Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221230 | XP_043066731.1 | 88.571 | 35 | 4 | 0 | 91 | 125 | 88 | 122 | 1.71e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221230 | sp|P83863|H2B_PENVA | 85.714 | 35 | 5 | 0 | 91 | 125 | 81 | 115 | 1.49e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221230 | A0A668VX04 | 61.538 | 52 | 20 | 0 | 74 | 125 | 20 | 71 | 9.29e-13 | 68.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1144450 | Msa1221230 | 0.803748 | 3.006701e-49 | -8.615850e-47 |
| Msa0556430 | Msa1221230 | 0.805512 | 1.288127e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221230 | MtrunA17_Chr1g0182361 | 91.429 | 35 | 3 | 0 | 91 | 125 | 102 | 136 | 8.27e-15 | 66.2 |
| Msa1221230 | MtrunA17_Chr1g0197451 | 91.429 | 35 | 3 | 0 | 91 | 125 | 103 | 137 | 1.40e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr7g0263031 | 91.429 | 35 | 3 | 0 | 91 | 125 | 104 | 138 | 1.40e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr1g0198251 | 91.429 | 35 | 3 | 0 | 91 | 125 | 103 | 137 | 1.46e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr4g0030981 | 91.429 | 35 | 3 | 0 | 91 | 125 | 113 | 147 | 1.72e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr4g0046191 | 91.429 | 35 | 3 | 0 | 91 | 125 | 109 | 143 | 1.74e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr4g0030951 | 91.429 | 35 | 3 | 0 | 91 | 125 | 113 | 147 | 2.08e-14 | 65.5 |
| Msa1221230 | MtrunA17_Chr4g0035061 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.31e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0035631 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.31e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0031671 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.36e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0031631 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.36e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0030941 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.36e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0031061 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.44e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0032321 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 2.44e-14 | 65.1 |
| Msa1221230 | MtrunA17_Chr4g0035071 | 88.571 | 35 | 4 | 0 | 91 | 125 | 114 | 148 | 2.01e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221230 | AT3G09480.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 92 | 126 | 1.91e-14 | 65.1 |
| Msa1221230 | AT3G46030.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 111 | 145 | 2.04e-14 | 65.5 |
| Msa1221230 | AT5G02570.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 98 | 132 | 2.38e-14 | 65.1 |
| Msa1221230 | AT5G59910.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 116 | 150 | 2.55e-14 | 65.5 |
| Msa1221230 | AT5G22880.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 111 | 145 | 2.64e-14 | 65.5 |
| Msa1221230 | AT3G45980.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 116 | 150 | 3.22e-14 | 65.1 |
| Msa1221230 | AT2G28720.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 117 | 151 | 3.32e-14 | 65.1 |
| Msa1221230 | AT1G07790.1 | 91.429 | 35 | 3 | 0 | 91 | 125 | 114 | 148 | 3.48e-14 | 65.1 |
| Msa1221230 | AT3G53650.1 | 88.571 | 35 | 4 | 0 | 91 | 125 | 104 | 138 | 8.10e-14 | 63.9 |
| Msa1221230 | AT2G37470.1 | 91.176 | 34 | 3 | 0 | 91 | 124 | 105 | 138 | 8.19e-14 | 63.9 |
Find 43 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTTCGGGGCGGGGATC+GGG | 0.244464 | 8_1:-84774781 | Msa1221230:CDS |
| CCGAAAATGGGGCCCCGAAC+GGG | 0.284225 | 8_1:+84774853 | None:intergenic |
| AGCCTTGAAAATAATGAAAA+TGG | 0.295829 | 8_1:+84775372 | None:intergenic |
| GCTGTCAGACCTGTTCTTCC+TGG | 0.318294 | 8_1:-84774214 | Msa1221230:CDS |
| ACCTGTTCTTCCTGGTGAAT+TGG | 0.318857 | 8_1:-84774206 | Msa1221230:CDS |
| CCACTTCGGGGCGGGGATCG+GGG | 0.324330 | 8_1:-84774780 | Msa1221230:CDS |
| CCCGCGAGGATTCCCCGTTC+GGG | 0.325869 | 8_1:-84774866 | Msa1221230:CDS |
