540 AT1G04110.1 45.396 771 380 14 71 809 10 771 0.0 622
Msa1332540 AT1G01900.1 44.267 750 380 14 84 810 39 773 0.0 584
Msa1332540 AT2G04160.1 43.533 719 369 16 107 806 68 768 0.0 568
Msa1332540 AT5G45650.2 42.219 784 377 19 85 809 23 789 0.0 545
Msa1332540 AT5G45650.1 42.219 784 377 19 85 809 23 789 0.0 545
Msa1332540 AT5G59810.1 42.098 715 379 15 107 806 78 772 2.45e-180 537
Msa1332540 AT1G20160.1 39.367 790 394 20 66 809 12 762 1.25e-161 489
Msa1332540 AT4G10520.1 38.939 773 428 20 61 813 1 749 3.39e-161 487
Msa1332540 AT1G20160.2 40.299 737 364 17 111 809 25 723 8.72e-160 483
Msa1332540 AT4G10540.1 40.163 737 382 18 107 813 61 768 9.35e-154 468
Msa1332540 AT4G10550.4 40.522 728 391 16 107 813 9 715 1.87e-153 466
Msa1332540 AT4G10550.2 40.522 728 391 16 107 813 9 715 1.87e-153 466
Msa1332540 AT4G10550.1 40.522 728 391 16 107 813 65 771 3.34e-153 467
Msa1332540 AT4G10550.3 40.522 728 391 16 107 813 81 787 9.83e-153 466
Msa1332540 AT5G67090.1 37.616 755 405 18 71 800 5 718 1.99e-151 461
Msa1332540 AT1G66220.1 37.161 775 422 19 61 807 6 743 9.23e-151 460
Msa1332540 AT1G20150.1 37.319 761 415 17 89 809 33 771 3.98e-150 459
Msa1332540 AT5G59090.1 38.844 744 387 22 85 806 29 726 4.30e-150 457
Msa1332540 AT5G59090.3 38.844 744 385 23 85 806 29 724 7.44e-149 454
Msa1332540 AT4G10530.1 38.021 768 416 20 69 813 10 740 8.86e-149 454
Msa1332540 AT5G59090.2 38.575 744 384 21 85 806 29 721 2.26e-148 453
Msa1332540 AT5G59120.1 38.606 746 386 21 85 806 28 725 2.20e-147 451
Msa1332540 AT5G58840.1 37.404 778 394 23 61 812 1 711 4.70e-147 449
Msa1332540 AT1G32960.1 39.211 760 415 19 84 813 28 770 7.33e-147 451
Msa1332540 AT4G26330.2 38.611 720 408 17 107 806 14 719 1.31e-146 449
Msa1332540 AT4G10510.4 39.945 726 397 17 107 813 9 714 1.46e-146 448
Msa1332540 AT5G59100.1 37.751 747 398 22 85 806 31 735 2.81e-146 448
Msa1332540 AT4G10510.2 40.195 719 391 17 114 813 1 699 4.72e-146 446
Msa1332540 AT3G46840.1 37.877 763 410 20 66 806 12 732 5.38e-146 447
Msa1332540 AT4G10510.1 39.945 726 397 17 107 813 53 758 5.52e-146 448
Msa1332540 AT1G32940.4 39.431 738 400 19 101 813 1 716 7.85e-146 446
Msa1332540 AT1G32940.2 39.431 738 400 19 101 813 1 716 7.85e-146 446
Msa1332540 AT4G10510.3 39.945 726 397 17 107 813 65 770 9.60e-146 448
Msa1332540 AT4G00230.1 38.472 720 382 18 105 806 65 741 2.93e-145 446
Msa1332540 AT1G32940.1 39.431 738 400 19 101 813 52 767 5.83e-145 446
Msa1332540 AT5G03620.1 37.643 789 401 22 68 806 9 756 5.95e-145 445
Msa1332540 AT1G66210.1 36.649 764 428 20 68 807 18 749 3.26e-144 443
Msa1332540 AT5G59130.4 36.815 766 401 23 69 806 13 723 3.05e-143 440
Msa1332540 AT1G32950.1 37.949 780 434 18 65 813 6 766 9.89e-143 440
Msa1332540 AT4G26330.1 37.875 734 408 18 107 806 14 733 1.34e-142 439
Msa1332540 AT5G59130.1 36.945 766 396 24 69 806 13 719 4.61e-142 437
Msa1332540 AT5G58820.1 37.831 756 388 21 69 806 7 698 4.63e-142 436
Msa1332540 AT5G59130.2 36.945 766 390 23 69 806 13 713 7.52e-142 436
Msa1332540 AT1G32950.2 39.373 734 405 17 101 813 1 715 1.97e-141 435
Msa1332540 AT4G21650.1 37.042 764 410 19 84 812 37 764 2.06e-141 436
Msa1332540 AT5G59190.1 39.241 711 368 21 109 806 27 686 2.98e-140 431
Msa1332540 AT5G58830.1 35.968 759 402 18 66 806 11 703 7.88e-140 430
Msa1332540 AT3G46850.1 37.188 761 419 20 66 806 11 732 1.35e-139 431
Msa1332540 AT5G59130.3 37.001 727 390 20 93 806 13 684 8.31e-139 427
Msa1332540 AT4G21630.1 37.321 769 414 20 75 812 26 757 9.05e-138 426
Msa1332540 AT5G11940.1 39.251 721 381 20 107 807 68 751 1.38e-137 426
Msa1332540 AT4G21640.1 36.658 772 387 21 75 812 28 731 1.24e-133 415
Msa1332540 AT5G45640.1 37.668 746 374 19 121 807 37 750 1.72e-133 415
Msa1332540 AT4G21323.1 37.167 713 407 16 107 808 111 793 1.40e-126 399
Msa1332540 AT4G15040.2 36.463 735 403 22 82 806 3 683 6.24e-123 385
Msa1332540 AT4G15040.1 36.463 735 403 22 82 806 3 683 6.24e-123 385
Msa1332540 AT4G21326.1 37.022 732 402 22 101 813 1 692 1.09e-122 385
Msa1332540 AT5G03620.2 39.933 596 291 15 68 625 9 575 1.06e-119 374
Msa1332540 AT1G32970.1 34.545 770 430 22 70 813 6 727 7.30e-116 369
Msa1332540 AT1G32940.3 40.998 561 292 15 101 637 52 597 7.93e-113 357
Msa1332540 AT4G00230.2 40.187 535 275 12 105 625 65 568 6.81e-111 351
Msa1332540 AT5G58840.3 37.265 585 293 14 61 625 1 531 1.08e-109 346
Msa1332540 AT2G19170.1 34.278 776 436 26 84 806 54 808 4.41e-107 347
Msa1332540 AT2G19170.2 34.278 776 436 26 84 806 54 808 4.41e-107 347
Msa1332540 AT4G30020.3 33.719 777 429 26 88 806 61 809 1.19e-103 338
Msa1332540 AT4G30020.1 33.719 777 429 26 88 806 61 809 1.19e-103 338
Msa1332540 AT4G30020.4 33.719 777 429 26 88 806 61 809 1.19e-103 338
Msa1332540 AT4G30020.2 33.719 777 429 26 88 806 61 809 1.19e-103 338
Msa1332540 AT4G20430.3 33.377 764 413 26 115 812 119 852 8.41e-102 334
Msa1332540 AT4G20430.1 33.377 764 413 26 115 812 119 852 8.41e-102 334
Msa1332540 AT4G20430.2 33.333 756 400 26 115 812 119 828 6.70e-98 323
Msa1332540 AT5G44530.1 33.113 758 409 24 115 806 106 831 7.75e-98 323
Msa1332540 AT1G20160.3 39.279 527 253 14 66 555 12 508 1.58e-96 312
Msa1332540 AT2G39850.1 32.225 782 424 32 86 806 27 763 4.94e-96 317
Msa1332540 AT1G30600.1 32.279 759 427 25 115 812 98 830 6.22e-94 313
Msa1332540 AT5G44530.2 32.056 783 409 25 115 806 106 856 8.90e-93 310
Msa1332540 AT1G62340.1 32.157 737 425 20 82 758 62 783 1.18e-85 290
Msa1332540 AT5G58840.2 35.019 514 261 13 61 555 1 460 4.30e-80 266
Msa1332540 AT5G44530.3 32.549 510 277 15 115 572 106 600 8.06e-60 214
Msa1332540 AT1G32980.1 40.741 189 108 3 590 777 3 188 3.00e-38 141
Msa1332540 AT5G59110.1 39.634 164 90 6 650 808 7 166 3.79e-26 106

