AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1224120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224120 MtrunA17_Chr4g0075261 96.207 870 33 0 1 870 1 870 0.0 1748
Msa1224120 MtrunA17_Chr2g0289121 59.974 777 248 14 107 870 99 825 0.0 885
Msa1224120 MtrunA17_Chr1g0211711 47.410 753 315 17 157 864 332 1048 0.0 658
Msa1224120 MtrunA17_Chr1g0183311 48.257 746 327 16 168 864 144 879 0.0 632
Msa1224120 MtrunA17_Chr7g0275771 42.623 793 355 16 168 866 140 926 0.0 619
Msa1224120 MtrunA17_Chr5g0426961 45.867 750 310 16 161 864 133 832 0.0 603
Msa1224120 MtrunA17_Chr2g0289031 62.037 432 118 4 438 868 11 397 0.0 527
Msa1224120 MtrunA17_Chr1g0211661 42.939 701 307 16 154 807 211 865 1.74e-173 525
Msa1224120 MtrunA17_Chr5g0420361 44.923 650 283 17 247 848 157 779 1.14e-169 512
Msa1224120 MtrunA17_Chr1g0192011 36.813 728 405 12 166 867 265 963 1.37e-158 489
Msa1224120 MtrunA17_Chr6g0472441 41.541 662 292 19 235 848 87 701 1.70e-148 455
Msa1224120 MtrunA17_Chr1g0211691 40.881 658 297 15 152 755 326 945 2.48e-139 438
Msa1224120 MtrunA17_Chr1g0147021 44.874 517 231 11 167 651 869 1363 3.14e-126 417
Msa1224120 MtrunA17_Chr1g0147021 68.874 151 47 0 718 868 1549 1699 4.07e-61 226
Msa1224120 MtrunA17_Chr2g0281051 33.123 794 441 18 144 866 182 956 6.85e-125 400
Msa1224120 MtrunA17_Chr5g0448301 39.785 558 228 16 263 777 139 631 2.71e-104 336
Msa1224120 MtrunA17_Chr4g0048531 36.380 558 280 13 378 866 727 1278 4.64e-97 330
Msa1224120 MtrunA17_Chr4g0048531 35.081 248 138 8 166 395 258 500 5.40e-34 141
Msa1224120 MtrunA17_Chr2g0289041 67.647 204 63 2 188 388 1 204 7.80e-89 280
Msa1224120 MtrunA17_Chr8g0361381 60.541 185 68 1 434 618 29 208 1.76e-72 237
Msa1224120 MtrunA17_Chr2g0289091 61.579 190 58 5 644 829 242 420 1.83e-62 217
Msa1224120 MtrunA17_Chr2g0289091 69.065 139 43 0 507 645 20 158 1.43e-58 206
Msa1224120 MtrunA17_Chr8g0361391 55.191 183 34 4 688 870 26 160 8.53e-56 189
Msa1224120 MtrunA17_Chr1g0211701 70.536 112 33 0 753 864 4 115 3.83e-51 176
Msa1224120 MtrunA17_Chr7g0231061 49.733 187 82 2 478 660 1 179 2.18e-50 176
Msa1224120 MtrunA17_Chr2g0289101 61.475 122 44 2 296 414 8 129 6.06e-43 153
Msa1224120 MtrunA17_Chr8g0340381 66.667 90 26 2 528 617 33 118 5.36e-31 120
Msa1224120 MtrunA17_Chr8g0364421 32.273 220 121 7 279 482 10 217 3.14e-21 93.6
Msa1224120 MtrunA17_Chr8g0364411 37.097 124 74 4 155 275 21 143 1.01e-17 80.9
Msa1224120 MtrunA17_Chr1g0211671 54.237 59 27 0 806 864 15 73 1.57e-15 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224120 AT1G62310.1 56.148 732 255 9 147 847 181 877 0.0 808