| ATCAGGGAATCCGCAGGGCG+GGG | 0.327752 | 8_1:+84774750 | None:intergenic |
| TGGCTTGTAGGGGTGTCAAT+GGG | 0.350109 | 8_1:-84774906 | Msa1221230:intron |
| CCCCGCGAGGATTCCCCGTT+CGG | 0.354661 | 8_1:-84774867 | Msa1221230:CDS |
| TATTCCACCGAAACCACTTC+GGG | 0.354730 | 8_1:-84774793 | Msa1221230:CDS |
| TCCCCGCCCCGAAGTGGTTT+CGG | 0.358458 | 8_1:+84774786 | None:intergenic |
| TCAGGGAATCCGCAGGGCGG+GGG | 0.383484 | 8_1:+84774751 | None:intergenic |
| AACCACTTCGGGGCGGGGAT+CGG | 0.387290 | 8_1:-84774782 | Msa1221230:CDS |
| GATCAGGGAATCCGCAGGGC+GGG | 0.399513 | 8_1:+84774749 | None:intergenic |
| CACCGAAACCACTTCGGGGC+GGG | 0.420181 | 8_1:-84774788 | Msa1221230:CDS |
| GCCAATTCACCAGGAAGAAC+AGG | 0.424447 | 8_1:+84774205 | None:intergenic |
| TTGGCTTGTAGGGGTGTCAA+TGG | 0.428470 | 8_1:-84774907 | Msa1221230:intron |
| CCCCGAACGGGGAATCCTCG+CGG | 0.439910 | 8_1:+84774865 | None:intergenic |
| CCCGAACGGGGAATCCTCGC+GGG | 0.442773 | 8_1:+84774866 | None:intergenic |
| GTCAATGGGGATTTGCATAA+CGG | 0.463248 | 8_1:-84774892 | Msa1221230:CDS |
| ACCGAAACCACTTCGGGGCG+GGG | 0.463724 | 8_1:-84774787 | Msa1221230:CDS |
| CCCGAAAATGGGGCCCCGAA+CGG | 0.471580 | 8_1:+84774852 | None:intergenic |
| GGATCAGGGAATCCGCAGGG+CGG | 0.489148 | 8_1:+84774748 | None:intergenic |
| CCCCGATCCCCGCCCCGAAG+TGG | 0.490140 | 8_1:+84774780 | None:intergenic |
| TGTAAACTTAGTCACAGCTT+TGG | 0.491166 | 8_1:+84774159 | None:intergenic |
| ACGGGGATCAGGGAATCCGC+AGG | 0.496927 | 8_1:+84774744 | None:intergenic |
| ACTGCTGTCAGACTTGTTCA+AGG | 0.503446 | 8_1:-84774249 | Msa1221230:CDS |
| CGAAAATGGGGCCCCGAACG+GGG | 0.573005 | 8_1:+84774854 | None:intergenic |
| GCATGGTTAGCCAATTCACC+AGG | 0.576440 | 8_1:+84774196 | None:intergenic |
| GCTAACCATGCTGTCTCTGA+GGG | 0.578191 | 8_1:-84774184 | Msa1221230:CDS |
| GGCTTGTAGGGGTGTCAATG+GGG | 0.579856 | 8_1:-84774905 | Msa1221230:intron |
| CCGCCCCGAAGTGGTTTCGG+TGG | 0.581053 | 8_1:+84774789 | None:intergenic |
| ATATTCCACCGAAACCACTT+CGG | 0.585054 | 8_1:-84774794 | Msa1221230:CDS |
| GGCTAACCATGCTGTCTCTG+AGG | 0.586317 | 8_1:-84774185 | Msa1221230:CDS |
| CTTGAAAATAATGAAAATGG+AGG | 0.603138 | 8_1:+84775375 | None:intergenic |
| CGGGGATCAGGGAATCCGCA+GGG | 0.603873 | 8_1:+84774745 | None:intergenic |
| CCGCGAGGATTCCCCGTTCG+GGG | 0.604001 | 8_1:-84774865 | Msa1221230:CDS |
| CCGAACGGGGAATCCTCGCG+GGG | 0.611794 | 8_1:+84774867 | None:intergenic |
| CTGCTGTCAGACTTGTTCAA+GGG | 0.614113 | 8_1:-84774248 | Msa1221230:CDS |
| TGGTACCCTCAGAGACAGCA+TGG | 0.632721 | 8_1:+84774179 | None:intergenic |
| CCACCGAAACCACTTCGGGG+CGG | 0.672099 | 8_1:-84774789 | Msa1221230:CDS |
| ATTCCACCGAAACCACTTCG+GGG | 0.693102 | 8_1:-84774792 | Msa1221230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAGGTTAGATATTCAA+CGG | - | chr8_1:84774259-84774278 | Msa1221230:CDS | 20.0% |
| !! | ATTAAATATGTCATTGTAGT+CGG | - | chr8_1:84774311-84774330 | Msa1221230:intron | 20.0% |
| !! | AGATTCAAACTCATTTAATA+TGG | - | chr8_1:84774455-84774474 | Msa1221230:intron | 20.0% |
| !!! | AATTTAGGTTAGATATTCAA+CGG | - | chr8_1:84774259-84774278 | Msa1221230:CDS | 20.0% |
| !! | ATTAAATATGTCATTGTAGT+CGG | - | chr8_1:84774311-84774330 | Msa1221230:intron | 20.0% |
| !! | AGATTCAAACTCATTTAATA+TGG | - | chr8_1:84774455-84774474 | Msa1221230:intron | 20.0% |
| ! | CTTGAAAATAATGAAAATGG+AGG | + | chr8_1:84774163-84774182 | None:intergenic | 25.0% |
| !! | CTCCATTTTCATTATTTTCA+AGG | - | chr8_1:84774161-84774180 | Msa1221230:CDS | 25.0% |
| ! | AGCCTTGAAAATAATGAAAA+TGG | + | chr8_1:84774166-84774185 | None:intergenic | 25.0% |
| ! | TCTAACCTAAATTACACATT+GGG | + | chr8_1:84774252-84774271 | None:intergenic | 25.0% |
| ! | ATCTAACCTAAATTACACAT+TGG | + | chr8_1:84774253-84774272 | None:intergenic | 25.0% |
| !! | ATTTAGGTTAGATATTCAAC+GGG | - | chr8_1:84774260-84774279 | Msa1221230:CDS | 25.0% |
| ! | AATGACATATTTAATGCGTT+TGG | + | chr8_1:84774306-84774325 | None:intergenic | 25.0% |
| ! | TTAAATATGTCATTGTAGTC+GGG | - | chr8_1:84774312-84774331 | Msa1221230:intron | 25.0% |
| !! | AGGACATTATAGTATTTTCA+CGG | + | chr8_1:84774813-84774832 | None:intergenic | 25.0% |