Find 230 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCCGCACCCCAGAGTTTC+TGG 0.144133 8_4:-52507659 Msa1332540:CDS
TCATGAAAACTTTGCGATTC+TGG 0.163852 8_4:+52507550 None:intergenic
TTGTCCACGCCATGGGCTTA+TGG 0.184304 8_4:-52506094 Msa1332540:CDS
CGTAGTTCTGATTCAGTTCT+AGG 0.212113 8_4:-52507715 Msa1332540:CDS
ATTGCACTTGGACTCCATTC+TGG 0.221958 8_4:+52506193 None:intergenic
TCTTGTTCGGCGGGGAATAC+TGG 0.237638 8_4:-52507043 Msa1332540:CDS
GATTCGGTTACGTCTGAATT+TGG 0.251704 8_4:-52505674 Msa1332540:CDS
CAGCAGCGGTGGTGGCAGTA+TGG 0.254435 8_4:+52507329 None:intergenic
ATTCTGAAGCCTGATGTTAT+TGG 0.261578 8_4:-52506470 Msa1332540:CDS
GACCGGCGCTGTTGGGCCTT+CGG 0.291436 8_4:-52506420 Msa1332540:CDS
TGTCCACGCCATGGGCTTAT+GGG 0.322451 8_4:-52506093 Msa1332540:CDS
TACCAGACATGATATTGAAT+TGG 0.324634 8_4:+52506375 None:intergenic
TAGGGCTAGGCTACTGCTAT+TGG 0.325456 8_4:+52505550 None:intergenic
ATTGTCCATGTAAAAGCAAT+TGG 0.328392 8_4:+52505611 None:intergenic
TGGACAATTCTATGAAGATT+TGG 0.329159 8_4:-52505596 Msa1332540:exon
TTCTGAAGCCTGATGTTATT+GGG 0.334006 8_4:-52506469 Msa1332540:CDS
ACCGGCGCTGTTGGGCCTTC+GGG 0.334396 8_4:-52506419 Msa1332540:CDS
TCTCTGTCACGAGGTGAAAT+AGG 0.335194 8_4:+52507364 None:intergenic
CAAAGATATTGTTGATGATT+CGG 0.338233 8_4:-52505690 Msa1332540:CDS
CTCTCCCATTGCATCCCTTA+AGG 0.338316 8_4:+52506120 None:intergenic
CGGTGCTCGAAGCTTCTCTA+AGG 0.347369 8_4:-52507437 Msa1332540:CDS
GTAGCTAACGCCACTCTTCT+TGG 0.348716 8_4:-52507298 Msa1332540:CDS
CCTTCATACGACGTAGTTAT+CGG 0.352820 8_4:-52507595 Msa1332540:CDS
ACTTGTTCTACCTATTTGTC+TGG 0.376027 8_4:-52505932 Msa1332540:CDS
ATTTGTGGCGTCACACCATT+GGG 0.378777 8_4:+52506491 None:intergenic
GCAACAAACAACACCAAGTT+AGG 0.379170 8_4:-52505637 Msa1332540:CDS
AGCCATACCACGTGCTGTTC+CGG 0.380550 8_4:+52507267 None:intergenic
GGGAAACGAACCGGTTGGTT+TGG 0.384425 8_4:-52506876 Msa1332540:CDS
GAAGAAGAAGATTGGAGAAT+GGG 0.387190 8_4:+52507817 None:intergenic
TGGTGAAAGGCAAACATATA+TGG 0.391086 8_4:-52505729 Msa1332540:CDS
GAGAATCAGAAGAAGAAGAT+TGG 0.391706 8_4:+52507809 None:intergenic
GAAAGAAAGCAGCAGCTGTT+TGG 0.395226 8_4:-52505498 Msa1332540:three_prime_UTR
AGGGATATTGGTTTCTTGTT+CGG 0.398568 8_4:-52507056 Msa1332540:CDS
GGCGGTGGAGAGAGGGATAT+TGG 0.399219 8_4:-52507068 Msa1332540:CDS
TTACATGGTACCGGCCGTTT+CGG 0.400307 8_4:-52506648 Msa1332540:CDS
GTGTACTTGACACTGGAGTA+TGG 0.406869 8_4:-52507573 Msa1332540:CDS
AGCGGACACTTACTAACGTT+GGG 0.409089 8_4:-52505841 Msa1332540:CDS
CCAACGGCTGTGCTTAGTTT+CGG 0.409141 8_4:-52506572 Msa1332540:CDS
GCGGGATGGACCGGCGCTGT+TGG 0.410208 8_4:-52506428 Msa1332540:CDS
TAGGTAGAACAAGTAACATT+AGG 0.416299 8_4:+52505941 None:intergenic
CAACACAGAGTCTCCCTTAA+GGG 0.417194 8_4:-52506134 Msa1332540:CDS
TTGGAGAATGGGAGAGTACA+TGG 0.420480 8_4:+52507828 None:intergenic
CATACTGCCACCACCGCTGC+TGG 0.421386 8_4:-52507328 Msa1332540:CDS
TCTCCCATTGCATCCCTTAA+GGG 0.426619 8_4:+52506121 None:intergenic
CGCCATCGAGATGGGATTTG+AGG 0.427411 8_4:+52507517 None:intergenic
GACCGTCGGAGCAGGGACTT+TGG 0.431677 8_4:-52506978 Msa1332540:CDS
AATTTGTGGCGTCACACCAT+TGG 0.431759 8_4:+52506490 None:intergenic
GGCGGAGCCAGCAGCGGTGG+TGG 0.433974 8_4:+52507321 None:intergenic
ACCAGACATGATATTGAATT+GGG 0.436531 8_4:+52506376 None:intergenic
ATCACCAGGGCCAGACAAAT+AGG 0.437197 8_4:+52505922 None:intergenic
AGGGCTAGGCTACTGCTATT+GGG 0.439811 8_4:+52505551 None:intergenic
ACCCGCACCCCAGAGTTTCT+GGG 0.441048 8_4:-52507658 Msa1332540:CDS
ACGCCATGGGCTTATGGGTC+AGG 0.441455 8_4:-52506088 Msa1332540:CDS
TGAAGCAGACCCAGAAACTC+TGG 0.442077 8_4:+52507649 None:intergenic
TCTACCTATTTGTCTGGCCC+TGG 0.446108 8_4:-52505926 Msa1332540:CDS
AGAAGAAGAAGATTGGAGAA+TGG 0.447698 8_4:+52507816 None:intergenic
TTAAAATAAACCAAACCAAC+CGG 0.448597 8_4:+52506866 None:intergenic
CATGGTACCGGCCGTTTCGG+TGG 0.448613 8_4:-52506645 Msa1332540:CDS
CAGAGTGAAGAATCGAAATC+TGG 0.448619 8_4:+52507475 None:intergenic
AAGCAATTGGGCTCCTAACT+TGG 0.449411 8_4:+52505624 None:intergenic
GATTGCCGAGTCAAGTGAAC+CGG 0.453450 8_4:+52506808 None:intergenic
GCCCAATTCAATATCATGTC+TGG 0.454733 8_4:-52506377 Msa1332540:intron
GGGTATCTCATGGCATCTCC+TGG 0.456433 8_4:-52507415 Msa1332540:CDS
TATTTCGACACCATCGCAAT+CGG 0.458637 8_4:-52507100 Msa1332540:CDS
ACAACACAGAGTCTCCCTTA+AGG 0.459169 8_4:-52506135 Msa1332540:CDS
GTGATTGACGCTGGAGGTGT+TGG 0.460349 8_4:-52506722 Msa1332540:CDS
TGGATCATGACCGTCGGAGC+AGG 0.465301 8_4:-52506986 Msa1332540:CDS
ACATCAGGCTTCAGAATTTG+TGG 0.467262 8_4:+52506476 None:intergenic
ACTCTTCTTGGTTACGCTAC+CGG 0.467899 8_4:-52507286 Msa1332540:CDS
GTTTATGATGTAGTTGTTAG+TGG 0.469150 8_4:-52505806 Msa1332540:CDS
AAGCCTGATGTTATTGGGCC+TGG 0.469767 8_4:-52506464 Msa1332540:CDS
ACTTTACAGTGGAGAAGGAA+TGG 0.472274 8_4:-52506897 Msa1332540:CDS
AGAGGCCTTGTCCACGCCAT+GGG 0.478438 8_4:-52506101 Msa1332540:CDS
ACCCAGAAACTCTGGGGTGC+GGG 0.478882 8_4:+52507657 None:intergenic
ATAAACAAGGCCAGGAGATA+AGG 0.479504 8_4:+52506045 None:intergenic
AGCAGCGGTGGTGGCAGTAT+GGG 0.480916 8_4:+52507330 None:intergenic
AGAGCTGATTTGATTGCACT+TGG 0.485556 8_4:+52506181 None:intergenic
CGGAGCAGGGACTTTGGATC+GGG 0.487286 8_4:-52506972 Msa1332540:CDS
CTTTACAGTGGAGAAGGAAT+GGG 0.487413 8_4:-52506896 Msa1332540:CDS
GGCACGTATCGCTGTTTACA+AGG 0.489529 8_4:-52507239 Msa1332540:CDS
AAACAAATTAAGAAAGCCTA+TGG 0.493389 8_4:-52507965 Msa1332540:CDS
AACACGGCGGCGAGCGGTGA+AGG 0.493506 8_4:-52506686 Msa1332540:CDS
AACATCTTAGCGGGATGGAC+CGG 0.494597 8_4:-52506437 Msa1332540:CDS
GACCCAGAAACTCTGGGGTG+CGG 0.496444 8_4:+52507656 None:intergenic
GTCTCCCTTAAGGGATGCAA+TGG 0.498480 8_4:-52506125 Msa1332540:CDS
CACTTTCCACGCCATCGAGA+TGG 0.500509 8_4:+52507508 None:intergenic