Msa1224120 AT1G11950.1 55.263 722 258 8 168 867 193 871 0.0 808
Msa1224120 AT1G11950.3 55.263 722 258 8 168 867 193 871 0.0 808
Msa1224120 AT1G11950.2 52.454 652 245 8 168 797 193 801 0.0 684
Msa1224120 AT4G00990.1 43.025 767 362 18 168 870 80 835 0.0 566
Msa1224120 AT4G00990.3 41.690 710 339 18 168 813 80 778 5.72e-162 492
Msa1224120 AT4G00990.2 42.023 702 332 18 168 805 80 770 2.47e-161 490
Msa1224120 AT3G07610.1 48.814 506 189 8 388 865 429 892 9.11e-145 454
Msa1224120 AT3G07610.1 43.316 187 100 5 168 349 155 340 2.39e-38 155
Msa1224120 AT3G07610.3 46.476 525 195 9 388 865 429 914 5.12e-137 434
Msa1224120 AT3G07610.3 43.316 187 100 5 168 349 155 340 2.56e-38 155
Msa1224120 AT1G09060.2 33.612 717 430 14 168 867 206 893 6.52e-125 399
Msa1224120 AT1G09060.1 33.612 717 430 14 168 867 206 893 6.52e-125 399
Msa1224120 AT1G09060.4 33.612 717 430 14 168 867 220 907 8.80e-125 399
Msa1224120 AT1G09060.3 33.612 717 430 14 168 867 220 907 8.80e-125 399
Msa1224120 AT4G21430.1 29.679 748 441 15 156 866 215 914 3.24e-90 306
Msa1224120 AT3G07610.2 44.565 276 118 5 372 619 419 687 5.70e-62 224
Msa1224120 AT3G07610.2 43.316 187 100 5 168 349 155 340 4.57e-38 153

Find 197 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACTCGTATGTTCTTTAA+AGG 0.110692 8_1:+88845485 Msa1224120:CDS
TTCTCTAGCTTTGTGTTTCT+TGG 0.148326 8_1:-88847188 None:intergenic
CTCGCAGTATGCTGAAAATT+TGG 0.155349 8_1:+88844744 Msa1224120:CDS
CCATGTTCTAAAACCTGATA+TGG 0.202757 8_1:+88845694 Msa1224120:CDS
TTTGAGGCAGCATGCTTCTT+TGG 0.209357 8_1:-88843340 None:intergenic
AGAACATCACGAACAATAAT+TGG 0.212049 8_1:-88844884 None:intergenic
AAGAAAAGTATTATCAATTA+TGG 0.214358 8_1:+88847693 Msa1224120:three_prime_UTR
ACAGTTTCACAAGAAAATTT+TGG 0.236784 8_1:+88843190 Msa1224120:CDS
TCTGGATGCGCAAAAGCTTT+TGG 0.237412 8_1:+88843067 Msa1224120:CDS
CAAAGCTCATAGGAACAATT+TGG 0.255616 8_1:-88844440 None:intergenic
TCATGCACTGATGACATTTC+CGG 0.257622 8_1:-88843619 None:intergenic
CAGAGAACATATAGAAAATA+AGG 0.299885 8_1:+88846438 Msa1224120:CDS
TCGGTGATCCTCCAGGTTGC+TGG 0.309818 8_1:+88847493 Msa1224120:three_prime_UTR
TGTCGCAAGGTCGACCATTT+AGG 0.315353 8_1:-88846414 None:intergenic
GAAGTTCCAATATGTGAATA+GGG 0.316073 8_1:+88844517 Msa1224120:CDS
TGACAAATTTGTTTCAGATA+TGG 0.324144 8_1:-88844120 None:intergenic
ACTTCTTCTATAGACATATC+AGG 0.326397 8_1:-88843837 None:intergenic
AGGGCTGATGTATGCCTAAA+TGG 0.327833 8_1:+88846400 Msa1224120:CDS
TGATTGCCTGTATTTCCTTT+TGG 0.333565 8_1:-88847724 None:intergenic