| !!! | AATATTTACCTCTGGTTTTT+GGG | - | chr8_1:84774852-84774871 | Msa1221230:CDS | 25.0% |
| !!! | AAAAAGTGTAAAACAGCTTT+TGG | - | chr8_1:84774910-84774929 | Msa1221230:intron | 25.0% |
| ! | CTTGAAAATAATGAAAATGG+AGG | + | chr8_1:84774163-84774182 | None:intergenic | 25.0% |
| !! | CTCCATTTTCATTATTTTCA+AGG | - | chr8_1:84774161-84774180 | Msa1221230:CDS | 25.0% |
| ! | AGCCTTGAAAATAATGAAAA+TGG | + | chr8_1:84774166-84774185 | None:intergenic | 25.0% |
| ! | TCTAACCTAAATTACACATT+GGG | + | chr8_1:84774252-84774271 | None:intergenic | 25.0% |
| ! | ATCTAACCTAAATTACACAT+TGG | + | chr8_1:84774253-84774272 | None:intergenic | 25.0% |
| !! | ATTTAGGTTAGATATTCAAC+GGG | - | chr8_1:84774260-84774279 | Msa1221230:CDS | 25.0% |
| ! | AATGACATATTTAATGCGTT+TGG | + | chr8_1:84774306-84774325 | None:intergenic | 25.0% |
| ! | TTAAATATGTCATTGTAGTC+GGG | - | chr8_1:84774312-84774331 | Msa1221230:intron | 25.0% |
| !! | AGGACATTATAGTATTTTCA+CGG | + | chr8_1:84774813-84774832 | None:intergenic | 25.0% |
| !!! | AATATTTACCTCTGGTTTTT+GGG | - | chr8_1:84774852-84774871 | Msa1221230:CDS | 25.0% |
| !!! | AAAAAGTGTAAAACAGCTTT+TGG | - | chr8_1:84774910-84774929 | Msa1221230:intron | 25.0% |
| ATTTAATATGGTATCAGAGC+CGG | - | chr8_1:84774467-84774486 | Msa1221230:intron | 30.0% | |
| AAAATTTGGACCATTAGATC+CGG | + | chr8_1:84774489-84774508 | None:intergenic | 30.0% | |
| AATGAGAAAAATCGGAATGA+GGG | + | chr8_1:84774610-84774629 | None:intergenic | 30.0% | |
| TACAAGCCAATGAGAAAAAT+CGG | + | chr8_1:84774618-84774637 | None:intergenic | 30.0% | |
| !!! | ATTTTTCTCATTGGCTTGTA+GGG | - | chr8_1:84774618-84774637 | Msa1221230:intron | 30.0% |
| ! | GACATTATAGTATTTTCACG+GGG | + | chr8_1:84774811-84774830 | None:intergenic | 30.0% |
| ! | GGACATTATAGTATTTTCAC+GGG | + | chr8_1:84774812-84774831 | None:intergenic | 30.0% |
| ! | TGAGTCTCTTTGAAAATGTA+AGG | + | chr8_1:84774833-84774852 | None:intergenic | 30.0% |
| !!! | CAATATTTACCTCTGGTTTT+TGG | - | chr8_1:84774851-84774870 | Msa1221230:CDS | 30.0% |
| CATCTCAATTCATTCATTCA+CGG | - | chr8_1:84775007-84775026 | Msa1221230:intron | 30.0% | |
| CTTGTATGGGTTTCAAATTT+GGG | + | chr8_1:84775115-84775134 | None:intergenic | 30.0% | |
| TCTTGTATGGGTTTCAAATT+TGG | + | chr8_1:84775116-84775135 | None:intergenic | 30.0% | |
| ! | AGTCTTGATGATTCTTGTAT+GGG | + | chr8_1:84775128-84775147 | None:intergenic | 30.0% |
| ! | AAGTCTTGATGATTCTTGTA+TGG | + | chr8_1:84775129-84775148 | None:intergenic | 30.0% |
| ! | CTATGTTATTGTTGTTGTTG+AGG | + | chr8_1:84775182-84775201 | None:intergenic | 30.0% |
| CAACAACAACAATAACATAG+AGG | - | chr8_1:84775182-84775201 | Msa1221230:intron | 30.0% | |
| !!! | AAAGTGTTCTGTTTTTACAG+AGG | - | chr8_1:84775226-84775245 | Msa1221230:intron | 30.0% |
| ATTTAATATGGTATCAGAGC+CGG | - | chr8_1:84774467-84774486 | Msa1221230:intron | 30.0% | |
| AAAATTTGGACCATTAGATC+CGG | + | chr8_1:84774489-84774508 | None:intergenic | 30.0% | |
| AATGAGAAAAATCGGAATGA+GGG | + | chr8_1:84774610-84774629 | None:intergenic | 30.0% | |
| TACAAGCCAATGAGAAAAAT+CGG | + | chr8_1:84774618-84774637 | None:intergenic | 30.0% | |
| !!! | ATTTTTCTCATTGGCTTGTA+GGG | - | chr8_1:84774618-84774637 | Msa1221230:intron | 30.0% |
| ! | GACATTATAGTATTTTCACG+GGG | + | chr8_1:84774811-84774830 | None:intergenic | 30.0% |
| ! | GGACATTATAGTATTTTCAC+GGG | + | chr8_1:84774812-84774831 | None:intergenic | 30.0% |
| ! | TGAGTCTCTTTGAAAATGTA+AGG | + | chr8_1:84774833-84774852 | None:intergenic | 30.0% |
| !!! | CAATATTTACCTCTGGTTTT+TGG | - | chr8_1:84774851-84774870 | Msa1221230:CDS | 30.0% |
| CATCTCAATTCATTCATTCA+CGG | - | chr8_1:84775007-84775026 | Msa1221230:intron | 30.0% | |
| CTTGTATGGGTTTCAAATTT+GGG | + | chr8_1:84775115-84775134 | None:intergenic | 30.0% | |
| TCTTGTATGGGTTTCAAATT+TGG | + | chr8_1:84775116-84775135 | None:intergenic | 30.0% | |
| ! | AGTCTTGATGATTCTTGTAT+GGG | + | chr8_1:84775128-84775147 | None:intergenic | 30.0% |
| ! | AAGTCTTGATGATTCTTGTA+TGG | + | chr8_1:84775129-84775148 | None:intergenic | 30.0% |