AAATCAACTACAATAGGGCT+AGG 0.504370 8_4:+52505537 None:intergenic
ATGGCATCTCCTGGTGGTGG+TGG 0.505205 8_4:-52507406 Msa1332540:CDS
GAGAGGCCTTGTCCACGCCA+TGG 0.507862 8_4:-52506102 Msa1332540:CDS
GCAGCAGCTGTTTGGAGCTG+TGG 0.509203 8_4:-52505490 Msa1332540:three_prime_UTR
CCGATAACTACGTCGTATGA+AGG 0.509460 8_4:+52507595 None:intergenic
TTGTCCATGTAAAAGCAATT+GGG 0.510251 8_4:+52505612 None:intergenic
TGCATTCTGATGTTATTGCT+TGG 0.511280 8_4:-52507996 Msa1332540:CDS
CCTCAAAAGGCCTTATCTCC+TGG 0.511355 8_4:-52506055 Msa1332540:CDS
TACGGCGGAGCCAGCAGCGG+TGG 0.512373 8_4:+52507318 None:intergenic
AGGTCATGTCAACCCTCAAA+AGG 0.512794 8_4:-52506068 Msa1332540:CDS
TACCGGAACAGCACGTGGTA+TGG 0.512993 8_4:-52507269 Msa1332540:CDS
ATGTCATGTCCGCACATAAG+TGG 0.513714 8_4:-52506244 Msa1332540:CDS
TTCAGCTCTCGTGGCCCCAA+TGG 0.516803 8_4:-52506506 Msa1332540:CDS
ATGTTATGTCATAGACTGCT+AGG 0.518347 8_4:+52505373 None:intergenic
CCCGCTAAGATGTTCACGCC+AGG 0.518631 8_4:+52506446 None:intergenic
TGATTGACGCTGGAGGTGTT+GGG 0.520092 8_4:-52506721 Msa1332540:CDS
AAGATACAAAGTTGAGGTTG+AGG 0.522887 8_4:+52507939 None:intergenic
GCCCGAAGGCCCAACAGCGC+CGG 0.523502 8_4:+52506418 None:intergenic
ACCTACACTCACTCTTACAA+CGG 0.523770 8_4:-52507778 Msa1332540:CDS
TCGCTGTTTACAAGGTCTGC+TGG 0.524156 8_4:-52507231 Msa1332540:CDS
AGAAGGAATGGGAAACGAAC+CGG 0.526234 8_4:-52506885 Msa1332540:CDS
TTTATGATGTAGTTGTTAGT+GGG 0.526742 8_4:-52505805 Msa1332540:CDS
GCGATGGTGTCGAAATAGTA+AGG 0.529219 8_4:+52507106 None:intergenic
GTAAACTCACGTGTGGAGAA+AGG 0.531274 8_4:-52506752 Msa1332540:CDS
ACTTTCCACGCCATCGAGAT+GGG 0.533299 8_4:+52507509 None:intergenic
ATAAGCCCATGGCGTGGACA+AGG 0.534719 8_4:+52506096 None:intergenic
AAACATACTCTAATCGTACT+TGG 0.535717 8_4:+52505339 None:intergenic
TCAGCATCATAAACAAGGCC+AGG 0.537214 8_4:+52506037 None:intergenic
ATTATTATCTGCTACAGTAA+TGG 0.537590 8_4:-52507905 Msa1332540:CDS
CTCATGGCATCTCCTGGTGG+TGG 0.537670 8_4:-52507409 Msa1332540:CDS
AGCACGTGGTATGGCTCCAC+AGG 0.539879 8_4:-52507260 Msa1332540:CDS
ACGCCAGGCCCAATAACATC+AGG 0.542572 8_4:+52506461 None:intergenic
GGCTGATAGTTACATGGTAC+CGG 0.542763 8_4:-52506657 Msa1332540:CDS
ACAGTTATCCCCACCGTGGA+TGG 0.543147 8_4:+52505782 None:intergenic
ATATTGGTTTCTTGTTCGGC+GGG 0.545016 8_4:-52507052 Msa1332540:CDS
GTTTCACTTTACAGTGGAGA+AGG 0.545197 8_4:-52506902 Msa1332540:CDS
GTTAGTGGGCCATCCACGGT+GGG 0.545428 8_4:-52505791 Msa1332540:CDS
TTTCCGGCTTACGCTACTCT+CGG 0.546885 8_4:-52506947 Msa1332540:CDS
AACTGTGAATCCTACCAAGC+TGG 0.547180 8_4:-52505765 Msa1332540:CDS
CTTGGCCGCGTTGTTGAAAG+CGG 0.549621 8_4:-52506221 Msa1332540:CDS
AGCTACGGCGGAGCCAGCAG+CGG 0.550452 8_4:+52507315 None:intergenic
ATGGTACCGGCCGTTTCGGT+GGG 0.550677 8_4:-52506644 Msa1332540:CDS
ATCTATTCCTGCGAGTATGT+CGG 0.550739 8_4:+52507189 None:intergenic
GGCGGCGAGCGGTGAAGGAG+TGG 0.552082 8_4:-52506681 Msa1332540:CDS
GAAGCAGACCCAGAAACTCT+GGG 0.553230 8_4:+52507650 None:intergenic
CCTGGCGTGAACATCTTAGC+GGG 0.554247 8_4:-52506446 Msa1332540:CDS
TTGGTGAAGAAACTGAGAAT+GGG 0.555837 8_4:+52507618 None:intergenic
GTTGGTGAAGAAACTGAGAA+TGG 0.559666 8_4:+52507617 None:intergenic
TCGGAGCAGGGACTTTGGAT+CGG 0.560028 8_4:-52506973 Msa1332540:CDS
TGAAAGCGGCTCATCCAGAA+TGG 0.560236 8_4:-52506207 Msa1332540:CDS
TCGAGTAGTATATGTATGCC+CGG 0.561085 8_4:-52506827 Msa1332540:CDS
TGGGATGATTCTTGCAAACA+CGG 0.561178 8_4:-52506702 Msa1332540:CDS
ATGTCCGCACATAAGTGGCT+TGG 0.561592 8_4:-52506239 Msa1332540:CDS
TACAAGGTCTGCTGGACCGA+CGG 0.562470 8_4:-52507223 Msa1332540:CDS
AAGAAGAGTGGCGTTAGCTA+CGG 0.562897 8_4:+52507300 None:intergenic
TTCGCCTCCGACATACTCGC+AGG 0.566678 8_4:-52507196 Msa1332540:CDS
TTTCCGAGAGTAGCGTAAGC+CGG 0.567121 8_4:+52506944 None:intergenic
TATCTCATGGCATCTCCTGG+TGG 0.568109 8_4:-52507412 Msa1332540:CDS
CTGAATTTGGCAGTATTACG+TGG 0.571708 8_4:-52505661 Msa1332540:CDS
GGTGCTCGAAGCTTCTCTAA+GGG 0.571839 8_4:-52507436 Msa1332540:CDS
GATATTGGTTTCTTGTTCGG+CGG 0.572540 8_4:-52507053 Msa1332540:CDS
GTTGAGGTTGAGGATGCCAT+AGG 0.575113 8_4:+52507949 None:intergenic
AAAGATGCTACCACGGGTGA+AGG 0.575323 8_4:+52506527 None:intergenic
CAGCAGCTGTTTGGAGCTGT+GGG 0.575642 8_4:-52505489 Msa1332540:three_prime_UTR
TAACTACGTCGTATGAAGGT+TGG 0.577564 8_4:+52507599 None:intergenic
TTCTTTCTACCACCACCACC+AGG 0.579198 8_4:+52507397 None:intergenic
GCCTGGCGTGAACATCTTAG+CGG 0.579895 8_4:-52506447 Msa1332540:CDS
GATGGGTAATTAAGATCACC+AGG 0.581944 8_4:+52505908 None:intergenic
CTTCTCTAAGGGGTATCTCA+TGG 0.582430 8_4:-52507425 Msa1332540:CDS
ACGGCTGTGCTTAGTTTCGG+TGG 0.584449 8_4:-52506569 Msa1332540:CDS
CAAATCCCATCTCGATGGCG+TGG 0.585048 8_4:-52507514 Msa1332540:CDS
GGCACGGTTGTGATTGACGC+TGG 0.585266 8_4:-52506731 Msa1332540:CDS
CGCAAAAGCTCCGATTGCGA+TGG 0.585467 8_4:+52507090 None:intergenic
ATCCAAAGTCCCTGCTCCGA+CGG 0.586633 8_4:+52506976 None:intergenic
TCTCCCTTAAGGGATGCAAT+GGG 0.587215 8_4:-52506124 Msa1332540:CDS
CTTCGGGCTCACAAGACACT+CGG 0.587265 8_4:-52506403 Msa1332540:CDS
TTGCACTTGTTGAGTGTCAA+GGG 0.587760 8_4:+52507744 None:intergenic
GGATCATGACCGTCGGAGCA+GGG 0.589828 8_4:-52506985 Msa1332540:CDS
CTTGACTCGGCAATCGTGCG+CGG 0.590936 8_4:-52506800 Msa1332540:CDS
CAGTATCAGCATCATAAACA+AGG 0.590945 8_4:+52506032 None:intergenic
AAAGTGGTTGTATGTGATAG+AGG 0.591716 8_4:-52506776 Msa1332540:CDS
CTTGCACTTGTTGAGTGTCA+AGG 0.593239 8_4:+52507743 None:intergenic
GATGTGTTGTCACTCTCACT+CGG 0.593420 8_4:-52507145 Msa1332540:CDS
ATTTCACCTCGTGACAGAGA+TGG 0.593977 8_4:-52507361 Msa1332540:CDS
AGTTGTTAGTGGGCCATCCA+CGG 0.595088 8_4:-52505795 Msa1332540:CDS
GCTTACGCTACTCTCGGAAA+CGG 0.597426 8_4:-52506941 Msa1332540:CDS