ATGTCATCAGTGCATGAAAA+AGG 0.335195 8_1:+88843625 Msa1224120:CDS
AAGTTTCTGTTTCTTCTTTG+AGG 0.339318 8_1:-88843356 None:intergenic
AAGAAGTTGAAGGAGGAGTT+TGG 0.343772 8_1:+88846828 Msa1224120:CDS
CATGCACTGATGACATTTCC+GGG 0.344655 8_1:-88843618 None:intergenic
GCGTTCAAAAGGAACAATTA+AGG 0.347282 8_1:+88843911 Msa1224120:CDS
TGAAGTTCCAATATGTGAAT+AGG 0.348367 8_1:+88844516 Msa1224120:CDS
AATAAATTCTTCACAATGTC+GGG 0.349503 8_1:-88845600 None:intergenic
AGAAGGAAAAGGAAATACTA+TGG 0.362427 8_1:+88843150 Msa1224120:CDS
CATAGCCCCTATTCACATAT+TGG 0.366484 8_1:-88844523 None:intergenic
TCTCTAGCTTTGTGTTTCTT+GGG 0.369110 8_1:-88847187 None:intergenic
ATACAGTGTCCTTGTGTTTG+TGG 0.373523 8_1:+88847751 Msa1224120:three_prime_UTR
GGTATTAGAGTGCAACAATA+TGG 0.378136 8_1:+88846462 Msa1224120:CDS
GAAAACACTCGAAAGAATTC+AGG 0.382065 8_1:+88846644 Msa1224120:CDS
CATTATAATACCTGCTCAAC+CGG 0.384038 8_1:-88846682 None:intergenic
AACAATTCAGTAAAGCTTCT+AGG 0.385507 8_1:-88847421 None:intergenic
GAAAATGAAACAATGGTAAC+AGG 0.395384 8_1:+88846562 Msa1224120:CDS
GTGCCCTGTGGGATATATTT+CGG 0.395741 8_1:+88846587 Msa1224120:CDS
TCTCTTCTTAGATGCTAGAT+TGG 0.395903 8_1:-88843311 None:intergenic
CTGGGAGTGTAAACAGCGTT+CGG 0.400054 8_1:+88847512 Msa1224120:three_prime_UTR
TGTGTTTGTGGTTATTTAGA+AGG 0.400941 8_1:+88847763 Msa1224120:three_prime_UTR
TTAATAATACCTCCGCTGTA+TGG 0.402466 8_1:-88846297 None:intergenic
GAGGATATGTTGAAGTTCTC+TGG 0.404767 8_1:+88843049 Msa1224120:CDS
TCTGTGTGCTTCTTTCAAAT+TGG 0.411095 8_1:-88846344 None:intergenic
AAAAGGGCATAAAGATGTTC+TGG 0.411429 8_1:+88843270 Msa1224120:CDS
TTGTCACTACAGAGACTTTG+TGG 0.411737 8_1:-88844282 None:intergenic
TCGCAGTATGCTGAAAATTT+GGG 0.419890 8_1:+88844745 Msa1224120:CDS
CGGAGGTATTATTAACTGAT+AGG 0.429669 8_1:+88846305 Msa1224120:CDS
TAGTTGTGTCCCAAAAGAAA+TGG 0.431073 8_1:+88844646 Msa1224120:CDS
CTCTTCTTAGATGCTAGATT+GGG 0.431195 8_1:-88843310 None:intergenic
CATACCGATACAAATTCAAA+AGG 0.431375 8_1:+88843253 Msa1224120:CDS
AGAGAGGACACTGAAAAGTT+AGG 0.433154 8_1:+88846610 Msa1224120:CDS
ACATTTGAGGCAAAGCTCAT+AGG 0.433228 8_1:-88844450 None:intergenic
TCATATTCATTCATATGATC+AGG 0.436372 8_1:+88842063 Msa1224120:five_prime_UTR
CCAGCCCGAGGATCAGTATA+CGG 0.441774 8_1:-88845641 None:intergenic
TCCTTAGTCGGTGATCCTCC+AGG 0.443269 8_1:+88847486 Msa1224120:three_prime_UTR
AGGCATACATCAGCCCTCTC+TGG 0.443538 8_1:-88846394 None:intergenic
TGTTGATTCTACAGTAAGAA+TGG 0.445850 8_1:+88842985 Msa1224120:intron
CAAGCAACATTCAGCCAGTC+AGG 0.447609 8_1:-88847444 None:intergenic