| ! | CTATGTTATTGTTGTTGTTG+AGG | + | chr8_1:84775182-84775201 | None:intergenic | 30.0% |
| CAACAACAACAATAACATAG+AGG | - | chr8_1:84775182-84775201 | Msa1221230:intron | 30.0% | |
| !!! | AAAGTGTTCTGTTTTTACAG+AGG | - | chr8_1:84775226-84775245 | Msa1221230:intron | 30.0% |
| GATTGCCCAATGTGTAATTT+AGG | - | chr8_1:84774244-84774263 | Msa1221230:CDS | 35.0% | |
| !! | TCAACGGGAGGTATTATAAA+TGG | - | chr8_1:84774275-84774294 | Msa1221230:CDS | 35.0% |
| !! | CAACGGGAGGTATTATAAAT+GGG | - | chr8_1:84774276-84774295 | Msa1221230:CDS | 35.0% |
| AAAAACTAGTTCAAAGAGCG+AGG | + | chr8_1:84774429-84774448 | None:intergenic | 35.0% | |
| !!! | TCGCTCTTTGAACTAGTTTT+TGG | - | chr8_1:84774428-84774447 | Msa1221230:intron | 35.0% |
| CAATGAGAAAAATCGGAATG+AGG | + | chr8_1:84774611-84774630 | None:intergenic | 35.0% | |
| ! | CTCATTCCGATTTTTCTCAT+TGG | - | chr8_1:84774609-84774628 | Msa1221230:intron | 35.0% |
| !!! | GATTTTTCTCATTGGCTTGT+AGG | - | chr8_1:84774617-84774636 | Msa1221230:intron | 35.0% |
| !!! | TTTTTCTCATTGGCTTGTAG+GGG | - | chr8_1:84774619-84774638 | Msa1221230:intron | 35.0% |
| GAAAAAATTCCCCGAAAATG+GGG | + | chr8_1:84774696-84774715 | None:intergenic | 35.0% | |
| GGAAAAAATTCCCCGAAAAT+GGG | + | chr8_1:84774697-84774716 | None:intergenic | 35.0% | |
| AGAGACTCAATATTTACCTC+TGG | - | chr8_1:84774844-84774863 | Msa1221230:CDS | 35.0% | |
| !! | GTAAAACAGCTTTTGGTTAG+TGG | - | chr8_1:84774917-84774936 | Msa1221230:intron | 35.0% |
| CGTGAATGAATGAATTGAGA+TGG | + | chr8_1:84775009-84775028 | None:intergenic | 35.0% | |
| TGAGAAAGTTGCAAGAGTAA+AGG | + | chr8_1:84775083-84775102 | None:intergenic | 35.0% | |
| TGTTGTTGAGGTTTGATTGT+TGG | + | chr8_1:84775170-84775189 | None:intergenic | 35.0% | |
| ACATAGAGGAACACATAAAC+AGG | - | chr8_1:84775196-84775215 | Msa1221230:intron | 35.0% | |
| TGTAAACTTAGTCACAGCTT+TGG | + | chr8_1:84775379-84775398 | None:intergenic | 35.0% | |
| GATTGCCCAATGTGTAATTT+AGG | - | chr8_1:84774244-84774263 | Msa1221230:CDS | 35.0% | |
| !! | TCAACGGGAGGTATTATAAA+TGG | - | chr8_1:84774275-84774294 | Msa1221230:CDS | 35.0% |
| !! | CAACGGGAGGTATTATAAAT+GGG | - | chr8_1:84774276-84774295 | Msa1221230:CDS | 35.0% |
| AAAAACTAGTTCAAAGAGCG+AGG | + | chr8_1:84774429-84774448 | None:intergenic | 35.0% | |
| !!! | TCGCTCTTTGAACTAGTTTT+TGG | - | chr8_1:84774428-84774447 | Msa1221230:intron | 35.0% |
| CAATGAGAAAAATCGGAATG+AGG | + | chr8_1:84774611-84774630 | None:intergenic | 35.0% | |
| ! | CTCATTCCGATTTTTCTCAT+TGG | - | chr8_1:84774609-84774628 | Msa1221230:intron | 35.0% |
| !!! | GATTTTTCTCATTGGCTTGT+AGG | - | chr8_1:84774617-84774636 | Msa1221230:intron | 35.0% |
| !!! | TTTTTCTCATTGGCTTGTAG+GGG | - | chr8_1:84774619-84774638 | Msa1221230:intron | 35.0% |
| GAAAAAATTCCCCGAAAATG+GGG | + | chr8_1:84774696-84774715 | None:intergenic | 35.0% | |
| GGAAAAAATTCCCCGAAAAT+GGG | + | chr8_1:84774697-84774716 | None:intergenic | 35.0% | |
| AGAGACTCAATATTTACCTC+TGG | - | chr8_1:84774844-84774863 | Msa1221230:CDS | 35.0% | |
| !! | GTAAAACAGCTTTTGGTTAG+TGG | - | chr8_1:84774917-84774936 | Msa1221230:intron | 35.0% |
| CGTGAATGAATGAATTGAGA+TGG | + | chr8_1:84775009-84775028 | None:intergenic | 35.0% | |
| TGAGAAAGTTGCAAGAGTAA+AGG | + | chr8_1:84775083-84775102 | None:intergenic | 35.0% | |
| TGTTGTTGAGGTTTGATTGT+TGG | + | chr8_1:84775170-84775189 | None:intergenic | 35.0% | |
| ACATAGAGGAACACATAAAC+AGG | - | chr8_1:84775196-84775215 | Msa1221230:intron | 35.0% | |
| TGTAAACTTAGTCACAGCTT+TGG | + | chr8_1:84775379-84775398 | None:intergenic | 35.0% | |
| !! | ATTATTTTCAAGGCTGACCC+AGG | - | chr8_1:84774171-84774190 | Msa1221230:CDS | 40.0% |
| ! | CTTAAAGCTCATGTCACTTC+AGG | + | chr8_1:84774207-84774226 | None:intergenic | 40.0% |
| CTGAAGTGACATGAGCTTTA+AGG | - | chr8_1:84774205-84774224 | Msa1221230:CDS | 40.0% | |
| TAGGTTAGATATTCAACGGG+AGG | - | chr8_1:84774263-84774282 | Msa1221230:CDS | 40.0% | |
| TCGGGTTAAAGATTGCATTG+CGG | - | chr8_1:84774330-84774349 | Msa1221230:intron | 40.0% | |
