Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220860 | XP_013458443.1 | 87.591 | 137 | 17 | 0 | 1 | 137 | 1 | 137 | 6.19e-85 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0662520 | Msa1220860 | 0.887304 | 1.605301e-72 | -8.615850e-47 |
| Msa1220860 | Msa1404270 | 0.870678 | 1.217321e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220860 | MtrunA17_Chr4g0070831 | 87.591 | 137 | 17 | 0 | 1 | 137 | 1 | 137 | 5.69e-89 | 255 |
| Msa1220860 | MtrunA17_Chr8g0343111 | 66.279 | 86 | 29 | 0 | 51 | 136 | 8 | 93 | 4.00e-30 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220860 | AT4G26060.1 | 57.391 | 115 | 47 | 1 | 18 | 132 | 14 | 126 | 1.86e-44 | 142 |
| Msa1220860 | AT5G57060.7 | 48.837 | 129 | 61 | 2 | 7 | 132 | 1 | 127 | 9.06e-40 | 130 |
| Msa1220860 | AT5G57060.4 | 48.837 | 129 | 61 | 2 | 7 | 132 | 1 | 127 | 9.06e-40 | 130 |
| Msa1220860 | AT5G57060.9 | 48.837 | 129 | 61 | 2 | 7 | 132 | 1 | 127 | 9.06e-40 | 130 |
| Msa1220860 | AT5G57060.5 | 48.837 | 129 | 61 | 2 | 7 | 132 | 1 | 127 | 9.06e-40 | 130 |
| Msa1220860 | AT5G57060.1 | 48.837 | 129 | 61 | 2 | 7 | 132 | 1 | 127 | 9.06e-40 | 130 |
| Msa1220860 | AT5G57060.8 | 63.636 | 88 | 32 | 0 | 45 | 132 | 13 | 100 | 4.00e-39 | 128 |
| Msa1220860 | AT5G57060.2 | 63.636 | 88 | 32 | 0 | 45 | 132 | 13 | 100 | 4.00e-39 | 128 |
| Msa1220860 | AT5G57060.3 | 51.724 | 116 | 54 | 1 | 17 | 132 | 23 | 136 | 4.25e-39 | 129 |
| Msa1220860 | AT5G57060.6 | 51.724 | 116 | 54 | 1 | 17 | 132 | 23 | 136 | 4.25e-39 | 129 |
| Msa1220860 | AT1G54217.8 | 52.083 | 96 | 45 | 1 | 42 | 136 | 2 | 97 | 5.92e-23 | 87.0 |
| Msa1220860 | AT1G54217.2 | 52.083 | 96 | 45 | 1 | 42 | 136 | 2 | 97 | 5.92e-23 | 87.0 |
| Msa1220860 | AT1G54217.6 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
| Msa1220860 | AT1G54217.1 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
| Msa1220860 | AT1G54217.4 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
| Msa1220860 | AT1G54217.7 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
| Msa1220860 | AT1G54217.5 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
| Msa1220860 | AT1G54217.3 | 56.322 | 87 | 37 | 1 | 51 | 136 | 10 | 96 | 1.14e-22 | 86.3 |
Find 54 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCAACAATTCTCTATTT+TGG | 0.056794 | 8_1:+84235930 | Msa1220860:CDS |
| CCCCAGGGAACGGGCGGGGC+TGG | 0.245034 | 8_1:+84235971 | Msa1220860:CDS |
| TCCCAGCCCCGCCCGTTCCC+TGG | 0.253175 | 8_1:-84235973 | None:intergenic |
| CCCAGCCCCGCCCGTTCCCT+GGG | 0.307231 | 8_1:-84235972 | None:intergenic |
| CCCAGGGAACGGGCGGGGCT+GGG | 0.312102 | 8_1:+84235972 | Msa1220860:CDS |
| CCATGCTTTGGATGCGGAAT+TGG | 0.323771 | 8_1:+84235775 | Msa1220860:CDS |
| GTCCTCTGGATCTCTAATTA+AGG | 0.363548 | 8_1:-84235722 | None:intergenic |
| TACTGTGTTTGGAGCTGGTT+AGG | 0.369306 | 8_1:+84237386 | Msa1220860:CDS |
| GAAGGACCCCAGGGAACGGG+CGG | 0.380252 | 8_1:+84235965 | Msa1220860:CDS |
| ATAGTTAATAGTACTGTGTT+TGG | 0.388949 | 8_1:+84237375 | Msa1220860:CDS |
| GATAAGCCCCTCCCATGCTT+TGG | 0.389734 | 8_1:+84235763 | Msa1220860:CDS |
| TCGGAAGGACCCCAGGGAAC+GGG | 0.392848 | 8_1:+84235962 | Msa1220860:CDS |
| TCTACAAAATCCATGGATAA+AGG | 0.398211 | 8_1:+84232552 | None:intergenic |
| AGGACCCCAGGGAACGGGCG+GGG | 0.417190 | 8_1:+84235967 | Msa1220860:CDS |
| ATCAAAATTCTTAAAAGAAA+CGG | 0.429179 | 8_1:-84233337 | None:intergenic |
| TTTAAGAAAGGGCGTGGAAT+CGG | 0.452413 | 8_1:+84233308 | Msa1220860:CDS |
| TTTCCCTTTCCGTGAGCCAT+TGG | 0.452477 | 8_1:-84235694 | None:intergenic |
| GATCCAGAGGACTTCCAGTC+AGG | 0.454913 | 8_1:+84235733 | Msa1220860:CDS |
| AATAGTACTGTGTTTGGAGC+TGG | 0.459998 | 8_1:+84237381 | Msa1220860:CDS |
| AGAGAATGTTGATTTAAGAA+AGG | 0.460736 | 8_1:+84233296 | Msa1220860:CDS |
| CATTTCAGTACCTTTATCCA+TGG | 0.469644 | 8_1:-84232562 | None:intergenic |
| ATCATTATCGGAAGGACCCC+AGG | 0.469804 | 8_1:+84235955 | Msa1220860:CDS |
| CCTTTGTTGTTGTAGATGGT+AGG | 0.469828 | 8_1:+84233268 | Msa1220860:intron |
| GATCCAATGGCTCACGGAAA+GGG | 0.471290 | 8_1:+84235691 | Msa1220860:CDS |
| GAGAATGTTGATTTAAGAAA+GGG | 0.481994 | 8_1:+84233297 | Msa1220860:CDS |
| GATTTATTTGCCCTCCTATG+TGG | 0.489666 | 8_1:+84235904 | Msa1220860:CDS |
| CTTTGTTGTTGTAGATGGTA+GGG | 0.496791 | 8_1:+84233269 | Msa1220860:intron |
| TGTTGATTTAAGAAAGGGCG+TGG | 0.497594 | 8_1:+84233302 | Msa1220860:CDS |
| AGTCCTGACTGGAAGTCCTC+TGG | 0.502119 | 8_1:-84235736 | None:intergenic |