GTGGGATGTTGATGTTGCAA+AGG 0.599665 8_4:-52505471 Msa1332540:three_prime_UTR
CTTAAGGGATGCAATGGGAG+AGG 0.600444 8_4:-52506119 Msa1332540:CDS
AGCGTTGGATTCTAATCCAA+CGG 0.600590 8_4:-52506588 Msa1332540:CDS
GGCGAGCGGTGAAGGAGTGG+TGG 0.600946 8_4:-52506678 Msa1332540:CDS
ATTGCCGAGTCAAGTGAACC+GGG 0.601407 8_4:+52506809 None:intergenic
CTTGCAAACACGGCGGCGAG+CGG 0.601628 8_4:-52506692 Msa1332540:CDS
GCGTGAACATCTTAGCGGGA+TGG 0.607911 8_4:-52506442 Msa1332540:CDS
GGAAACGGAATACGTTTCGC+CGG 0.609170 8_4:-52506926 Msa1332540:CDS
AAGCGGACACTTACTAACGT+TGG 0.609439 8_4:-52505842 Msa1332540:CDS
TACAAGAAGATACAAAGTTG+AGG 0.609951 8_4:+52507933 None:intergenic
GCTCCGACGGTCATGATCCA+CGG 0.612687 8_4:+52506989 None:intergenic
TGGGATGTTGATGTTGCAAA+GGG 0.615816 8_4:-52505470 Msa1332540:three_prime_UTR
GTTATCGGTGTACTTGACAC+TGG 0.621282 8_4:-52507580 Msa1332540:CDS
TATGCCCGGTTCACTTGACT+CGG 0.625542 8_4:-52506813 Msa1332540:CDS
TGCCTCAAATCCCATCTCGA+TGG 0.627913 8_4:-52507519 Msa1332540:CDS
GTAGCATCTTTCAGCTCTCG+TGG 0.630684 8_4:-52506515 Msa1332540:CDS
TGTTAGTGGGCCATCCACGG+TGG 0.633368 8_4:-52505792 Msa1332540:CDS
CCGAAACTAAGCACAGCCGT+TGG 0.639798 8_4:+52506572 None:intergenic
GTGGTGTTGTTCAATACAAG+CGG 0.645961 8_4:-52505859 Msa1332540:CDS
TAAACAGCGATACGTGCCTG+TGG 0.645964 8_4:+52507244 None:intergenic
TGACCTGACCCATAAGCCCA+TGG 0.650261 8_4:+52506085 None:intergenic
TTAGTGGGCCATCCACGGTG+GGG 0.650964 8_4:-52505790 Msa1332540:CDS
TCCACTGTAAAGTGAAACGC+CGG 0.651251 8_4:+52506907 None:intergenic
AAATGTAAATGCAATTCGTG+AGG 0.653711 8_4:+52508098 None:intergenic
AGTGGTGGCTGATAGTTACA+TGG 0.656319 8_4:-52506663 Msa1332540:CDS
GTGCTCGAAGCTTCTCTAAG+GGG 0.657498 8_4:-52507435 Msa1332540:CDS
CCGTGTCCATCTCTGTCACG+AGG 0.657961 8_4:+52507355 None:intergenic
GGTGTCGAAATAGTAAGGAG+TGG 0.658621 8_4:+52507111 None:intergenic
GAGCTGAAAGATGCTACCAC+GGG 0.660749 8_4:+52506521 None:intergenic
TATTGGTTTCTTGTTCGGCG+GGG 0.662234 8_4:-52507051 Msa1332540:CDS
AGAGCTGAAAGATGCTACCA+CGG 0.662264 8_4:+52506520 None:intergenic
GCCGGCGTTTCACTTTACAG+TGG 0.663644 8_4:-52506908 Msa1332540:CDS
TTCGATAACGAACCGCTGCG+AGG 0.664252 8_4:+52507019 None:intergenic
CGTTATCGAATGTAGCTCCG+TGG 0.668641 8_4:-52507006 Msa1332540:CDS
TGACCCATAAGCCCATGGCG+TGG 0.671307 8_4:+52506090 None:intergenic
TAGAGGTGTAAACTCACGTG+TGG 0.673521 8_4:-52506759 Msa1332540:CDS
GGAATGGGAAACGAACCGGT+TGG 0.676396 8_4:-52506881 Msa1332540:CDS
GGGAATACTGGACCTCGCAG+CGG 0.677204 8_4:-52507031 Msa1332540:CDS
GCTCCGTGGATCATGACCGT+CGG 0.679466 8_4:-52506992 Msa1332540:CDS
GCTTGACAATGAGTTTCACA+TGG 0.684717 8_4:+52505966 None:intergenic
ATAGATCAAGCGATTCAAGA+CGG 0.687911 8_4:-52507172 Msa1332540:CDS
GGTAGCGTAACCAAGAAGAG+TGG 0.691209 8_4:+52507288 None:intergenic
TACGCTACCGGAACAGCACG+TGG 0.695241 8_4:-52507274 Msa1332540:CDS
GCGGCCAAGCCACTTATGTG+CGG 0.695902 8_4:+52506235 None:intergenic
GAACGTGAGACCTTCACCCG+TGG 0.697979 8_4:-52506537 Msa1332540:CDS
CTCACGTGTGGAGAAAGGCA+CGG 0.701275 8_4:-52506747 Msa1332540:CDS
ACGGTTGTGATTGACGCTGG+AGG 0.706420 8_4:-52506728 Msa1332540:CDS
CCTCGTGACAGAGATGGACA+CGG 0.713970 8_4:-52507355 Msa1332540:CDS
TATTCCTGCGAGTATGTCGG+AGG 0.715803 8_4:+52507192 None:intergenic
ACCGTTGTAAGAGTGAGTGT+AGG 0.715846 8_4:+52507777 None:intergenic
TTTGTGGCGTCACACCATTG+GGG 0.719539 8_4:+52506492 None:intergenic
GTCGGAGGCGAAACAACCGT+CGG 0.727526 8_4:+52507207 None:intergenic
GTGTTGTCACTCTCACTCGG+TGG 0.734561 8_4:-52507142 Msa1332540:CDS
AAGCAGACCCAGAAACTCTG+GGG 0.735187 8_4:+52507651 None:intergenic
ATGGGTAATTAAGATCACCA+GGG 0.759190 8_4:+52505909 None:intergenic
GATGATTCTTGCAAACACGG+CGG 0.761680 8_4:-52506699 Msa1332540:CDS
ATTCACAGTTATCCCCACCG+TGG 0.775304 8_4:+52505778 None:intergenic
ATGAGCCGCTTTCAACAACG+CGG 0.781377 8_4:+52506216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGCAATTGATTAATATT+CGG + chr8_4:52507168-52507187 None:intergenic 15.0%
!!! TTTTTAAATCAACTACAATA+GGG + chr8_4:52507936-52507955 None:intergenic 15.0%
!!! TTTTTTAAATCAACTACAAT+AGG + chr8_4:52507937-52507956 None:intergenic 15.0%
!!! AACTATGTAAGTTTTTTTGT+TGG + chr8_4:52505592-52505611 None:intergenic 20.0%
! AAACAAATTAAGAAAGCCTA+TGG - chr8_4:52505500-52505519 Msa1332540:three_prime_UTR 25.0%
! ATTATTATCTGCTACAGTAA+TGG - chr8_4:52505560-52505579 Msa1332540:three_prime_UTR 25.0%
! TTAAAATAAACCAAACCAAC+CGG + chr8_4:52506602-52506621 None:intergenic 25.0%
!!! GTTTGGTTTATTTTAACGAA+CGG - chr8_4:52506606-52506625 Msa1332540:CDS 25.0%
! TAATATTCGGTCTTACATAT+AGG + chr8_4:52507155-52507174 None:intergenic 25.0%
! CAAAAACAACAGAAAATGAT+GGG + chr8_4:52507577-52507596 None:intergenic 25.0%
! TTTATGATGTAGTTGTTAGT+GGG - chr8_4:52507660-52507679 Msa1332540:CDS 25.0%
!!! CAAAGATATTGTTGATGATT+CGG - chr8_4:52507775-52507794 Msa1332540:CDS 25.0%
AAATGTAAATGCAATTCGTG+AGG + chr8_4:52505370-52505389 None:intergenic 30.0%
TACAAGAAGATACAAAGTTG+AGG + chr8_4:52505535-52505554 None:intergenic 30.0%
CTCTGTAACAAAAAACTCAT+CGG - chr8_4:52506008-52506027 Msa1332540:CDS 30.0%
ACCAGACATGATATTGAATT+GGG + chr8_4:52507092-52507111 None:intergenic 30.0%
TACCAGACATGATATTGAAT+TGG + chr8_4:52507093-52507112 None:intergenic 30.0%
TAGGTAGAACAAGTAACATT+AGG + chr8_4:52507527-52507546 None:intergenic 30.0%
CCAAAAACAACAGAAAATGA+TGG + chr8_4:52507578-52507597 None:intergenic 30.0%
!!! CCATCATTTTCTGTTGTTTT+TGG - chr8_4:52507575-52507594 Msa1332540:CDS 30.0%
!!! GTTGTTTTTGGAAACAATAG+TGG - chr8_4:52507587-52507606 Msa1332540:CDS 30.0%
GTTTATGATGTAGTTGTTAG+TGG - chr8_4:52507659-52507678 Msa1332540:CDS 30.0%
TTGTCCATGTAAAAGCAATT+GGG + chr8_4:52507856-52507875 None:intergenic 30.0%
ATTGTCCATGTAAAAGCAAT+TGG + chr8_4:52507857-52507876 None:intergenic 30.0%