| CCAATGTCTACGGCAAAATT+TGG | + | chr8_1:84774503-84774522 | None:intergenic | 40.0% | |
| ! | CCAAATTTTGCCGTAGACAT+TGG | - | chr8_1:84774500-84774519 | Msa1221230:intron | 40.0% |
| ! | GAATGAGGGTGTGTTAAGAA+TGG | + | chr8_1:84774596-84774615 | None:intergenic | 40.0% |
| GTCAATGGGGATTTGCATAA+CGG | - | chr8_1:84774643-84774662 | Msa1221230:intron | 40.0% | |
| GGGAAAAAATTCCCCGAAAA+TGG | + | chr8_1:84774698-84774717 | None:intergenic | 40.0% | |
| ATATTCCACCGAAACCACTT+CGG | - | chr8_1:84774741-84774760 | Msa1221230:intron | 40.0% | |
| ! | TAGTATTTTCACGGGGATCA+GGG | + | chr8_1:84774804-84774823 | None:intergenic | 40.0% |
| ! | ATAGTATTTTCACGGGGATC+AGG | + | chr8_1:84774805-84774824 | None:intergenic | 40.0% |
| TGAAAAGTCCCAAAAACCAG+AGG | + | chr8_1:84774863-84774882 | None:intergenic | 40.0% | |
| GAGAGATCTTAGATCTGAGA+TGG | + | chr8_1:84774966-84774985 | None:intergenic | 40.0% | |
| GGAGAGAGAATGAATTGAGA+TGG | + | chr8_1:84774988-84775007 | None:intergenic | 40.0% | |
| ! | TCTGGCTTAGGAATTTGAGA+TGG | + | chr8_1:84775054-84775073 | None:intergenic | 40.0% |
| GAAAGTTGCAAGAGTAAAGG+TGG | + | chr8_1:84775080-84775099 | None:intergenic | 40.0% | |
| !! | ATTATTTTCAAGGCTGACCC+AGG | - | chr8_1:84774171-84774190 | Msa1221230:CDS | 40.0% |
| ! | CTTAAAGCTCATGTCACTTC+AGG | + | chr8_1:84774207-84774226 | None:intergenic | 40.0% |
| CTGAAGTGACATGAGCTTTA+AGG | - | chr8_1:84774205-84774224 | Msa1221230:CDS | 40.0% | |
| TAGGTTAGATATTCAACGGG+AGG | - | chr8_1:84774263-84774282 | Msa1221230:CDS | 40.0% | |
| TCGGGTTAAAGATTGCATTG+CGG | - | chr8_1:84774330-84774349 | Msa1221230:intron | 40.0% | |
| CCAATGTCTACGGCAAAATT+TGG | + | chr8_1:84774503-84774522 | None:intergenic | 40.0% | |
| ! | CCAAATTTTGCCGTAGACAT+TGG | - | chr8_1:84774500-84774519 | Msa1221230:intron | 40.0% |
| ! | GAATGAGGGTGTGTTAAGAA+TGG | + | chr8_1:84774596-84774615 | None:intergenic | 40.0% |
| GTCAATGGGGATTTGCATAA+CGG | - | chr8_1:84774643-84774662 | Msa1221230:intron | 40.0% | |
| GGGAAAAAATTCCCCGAAAA+TGG | + | chr8_1:84774698-84774717 | None:intergenic | 40.0% | |
| ATATTCCACCGAAACCACTT+CGG | - | chr8_1:84774741-84774760 | Msa1221230:intron | 40.0% | |
| ! | TAGTATTTTCACGGGGATCA+GGG | + | chr8_1:84774804-84774823 | None:intergenic | 40.0% |
| ! | ATAGTATTTTCACGGGGATC+AGG | + | chr8_1:84774805-84774824 | None:intergenic | 40.0% |
| TGAAAAGTCCCAAAAACCAG+AGG | + | chr8_1:84774863-84774882 | None:intergenic | 40.0% | |
| GAGAGATCTTAGATCTGAGA+TGG | + | chr8_1:84774966-84774985 | None:intergenic | 40.0% | |
| GGAGAGAGAATGAATTGAGA+TGG | + | chr8_1:84774988-84775007 | None:intergenic | 40.0% | |
| ! | TCTGGCTTAGGAATTTGAGA+TGG | + | chr8_1:84775054-84775073 | None:intergenic | 40.0% |
| GAAAGTTGCAAGAGTAAAGG+TGG | + | chr8_1:84775080-84775099 | None:intergenic | 40.0% | |
| CTTCAGGACTCATCTTACCT+GGG | + | chr8_1:84774191-84774210 | None:intergenic | 45.0% | |
| ACTTCAGGACTCATCTTACC+TGG | + | chr8_1:84774192-84774211 | None:intergenic | 45.0% | |
| ACTAGTTCAAAGAGCGAGGA+TGG | + | chr8_1:84774425-84774444 | None:intergenic | 45.0% | |
| AACCTCTGCTCCAATGTCTA+CGG | + | chr8_1:84774513-84774532 | None:intergenic | 45.0% | |
| !! | TTGGAGCAGAGGTTGTTTCT+AGG | - | chr8_1:84774519-84774538 | Msa1221230:intron | 45.0% |
| !! | CAGAGGTTGTTTCTAGGAGA+CGG | - | chr8_1:84774525-84774544 | Msa1221230:intron | 45.0% |
| TATTCCACCGAAACCACTTC+GGG | - | chr8_1:84774742-84774761 | Msa1221230:intron | 45.0% | |
| ! | TAAAGGTGGATGTCTGGCTT+AGG | + | chr8_1:84775066-84775085 | None:intergenic | 45.0% |
| CAAGAGTAAAGGTGGATGTC+TGG | + | chr8_1:84775072-84775091 | None:intergenic | 45.0% | |
| ! | ACTGCTGTCAGACTTGTTCA+AGG | - | chr8_1:84775286-84775305 | Msa1221230:intron | 45.0% |
| ! | CTGCTGTCAGACTTGTTCAA+GGG | - | chr8_1:84775287-84775306 | Msa1221230:intron | 45.0% |
| ACCTGTTCTTCCTGGTGAAT+TGG | - | chr8_1:84775329-84775348 | Msa1221230:intron | 45.0% | |
| CTTCAGGACTCATCTTACCT+GGG | + | chr8_1:84774191-84774210 | None:intergenic | 45.0% | |
| ACTTCAGGACTCATCTTACC+TGG | + | chr8_1:84774192-84774211 | None:intergenic | 45.0% | |