| AAGGACCCCAGGGAACGGGC+GGG | 0.511815 | 8_1:+84235966 | Msa1220860:CDS |
| CCAATTCCGCATCCAAAGCA+TGG | 0.518285 | 8_1:-84235775 | None:intergenic |
| ATCGGAAGGACCCCAGGGAA+CGG | 0.537686 | 8_1:+84235961 | Msa1220860:CDS |
| CTTTATGTGGCAGGACAAGC+AGG | 0.542559 | 8_1:+84235667 | Msa1220860:intron |
| CCCCTCCCATGCTTTGGATG+CGG | 0.543713 | 8_1:+84235769 | Msa1220860:CDS |
| CTTGAATTACTCCGAGCAAA+GGG | 0.545855 | 8_1:-84233369 | None:intergenic |
| TTCCGCATCCAAAGCATGGG+AGG | 0.555498 | 8_1:-84235771 | None:intergenic |
| TCTTGAATTACTCCGAGCAA+AGG | 0.556216 | 8_1:-84233370 | None:intergenic |
| AGATCCAATGGCTCACGGAA+AGG | 0.578977 | 8_1:+84235690 | Msa1220860:CDS |
| GCTTATCATAAAGTCCTGAC+TGG | 0.578995 | 8_1:-84235747 | None:intergenic |
| TCCGCATCCAAAGCATGGGA+GGG | 0.588988 | 8_1:-84235770 | None:intergenic |
| GCTTTGGATGCGGAATTGGA+TGG | 0.591155 | 8_1:+84235779 | Msa1220860:CDS |
| CAATTCCGCATCCAAAGCAT+GGG | 0.593569 | 8_1:-84235774 | None:intergenic |
| GTTGCATAGAACCACATAGG+AGG | 0.594452 | 8_1:-84235915 | None:intergenic |
| CCGCATCCAAAGCATGGGAG+GGG | 0.606480 | 8_1:-84235769 | None:intergenic |
| AGGACAAGCAGGAGATCCAA+TGG | 0.609106 | 8_1:+84235678 | Msa1220860:intron |
| TGCCTTAATTAGAGATCCAG+AGG | 0.616154 | 8_1:+84235720 | Msa1220860:CDS |
| TTGCATAGAACCACATAGGA+GGG | 0.616476 | 8_1:-84235914 | None:intergenic |
| ATTGTTGCATAGAACCACAT+AGG | 0.645975 | 8_1:-84235918 | None:intergenic |
| TCATTATCGGAAGGACCCCA+GGG | 0.659027 | 8_1:+84235956 | Msa1220860:CDS |
| GCAGGAGATCCAATGGCTCA+CGG | 0.665431 | 8_1:+84235685 | Msa1220860:CDS |
| TGTTGTTGTAGATGGTAGGG+TGG | 0.672021 | 8_1:+84233272 | Msa1220860:intron |
| AGAGATTACAGCAATTGCAG+AGG | 0.673672 | 8_1:-84235997 | None:intergenic |
| CCAGCCCCGCCCGTTCCCTG+GGG | 0.674263 | 8_1:-84235971 | None:intergenic |
| TTTGCTCGGAGTAATTCAAG+AGG | 0.694585 | 8_1:+84233372 | Msa1220860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATAAAATAAAAT+AGG | - | chr8_1:84233448-84233467 | None:intergenic | 0.0% |
| !! | ATAATATAATATGTTTCTTA+TGG | + | chr8_1:84232929-84232948 | Msa1220860:intron | 10.0% |
| !! | AAATAAAATAAAATAGGTAA+TGG | - | chr8_1:84233442-84233461 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTTTTGAAA+CGG | - | chr8_1:84233633-84233652 | None:intergenic | 10.0% |
| !! | TAAATCATAAAAATAATTGT+TGG | - | chr8_1:84234383-84234402 | None:intergenic | 10.0% |
| !!! | TAATTTTCGTTTTTATTTTT+GGG | - | chr8_1:84235225-84235244 | None:intergenic | 10.0% |
| !!! | TTTTGTAAGAAAAATAAAAT+TGG | - | chr8_1:84235588-84235607 | None:intergenic | 10.0% |
| !! | GAAACTTTAAATTAAATTAA+AGG | + | chr8_1:84236871-84236890 | Msa1220860:intron | 10.0% |
| !! | ATCAAAATTCTTAAAAGAAA+CGG | - | chr8_1:84233340-84233359 | None:intergenic | 15.0% |
| !!! | TTAAGAATTTTGATCTTTTA+AGG | + | chr8_1:84233346-84233365 | Msa1220860:CDS | 15.0% |
| !! | TAATCTGTATAATAAATACT+AGG | - | chr8_1:84233659-84233678 | None:intergenic | 15.0% |
| !! | ATATATTCTACTATAAATAG+AGG | + | chr8_1:84234321-84234340 | Msa1220860:intron | 15.0% |
| !!! | CAAAACTATTTTATCAAATT+TGG | + | chr8_1:84234410-84234429 | Msa1220860:intron | 15.0% |
| !!! | GTAATTTTCGTTTTTATTTT+TGG | - | chr8_1:84235226-84235245 | None:intergenic | 15.0% |
| !! | CATATTAAAAAGATGAAAAT+TGG | + | chr8_1:84235245-84235264 | Msa1220860:intron | 15.0% |
| !!! | ATATAATTTGTCTTTTTGAA+TGG | + | chr8_1:84236738-84236757 | Msa1220860:intron | 15.0% |
| !! | ACATTTGAATTAAAAATAGA+GGG | - | chr8_1:84237062-84237081 | None:intergenic | 15.0% |
| !!! | TATTTTTAATTCAAATGTGA+AGG | + | chr8_1:84237064-84237083 | Msa1220860:intron | 15.0% |
| !!! | TATTTTTTTAATATAGCAAC+TGG | + | chr8_1:84237242-84237261 | Msa1220860:intron | 15.0% |
| !! | AACATTTATGCAAATTAATC+AGG | - | chr8_1:84232603-84232622 | None:intergenic | 20.0% |
| !! | ATTTGTAATTTATTACATGG+AGG | - | chr8_1:84232972-84232991 | None:intergenic | 20.0% |
| !! | TCCATGTAATAAATTACAAA+TGG | + | chr8_1:84232971-84232990 | Msa1220860:intron | 20.0% |
| !! | TCCATTTGTAATTTATTACA+TGG | - | chr8_1:84232975-84232994 | None:intergenic | 20.0% |
| !! | TGTAATAAATTACAAATGGA+AGG | + | chr8_1:84232975-84232994 | Msa1220860:intron | 20.0% |
| !! | TAGTTTATCATTATTTGGAT+TGG | + | chr8_1:84233181-84233200 | Msa1220860:intron | 20.0% |
| !! | ACTTAAGTAGAAAAATCATA+TGG | - | chr8_1:84233417-84233436 | None:intergenic | 20.0% |
| !! | TTTAATACTAGGATTTGATT+AGG | - | chr8_1:84233605-84233624 | None:intergenic | 20.0% |