TTCATGCCAAAAGGAAATAC+AGG 0.454483 8_1:+88847718 Msa1224120:three_prime_UTR
GTATTTCTTTGCAACATTTG+AGG 0.457251 8_1:-88844463 None:intergenic
AAAGCTCATAGGAACAATTT+GGG 0.457327 8_1:-88844439 None:intergenic
TTGGAACTTCATCTCAGCTC+GGG 0.458986 8_1:-88844504 None:intergenic
AATGTTTGCCTGCGTTCAAA+AGG 0.459522 8_1:+88843900 Msa1224120:CDS
TTCCGAAAACATTGGACAAA+TGG 0.462884 8_1:+88844857 Msa1224120:CDS
AGTTGTGTCCCAAAAGAAAT+GGG 0.463161 8_1:+88844647 Msa1224120:CDS
AACATGGGACAGGTCTGAGC+TGG 0.463529 8_1:+88844909 Msa1224120:CDS
GTCTTTGACAGCTTGATCAA+TGG 0.468451 8_1:-88847399 None:intergenic
CTGGATGCCCACATCAAGTC+AGG 0.469410 8_1:+88846982 Msa1224120:CDS
GGATCAGTATACGGTTGAAA+TGG 0.473452 8_1:-88845632 None:intergenic
GATCTTCAAATTTATCAGAA+GGG 0.473985 8_1:-88845571 None:intergenic
ACAAAGAGCAGGAGCAGAGC+TGG 0.474771 8_1:+88843439 Msa1224120:CDS
AAATACTATGGGATGTTTGA+AGG 0.476643 8_1:+88843162 Msa1224120:CDS
GTTCTTTAAAGGTTATATAG+AGG 0.476754 8_1:+88845496 Msa1224120:CDS
TGGGAGTGTAAACAGCGTTC+GGG 0.479231 8_1:+88847513 Msa1224120:three_prime_UTR
GTGTGGTGGTAATGAGAAAT+CGG 0.481094 8_1:+88843123 Msa1224120:CDS
TGATTTGACTGTTCTTGTCT+AGG 0.483352 8_1:-88843019 None:intergenic
GGGTTGTGGTAGTTCTCTGT+TGG 0.483953 8_1:+88844670 Msa1224120:CDS
GAGGCAGTATTTATTCCTGC+TGG 0.484620 8_1:+88846963 Msa1224120:CDS
TAAAATTTAACATTGACAAA+AGG 0.484754 8_1:-88847601 None:intergenic
CGGTGATCCTCCAGGTTGCT+GGG 0.486711 8_1:+88847494 Msa1224120:three_prime_UTR
GTGACAAGGAACGTGTCTAT+TGG 0.486752 8_1:+88844298 Msa1224120:CDS
ACCTGGAGGATCACCGACTA+AGG 0.491786 8_1:-88847487 None:intergenic
TCGGGCTGGAACTCTCAATC+TGG 0.493514 8_1:+88845655 Msa1224120:CDS
GGATTAAAGAAGAACTTGGC+AGG 0.496045 8_1:+88845741 Msa1224120:CDS
TTCTTTAAAGGTTATATAGA+GGG 0.499890 8_1:+88845497 Msa1224120:CDS
TTATTGTTCACCGGTTGAGC+AGG 0.500773 8_1:+88846672 Msa1224120:CDS
AAATCGGAACCAGAAGGAAA+AGG 0.500939 8_1:+88843139 Msa1224120:CDS
CTGAGGCGCATTCTCCCACA+TGG 0.504365 8_1:+88844695 Msa1224120:CDS
ACATCAAGTCAGGAATCTTA+AGG 0.504379 8_1:+88846992 Msa1224120:CDS
TAGAGACAATCTTCTGATTG+TGG 0.506045 8_1:-88841951 None:intergenic
CAGGCATACTTATTGTTCAC+CGG 0.508030 8_1:+88846663 Msa1224120:CDS
GAAGAACATATAGTAATCTC+TGG 0.510135 8_1:+88845519 Msa1224120:CDS
AAATTGAACAAACTACTCTT+CGG 0.511155 8_1:+88844768 Msa1224120:CDS
TTTACTGAATTGTTCCTGAC+TGG 0.511371 8_1:+88847430 Msa1224120:exon
ACATGGGTGGATGTCTGCCT+TGG 0.513331 8_1:+88844712 Msa1224120:CDS
GGAGCACAAGAAGAAGTTGA+AGG 0.513811 8_1:+88846818 Msa1224120:CDS
AGGTCTGAGCTGGGAGCCGA+TGG 0.514364 8_1:+88844919 Msa1224120:CDS