TGGACAATTCTATGAAGATT+TGG - chr8_4:52507869-52507888 Msa1332540:CDS 30.0%
AAACATACTCTAATCGTACT+TGG + chr8_4:52508129-52508148 None:intergenic 30.0%
TGCATTCTGATGTTATTGCT+TGG - chr8_4:52505469-52505488 Msa1332540:three_prime_UTR 35.0%
AAGATACAAAGTTGAGGTTG+AGG + chr8_4:52505529-52505548 None:intergenic 35.0%
GAAGAAGAAGATTGGAGAAT+GGG + chr8_4:52505651-52505670 None:intergenic 35.0%
AGAAGAAGAAGATTGGAGAA+TGG + chr8_4:52505652-52505671 None:intergenic 35.0%
GAGAATCAGAAGAAGAAGAT+TGG + chr8_4:52505659-52505678 None:intergenic 35.0%
TTGGTGAAGAAACTGAGAAT+GGG + chr8_4:52505850-52505869 None:intergenic 35.0%
TCATGAAAACTTTGCGATTC+TGG + chr8_4:52505918-52505937 None:intergenic 35.0%
ATAGATCAAGCGATTCAAGA+CGG - chr8_4:52506293-52506312 Msa1332540:intron 35.0%
!! AGGGATATTGGTTTCTTGTT+CGG - chr8_4:52506409-52506428 Msa1332540:CDS 35.0%
AAAGTGGTTGTATGTGATAG+AGG - chr8_4:52506689-52506708 Msa1332540:CDS 35.0%
! GATTAAAAAGTATGCAGCGT+TGG - chr8_4:52506862-52506881 Msa1332540:CDS 35.0%
!! ATTCTGAAGCCTGATGTTAT+TGG - chr8_4:52506995-52507014 Msa1332540:CDS 35.0%
!! TTCTGAAGCCTGATGTTATT+GGG - chr8_4:52506996-52507015 Msa1332540:CDS 35.0%
CAGTATCAGCATCATAAACA+AGG + chr8_4:52507436-52507455 None:intergenic 35.0%
ACTTGTTCTACCTATTTGTC+TGG - chr8_4:52507533-52507552 Msa1332540:CDS 35.0%
ATGGGTAATTAAGATCACCA+GGG + chr8_4:52507559-52507578 None:intergenic 35.0%
!!! TTTTTGAGCAAGTTGGTGAA+AGG - chr8_4:52507723-52507742 Msa1332540:CDS 35.0%
TGGTGAAAGGCAAACATATA+TGG - chr8_4:52507736-52507755 Msa1332540:CDS 35.0%
AAATCAACTACAATAGGGCT+AGG + chr8_4:52507931-52507950 None:intergenic 35.0%
ATGTTATGTCATAGACTGCT+AGG + chr8_4:52508095-52508114 None:intergenic 35.0%
ACCTACACTCACTCTTACAA+CGG - chr8_4:52505687-52505706 Msa1332540:CDS 40.0%
! TTGCACTTGTTGAGTGTCAA+GGG + chr8_4:52505724-52505743 None:intergenic 40.0%
!! CGTAGTTCTGATTCAGTTCT+AGG - chr8_4:52505750-52505769 Msa1332540:CDS 40.0%
! GTTGGTGAAGAAACTGAGAA+TGG + chr8_4:52505851-52505870 None:intergenic 40.0%
TAACTACGTCGTATGAAGGT+TGG + chr8_4:52505869-52505888 None:intergenic 40.0%
CCTTCATACGACGTAGTTAT+CGG - chr8_4:52505870-52505889 Msa1332540:CDS 40.0%
CAGAGTGAAGAATCGAAATC+TGG + chr8_4:52505993-52506012 None:intergenic 40.0%
ATCTATTCCTGCGAGTATGT+CGG + chr8_4:52506279-52506298 None:intergenic 40.0%
TATTTCGACACCATCGCAAT+CGG - chr8_4:52506365-52506384 Msa1332540:intron 40.0%
!! GATATTGGTTTCTTGTTCGG+CGG - chr8_4:52506412-52506431 Msa1332540:CDS 40.0%
!! ATATTGGTTTCTTGTTCGGC+GGG - chr8_4:52506413-52506432 Msa1332540:CDS 40.0%
GTTTCACTTTACAGTGGAGA+AGG - chr8_4:52506563-52506582 Msa1332540:CDS 40.0%
ACTTTACAGTGGAGAAGGAA+TGG - chr8_4:52506568-52506587 Msa1332540:CDS 40.0%
CTTTACAGTGGAGAAGGAAT+GGG - chr8_4:52506569-52506588 Msa1332540:CDS 40.0%
TCGAGTAGTATATGTATGCC+CGG - chr8_4:52506638-52506657 Msa1332540:CDS 40.0%
TGGGATGATTCTTGCAAACA+CGG - chr8_4:52506763-52506782 Msa1332540:CDS 40.0%
! AGCGTTGGATTCTAATCCAA+CGG - chr8_4:52506877-52506896 Msa1332540:CDS 40.0%
ACATCAGGCTTCAGAATTTG+TGG + chr8_4:52506992-52507011 None:intergenic 40.0%
GCCCAATTCAATATCATGTC+TGG - chr8_4:52507088-52507107 Msa1332540:CDS 40.0%
!! GTTACTGCGTTGATAACGTT+AGG - chr8_4:52507191-52507210 Msa1332540:CDS 40.0%
!! AGAGCTGATTTGATTGCACT+TGG + chr8_4:52507287-52507306 None:intergenic 40.0%
ATAAACAAGGCCAGGAGATA+AGG + chr8_4:52507423-52507442 None:intergenic 40.0%
GCTTGACAATGAGTTTCACA+TGG + chr8_4:52507502-52507521 None:intergenic 40.0%
GATGGGTAATTAAGATCACC+AGG + chr8_4:52507560-52507579 None:intergenic 40.0%
!! GTGGTGTTGTTCAATACAAG+CGG - chr8_4:52507606-52507625 Msa1332540:CDS 40.0%
! AACTTGCTCAAAAACCAGCT+TGG + chr8_4:52507717-52507736 None:intergenic 40.0%
!!! AAGCTGGTTTTTGAGCAAGT+TGG - chr8_4:52507716-52507735 Msa1332540:CDS 40.0%
! GATTCGGTTACGTCTGAATT+TGG - chr8_4:52507791-52507810 Msa1332540:CDS 40.0%
CTGAATTTGGCAGTATTACG+TGG - chr8_4:52507804-52507823 Msa1332540:CDS 40.0%
GCAACAAACAACACCAAGTT+AGG - chr8_4:52507828-52507847 Msa1332540:CDS 40.0%
TGGGATGTTGATGTTGCAAA+GGG - chr8_4:52507995-52508014 Msa1332540:CDS 40.0%
! TTGGAGAATGGGAGAGTACA+TGG + chr8_4:52505640-52505659 None:intergenic 45.0%
ACCGTTGTAAGAGTGAGTGT+AGG + chr8_4:52505691-52505710 None:intergenic 45.0%
! CTTGCACTTGTTGAGTGTCA+AGG + chr8_4:52505725-52505744 None:intergenic 45.0%
CCGATAACTACGTCGTATGA+AGG + chr8_4:52505873-52505892 None:intergenic 45.0%
GTTATCGGTGTACTTGACAC+TGG - chr8_4:52505885-52505904 Msa1332540:CDS 45.0%
GTGTACTTGACACTGGAGTA+TGG - chr8_4:52505892-52505911 Msa1332540:CDS 45.0%
!! CTTCTCTAAGGGGTATCTCA+TGG - chr8_4:52506040-52506059 Msa1332540:CDS 45.0%
TCTCTGTCACGAGGTGAAAT+AGG + chr8_4:52506104-52506123 None:intergenic 45.0%
ATTTCACCTCGTGACAGAGA+TGG - chr8_4:52506104-52506123 Msa1332540:CDS 45.0%
AAGAAGAGTGGCGTTAGCTA+CGG + chr8_4:52506168-52506187 None:intergenic 45.0%
ACTCTTCTTGGTTACGCTAC+CGG - chr8_4:52506179-52506198 Msa1332540:CDS 45.0%
GATGTGTTGTCACTCTCACT+CGG - chr8_4:52506320-52506339 Msa1332540:intron 45.0%
! GGTGTCGAAATAGTAAGGAG+TGG + chr8_4:52506357-52506376 None:intergenic 45.0%
! GCGATGGTGTCGAAATAGTA+AGG + chr8_4:52506362-52506381 None:intergenic 45.0%
!! TATTGGTTTCTTGTTCGGCG+GGG - chr8_4:52506414-52506433 Msa1332540:CDS 45.0%
! GACTTTGGATCGGGATTTTC+CGG - chr8_4:52506502-52506521 Msa1332540:CDS 45.0%
TCCACTGTAAAGTGAAACGC+CGG + chr8_4:52506561-52506580 None:intergenic 45.0%
AGAAGGAATGGGAAACGAAC+CGG - chr8_4:52506580-52506599 Msa1332540:CDS 45.0%
! TAGAGGTGTAAACTCACGTG+TGG - chr8_4:52506706-52506725 Msa1332540:CDS 45.0%
GTAAACTCACGTGTGGAGAA+AGG - chr8_4:52506713-52506732 Msa1332540:CDS 45.0%
GATGATTCTTGCAAACACGG+CGG - chr8_4:52506766-52506785 Msa1332540:CDS 45.0%