| !! | TCAATTTGCAATTATATCAT+TGG | + | chr8_1:84233714-84233733 | Msa1220860:intron | 20.0% |
| !! | TAATAGTGAATATTAGGATT+TGG | - | chr8_1:84234242-84234261 | None:intergenic | 20.0% |
| !! | AAATCCTAATATTCACTATT+AGG | + | chr8_1:84234241-84234260 | Msa1220860:intron | 20.0% |
| !! | TAATCCTAATAGTGAATATT+AGG | - | chr8_1:84234248-84234267 | None:intergenic | 20.0% |
| !! | TAGGATTAGAATTATAGATT+AGG | + | chr8_1:84234260-84234279 | Msa1220860:intron | 20.0% |
| !! | TATAGATTAGGATTTGAATT+AGG | + | chr8_1:84234272-84234291 | Msa1220860:intron | 20.0% |
| !! | ATGTTTATTACCTAGAAAAT+AGG | + | chr8_1:84235095-84235114 | Msa1220860:intron | 20.0% |
| !!! | TTGTCATGTGAATTTTTTAT+AGG | + | chr8_1:84235282-84235301 | Msa1220860:intron | 20.0% |
| !! | ATTCATCTATATCGATATAA+TGG | - | chr8_1:84235397-84235416 | None:intergenic | 20.0% |
| !! | AGTAATATGCTAATGATTTA+TGG | + | chr8_1:84235499-84235518 | Msa1220860:intron | 20.0% |
| !!! | TTAAATTGCAGATTTCTTTT+TGG | + | chr8_1:84235882-84235901 | Msa1220860:intron | 20.0% |
| !! | TAGTTAAGTTCAAATAAACA+AGG | + | chr8_1:84236181-84236200 | Msa1220860:intron | 20.0% |
| !!! | ATCTCATGTTACTATATTTT+TGG | + | chr8_1:84236380-84236399 | Msa1220860:intron | 20.0% |
| !! | TTTGATACAAATTTGTGTAT+AGG | + | chr8_1:84236538-84236557 | Msa1220860:intron | 20.0% |
| !!! | AATGGTCAAAATAAGAATTT+TGG | + | chr8_1:84236756-84236775 | Msa1220860:intron | 20.0% |
| !! | CACATTTGAATTAAAAATAG+AGG | - | chr8_1:84237063-84237082 | None:intergenic | 20.0% |
| !! | TATACCTACTATAAATTTGA+TGG | + | chr8_1:84237207-84237226 | Msa1220860:intron | 20.0% |
| !!! | AAAATATGTTTTGTTAGCAC+TGG | + | chr8_1:84232733-84232752 | Msa1220860:intron | 25.0% |
| !!! | CTACTAGGTTTTAACTTTTA+AGG | + | chr8_1:84232816-84232835 | Msa1220860:intron | 25.0% |
| ! | TATATTATGAAACTCTCACA+TGG | - | chr8_1:84232917-84232936 | None:intergenic | 25.0% |
| ! | AATAAATTACAAATGGAAGG+AGG | + | chr8_1:84232978-84232997 | Msa1220860:intron | 25.0% |
| !! | TGGTCTAGTTTATCATTATT+TGG | + | chr8_1:84233176-84233195 | Msa1220860:intron | 25.0% |
| ! | TTCCATTTGAAAATGCTTAA+TGG | - | chr8_1:84233245-84233264 | None:intergenic | 25.0% |
| !!! | AGAGAATGTTGATTTAAGAA+AGG | + | chr8_1:84233296-84233315 | Msa1220860:CDS | 25.0% |
| !!! | GAGAATGTTGATTTAAGAAA+GGG | + | chr8_1:84233297-84233316 | Msa1220860:CDS | 25.0% |
| ! | AAACGGCAAAATTTAATACT+AGG | - | chr8_1:84233616-84233635 | None:intergenic | 25.0% |
| ! | ACAGATTAGAATCATAGATT+AGG | + | chr8_1:84233671-84233690 | Msa1220860:intron | 25.0% |
| ! | GAGAGAAAATTCATCAAAAA+AGG | - | chr8_1:84233817-84233836 | None:intergenic | 25.0% |
| !! | TCTTATTATCTCTTTTCATC+CGG | + | chr8_1:84233878-84233897 | Msa1220860:intron | 25.0% |
| ! | TAGAGAAAATACAAACAACA+AGG | - | chr8_1:84234144-84234163 | None:intergenic | 25.0% |
| !!! | TTAAGTTTGTTACAATGTGT+TGG | - | chr8_1:84234174-84234193 | None:intergenic | 25.0% |
| !!! | ACTTAGTAAGCTTTATTTTG+AGG | + | chr8_1:84234195-84234214 | Msa1220860:intron | 25.0% |
| !!! | CTTAGTAAGCTTTATTTTGA+GGG | + | chr8_1:84234196-84234215 | Msa1220860:intron | 25.0% |
| !!! | TTAGTAAGCTTTATTTTGAG+GGG | + | chr8_1:84234197-84234216 | Msa1220860:intron | 25.0% |
| ! | TTTATCAAATTTGGCTAAAC+TGG | + | chr8_1:84234419-84234438 | Msa1220860:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr8_1:84234635-84234654 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr8_1:84234639-84234658 | Msa1220860:intron | 25.0% |
| ! | AACTATTAGGAAAGATTTAG+AGG | - | chr8_1:84234679-84234698 | None:intergenic | 25.0% |
| ! | AGACTATAAGAGAAACTATT+AGG | - | chr8_1:84234692-84234711 | None:intergenic | 25.0% |
| ! | TTATGATGCAACAATTACAA+AGG | - | chr8_1:84234745-84234764 | None:intergenic | 25.0% |
| ! | CTTTCATCAATTATACAAAG+AGG | - | chr8_1:84234778-84234797 | None:intergenic | 25.0% |
| !!! | TCACTTTTGTTTGATAACTT+TGG | - | chr8_1:84234877-84234896 | None:intergenic | 25.0% |
| ! | ATTACTAGTATTTCAATCCT+AGG | - | chr8_1:84235032-84235051 | None:intergenic | 25.0% |
| ! | CATTGTATTTGATAAATGCA+TGG | - | chr8_1:84235067-84235086 | None:intergenic | 25.0% |
| !!! | TTTTCGTTTTTATTTTTGGG+TGG | - | chr8_1:84235222-84235241 | None:intergenic | 25.0% |
| !! | GATGAAAATTGGACTTTTAA+TGG | + | chr8_1:84235256-84235275 | Msa1220860:intron | 25.0% |
| !! | TATATCGATATAATGGAAGT+CGG | - | chr8_1:84235390-84235409 | None:intergenic | 25.0% |
| ! | AGAATAGACTCATTAAATAC+TGG | + | chr8_1:84235553-84235572 | Msa1220860:intron | 25.0% |