TAATAATACCTCCGCTGTAT+GGG 0.515560 8_1:-88846296 None:intergenic
ATTATGGTATTCATGCCAAA+AGG 0.517551 8_1:+88847709 Msa1224120:three_prime_UTR
AGATCTTCAAATTTATCAGA+AGG 0.521629 8_1:-88845572 None:intergenic
ACTTGATGTGGGCATCCAGC+AGG 0.524603 8_1:-88846978 None:intergenic
GTTCGTGATGTTCTAAAACA+TGG 0.525158 8_1:+88844893 Msa1224120:CDS
CTCTCCGAAATATATCCCAC+AGG 0.525312 8_1:-88846591 None:intergenic
TTCAACCGTATACTGATCCT+CGG 0.526738 8_1:+88845636 Msa1224120:CDS
AGTTTGAATGCTTCATTGAG+AGG 0.529173 8_1:+88847550 Msa1224120:three_prime_UTR
GAGTGTAATGCCAGGAGTGA+TGG 0.530231 8_1:+88844617 Msa1224120:CDS
TTCGTGATGTTCTAAAACAT+GGG 0.530753 8_1:+88844894 Msa1224120:CDS
ATCTTCAAATTTATCAGAAG+GGG 0.535676 8_1:-88845570 None:intergenic
CTACTTTCAGACATCTAACA+TGG 0.537773 8_1:+88844041 Msa1224120:intron
TGTGTTTCTTGGGAAGCTGA+CGG 0.538542 8_1:-88847177 None:intergenic
ATCTTTCACAATGTGTCTGA+GGG 0.539751 8_1:+88846514 Msa1224120:CDS
TTCTTCTTAAGACAAAGAGC+AGG 0.540103 8_1:+88843428 Msa1224120:CDS
GAAGAAGATGTATCGAGCTA+TGG 0.550506 8_1:+88844794 Msa1224120:CDS
TATGGGATTAAAGAAGAACT+TGG 0.552658 8_1:+88845737 Msa1224120:CDS
TTAAGATTCCTGACTTGATG+TGG 0.553851 8_1:-88846990 None:intergenic
AAATCACAAGACACTGGTAG+AGG 0.557418 8_1:-88844566 None:intergenic
ATATGTTCTCTGTTGTCGCA+AGG 0.559696 8_1:-88846427 None:intergenic
CTCCACTGATTTCGATAGGA+CGG 0.560809 8_1:-88846489 None:intergenic
GAATAAATTCTTCACAATGT+CGG 0.560919 8_1:-88845601 None:intergenic
CTAGCATCTAAGAAGAGAGA+TGG 0.561973 8_1:+88843316 Msa1224120:CDS
ATTGGAACTTCATCTCAGCT+CGG 0.562205 8_1:-88844505 None:intergenic
GAAGGAAAAGGAAATACTAT+GGG 0.562668 8_1:+88843151 Msa1224120:CDS
TGTTGCTCTTCCGAAAACAT+TGG 0.563196 8_1:+88844849 Msa1224120:CDS
GTATGCGATGCATCAATCAA+TGG 0.564613 8_1:+88843693 Msa1224120:CDS
AATTTGGGCAGATTCGATGA+AGG 0.564967 8_1:-88844424 None:intergenic
AGATGCTGAAGCTAAAAGAC+TGG 0.565379 8_1:+88845546 Msa1224120:CDS
TCAACCGTATACTGATCCTC+GGG 0.565860 8_1:+88845637 Msa1224120:CDS
ACTAACACTTCCATCACTCC+TGG 0.566645 8_1:-88844627 None:intergenic
CGATTGCATGGCTAATTGTG+AGG 0.570429 8_1:+88845012 Msa1224120:CDS
ACTGCGAGCTTTGTCTTCCA+AGG 0.570985 8_1:-88844729 None:intergenic
AGTGAAGGCCATCGATTGCA+TGG 0.575237 8_1:+88845000 Msa1224120:CDS
AAATTTGTTTCAGATATGGA+AGG 0.578176 8_1:-88844116 None:intergenic
CATGTTCTAAAACCTGATAT+GGG 0.578332 8_1:+88845695 Msa1224120:CDS
ACAATTAGCCATGCAATCGA+TGG 0.580189 8_1:-88845008 None:intergenic
TGTTTACACTCCCAGCAACC+TGG 0.582518 8_1:-88847504 None:intergenic
ATACCGATACAAATTCAAAA+GGG 0.582996 8_1:+88843254 Msa1224120:CDS