AGTGGTGGCTGATAGTTACA+TGG - chr8_4:52506802-52506821 Msa1332540:CDS 45.0%
GGCTGATAGTTACATGGTAC+CGG - chr8_4:52506808-52506827 Msa1332540:CDS 45.0%
!!! CTCGTTTTTTCCCACCGAAA+CGG + chr8_4:52506834-52506853 None:intergenic 45.0%
GTTTCGGTGGGAAAAAACGA+GGG - chr8_4:52506833-52506852 Msa1332540:CDS 45.0%
AGAGCTGAAAGATGCTACCA+CGG + chr8_4:52506948-52506967 None:intergenic 45.0%
ATTTGTGGCGTCACACCATT+GGG + chr8_4:52506977-52506996 None:intergenic 45.0%
AATTTGTGGCGTCACACCAT+TGG + chr8_4:52506978-52506997 None:intergenic 45.0%
ATGTCATGTCCGCACATAAG+TGG - chr8_4:52507221-52507240 Msa1332540:CDS 45.0%
ATTGCACTTGGACTCCATTC+TGG + chr8_4:52507275-52507294 None:intergenic 45.0%
ACAACACAGAGTCTCCCTTA+AGG - chr8_4:52507330-52507349 Msa1332540:CDS 45.0%
CAACACAGAGTCTCCCTTAA+GGG - chr8_4:52507331-52507350 Msa1332540:CDS 45.0%
TCTCCCTTAAGGGATGCAAT+GGG - chr8_4:52507341-52507360 Msa1332540:CDS 45.0%
TCTCCCATTGCATCCCTTAA+GGG + chr8_4:52507347-52507366 None:intergenic 45.0%
AGGTCATGTCAACCCTCAAA+AGG - chr8_4:52507397-52507416 Msa1332540:CDS 45.0%
! CAGGAGATAAGGCCTTTTGA+GGG + chr8_4:52507412-52507431 None:intergenic 45.0%
TCAGCATCATAAACAAGGCC+AGG + chr8_4:52507431-52507450 None:intergenic 45.0%
AAGCGGACACTTACTAACGT+TGG - chr8_4:52507623-52507642 Msa1332540:CDS 45.0%
AGCGGACACTTACTAACGTT+GGG - chr8_4:52507624-52507643 Msa1332540:CDS 45.0%
AACTGTGAATCCTACCAAGC+TGG - chr8_4:52507700-52507719 Msa1332540:CDS 45.0%
TGCTCAAAAACCAGCTTGGT+AGG + chr8_4:52507713-52507732 None:intergenic 45.0%
AAGCAATTGGGCTCCTAACT+TGG + chr8_4:52507844-52507863 None:intergenic 45.0%
!! GGAGCCCAATTGCTTTTACA+TGG - chr8_4:52507849-52507868 Msa1332540:CDS 45.0%
GAAAGAAAGCAGCAGCTGTT+TGG - chr8_4:52507967-52507986 Msa1332540:CDS 45.0%
GTGGGATGTTGATGTTGCAA+AGG - chr8_4:52507994-52508013 Msa1332540:CDS 45.0%
GTTGAGGTTGAGGATGCCAT+AGG + chr8_4:52505519-52505538 None:intergenic 50.0%
AAGCAGACCCAGAAACTCTG+GGG + chr8_4:52505817-52505836 None:intergenic 50.0%
GAAGCAGACCCAGAAACTCT+GGG + chr8_4:52505818-52505837 None:intergenic 50.0%
TGAAGCAGACCCAGAAACTC+TGG + chr8_4:52505819-52505838 None:intergenic 50.0%
TGCCTCAAATCCCATCTCGA+TGG - chr8_4:52505946-52505965 Msa1332540:CDS 50.0%
ACTTTCCACGCCATCGAGAT+GGG + chr8_4:52505959-52505978 None:intergenic 50.0%
GGTGCTCGAAGCTTCTCTAA+GGG - chr8_4:52506029-52506048 Msa1332540:CDS 50.0%
GTGCTCGAAGCTTCTCTAAG+GGG - chr8_4:52506030-52506049 Msa1332540:CDS 50.0%
TATCTCATGGCATCTCCTGG+TGG - chr8_4:52506053-52506072 Msa1332540:CDS 50.0%
TTCTTTCTACCACCACCACC+AGG + chr8_4:52506071-52506090 None:intergenic 50.0%
GTAGCTAACGCCACTCTTCT+TGG - chr8_4:52506167-52506186 Msa1332540:CDS 50.0%
GGTAGCGTAACCAAGAAGAG+TGG + chr8_4:52506180-52506199 None:intergenic 50.0%
TAAACAGCGATACGTGCCTG+TGG + chr8_4:52506224-52506243 None:intergenic 50.0%
GGCACGTATCGCTGTTTACA+AGG - chr8_4:52506226-52506245 Msa1332540:CDS 50.0%
TCGCTGTTTACAAGGTCTGC+TGG - chr8_4:52506234-52506253 Msa1332540:CDS 50.0%
TATTCCTGCGAGTATGTCGG+AGG + chr8_4:52506276-52506295 None:intergenic 50.0%
! CATCGCAATCGGAGCTTTTG+CGG - chr8_4:52506376-52506395 Msa1332540:intron 50.0%
CGTTATCGAATGTAGCTCCG+TGG - chr8_4:52506459-52506478 Msa1332540:CDS 50.0%
TTTCCGGCTTACGCTACTCT+CGG - chr8_4:52506518-52506537 Msa1332540:CDS 50.0%
TTTCCGAGAGTAGCGTAAGC+CGG + chr8_4:52506524-52506543 None:intergenic 50.0%
GCTTACGCTACTCTCGGAAA+CGG - chr8_4:52506524-52506543 Msa1332540:CDS 50.0%
GGAAACGGAATACGTTTCGC+CGG - chr8_4:52506539-52506558 Msa1332540:CDS 50.0%
TATGCCCGGTTCACTTGACT+CGG - chr8_4:52506652-52506671 Msa1332540:CDS 50.0%
ATTGCCGAGTCAAGTGAACC+GGG + chr8_4:52506659-52506678 None:intergenic 50.0%
GATTGCCGAGTCAAGTGAAC+CGG + chr8_4:52506660-52506679 None:intergenic 50.0%
!! TGATTGACGCTGGAGGTGTT+GGG - chr8_4:52506744-52506763 Msa1332540:CDS 50.0%
!! TTACATGGTACCGGCCGTTT+CGG - chr8_4:52506817-52506836 Msa1332540:CDS 50.0%
!!! TTTTTTCCCACCGAAACGGC+CGG + chr8_4:52506830-52506849 None:intergenic 50.0%
CGTTTCGGTGGGAAAAAACG+AGG - chr8_4:52506832-52506851 Msa1332540:CDS 50.0%
CCAACGGCTGTGCTTAGTTT+CGG - chr8_4:52506893-52506912 Msa1332540:CDS 50.0%
AAAGATGCTACCACGGGTGA+AGG + chr8_4:52506941-52506960 None:intergenic 50.0%
GAGCTGAAAGATGCTACCAC+GGG + chr8_4:52506947-52506966 None:intergenic 50.0%
GTAGCATCTTTCAGCTCTCG+TGG - chr8_4:52506950-52506969 Msa1332540:CDS 50.0%
TTTGTGGCGTCACACCATTG+GGG + chr8_4:52506976-52506995 None:intergenic 50.0%
AAGCCTGATGTTATTGGGCC+TGG - chr8_4:52507001-52507020 Msa1332540:CDS 50.0%
AACATCTTAGCGGGATGGAC+CGG - chr8_4:52507028-52507047 Msa1332540:CDS 50.0%
ATGTCCGCACATAAGTGGCT+TGG - chr8_4:52507226-52507245 Msa1332540:CDS 50.0%
! ATGAGCCGCTTTCAACAACG+CGG + chr8_4:52507252-52507271 None:intergenic 50.0%
TGAAAGCGGCTCATCCAGAA+TGG - chr8_4:52507258-52507277 Msa1332540:CDS 50.0%
GTCTCCCTTAAGGGATGCAA+TGG - chr8_4:52507340-52507359 Msa1332540:CDS 50.0%
CTCTCCCATTGCATCCCTTA+AGG + chr8_4:52507348-52507367 None:intergenic 50.0%
CTTAAGGGATGCAATGGGAG+AGG - chr8_4:52507346-52507365 Msa1332540:CDS 50.0%
! CCAGGAGATAAGGCCTTTTG+AGG + chr8_4:52507413-52507432 None:intergenic 50.0%
! CCTCAAAAGGCCTTATCTCC+TGG - chr8_4:52507410-52507429 Msa1332540:CDS 50.0%
TCTACCTATTTGTCTGGCCC+TGG - chr8_4:52507539-52507558 Msa1332540:CDS 50.0%
ATCACCAGGGCCAGACAAAT+AGG + chr8_4:52507546-52507565 None:intergenic 50.0%
GCGGACACTTACTAACGTTG+GGG - chr8_4:52507625-52507644 Msa1332540:CDS 50.0%
! AGTTGTTAGTGGGCCATCCA+CGG - chr8_4:52507670-52507689 Msa1332540:CDS 50.0%
ATTCACAGTTATCCCCACCG+TGG + chr8_4:52507690-52507709 None:intergenic 50.0%
AGGGCTAGGCTACTGCTATT+GGG + chr8_4:52507917-52507936 None:intergenic 50.0%
TAGGGCTAGGCTACTGCTAT+TGG + chr8_4:52507918-52507937 None:intergenic 50.0%