| !! | TATGCAACAATTCTCTATTT+TGG | + | chr8_1:84235930-84235949 | Msa1220860:CDS | 25.0% |
| !! | ATGCAACAATTCTCTATTTT+GGG | + | chr8_1:84235931-84235950 | Msa1220860:CDS | 25.0% |
| !!! | TCTATTTTGGGAATCATTAT+CGG | + | chr8_1:84235943-84235962 | Msa1220860:CDS | 25.0% |
| ! | TAACTTGATACGAAAAAGAA+AGG | - | chr8_1:84236461-84236480 | None:intergenic | 25.0% |
| ! | ACACAAATTTGTATCAAAAG+TGG | - | chr8_1:84236536-84236555 | None:intergenic | 25.0% |
| ! | AGAGATCATGTTAATTTAGA+TGG | + | chr8_1:84236657-84236676 | Msa1220860:intron | 25.0% |
| ! | TTTAAAAACGTCAACAATGT+TGG | - | chr8_1:84236799-84236818 | None:intergenic | 25.0% |
| !!! | AGGAAGATTTTTTTAACAGA+AGG | - | chr8_1:84237039-84237058 | None:intergenic | 25.0% |
| ! | TTTGAATTAAAAATAGAGGG+AGG | - | chr8_1:84237059-84237078 | None:intergenic | 25.0% |
| !!! | TTTTAATTCAAATGTGAAGG+TGG | + | chr8_1:84237067-84237086 | Msa1220860:intron | 25.0% |
| ! | GTATATAACAGCTTCAATAT+AGG | + | chr8_1:84237155-84237174 | Msa1220860:intron | 25.0% |
| ! | ATAGTTAATAGTACTGTGTT+TGG | + | chr8_1:84237375-84237394 | Msa1220860:CDS | 25.0% |
| TGAACACAATAGAGAAATCA+CGG | - | chr8_1:84232694-84232713 | None:intergenic | 30.0% | |
| GTTTGTATGATTTAGCTACT+AGG | + | chr8_1:84232801-84232820 | Msa1220860:intron | 30.0% | |
| TGATGTGAATTCAGAAATTG+TGG | + | chr8_1:84233038-84233057 | Msa1220860:intron | 30.0% | |
| TTGAAAATGCTTAATGGAGA+TGG | - | chr8_1:84233239-84233258 | None:intergenic | 30.0% | |
| ! | CTCCATTAAGCATTTTCAAA+TGG | + | chr8_1:84233240-84233259 | Msa1220860:intron | 30.0% |
| !! | ATTTCCTTTGTTGTTGTAGA+TGG | + | chr8_1:84233264-84233283 | Msa1220860:intron | 30.0% |
| GTAATTCAAGAGGTAACAAT+AGG | + | chr8_1:84233382-84233401 | Msa1220860:intron | 30.0% | |
| !!! | GTCAGTTCTTATTTTGTTAG+TGG | + | chr8_1:84233502-84233521 | Msa1220860:intron | 30.0% |
| !!! | AGTTCTTATTTTGTTAGTGG+AGG | + | chr8_1:84233505-84233524 | Msa1220860:intron | 30.0% |
| GGATTTGATTAGGATTGATA+AGG | - | chr8_1:84233595-84233614 | None:intergenic | 30.0% | |
| GGATGAAAAGAGATAATAAG+AGG | - | chr8_1:84233879-84233898 | None:intergenic | 30.0% | |
| TCACTATAGCAAAGACAATT+GGG | - | chr8_1:84234084-84234103 | None:intergenic | 30.0% | |
| !!! | TAGTAAGCTTTATTTTGAGG+GGG | + | chr8_1:84234198-84234217 | Msa1220860:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr8_1:84234655-84234674 | None:intergenic | 30.0% |
| AGATTTAGAGGTTAATGAGT+TGG | - | chr8_1:84234667-84234686 | None:intergenic | 30.0% | |
| !! | TTTGATAACTTTGGTTCTAC+TGG | - | chr8_1:84234868-84234887 | None:intergenic | 30.0% |
| ! | GAGATTCTTATTTATAGCCT+AGG | + | chr8_1:84235012-84235031 | Msa1220860:intron | 30.0% |
| TTTGATAAATGCATGGTAGT+GGG | - | chr8_1:84235060-84235079 | None:intergenic | 30.0% | |
| ATTTGATAAATGCATGGTAG+TGG | - | chr8_1:84235061-84235080 | None:intergenic | 30.0% | |
| AAGTCATTATAGTTGCTAGT+GGG | - | chr8_1:84235140-84235159 | None:intergenic | 30.0% | |
| TAAGTCATTATAGTTGCTAG+TGG | - | chr8_1:84235141-84235160 | None:intergenic | 30.0% | |
| ATCAAAGTCAAAAGACAAAG+GGG | - | chr8_1:84235426-84235445 | None:intergenic | 30.0% | |
| GATCAAAGTCAAAAGACAAA+GGG | - | chr8_1:84235427-84235446 | None:intergenic | 30.0% | |
| AGATCAAAGTCAAAAGACAA+AGG | - | chr8_1:84235428-84235447 | None:intergenic | 30.0% | |
| !!! | TGTCTTTTGACTTTGATCTT+AGG | + | chr8_1:84235429-84235448 | Msa1220860:intron | 30.0% |
| !!! | GTCTTTTGACTTTGATCTTA+GGG | + | chr8_1:84235430-84235449 | Msa1220860:intron | 30.0% |
| AGTGCAAGTAGTTATTTGAA+GGG | - | chr8_1:84235649-84235668 | None:intergenic | 30.0% | |
| AAGTGCAAGTAGTTATTTGA+AGG | - | chr8_1:84235650-84235669 | None:intergenic | 30.0% | |
| ATAACTACTTGCACTTTATG+TGG | + | chr8_1:84235654-84235673 | Msa1220860:intron | 30.0% | |
| TACACACAAATAGACAAGAA+GGG | - | chr8_1:84236041-84236060 | None:intergenic | 30.0% | |
| ATACACACAAATAGACAAGA+AGG | - | chr8_1:84236042-84236061 | None:intergenic | 30.0% | |
| TCAAATAAACAAGGAAGCTT+TGG | + | chr8_1:84236190-84236209 | Msa1220860:intron | 30.0% | |
| GTATTTGATCCATGAAAACA+TGG | - | chr8_1:84236233-84236252 | None:intergenic | 30.0% | |
| TTATGCCAGCTTAAATGATA+TGG | - | chr8_1:84236291-84236310 | None:intergenic | 30.0% | |
| !! | AGTGGACTAAGAATAAAAAC+TGG | - | chr8_1:84236518-84236537 | None:intergenic | 30.0% |
| AGATATTGCAACAGTCATTA+TGG | + | chr8_1:84236683-84236702 | Msa1220860:intron | 30.0% | |