AGGGGCTATGATTATATGCA+TGG 0.585379 8_1:+88844536 Msa1224120:CDS
GTAGTTCTCTGTTGGAGCTG+AGG 0.590028 8_1:+88844678 Msa1224120:CDS
TTCTACAGAAAATGAAACAA+TGG 0.590271 8_1:+88846555 Msa1224120:CDS
TATCTTTCACAATGTGTCTG+AGG 0.590309 8_1:+88846513 Msa1224120:CDS
GATGTTCTAAAACATGGGAC+AGG 0.591339 8_1:+88844899 Msa1224120:CDS
GGCGCATTCTCCCACATGGG+TGG 0.591623 8_1:+88844699 Msa1224120:CDS
TATCTACCGAGTGTAATGCC+AGG 0.591693 8_1:+88844609 Msa1224120:CDS
ACATGGGACAGGTCTGAGCT+GGG 0.594876 8_1:+88844910 Msa1224120:CDS
ATATCTCCACTGATTTCGAT+AGG 0.597449 8_1:-88846493 None:intergenic
GAGAACACCGTGCTCCAGAG+AGG 0.597552 8_1:+88846380 Msa1224120:CDS
AGAGAACTTCAACATATCCT+CGG 0.600419 8_1:-88843047 None:intergenic
AATGCTCGCCACATGACCAT+CGG 0.603094 8_1:-88844935 None:intergenic
TAAGATTCCTGACTTGATGT+GGG 0.603534 8_1:-88846989 None:intergenic
ATTTAGAAGGATGCAAGAGG+TGG 0.604972 8_1:+88847776 Msa1224120:three_prime_UTR
AGAACACCGTGCTCCAGAGA+GGG 0.606805 8_1:+88846381 Msa1224120:CDS
TGTTGCAAAGAAATACGTGA+TGG 0.607475 8_1:+88844470 Msa1224120:CDS
CTTCTTCTATAGACATATCA+GGG 0.611493 8_1:-88843836 None:intergenic
TACTATGGGATGTTTGAAGG+AGG 0.613119 8_1:+88843165 Msa1224120:CDS
ATCACTCCTGGCATTACACT+CGG 0.613940 8_1:-88844615 None:intergenic
GATTAAAGAAGAACTTGGCA+GGG 0.616962 8_1:+88845742 Msa1224120:CDS
GGTAACAGGTAGTGCCCTGT+GGG 0.617284 8_1:+88846576 Msa1224120:CDS
TTGTGTCCCAAAAGAAATGG+GGG 0.617770 8_1:+88844649 Msa1224120:CDS
GTCTCTAAATCACAAGACAC+TGG 0.619904 8_1:-88844572 None:intergenic
GCTGAAGAATTTCACGAGTG+TGG 0.620552 8_1:+88843106 Msa1224120:CDS
TTGTCATGAACAAAGTGTAG+AGG 0.621423 8_1:+88844137 Msa1224120:CDS
GCGAGCATTGTGTGATAATG+TGG 0.622160 8_1:+88844949 Msa1224120:CDS
CATCAGCCCTCTCTGGAGCA+CGG 0.622167 8_1:-88846387 None:intergenic
AATGAGAAATCGGAACCAGA+AGG 0.622864 8_1:+88843133 Msa1224120:CDS
GTGGGATATATTTCGGAGAG+AGG 0.626190 8_1:+88846594 Msa1224120:CDS
AAGTTCCAATATGTGAATAG+GGG 0.632079 8_1:+88844518 Msa1224120:CDS
ATTAAAGAAGAACTTGGCAG+GGG 0.632276 8_1:+88845743 Msa1224120:CDS
ACAGTCAAATCAACATTCCG+AGG 0.632981 8_1:+88843030 Msa1224120:CDS
TGGTAGAATCGATAACATAA+CGG 0.633314 8_1:+88843459 Msa1224120:CDS
CTTTCACAATGTGTCTGAGG+GGG 0.633363 8_1:+88846516 Msa1224120:CDS
TGAGGCGCATTCTCCCACAT+GGG 0.633374 8_1:+88844696 Msa1224120:CDS
TCTTCAAATTTATCAGAAGG+GGG 0.635024 8_1:-88845569 None:intergenic
AACCGTCCTATCGAAATCAG+TGG 0.635864 8_1:+88846487 Msa1224120:CDS
GTTATTTAGAAGGATGCAAG+AGG 0.638290 8_1:+88847773 Msa1224120:three_prime_UTR
TGGTAACAGGTAGTGCCCTG+TGG 0.639563 8_1:+88846575 Msa1224120:CDS
AATCACAAGACACTGGTAGA+GGG 0.646755 8_1:-88844565 None:intergenic