| ACTAGTTCAAAGAGCGAGGA+TGG | + | chr8_1:84774425-84774444 | None:intergenic | 45.0% | |
| AACCTCTGCTCCAATGTCTA+CGG | + | chr8_1:84774513-84774532 | None:intergenic | 45.0% | |
| !! | TTGGAGCAGAGGTTGTTTCT+AGG | - | chr8_1:84774519-84774538 | Msa1221230:intron | 45.0% |
| !! | CAGAGGTTGTTTCTAGGAGA+CGG | - | chr8_1:84774525-84774544 | Msa1221230:intron | 45.0% |
| TATTCCACCGAAACCACTTC+GGG | - | chr8_1:84774742-84774761 | Msa1221230:intron | 45.0% | |
| ! | TAAAGGTGGATGTCTGGCTT+AGG | + | chr8_1:84775066-84775085 | None:intergenic | 45.0% |
| CAAGAGTAAAGGTGGATGTC+TGG | + | chr8_1:84775072-84775091 | None:intergenic | 45.0% | |
| ! | ACTGCTGTCAGACTTGTTCA+AGG | - | chr8_1:84775286-84775305 | Msa1221230:intron | 45.0% |
| ! | CTGCTGTCAGACTTGTTCAA+GGG | - | chr8_1:84775287-84775306 | Msa1221230:intron | 45.0% |
| ACCTGTTCTTCCTGGTGAAT+TGG | - | chr8_1:84775329-84775348 | Msa1221230:intron | 45.0% | |
| GGTATCAGAGCCGGATCTAA+TGG | - | chr8_1:84774476-84774495 | Msa1221230:intron | 50.0% | |
| AGACGGTTACAAGCGTGACT+CGG | - | chr8_1:84774542-84774561 | Msa1221230:intron | 50.0% | |
| CTCGGCGTTACTCATTCTCA+AGG | - | chr8_1:84774560-84774579 | Msa1221230:intron | 50.0% | |
| !! | TTGGCTTGTAGGGGTGTCAA+TGG | - | chr8_1:84774628-84774647 | Msa1221230:intron | 50.0% |
| !! | TGGCTTGTAGGGGTGTCAAT+GGG | - | chr8_1:84774629-84774648 | Msa1221230:intron | 50.0% |
| !!! | TTCGGGGAATTTTTTCCCCG+TGG | - | chr8_1:84774700-84774719 | Msa1221230:intron | 50.0% |
| !!! | TCGGGGAATTTTTTCCCCGT+GGG | - | chr8_1:84774701-84774720 | Msa1221230:intron | 50.0% |
| ATTCCACCGAAACCACTTCG+GGG | - | chr8_1:84774743-84774762 | Msa1221230:intron | 50.0% | |
| GCCAATTCACCAGGAAGAAC+AGG | + | chr8_1:84775333-84775352 | None:intergenic | 50.0% | |
| ! | GCATGGTTAGCCAATTCACC+AGG | + | chr8_1:84775342-84775361 | None:intergenic | 50.0% |
| GCTAACCATGCTGTCTCTGA+GGG | - | chr8_1:84775351-84775370 | Msa1221230:intron | 50.0% | |
| GGTATCAGAGCCGGATCTAA+TGG | - | chr8_1:84774476-84774495 | Msa1221230:intron | 50.0% | |
| AGACGGTTACAAGCGTGACT+CGG | - | chr8_1:84774542-84774561 | Msa1221230:intron | 50.0% | |
| CTCGGCGTTACTCATTCTCA+AGG | - | chr8_1:84774560-84774579 | Msa1221230:intron | 50.0% | |
| !! | TTGGCTTGTAGGGGTGTCAA+TGG | - | chr8_1:84774628-84774647 | Msa1221230:intron | 50.0% |
| !! | TGGCTTGTAGGGGTGTCAAT+GGG | - | chr8_1:84774629-84774648 | Msa1221230:intron | 50.0% |
| !!! | TTCGGGGAATTTTTTCCCCG+TGG | - | chr8_1:84774700-84774719 | Msa1221230:intron | 50.0% |
| !!! | TCGGGGAATTTTTTCCCCGT+GGG | - | chr8_1:84774701-84774720 | Msa1221230:intron | 50.0% |
| ATTCCACCGAAACCACTTCG+GGG | - | chr8_1:84774743-84774762 | Msa1221230:intron | 50.0% | |
| GCCAATTCACCAGGAAGAAC+AGG | + | chr8_1:84775333-84775352 | None:intergenic | 50.0% | |
| ! | GCATGGTTAGCCAATTCACC+AGG | + | chr8_1:84775342-84775361 | None:intergenic | 50.0% |
| GCTAACCATGCTGTCTCTGA+GGG | - | chr8_1:84775351-84775370 | Msa1221230:intron | 50.0% | |
| TGCCGTAGACATTGGAGCAG+AGG | - | chr8_1:84774508-84774527 | Msa1221230:intron | 55.0% | |
| !! | GGCTTGTAGGGGTGTCAATG+GGG | - | chr8_1:84774630-84774649 | Msa1221230:intron | 55.0% |
| !!! | CGGGGAATTTTTTCCCCGTG+GGG | - | chr8_1:84774702-84774721 | Msa1221230:intron | 55.0% |
| !!! | GGGGAATTTTTTCCCCGTGG+GGG | - | chr8_1:84774703-84774722 | Msa1221230:intron | 55.0% |
| !!! | GAATTTTTTCCCCGTGGGGG+CGG | - | chr8_1:84774706-84774725 | Msa1221230:intron | 55.0% |
| !!! | AATTTTTTCCCCGTGGGGGC+GGG | - | chr8_1:84774707-84774726 | Msa1221230:intron | 55.0% |
| GCTGTCAGACCTGTTCTTCC+TGG | - | chr8_1:84775321-84775340 | Msa1221230:intron | 55.0% | |
| GGCTAACCATGCTGTCTCTG+AGG | - | chr8_1:84775350-84775369 | Msa1221230:intron | 55.0% | |
| TGGTACCCTCAGAGACAGCA+TGG | + | chr8_1:84775359-84775378 | None:intergenic | 55.0% | |
| TGCCGTAGACATTGGAGCAG+AGG | - | chr8_1:84774508-84774527 | Msa1221230:intron | 55.0% | |
| !! | GGCTTGTAGGGGTGTCAATG+GGG | - | chr8_1:84774630-84774649 | Msa1221230:intron | 55.0% |