| TAGCGATGTCTAAATTGTTA+TGG | + | chr8_1:84236958-84236977 | Msa1220860:intron | 30.0% | |
| CACACCATCAAATTTATAGT+AGG | - | chr8_1:84237214-84237233 | None:intergenic | 30.0% | |
| TTAAATGCTAACAACAGCTC+AGG | - | chr8_1:84232870-84232889 | None:intergenic | 35.0% | |
| AAATTACAAATGGAAGGAGG+AGG | + | chr8_1:84232981-84233000 | Msa1220860:intron | 35.0% | |
| !! | CTTTGTTGTTGTAGATGGTA+GGG | + | chr8_1:84233269-84233288 | Msa1220860:intron | 35.0% |
| !!! | CTTATTTTGTTAGTGGAGGA+AGG | + | chr8_1:84233509-84233528 | Msa1220860:intron | 35.0% |
| ! | TAGAGTGATAAAGCGTTCAA+AGG | - | chr8_1:84233539-84233558 | None:intergenic | 35.0% |
| ! | AATTTTCTCTCTCCTCTACA+AGG | + | chr8_1:84233826-84233845 | Msa1220860:intron | 35.0% |
| ! | CTGGTTGAATCAAATTTTCC+CGG | - | chr8_1:84233996-84234015 | None:intergenic | 35.0% |
| GTCACTATAGCAAAGACAAT+TGG | - | chr8_1:84234085-84234104 | None:intergenic | 35.0% | |
| !! | ACTTATAGTCTTGGTTCTAC+CGG | - | chr8_1:84234918-84234937 | None:intergenic | 35.0% |
| GGGTTAAGAACTTATAGTCT+TGG | - | chr8_1:84234927-84234946 | None:intergenic | 35.0% | |
| AGTTCTTAACCCAAGAACAA+AGG | + | chr8_1:84234935-84234954 | Msa1220860:intron | 35.0% | |
| ! | AGAGCTTTTCCTTTGTTCTT+GGG | - | chr8_1:84234947-84234966 | None:intergenic | 35.0% |
| ! | CATGTTAGTGCCTATTTTCT+AGG | - | chr8_1:84235108-84235127 | None:intergenic | 35.0% |
| !! | CTACTTTGAAGCATTTAGAG+AGG | + | chr8_1:84235166-84235185 | Msa1220860:intron | 35.0% |
| TCAAAGTCAAAAGACAAAGG+GGG | - | chr8_1:84235425-84235444 | None:intergenic | 35.0% | |
| CTGCACATTATCTCTAAACT+AGG | - | chr8_1:84235535-84235554 | None:intergenic | 35.0% | |
| ATTGTTGCATAGAACCACAT+AGG | - | chr8_1:84235921-84235940 | None:intergenic | 35.0% | |
| !! | TTTTGGGAATCATTATCGGA+AGG | + | chr8_1:84235947-84235966 | Msa1220860:CDS | 35.0% |
| CTGAGCTAATAGTATTTACC+TGG | - | chr8_1:84236154-84236173 | None:intergenic | 35.0% | |
| ! | TGAAAACATGGTTTGTCAAC+TGG | - | chr8_1:84236221-84236240 | None:intergenic | 35.0% |
| ! | GTTGACAAACCATGTTTTCA+TGG | + | chr8_1:84236221-84236240 | Msa1220860:intron | 35.0% |
| ACAAGCCATATCATTTAAGC+TGG | + | chr8_1:84236283-84236302 | Msa1220860:intron | 35.0% | |
| TCACAACTTATAGCAACTCA+AGG | - | chr8_1:84236317-84236336 | None:intergenic | 35.0% | |
| ! | TTGAGTTGCTATAAGTTGTG+AGG | + | chr8_1:84236316-84236335 | Msa1220860:intron | 35.0% |
| GTAACATGAGATATCTGCAA+TGG | - | chr8_1:84236372-84236391 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGCGAAACTACGTT+AGG | + | chr8_1:84236395-84236414 | Msa1220860:intron | 35.0% |
| TGTTATGGTGATAAACTTGC+AGG | + | chr8_1:84236973-84236992 | Msa1220860:intron | 35.0% | |
| ACATTTGAAAGCGATTCTGA+CGG | + | chr8_1:84237106-84237125 | Msa1220860:intron | 35.0% | |
| ACAATAGAGAAATCACGGCA+AGG | - | chr8_1:84232689-84232708 | None:intergenic | 40.0% | |
| TGGAGGAATAATCATCAGTC+TGG | - | chr8_1:84232955-84232974 | None:intergenic | 40.0% | |
| AGTAATACGTATCACCAGAG+TGG | + | chr8_1:84233128-84233147 | Msa1220860:intron | 40.0% | |
| AGACCATAGACTTGAAAGCT+TGG | - | chr8_1:84233162-84233181 | None:intergenic | 40.0% | |
| CCTACCATCTACAACAACAA+AGG | - | chr8_1:84233271-84233290 | None:intergenic | 40.0% | |
| !! | CCTTTGTTGTTGTAGATGGT+AGG | + | chr8_1:84233268-84233287 | Msa1220860:intron | 40.0% |
| !! | TGTTGATTTAAGAAAGGGCG+TGG | + | chr8_1:84233302-84233321 | Msa1220860:CDS | 40.0% |
| ! | TTTAAGAAAGGGCGTGGAAT+CGG | + | chr8_1:84233308-84233327 | Msa1220860:CDS | 40.0% |
| !!! | ATCTTTTAAGGCCCTTTGCT+CGG | + | chr8_1:84233358-84233377 | Msa1220860:CDS | 40.0% |
| CTTGAATTACTCCGAGCAAA+GGG | - | chr8_1:84233372-84233391 | None:intergenic | 40.0% | |
| TCTTGAATTACTCCGAGCAA+AGG | - | chr8_1:84233373-84233392 | None:intergenic | 40.0% | |
| TTTGCTCGGAGTAATTCAAG+AGG | + | chr8_1:84233372-84233391 | Msa1220860:CDS | 40.0% | |
| !! | ATAAGGCGACTTGGTGATTT+GGG | - | chr8_1:84233578-84233597 | None:intergenic | 40.0% |
| TTAGGATTGATAAGGCGACT+TGG | - | chr8_1:84233587-84233606 | None:intergenic | 40.0% | |
| TACAAGGATCTGCTATGGTT+TGG | + | chr8_1:84233842-84233861 | Msa1220860:intron | 40.0% | |
| AGTAGGACAAAAACGTTGAC+CGG | - | chr8_1:84233900-84233919 | None:intergenic | 40.0% | |
| ! | TTTTCGAAAATGGGTCTCAC+TGG | - | chr8_1:84234030-84234049 | None:intergenic | 40.0% |
| ! | GACTGGTGGTTTTCGAAAAT+GGG | - | chr8_1:84234039-84234058 | None:intergenic | 40.0% |
| ! | TGACTGGTGGTTTTCGAAAA+TGG | - | chr8_1:84234040-84234059 | None:intergenic | 40.0% |