AGGGTGTTCAACAAAATACC+CGG 0.650067 8_1:+88843600 Msa1224120:intron
GCACAAGAAGAAGTTGAAGG+AGG 0.651643 8_1:+88846821 Msa1224120:CDS
GAAGAATTTCACGAGTGTGG+TGG 0.651936 8_1:+88843109 Msa1224120:CDS
AGATTGAGAGTTCCAGCCCG+AGG 0.651977 8_1:-88845653 None:intergenic
GTTGTGTCCCAAAAGAAATG+GGG 0.654890 8_1:+88844648 Msa1224120:CDS
AGGCAGACATCCACCCATGT+GGG 0.655161 8_1:-88844709 None:intergenic
TCTAAATAACCACAAACACA+AGG 0.655248 8_1:-88847760 None:intergenic
AAGGCAGACATCCACCCATG+TGG 0.656813 8_1:-88844710 None:intergenic
AACCTTGCAGTCGTGCACAA+AGG 0.657614 8_1:+88847093 Msa1224120:intron
GCTGGGAGCCGATGGTCATG+TGG 0.662730 8_1:+88844927 Msa1224120:CDS
TGGAACTTCATCTCAGCTCG+GGG 0.672240 8_1:-88844503 None:intergenic
ACAAAGTCTCTGTAGTGACA+AGG 0.677477 8_1:+88844284 Msa1224120:CDS
TGATTCTACAGTAAGAATGG+AGG 0.678009 8_1:+88842988 Msa1224120:intron
ATAAATTCTTCACAATGTCG+GGG 0.685345 8_1:-88845599 None:intergenic
AGAACATATAGAAAATAAGG+AGG 0.686564 8_1:+88846441 Msa1224120:CDS
TCACTGTGATATGTCAGATG+CGG 0.691771 8_1:+88845784 Msa1224120:CDS
TCTTTCACAATGTGTCTGAG+GGG 0.694238 8_1:+88846515 Msa1224120:CDS
AGCTAGAGAAGATAAACTTG+AGG 0.698411 8_1:+88847201 Msa1224120:CDS
TCTCCGAAATATATCCCACA+GGG 0.704301 8_1:-88846590 None:intergenic
TTACACTCCCAGCAACCTGG+AGG 0.737160 8_1:-88847501 None:intergenic
TGTGTCCCAAAAGAAATGGG+GGG 0.738710 8_1:+88844650 Msa1224120:CDS
GGCTATGATTATATGCATGG+TGG 0.762734 8_1:+88844539 Msa1224120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACAAAAACAAAAAATAT+AGG - chr8_1:88844200-88844219 None:intergenic 10.0%
!!! TACTATATAGTTTAATATTT+TGG + chr8_1:88844363-88844382 Msa1224120:intron 10.0%
!!! ATTTTTTATACATATACTTA+GGG - chr8_1:88845206-88845225 None:intergenic 10.0%
!!! TATTTTTTATACATATACTT+AGG - chr8_1:88845207-88845226 None:intergenic 10.0%
!! AATAAAGAAAAACAAAAAAG+GGG - chr8_1:88842427-88842446 None:intergenic 15.0%
!! CAATAAAGAAAAACAAAAAA+GGG - chr8_1:88842428-88842447 None:intergenic 15.0%
!! ATTAAAATCAACTTTCATAA+AGG - chr8_1:88843531-88843550 None:intergenic 15.0%
!!! TTATGAAAGTTGATTTTAAT+TGG + chr8_1:88843531-88843550 Msa1224120:intron 15.0%
!!! TGTTGCTAATTTTTTAATAT+AGG + chr8_1:88843811-88843830 Msa1224120:intron 15.0%
!!! ATAGTTTAATATTTTGGTTT+TGG + chr8_1:88844369-88844388 Msa1224120:intron 15.0%
!!! TTTTTTATACATATACTTAG+GGG - chr8_1:88845205-88845224 None:intergenic 15.0%
!!! GTTCTTATTTGTAATTTTTA+AGG + chr8_1:88846721-88846740 Msa1224120:intron 15.0%
!! AACAATTATATGAAATAGTA+TGG - chr8_1:88846859-88846878 None:intergenic 15.0%