| !!! | CGGGGAATTTTTTCCCCGTG+GGG | - | chr8_1:84774702-84774721 | Msa1221230:intron | 55.0% |
| !!! | GGGGAATTTTTTCCCCGTGG+GGG | - | chr8_1:84774703-84774722 | Msa1221230:intron | 55.0% |
| !!! | GAATTTTTTCCCCGTGGGGG+CGG | - | chr8_1:84774706-84774725 | Msa1221230:intron | 55.0% |
| !!! | AATTTTTTCCCCGTGGGGGC+GGG | - | chr8_1:84774707-84774726 | Msa1221230:intron | 55.0% |
| GCTGTCAGACCTGTTCTTCC+TGG | - | chr8_1:84775321-84775340 | Msa1221230:intron | 55.0% | |
| GGCTAACCATGCTGTCTCTG+AGG | - | chr8_1:84775350-84775369 | Msa1221230:intron | 55.0% | |
| TGGTACCCTCAGAGACAGCA+TGG | + | chr8_1:84775359-84775378 | None:intergenic | 55.0% | |
| TTGCATAACGGTTCCCCGCG+AGG | - | chr8_1:84774655-84774674 | Msa1221230:intron | 60.0% | |
| !!! | ATTTTTTCCCCGTGGGGGCG+GGG | - | chr8_1:84774708-84774727 | Msa1221230:intron | 60.0% |
| TTGCATAACGGTTCCCCGCG+AGG | - | chr8_1:84774655-84774674 | Msa1221230:intron | 60.0% | |
| !!! | ATTTTTTCCCCGTGGGGGCG+GGG | - | chr8_1:84774708-84774727 | Msa1221230:intron | 60.0% |
| CGAAAATGGGGCCCCGAACG+GGG | + | chr8_1:84774684-84774703 | None:intergenic | 65.0% | |
| CCGAAAATGGGGCCCCGAAC+GGG | + | chr8_1:84774685-84774704 | None:intergenic | 65.0% | |
| ! | CCCGTTCGGGGCCCCATTTT+CGG | - | chr8_1:84774682-84774701 | Msa1221230:intron | 65.0% |
| CCCGAAAATGGGGCCCCGAA+CGG | + | chr8_1:84774686-84774705 | None:intergenic | 65.0% | |
| ! | CCGTTCGGGGCCCCATTTTC+GGG | - | chr8_1:84774683-84774702 | Msa1221230:intron | 65.0% |
| ! | CGTTCGGGGCCCCATTTTCG+GGG | - | chr8_1:84774684-84774703 | Msa1221230:intron | 65.0% |
| CCACCGAAACCACTTCGGGG+CGG | - | chr8_1:84774746-84774765 | Msa1221230:CDS | 65.0% | |
| CACCGAAACCACTTCGGGGC+GGG | - | chr8_1:84774747-84774766 | Msa1221230:CDS | 65.0% | |
| ACCGAAACCACTTCGGGGCG+GGG | - | chr8_1:84774748-84774767 | Msa1221230:CDS | 65.0% | |
| TCCCCGCCCCGAAGTGGTTT+CGG | + | chr8_1:84774752-84774771 | None:intergenic | 65.0% | |
| AACCACTTCGGGGCGGGGAT+CGG | - | chr8_1:84774753-84774772 | Msa1221230:CDS | 65.0% | |
| ATCAGGGAATCCGCAGGGCG+GGG | + | chr8_1:84774788-84774807 | None:intergenic | 65.0% | |
| GATCAGGGAATCCGCAGGGC+GGG | + | chr8_1:84774789-84774808 | None:intergenic | 65.0% | |
| GGATCAGGGAATCCGCAGGG+CGG | + | chr8_1:84774790-84774809 | None:intergenic | 65.0% | |
| CGGGGATCAGGGAATCCGCA+GGG | + | chr8_1:84774793-84774812 | None:intergenic | 65.0% | |
| ACGGGGATCAGGGAATCCGC+AGG | + | chr8_1:84774794-84774813 | None:intergenic | 65.0% | |
| CGAAAATGGGGCCCCGAACG+GGG | + | chr8_1:84774684-84774703 | None:intergenic | 65.0% | |
| CCGAAAATGGGGCCCCGAAC+GGG | + | chr8_1:84774685-84774704 | None:intergenic | 65.0% | |
| ! | CCCGTTCGGGGCCCCATTTT+CGG | - | chr8_1:84774682-84774701 | Msa1221230:intron | 65.0% |
| CCCGAAAATGGGGCCCCGAA+CGG | + | chr8_1:84774686-84774705 | None:intergenic | 65.0% | |
| ! | CCGTTCGGGGCCCCATTTTC+GGG | - | chr8_1:84774683-84774702 | Msa1221230:intron | 65.0% |
| ! | CGTTCGGGGCCCCATTTTCG+GGG | - | chr8_1:84774684-84774703 | Msa1221230:intron | 65.0% |
| CCACCGAAACCACTTCGGGG+CGG | - | chr8_1:84774746-84774765 | Msa1221230:CDS | 65.0% | |
| CACCGAAACCACTTCGGGGC+GGG | - | chr8_1:84774747-84774766 | Msa1221230:CDS | 65.0% | |
| ACCGAAACCACTTCGGGGCG+GGG | - | chr8_1:84774748-84774767 | Msa1221230:CDS | 65.0% | |
| TCCCCGCCCCGAAGTGGTTT+CGG | + | chr8_1:84774752-84774771 | None:intergenic | 65.0% | |
| AACCACTTCGGGGCGGGGAT+CGG | - | chr8_1:84774753-84774772 | Msa1221230:CDS | 65.0% | |
| ATCAGGGAATCCGCAGGGCG+GGG | + | chr8_1:84774788-84774807 | None:intergenic | 65.0% | |
| GATCAGGGAATCCGCAGGGC+GGG | + | chr8_1:84774789-84774808 | None:intergenic | 65.0% | |
| GGATCAGGGAATCCGCAGGG+CGG | + | chr8_1:84774790-84774809 | None:intergenic | 65.0% | |
| CGGGGATCAGGGAATCCGCA+GGG | + | chr8_1:84774793-84774812 | None:intergenic | 65.0% | |
| ACGGGGATCAGGGAATCCGC+AGG | + | chr8_1:84774794-84774813 | None:intergenic | 65.0% | |
| CCGAACGGGGAATCCTCGCG+GGG | + | chr8_1:84774671-84774690 | None:intergenic | 70.0% | |
| CCCCGCGAGGATTCCCCGTT+CGG | - | chr8_1:84774668-84774687 | Msa1221230:intron | 70.0% | |