| ATGATTTCAAAGGTGACTGG+TGG | - | chr8_1:84234053-84234072 | None:intergenic | 40.0% | |
| TGGATGATTTCAAAGGTGAC+TGG | - | chr8_1:84234056-84234075 | None:intergenic | 40.0% | |
| TCCAGTTGTGCTACCATTTA+CGG | + | chr8_1:84234106-84234125 | Msa1220860:intron | 40.0% | |
| AACAACCAAGCCTTACTAAG+TGG | + | chr8_1:84234584-84234603 | Msa1220860:intron | 40.0% | |
| ACAACCAAGCCTTACTAAGT+GGG | + | chr8_1:84234585-84234604 | Msa1220860:intron | 40.0% | |
| GAAATTGATACGTGACCGAT+AGG | + | chr8_1:84234797-84234816 | Msa1220860:intron | 40.0% | |
| !! | TGTTTTCAAGACGGTCCTAT+CGG | - | chr8_1:84234815-84234834 | None:intergenic | 40.0% |
| !! | TTCCTTGCCTGTTTTCAAGA+CGG | - | chr8_1:84234824-84234843 | None:intergenic | 40.0% |
| !! | ATAACTTTGGTTCTACTGGC+AGG | - | chr8_1:84234864-84234883 | None:intergenic | 40.0% |
| ! | GAGAGCTTTTCCTTTGTTCT+TGG | - | chr8_1:84234948-84234967 | None:intergenic | 40.0% |
| ! | TTGAAGCATTTAGAGAGGCT+AGG | + | chr8_1:84235171-84235190 | Msa1220860:intron | 40.0% |
| TCAAGAGTTCACTAAGCATG+TGG | - | chr8_1:84235315-84235334 | None:intergenic | 40.0% | |
| TGCCTTAATTAGAGATCCAG+AGG | + | chr8_1:84235720-84235739 | Msa1220860:CDS | 40.0% | |
| GTCCTCTGGATCTCTAATTA+AGG | - | chr8_1:84235725-84235744 | None:intergenic | 40.0% | |
| GCTTATCATAAAGTCCTGAC+TGG | - | chr8_1:84235750-84235769 | None:intergenic | 40.0% | |
| GATTTATTTGCCCTCCTATG+TGG | + | chr8_1:84235904-84235923 | Msa1220860:CDS | 40.0% | |
| TTGCATAGAACCACATAGGA+GGG | - | chr8_1:84235917-84235936 | None:intergenic | 40.0% | |
| AGAGATTACAGCAATTGCAG+AGG | - | chr8_1:84236000-84236019 | None:intergenic | 40.0% | |
| CATTTGTGAATGCATGCATG+AGG | - | chr8_1:84236075-84236094 | None:intergenic | 40.0% | |
| GATATCTGCAATGGCAGAAA+AGG | - | chr8_1:84236363-84236382 | None:intergenic | 40.0% | |
| ATCTGATTGTGACCTCATTG+TGG | - | chr8_1:84236627-84236646 | None:intergenic | 40.0% | |
| AACTGGAATGTTGAAGTGCA+TGG | + | chr8_1:84237259-84237278 | Msa1220860:intron | 40.0% | |
| ! | AATAGTACTGTGTTTGGAGC+TGG | + | chr8_1:84237381-84237400 | Msa1220860:CDS | 40.0% |
| TGTTCACTCGTGTGATGCAT+AGG | + | chr8_1:84232708-84232727 | Msa1220860:intron | 45.0% | |
| !! | TTAGCACTGGTGTGATAAGC+AGG | + | chr8_1:84232746-84232765 | Msa1220860:intron | 45.0% |
| !! | TAGCACTGGTGTGATAAGCA+GGG | + | chr8_1:84232747-84232766 | Msa1220860:intron | 45.0% |
| ! | AGGAGGTGTGTTCATTCATC+AGG | + | chr8_1:84232998-84233017 | Msa1220860:intron | 45.0% |
| ! | GCTCCAAGCTTTCAAGTCTA+TGG | + | chr8_1:84233156-84233175 | Msa1220860:intron | 45.0% |
| TGGTTGACTGAGCAAAAGTG+TGG | + | chr8_1:84233201-84233220 | Msa1220860:intron | 45.0% | |
| TGTTGTTGTAGATGGTAGGG+TGG | + | chr8_1:84233272-84233291 | Msa1220860:intron | 45.0% | |
| !! | GATAAGGCGACTTGGTGATT+TGG | - | chr8_1:84233579-84233598 | None:intergenic | 45.0% |
| GCCTAAGTGGAAGTTATGCT+CGG | - | chr8_1:84233752-84233771 | None:intergenic | 45.0% | |
| AAATCATCCAGTAGCTGCAG+TGG | - | chr8_1:84233786-84233805 | None:intergenic | 45.0% | |
| TCCTCTACAAGGATCTGCTA+TGG | + | chr8_1:84233837-84233856 | Msa1220860:intron | 45.0% | |
| ACCATAGCAGATCCTTGTAG+AGG | - | chr8_1:84233841-84233860 | None:intergenic | 45.0% | |
| GCACAATGAATGTGCACAGT+AGG | - | chr8_1:84233928-84233947 | None:intergenic | 45.0% | |
| ACTGACGTGAAAGAGAAGCA+AGG | - | chr8_1:84233957-84233976 | None:intergenic | 45.0% | |
| TTGCTTCTCTTTCACGTCAG+TGG | + | chr8_1:84233956-84233975 | Msa1220860:intron | 45.0% | |
| TGCTTCTCTTTCACGTCAGT+GGG | + | chr8_1:84233957-84233976 | Msa1220860:intron | 45.0% | |
| ! | AGTGGGTTTCTCTTTGCATC+CGG | + | chr8_1:84233974-84233993 | Msa1220860:intron | 45.0% |
| GGCTCACTGGATGATTTCAA+AGG | - | chr8_1:84234063-84234082 | None:intergenic | 45.0% | |
| GTAAATGGTAGCACAACTGG+AGG | - | chr8_1:84234107-84234126 | None:intergenic | 45.0% | |
| GAGGTGAGTGTAGTCTGATT+TGG | + | chr8_1:84234340-84234359 | Msa1220860:intron | 45.0% | |
| TCCACACATGTACTTGTGAG+AGG | + | chr8_1:84234469-84234488 | Msa1220860:intron | 45.0% | |
| CCACACATGTACTTGTGAGA+GGG | + | chr8_1:84234470-84234489 | Msa1220860:intron | 45.0% | |
| CACACATGTACTTGTGAGAG+GGG | + | chr8_1:84234471-84234490 | Msa1220860:intron | 45.0% | |
| CAACCAAGCCTTACTAAGTG+GGG | + | chr8_1:84234586-84234605 | Msa1220860:intron | 45.0% | |
| TTGAGCACGTAACACACTCA+AGG | - | chr8_1:84234718-84234737 | None:intergenic | 45.0% | |