CGCCATCGAGATGGGATTTG+AGG + chr8_4:52505951-52505970 None:intergenic 55.0%
CAAATCCCATCTCGATGGCG+TGG - chr8_4:52505951-52505970 Msa1332540:CDS 55.0%
CACTTTCCACGCCATCGAGA+TGG + chr8_4:52505960-52505979 None:intergenic 55.0%
CGGTGCTCGAAGCTTCTCTA+AGG - chr8_4:52506028-52506047 Msa1332540:CDS 55.0%
GGGTATCTCATGGCATCTCC+TGG - chr8_4:52506050-52506069 Msa1332540:CDS 55.0%
CCTCGTGACAGAGATGGACA+CGG - chr8_4:52506110-52506129 Msa1332540:CDS 55.0%
AAGAGTGGCGTTAGCTACGG+CGG + chr8_4:52506165-52506184 None:intergenic 55.0%
TACCGGAACAGCACGTGGTA+TGG - chr8_4:52506196-52506215 Msa1332540:CDS 55.0%
! AGCCATACCACGTGCTGTTC+CGG + chr8_4:52506201-52506220 None:intergenic 55.0%
TACAAGGTCTGCTGGACCGA+CGG - chr8_4:52506242-52506261 Msa1332540:CDS 55.0%
GTGTTGTCACTCTCACTCGG+TGG - chr8_4:52506323-52506342 Msa1332540:intron 55.0%
CGCAAAAGCTCCGATTGCGA+TGG + chr8_4:52506378-52506397 None:intergenic 55.0%
TCTTGTTCGGCGGGGAATAC+TGG - chr8_4:52506422-52506441 Msa1332540:CDS 55.0%
TTCGATAACGAACCGCTGCG+AGG + chr8_4:52506449-52506468 None:intergenic 55.0%
ATCCAAAGTCCCTGCTCCGA+CGG + chr8_4:52506492-52506511 None:intergenic 55.0%
TCGGAGCAGGGACTTTGGAT+CGG - chr8_4:52506492-52506511 Msa1332540:CDS 55.0%
GCCGGCGTTTCACTTTACAG+TGG - chr8_4:52506557-52506576 Msa1332540:CDS 55.0%
GGAATGGGAAACGAACCGGT+TGG - chr8_4:52506584-52506603 Msa1332540:CDS 55.0%
! GGGAAACGAACCGGTTGGTT+TGG - chr8_4:52506589-52506608 Msa1332540:CDS 55.0%
CTCACGTGTGGAGAAAGGCA+CGG - chr8_4:52506718-52506737 Msa1332540:CDS 55.0%
ACGGTTGTGATTGACGCTGG+AGG - chr8_4:52506737-52506756 Msa1332540:CDS 55.0%
! GTGATTGACGCTGGAGGTGT+TGG - chr8_4:52506743-52506762 Msa1332540:CDS 55.0%
CCGAAACTAAGCACAGCCGT+TGG + chr8_4:52506896-52506915 None:intergenic 55.0%
ACGGCTGTGCTTAGTTTCGG+TGG - chr8_4:52506896-52506915 Msa1332540:CDS 55.0%
ACGCCAGGCCCAATAACATC+AGG + chr8_4:52507007-52507026 None:intergenic 55.0%
GCCTGGCGTGAACATCTTAG+CGG - chr8_4:52507018-52507037 Msa1332540:CDS 55.0%
CCTGGCGTGAACATCTTAGC+GGG - chr8_4:52507019-52507038 Msa1332540:CDS 55.0%
GCGTGAACATCTTAGCGGGA+TGG - chr8_4:52507023-52507042 Msa1332540:CDS 55.0%
CTTCGGGCTCACAAGACACT+CGG - chr8_4:52507062-52507081 Msa1332540:CDS 55.0%
CTTGGCCGCGTTGTTGAAAG+CGG - chr8_4:52507244-52507263 Msa1332540:CDS 55.0%
ATAAGCCCATGGCGTGGACA+AGG + chr8_4:52507372-52507391 None:intergenic 55.0%
TTGTCCACGCCATGGGCTTA+TGG - chr8_4:52507371-52507390 Msa1332540:CDS 55.0%
TGTCCACGCCATGGGCTTAT+GGG - chr8_4:52507372-52507391 Msa1332540:CDS 55.0%
TGACCTGACCCATAAGCCCA+TGG + chr8_4:52507383-52507402 None:intergenic 55.0%
ACAGTTATCCCCACCGTGGA+TGG + chr8_4:52507686-52507705 None:intergenic 55.0%
! CAGCAGCTGTTTGGAGCTGT+GGG - chr8_4:52507976-52507995 Msa1332540:CDS 55.0%
TACCCGCACCCCAGAGTTTC+TGG - chr8_4:52505806-52505825 Msa1332540:CDS 60.0%
ACCCGCACCCCAGAGTTTCT+GGG - chr8_4:52505807-52505826 Msa1332540:CDS 60.0%
!! ACCCAGAAACTCTGGGGTGC+GGG + chr8_4:52505811-52505830 None:intergenic 60.0%
!! GACCCAGAAACTCTGGGGTG+CGG + chr8_4:52505812-52505831 None:intergenic 60.0%
CTCATGGCATCTCCTGGTGG+TGG - chr8_4:52506056-52506075 Msa1332540:CDS 60.0%
!! ATGGCATCTCCTGGTGGTGG+TGG - chr8_4:52506059-52506078 Msa1332540:CDS 60.0%
CCGTGTCCATCTCTGTCACG+AGG + chr8_4:52506113-52506132 None:intergenic 60.0%
! AGCAGCGGTGGTGGCAGTAT+GGG + chr8_4:52506138-52506157 None:intergenic 60.0%
TACGCTACCGGAACAGCACG+TGG - chr8_4:52506191-52506210 Msa1332540:CDS 60.0%
AGCACGTGGTATGGCTCCAC+AGG - chr8_4:52506205-52506224 Msa1332540:CDS 60.0%
GTCGGAGGCGAAACAACCGT+CGG + chr8_4:52506261-52506280 None:intergenic 60.0%
TTCGCCTCCGACATACTCGC+AGG - chr8_4:52506269-52506288 Msa1332540:intron 60.0%
! CGCAATCGGAGCTTTTGCGG+CGG - chr8_4:52506379-52506398 Msa1332540:CDS 60.0%
! AATCGGAGCTTTTGCGGCGG+TGG - chr8_4:52506382-52506401 Msa1332540:CDS 60.0%
! CTTTTGCGGCGGTGGAGAGA+GGG - chr8_4:52506390-52506409 Msa1332540:CDS 60.0%
GGCGGTGGAGAGAGGGATAT+TGG - chr8_4:52506397-52506416 Msa1332540:CDS 60.0%
GGGAATACTGGACCTCGCAG+CGG - chr8_4:52506434-52506453 Msa1332540:CDS 60.0%
GCTCCGTGGATCATGACCGT+CGG - chr8_4:52506473-52506492 Msa1332540:CDS 60.0%
GCTCCGACGGTCATGATCCA+CGG + chr8_4:52506479-52506498 None:intergenic 60.0%
TGGATCATGACCGTCGGAGC+AGG - chr8_4:52506479-52506498 Msa1332540:CDS 60.0%
GGATCATGACCGTCGGAGCA+GGG - chr8_4:52506480-52506499 Msa1332540:CDS 60.0%
CGGAGCAGGGACTTTGGATC+GGG - chr8_4:52506493-52506512 Msa1332540:CDS 60.0%
!! CTTGACTCGGCAATCGTGCG+CGG - chr8_4:52506665-52506684 Msa1332540:CDS 60.0%
!! TTGACTCGGCAATCGTGCGC+GGG - chr8_4:52506666-52506685 Msa1332540:CDS 60.0%
GGCACGGTTGTGATTGACGC+TGG - chr8_4:52506734-52506753 Msa1332540:CDS 60.0%
!! ATGGTACCGGCCGTTTCGGT+GGG - chr8_4:52506821-52506840 Msa1332540:CDS 60.0%
GAACGTGAGACCTTCACCCG+TGG - chr8_4:52506928-52506947 Msa1332540:CDS 60.0%
TTCAGCTCTCGTGGCCCCAA+TGG - chr8_4:52506959-52506978 Msa1332540:CDS 60.0%
CCCGCTAAGATGTTCACGCC+AGG + chr8_4:52507022-52507041 None:intergenic 60.0%
CGAGTGTCTTGTGAGCCCGA+AGG + chr8_4:52507064-52507083 None:intergenic 60.0%
GCGGCCAAGCCACTTATGTG+CGG + chr8_4:52507233-52507252 None:intergenic 60.0%
! AGAGGCCTTGTCCACGCCAT+GGG - chr8_4:52507364-52507383 Msa1332540:CDS 60.0%
TGACCCATAAGCCCATGGCG+TGG + chr8_4:52507378-52507397 None:intergenic 60.0%
ACGCCATGGGCTTATGGGTC+AGG - chr8_4:52507377-52507396 Msa1332540:CDS 60.0%
! TGTTAGTGGGCCATCCACGG+TGG - chr8_4:52507673-52507692 Msa1332540:CDS 60.0%
! GTTAGTGGGCCATCCACGGT+GGG - chr8_4:52507674-52507693 Msa1332540:CDS 60.0%
! TTAGTGGGCCATCCACGGTG+GGG - chr8_4:52507675-52507694 Msa1332540:CDS 60.0%
! GCAGCAGCTGTTTGGAGCTG+TGG - chr8_4:52507975-52507994 Msa1332540:CDS 60.0%
! CAGCAGCGGTGGTGGCAGTA+TGG + chr8_4:52506139-52506158 None:intergenic 65.0%