| CCCGAACGGGGAATCCTCGC+GGG | + | chr8_1:84774672-84774691 | None:intergenic | 70.0% | |
| CCCGCGAGGATTCCCCGTTC+GGG | - | chr8_1:84774669-84774688 | Msa1221230:intron | 70.0% | |
| CCCCGAACGGGGAATCCTCG+CGG | + | chr8_1:84774673-84774692 | None:intergenic | 70.0% | |
| CCGCGAGGATTCCCCGTTCG+GGG | - | chr8_1:84774670-84774689 | Msa1221230:intron | 70.0% | |
| CCGCCCCGAAGTGGTTTCGG+TGG | + | chr8_1:84774749-84774768 | None:intergenic | 70.0% | |
| ACCACTTCGGGGCGGGGATC+GGG | - | chr8_1:84774754-84774773 | Msa1221230:CDS | 70.0% | |
| !! | GGGAAGTATCCCCCGCCCTG+CGG | - | chr8_1:84774775-84774794 | Msa1221230:CDS | 70.0% |
| TCAGGGAATCCGCAGGGCGG+GGG | + | chr8_1:84774787-84774806 | None:intergenic | 70.0% | |
| CCGAACGGGGAATCCTCGCG+GGG | + | chr8_1:84774671-84774690 | None:intergenic | 70.0% | |
| CCCCGCGAGGATTCCCCGTT+CGG | - | chr8_1:84774668-84774687 | Msa1221230:intron | 70.0% | |
| CCCGAACGGGGAATCCTCGC+GGG | + | chr8_1:84774672-84774691 | None:intergenic | 70.0% | |
| CCCGCGAGGATTCCCCGTTC+GGG | - | chr8_1:84774669-84774688 | Msa1221230:intron | 70.0% | |
| CCCCGAACGGGGAATCCTCG+CGG | + | chr8_1:84774673-84774692 | None:intergenic | 70.0% | |
| CCGCGAGGATTCCCCGTTCG+GGG | - | chr8_1:84774670-84774689 | Msa1221230:intron | 70.0% | |
| CCGCCCCGAAGTGGTTTCGG+TGG | + | chr8_1:84774749-84774768 | None:intergenic | 70.0% | |
| ACCACTTCGGGGCGGGGATC+GGG | - | chr8_1:84774754-84774773 | Msa1221230:CDS | 70.0% | |
| !! | GGGAAGTATCCCCCGCCCTG+CGG | - | chr8_1:84774775-84774794 | Msa1221230:CDS | 70.0% |
| TCAGGGAATCCGCAGGGCGG+GGG | + | chr8_1:84774787-84774806 | None:intergenic | 70.0% | |
| TTTCCCCGTGGGGGCGGGGA+CGG | - | chr8_1:84774712-84774731 | Msa1221230:intron | 75.0% | |
| CCACTTCGGGGCGGGGATCG+GGG | - | chr8_1:84774755-84774774 | Msa1221230:CDS | 75.0% | |
| TTTCCCCGTGGGGGCGGGGA+CGG | - | chr8_1:84774712-84774731 | Msa1221230:intron | 75.0% | |
| CCACTTCGGGGCGGGGATCG+GGG | - | chr8_1:84774755-84774774 | Msa1221230:CDS | 75.0% | |
| ! | TTCCCCGTGGGGGCGGGGAC+GGG | - | chr8_1:84774713-84774732 | Msa1221230:intron | 80.0% |
| ! | TCTCCCCGTCCCCGCCCCCA+CGG | + | chr8_1:84774720-84774739 | None:intergenic | 80.0% |
| ! | CCCCGATCCCCGCCCCGAAG+TGG | + | chr8_1:84774758-84774777 | None:intergenic | 80.0% |
| ! | TTCCCCGTGGGGGCGGGGAC+GGG | - | chr8_1:84774713-84774732 | Msa1221230:intron | 80.0% |
| ! | TCTCCCCGTCCCCGCCCCCA+CGG | + | chr8_1:84774720-84774739 | None:intergenic | 80.0% |
| ! | CCCCGATCCCCGCCCCGAAG+TGG | + | chr8_1:84774758-84774777 | None:intergenic | 80.0% |
| ! | TCCCCGTGGGGGCGGGGACG+GGG | - | chr8_1:84774714-84774733 | Msa1221230:intron | 85.0% |
| ! | TCCCCGTCCCCGCCCCCACG+GGG | + | chr8_1:84774718-84774737 | None:intergenic | 85.0% |
| ! | CTCCCCGTCCCCGCCCCCAC+GGG | + | chr8_1:84774719-84774738 | None:intergenic | 85.0% |
| ! | TCCCCGTGGGGGCGGGGACG+GGG | - | chr8_1:84774714-84774733 | Msa1221230:intron | 85.0% |
| ! | TCCCCGTCCCCGCCCCCACG+GGG | + | chr8_1:84774718-84774737 | None:intergenic | 85.0% |
| ! | CTCCCCGTCCCCGCCCCCAC+GGG | + | chr8_1:84774719-84774738 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84774150 | 84775407 | 84774150 | ID=Msa1221230;Name=Msa1221230 |
| chr8_1 | mRNA | 84774150 | 84775407 | 84774150 | ID=Msa1221230-mRNA-1;Parent=Msa1221230;Name=Msa1221230-mRNA-1;_AED=0.71;_eAED=0.71;_QI=0|0|0|0.33|0|0|3|0|125 |
| chr8_1 | exon | 84775365 | 84775407 | 84775365 | ID=Msa1221230-mRNA-1:exon:30461;Parent=Msa1221230-mRNA-1 |
| chr8_1 | exon | 84774746 | 84774918 | 84774746 | ID=Msa1221230-mRNA-1:exon:30460;Parent=Msa1221230-mRNA-1 |
| chr8_1 | exon | 84774150 | 84774311 | 84774150 | ID=Msa1221230-mRNA-1:exon:30459;Parent=Msa1221230-mRNA-1 |
| chr8_1 | CDS | 84775365 | 84775407 | 84775365 | ID=Msa1221230-mRNA-1:cds;Parent=Msa1221230-mRNA-1 |
| chr8_1 | CDS | 84774746 | 84774918 | 84774746 | ID=Msa1221230-mRNA-1:cds;Parent=Msa1221230-mRNA-1 |
| chr8_1 | CDS | 84774150 | 84774311 | 84774150 | ID=Msa1221230-mRNA-1:cds;Parent=Msa1221230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