| GATAGGACCGTCTTGAAAAC+AGG | + | chr8_1:84234814-84234833 | Msa1220860:intron | 45.0% | |
| GAGTTCACTAAGCATGTGGA+AGG | - | chr8_1:84235311-84235330 | None:intergenic | 45.0% | |
| GTTCTGCACGTCATTTACAG+CGG | + | chr8_1:84235355-84235374 | Msa1220860:intron | 45.0% | |
| GTCAAAAGACAAAGGGGGAA+TGG | - | chr8_1:84235420-84235439 | None:intergenic | 45.0% | |
| CTACTTGCACTTTATGTGGC+AGG | + | chr8_1:84235658-84235677 | Msa1220860:intron | 45.0% | |
| CAATTCCGCATCCAAAGCAT+GGG | - | chr8_1:84235777-84235796 | None:intergenic | 45.0% | |
| CAATCATAGCAGCGAGCAAA+TGG | - | chr8_1:84235837-84235856 | None:intergenic | 45.0% | |
| GTTGCATAGAACCACATAGG+AGG | - | chr8_1:84235918-84235937 | None:intergenic | 45.0% | |
| AAGAAGGGAGCAGAGAGAAA+GGG | - | chr8_1:84236026-84236045 | None:intergenic | 45.0% | |
| ! | GAGTTGCTTTGAACATAGCC+AGG | + | chr8_1:84236133-84236152 | Msa1220860:intron | 45.0% |
| TGGCAGAAAAGGAACTTGGT+TGG | - | chr8_1:84236352-84236371 | None:intergenic | 45.0% | |
| GCAATGGCAGAAAAGGAACT+TGG | - | chr8_1:84236356-84236375 | None:intergenic | 45.0% | |
| !! | GTCTAATTGGTGGTGATGAG+TGG | - | chr8_1:84236594-84236613 | None:intergenic | 45.0% |
| TCATCAAGGGGTCTAATTGG+TGG | - | chr8_1:84236604-84236623 | None:intergenic | 45.0% | |
| TGGTCATCAAGGGGTCTAAT+TGG | - | chr8_1:84236607-84236626 | None:intergenic | 45.0% | |
| ACCTCATTGTGGTCATCAAG+GGG | - | chr8_1:84236616-84236635 | None:intergenic | 45.0% | |
| GACCTCATTGTGGTCATCAA+GGG | - | chr8_1:84236617-84236636 | None:intergenic | 45.0% | |
| TGACCTCATTGTGGTCATCA+AGG | - | chr8_1:84236618-84236637 | None:intergenic | 45.0% | |
| AATGTTGAAGTGCATGGCGT+CGG | + | chr8_1:84237265-84237284 | Msa1220860:intron | 45.0% | |
| !! | AGCACTGGTGTGATAAGCAG+GGG | + | chr8_1:84232748-84232767 | Msa1220860:intron | 50.0% |
| ACGTATCACCAGAGTGGTCT+TGG | + | chr8_1:84233134-84233153 | Msa1220860:intron | 50.0% | |
| ! | GCAAAAGTGTGGAGTTAGCG+AGG | + | chr8_1:84233212-84233231 | Msa1220860:intron | 50.0% |
| GCCGAGCATAACTTCCACTT+AGG | + | chr8_1:84233748-84233767 | Msa1220860:intron | 50.0% | |
| GTGCACAGTAGGACAGAAGT+AGG | - | chr8_1:84233917-84233936 | None:intergenic | 50.0% | |
| GTGGGTTTCTCTTTGCATCC+GGG | + | chr8_1:84233975-84233994 | Msa1220860:intron | 50.0% | |
| GCAAAGACAATTGGGCTCAC+TGG | - | chr8_1:84234076-84234095 | None:intergenic | 50.0% | |
| GCCGTAAATGGTAGCACAAC+TGG | - | chr8_1:84234110-84234129 | None:intergenic | 50.0% | |
| GTCGTAGCTTCAGCCGTAAA+TGG | - | chr8_1:84234122-84234141 | None:intergenic | 50.0% | |
| CCCTCTCACAAGTACATGTG+TGG | - | chr8_1:84234473-84234492 | None:intergenic | 50.0% | |
| CAAGCCTTACTAAGTGGGGT+CGG | + | chr8_1:84234590-84234609 | Msa1220860:intron | 50.0% | |
| GACCGTCTTGAAAACAGGCA+AGG | + | chr8_1:84234819-84234838 | Msa1220860:intron | 50.0% | |
| !! | ATAGTCTTGGTTCTACCGGC+AGG | - | chr8_1:84234914-84234933 | None:intergenic | 50.0% |
| CTTTATGTGGCAGGACAAGC+AGG | + | chr8_1:84235667-84235686 | Msa1220860:intron | 50.0% | |
| AGGACAAGCAGGAGATCCAA+TGG | + | chr8_1:84235678-84235697 | Msa1220860:intron | 50.0% | |
| AGATCCAATGGCTCACGGAA+AGG | + | chr8_1:84235690-84235709 | Msa1220860:CDS | 50.0% | |
| GATCCAATGGCTCACGGAAA+GGG | + | chr8_1:84235691-84235710 | Msa1220860:CDS | 50.0% | |
| TTTCCCTTTCCGTGAGCCAT+TGG | - | chr8_1:84235697-84235716 | None:intergenic | 50.0% | |
| CCAATTCCGCATCCAAAGCA+TGG | - | chr8_1:84235778-84235797 | None:intergenic | 50.0% | |
| ! | CCATGCTTTGGATGCGGAAT+TGG | + | chr8_1:84235775-84235794 | Msa1220860:CDS | 50.0% |
| ! | GCTTTGGATGCGGAATTGGA+TGG | + | chr8_1:84235779-84235798 | Msa1220860:CDS | 50.0% |
| TAGCAGCGAGCAAATGGAGA+AGG | - | chr8_1:84235831-84235850 | None:intergenic | 50.0% | |
| ATCATTATCGGAAGGACCCC+AGG | + | chr8_1:84235955-84235974 | Msa1220860:CDS | 50.0% | |
| TCATTATCGGAAGGACCCCA+GGG | + | chr8_1:84235956-84235975 | Msa1220860:CDS | 50.0% | |
| CAAGAAGGGAGCAGAGAGAA+AGG | - | chr8_1:84236027-84236046 | None:intergenic | 50.0% | |
| ! | ACCCCTTGATGACCACAATG+AGG | + | chr8_1:84236612-84236631 | Msa1220860:intron | 50.0% |
| CTTGCAGGCATTAGTGTGCT+CGG | + | chr8_1:84236988-84237007 | Msa1220860:intron | 50.0% | |
| AGGCATTAGTGTGCTCGGTA+GGG | + | chr8_1:84236993-84237012 | Msa1220860:intron | 50.0% | |
| !! | GCGACTTGGTGATTTGGGTG+AGG | - | chr8_1:84233573-84233592 | None:intergenic | 55.0% |
| GTGGAAGTTATGCTCGGCAG+AGG | - | chr8_1:84233746-84233765 | None:intergenic | 55.0% | |