CATACTGCCACCACCGCTGC+TGG - chr8_4:52506137-52506156 Msa1332540:CDS 65.0%
! GCTTTTGCGGCGGTGGAGAG+AGG - chr8_4:52506389-52506408 Msa1332540:CDS 65.0%
GACCGTCGGAGCAGGGACTT+TGG - chr8_4:52506487-52506506 Msa1332540:CDS 65.0%
GGCAATCGTGCGCGGGAAAG+TGG - chr8_4:52506673-52506692 Msa1332540:CDS 65.0%
CTTGCAAACACGGCGGCGAG+CGG - chr8_4:52506773-52506792 Msa1332540:CDS 65.0%
!! CATGGTACCGGCCGTTTCGG+TGG - chr8_4:52506820-52506839 Msa1332540:CDS 65.0%
! GAGAGGCCTTGTCCACGCCA+TGG - chr8_4:52507363-52507382 Msa1332540:CDS 65.0%
AGCTACGGCGGAGCCAGCAG+CGG + chr8_4:52506153-52506172 None:intergenic 70.0%
AACACGGCGGCGAGCGGTGA+AGG - chr8_4:52506779-52506798 Msa1332540:CDS 70.0%
GGCGAGCGGTGAAGGAGTGG+TGG - chr8_4:52506787-52506806 Msa1332540:CDS 70.0%
CGGGATGGACCGGCGCTGTT+GGG - chr8_4:52507038-52507057 Msa1332540:CDS 70.0%
GACCGGCGCTGTTGGGCCTT+CGG - chr8_4:52507045-52507064 Msa1332540:CDS 70.0%
ACCGGCGCTGTTGGGCCTTC+GGG - chr8_4:52507046-52507065 Msa1332540:CDS 70.0%
TACGGCGGAGCCAGCAGCGG+TGG + chr8_4:52506150-52506169 None:intergenic 75.0%
GGCGGCGAGCGGTGAAGGAG+TGG - chr8_4:52506784-52506803 Msa1332540:CDS 75.0%
GCGGGATGGACCGGCGCTGT+TGG - chr8_4:52507037-52507056 Msa1332540:CDS 75.0%
GCCCGAAGGCCCAACAGCGC+CGG + chr8_4:52507050-52507069 None:intergenic 75.0%
! GGCGGAGCCAGCAGCGGTGG+TGG + chr8_4:52506147-52506166 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52505336 52508151 52505336 ID=Msa1332540;Name=Msa1332540
chr8_4 mRNA 52505336 52508151 52505336 ID=Msa1332540-mRNA-1;Parent=Msa1332540;Name=Msa1332540-mRNA-1;_AED=0.01;_eAED=0.01;_QI=3|1|1|1|1|1|2|268|813
chr8_4 exon 52505336 52506274 52505336 ID=Msa1332540-mRNA-1:exon:15808;Parent=Msa1332540-mRNA-1
chr8_4 exon 52506378 52508151 52506378 ID=Msa1332540-mRNA-1:exon:15807;Parent=Msa1332540-mRNA-1
chr8_4 five_prime_UTR 52508149 52508151 52508149 ID=Msa1332540-mRNA-1:five_prime_utr;Parent=Msa1332540-mRNA-1
chr8_4 CDS 52506378 52508148 52506378 ID=Msa1332540-mRNA-1:cds;Parent=Msa1332540-mRNA-1
chr8_4 CDS 52505604 52506274 52505604 ID=Msa1332540-mRNA-1:cds;Parent=Msa1332540-mRNA-1
chr8_4 three_prime_UTR 52505336 52505603 52505336 ID=Msa1332540-mRNA-1:three_prime_utr;Parent=Msa1332540-mRNA-1
Gene Sequence

>Msa1332540

ATGATAATTGATAAGAATGAAATTGATTCCTCACGAATTGCATTTACATTTGCTTCTTCTCTTCTTTCATTTCAATTTTCATATACAATCATTCATATTATAAACATTAACATTAATATTGCACTGTCAGTGCATTCTGATGTTATTGCTTGGTTAAAGAAAAACAAATTAAGAAAGCCTATGGCATCCTCAACCTCAACTTTGTATCTTCTTGTAATGCTATTATTATCTGCTACAGTAATGGCATTGACCAACAAAAAAACTTACATAGTTCACATGAAACACAACAAAAATGCATCCATGTACTCTCCCATTCTCCAATCTTCTTCTTCTGATTCTCTACTTTACACCTACACTCACTCTTACAACGGTTTTGCTGCTTCCCTTGACACTCAACAAGTGCAAGCACTGCGTAGTTCTGATTCAGTTCTAGGTGTATATGAAGATACTCTGTACTCGCTGCACACTACCCGCACCCCAGAGTTTCTGGGTCTGCTTCAAATTCAAACCCATTCTCAGTTTCTTCACCAACCTTCATACGACGTAGTTATCGGTGTACTTGACACTGGAGTATGGCCAGAATCGCAAAGTTTTCATGATTCTCAAATGCCTCAAATCCCATCTCGATGGCGTGGAAAGTGTGAATCAGCACCAGATTTCGATTCTTCACTCTGTAACAAAAAACTCATCGGTGCTCGAAGCTTCTCTAAGGGGTATCTCATGGCATCTCCTGGTGGTGGTGGTAGAAAGAAAGCAGTTGATCCTATTTCACCTCGTGACAGAGATGGACACGGTACCCATACTGCCACCACCGCTGCTGGCTCCGCCGTAGCTAACGCCACTCTTCTTGGTTACGCTACCGGAACAGCACGTGGTATGGCTCCACAGGCACGTATCGCTGTTTACAAGGTCTGCTGGACCGACGGTTGTTTCGCCTCCGACATACTCGCAGGAATAGATCAAGCGATTCAAGACGGTGTTGATGTGTTGTCACTCTCACTCGGTGGTTCATCATCCACTCCTTACTATTTCGACACCATCGCAATCGGAGCTTTTGCGGCGGTGGAGAGAGGGATATTGGTTTCTTGTTCGGCGGGGAATACTGGACCTCGCAGCGGTTCGTTATCGAATGTAGCTCCGTGGATCATGACCGTCGGAGCAGGGACTTTGGATCGGGATTTTCCGGCTTACGCTACTCTCGGAAACGGAATACGTTTCGCCGGCGTTTCACTTTACAGTGGAGAAGGAATGGGAAACGAACCGGTTGGTTTGGTTTATTTTAACGAACGGTTTAATTCATCGAGTAGTATATGTATGCCCGGTTCACTTGACTCGGCAATCGTGCGCGGGAAAGTGGTTGTATGTGATAGAGGTGTAAACTCACGTGTGGAGAAAGGCACGGTTGTGATTGACGCTGGAGGTGTTGGGATGATTCTTGCAAACACGGCGGCGAGCGGTGAAGGAGTGGTGGCTGATAGTTACATGGTACCGGCCGTTTCGGTGGGAAAAAACGAGGGTGATGAGATTAAAAAGTATGCAGCGTTGGATTCTAATCCAACGGCTGTGCTTAGTTTCGGTGGAACTGTGTTGAACGTGAGACCTTCACCCGTGGTAGCATCTTTCAGCTCTCGTGGCCCCAATGGTGTGACGCCACAAATTCTGAAGCCTGATGTTATTGGGCCTGGCGTGAACATCTTAGCGGGATGGACCGGCGCTGTTGGGCCTTCGGGCTCACAAGACACTCGGAAAGCCCAATTCAATATCATGTCTGGAACGTCGATGTCATGTCCGCACATAAGTGGCTTGGCCGCGTTGTTGAAAGCGGCTCATCCAGAATGGAGTCCAAGTGCAATCAAATCAGCTCTGATGACAACAGCTTATACACTTGACAACACAGAGTCTCCCTTAAGGGATGCAATGGGAGAGGCCTTGTCCACGCCATGGGCTTATGGGTCAGGTCATGTCAACCCTCAAAAGGCCTTATCTCCTGGCCTTGTTTATGATGCTGATACTGAAGACTACATTGCATTCTTATGCTCTCTGAACTACACACTTGACCATGTGAAACTCATTGTCAAGCGTCCTAATGTTACTTGTTCTACCTATTTGTCTGGCCCTGGTGATCTTAATTACCCATCATTTTCTGTTGTTTTTGGAAACAATAGTGGTGTTGTTCAATACAAGCGGACACTTACTAACGTTGGGGAAGCAGAATCTGTTTATGATGTAGTTGTTAGTGGGCCATCCACGGTGGGGATAACTGTGAATCCTACCAAGCTGGTTTTTGAGCAAGTTGGTGAAAGGCAAACATATATGGTTAAGTTTATATCAAACAAAGATATTGTTGATGATTCGGTTACGTCTGAATTTGGCAGTATTACGTGGAGCAACAAACAACACCAAGTTAGGAGCCCAATTGCTTTTACATGGACAATTCTATGA
Protein sequence

>Msa1332540

MIIDKNEIDSSRIAFTFASSLLSFQFSYTIIHIINININIALSVHSDVIAWLKKNKLRKPMASSTSTLYLLVMLLLSATVMALTNKKTYIVHMKHNKNASMYSPILQSSSSDSLLYTYTHSYNGFAASLDTQQVQALRSSDSVLGVYEDTLYSLHTTRTPEFLGLLQIQTHSQFLHQPSYDVVIGVLDTGVWPESQSFHDSQMPQIPSRWRGKCESAPDFDSSLCNKKLIGARSFSKGYLMASPGGGGRKKAVDPISPRDRDGHGTHTATTAAGSAVANATLLGYATGTARGMAPQARIAVYKVCWTDGCFASDILAGIDQAIQDGVDVLSLSLGGSSSTPYYFDTIAIGAFAAVERGILVSCSAGNTGPRSGSLSNVAPWIMTVGAGTLDRDFPAYATLGNGIRFAGVSLYSGEGMGNEPVGLVYFNERFNSSSSICMPGSLDSAIVRGKVVVCDRGVNSRVEKGTVVIDAGGVGMILANTAASGEGVVADSYMVPAVSVGKNEGDEIKKYAALDSNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDVIGPGVNILAGWTGAVGPSGSQDTRKAQFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTLDNTESPLRDAMGEALSTPWAYGSGHVNPQKALSPGLVYDADTEDYIAFLCSLNYTLDHVKLIVKRPNVTCSTYLSGPGDLNYPSFSVVFGNNSGVVQYKRTLTNVGEAESVYDVVVSGPSTVGITVNPTKLVFEQVGERQTYMVKFISNKDIVDDSVTSEFGSITWSNKQHQVRSPIAFTWTIL*