| ! | CTCACTGGAGAAAGTGCAGC+TGG | - | chr8_1:84234015-84234034 | None:intergenic | 55.0% |
| CGACCCCACTTAGTAAGGCT+TGG | - | chr8_1:84234592-84234611 | None:intergenic | 55.0% | |
| GTAGCCGACCCCACTTAGTA+AGG | - | chr8_1:84234597-84234616 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8_1:84234598-84234617 | Msa1220860:intron | 55.0% | |
| !! | TTGGTTCTACTGGCAGGTCG+CGG | - | chr8_1:84234858-84234877 | None:intergenic | 55.0% |
| GCAGGAGATCCAATGGCTCA+CGG | + | chr8_1:84235685-84235704 | Msa1220860:CDS | 55.0% | |
| GATCCAGAGGACTTCCAGTC+AGG | + | chr8_1:84235733-84235752 | Msa1220860:CDS | 55.0% | |
| AGTCCTGACTGGAAGTCCTC+TGG | - | chr8_1:84235739-84235758 | None:intergenic | 55.0% | |
| GATAAGCCCCTCCCATGCTT+TGG | + | chr8_1:84235763-84235782 | Msa1220860:CDS | 55.0% | |
| TCCGCATCCAAAGCATGGGA+GGG | - | chr8_1:84235773-84235792 | None:intergenic | 55.0% | |
| TTCCGCATCCAAAGCATGGG+AGG | - | chr8_1:84235774-84235793 | None:intergenic | 55.0% | |
| CAGGCATTAGTGTGCTCGGT+AGG | + | chr8_1:84236992-84237011 | Msa1220860:intron | 55.0% | |
| GCTTGGAGCCAAGACCACTC+TGG | - | chr8_1:84233145-84233164 | None:intergenic | 60.0% | |
| GGCAGCAGTAGGTGCCTAAG+TGG | - | chr8_1:84233765-84233784 | None:intergenic | 60.0% | |
| GTAGCTGCAGTGGCAGCAGT+AGG | - | chr8_1:84233776-84233795 | None:intergenic | 60.0% | |
| ACTGCTGCCACTGCAGCTAC+TGG | + | chr8_1:84233776-84233795 | Msa1220860:intron | 60.0% | |
| CTACTGGCAGGTCGCGGTTA+GGG | - | chr8_1:84234852-84234871 | None:intergenic | 60.0% | |
| TCTACTGGCAGGTCGCGGTT+AGG | - | chr8_1:84234853-84234872 | None:intergenic | 60.0% | |
| !! | TTGGTTCTACCGGCAGGTCG+CGG | - | chr8_1:84234908-84234927 | None:intergenic | 60.0% |
| CCGCATCCAAAGCATGGGAG+GGG | - | chr8_1:84235772-84235791 | None:intergenic | 60.0% | |
| ! | CCCCTCCCATGCTTTGGATG+CGG | + | chr8_1:84235769-84235788 | Msa1220860:CDS | 60.0% |
| ATCGGAAGGACCCCAGGGAA+CGG | + | chr8_1:84235961-84235980 | Msa1220860:CDS | 60.0% | |
| AGACCCTAACCGCGACCTGC+CGG | + | chr8_1:84234896-84234915 | Msa1220860:intron | 65.0% | |
| CTACCGGCAGGTCGCGGTTA+GGG | - | chr8_1:84234902-84234921 | None:intergenic | 65.0% | |
| TCTACCGGCAGGTCGCGGTT+AGG | - | chr8_1:84234903-84234922 | None:intergenic | 65.0% | |
| TCGGAAGGACCCCAGGGAAC+GGG | + | chr8_1:84235962-84235981 | Msa1220860:CDS | 65.0% | |
| GAAGGACCCCAGGGAACGGG+CGG | + | chr8_1:84235965-84235984 | Msa1220860:CDS | 70.0% | |
| AAGGACCCCAGGGAACGGGC+GGG | + | chr8_1:84235966-84235985 | Msa1220860:CDS | 70.0% | |
| AGGACCCCAGGGAACGGGCG+GGG | + | chr8_1:84235967-84235986 | Msa1220860:CDS | 75.0% | |
| ! | CCAGCCCCGCCCGTTCCCTG+GGG | - | chr8_1:84235974-84235993 | None:intergenic | 80.0% |
| ! | CCCAGCCCCGCCCGTTCCCT+GGG | - | chr8_1:84235975-84235994 | None:intergenic | 80.0% |
| ! | CCCAGGGAACGGGCGGGGCT+GGG | + | chr8_1:84235972-84235991 | Msa1220860:CDS | 80.0% |
| ! | TCCCAGCCCCGCCCGTTCCC+TGG | - | chr8_1:84235976-84235995 | None:intergenic | 80.0% |
| ! | CCCCAGGGAACGGGCGGGGC+TGG | + | chr8_1:84235971-84235990 | Msa1220860:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84232564 | 84237407 | 84232564 | ID=Msa1220860;Name=Msa1220860 |
| chr8_1 | mRNA | 84232564 | 84237407 | 84232564 | ID=Msa1220860-mRNA-1;Parent=Msa1220860;Name=Msa1220860-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|0.6|1|1|5|0|140 |
| chr8_1 | exon | 84232564 | 84232573 | 84232564 | ID=Msa1220860-mRNA-1:exon:30211;Parent=Msa1220860-mRNA-1 |
| chr8_1 | exon | 84233283 | 84233393 | 84233283 | ID=Msa1220860-mRNA-1:exon:30212;Parent=Msa1220860-mRNA-1 |
| chr8_1 | exon | 84235680 | 84235806 | 84235680 | ID=Msa1220860-mRNA-1:exon:30213;Parent=Msa1220860-mRNA-1 |
| chr8_1 | exon | 84235893 | 84236010 | 84235893 | ID=Msa1220860-mRNA-1:exon:30214;Parent=Msa1220860-mRNA-1 |
| chr8_1 | exon | 84237351 | 84237407 | 84237351 | ID=Msa1220860-mRNA-1:exon:30215;Parent=Msa1220860-mRNA-1 |
| chr8_1 | CDS | 84232564 | 84232573 | 84232564 | ID=Msa1220860-mRNA-1:cds;Parent=Msa1220860-mRNA-1 |
| chr8_1 | CDS | 84233283 | 84233393 | 84233283 | ID=Msa1220860-mRNA-1:cds;Parent=Msa1220860-mRNA-1 |
| chr8_1 | CDS | 84235680 | 84235806 | 84235680 | ID=Msa1220860-mRNA-1:cds;Parent=Msa1220860-mRNA-1 |
| chr8_1 | CDS | 84235893 | 84236010 | 84235893 | ID=Msa1220860-mRNA-1:cds;Parent=Msa1220860-mRNA-1 |
| chr8_1 | CDS | 84237351 | 84237407 | 84237351 | ID=Msa1220860-mRNA-1:cds;Parent=Msa1220860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