!! TAAAATTTAACATTGACAAA+AGG - chr8_1:88847604-88847623 None:intergenic 15.0%
!!! AAGAAAAGTATTATCAATTA+TGG + chr8_1:88847693-88847712 Msa1224120:three_prime_UTR 15.0%
!! GCAATAAAGAAAAACAAAAA+AGG - chr8_1:88842429-88842448 None:intergenic 20.0%
!!! TTTTGCATGTATATGTATTA+AGG + chr8_1:88842456-88842475 Msa1224120:intron 20.0%
!!! TGCAATTTTTAATGCAAAAT+GGG - chr8_1:88843875-88843894 None:intergenic 20.0%
!!! TTGCAATTTTTAATGCAAAA+TGG - chr8_1:88843876-88843895 None:intergenic 20.0%
!! AAAAGAATTTGAAGAGATAT+TGG - chr8_1:88844016-88844035 None:intergenic 20.0%
!!! TTTTTATACATATACTTAGG+GGG - chr8_1:88845204-88845223 None:intergenic 20.0%
!!! ATACTATTTAGTTTGTTGAT+TGG + chr8_1:88845268-88845287 Msa1224120:intron 20.0%
!!! TACTATTTAGTTTGTTGATT+GGG + chr8_1:88845269-88845288 Msa1224120:intron 20.0%
!! CATTTATACAAATAAAGATC+TGG - chr8_1:88845324-88845343 None:intergenic 20.0%
!! TTTAAGAAGAAATACTAAGA+TGG - chr8_1:88845376-88845395 None:intergenic 20.0%
!!! TTCTTTAAAGGTTATATAGA+GGG + chr8_1:88845497-88845516 Msa1224120:CDS 20.0%
!! CAAAAACATATATTGCTTAT+GGG + chr8_1:88845720-88845739 Msa1224120:CDS 20.0%
!! TTTATGGAGAAAATATTCAA+TGG - chr8_1:88845871-88845890 None:intergenic 20.0%
!! GTCTAAAAGGAATTATTATA+TGG + chr8_1:88846011-88846030 Msa1224120:intron 20.0%
!! AAAAGGAATTATTATATGGT+TGG + chr8_1:88846015-88846034 Msa1224120:intron 20.0%
!!! ATATTTTCATTTTCTACATG+TGG + chr8_1:88847317-88847336 Msa1224120:intron 20.0%
!!! AAAATTTTAGTATGCTTGTT+TGG + chr8_1:88847815-88847834 Msa1224120:three_prime_UTR 20.0%
! ATATGAATGATAAAGAGTGA+GGG - chr8_1:88842049-88842068 None:intergenic 25.0%
! AATATGAATGATAAAGAGTG+AGG - chr8_1:88842050-88842069 None:intergenic 25.0%
! TCATATTCATTCATATGATC+AGG + chr8_1:88842063-88842082 Msa1224120:five_prime_UTR 25.0%
!!! GTACATAAGCTATTTCTATT+GGG + chr8_1:88842558-88842577 Msa1224120:intron 25.0%
!! ATGATCTAGATTATGGTTTT+TGG + chr8_1:88842932-88842951 Msa1224120:intron 25.0%
!!! TTTTGGAAATTCAAAGAGAA+AGG + chr8_1:88843084-88843103 Msa1224120:CDS 25.0%
!! ACAGTTTCACAAGAAAATTT+TGG + chr8_1:88843190-88843209 Msa1224120:CDS 25.0%
! ATACCGATACAAATTCAAAA+GGG + chr8_1:88843254-88843273 Msa1224120:CDS 25.0%
!! ATTTTTGAACATTTAGTGCA+AGG - chr8_1:88843668-88843687 None:intergenic 25.0%
! TCATCACAGAATTTCATTAA+GGG - chr8_1:88843959-88843978 None:intergenic 25.0%
! TTCATCACAGAATTTCATTA+AGG - chr8_1:88843960-88843979 None:intergenic 25.0%
! AATTTGAAGAGATATTGGTA+TGG - chr8_1:88844011-88844030 None:intergenic 25.0%
!!! ATACTGAGCTTTTTCATAAT+TGG - chr8_1:88844073-88844092 None:intergenic 25.0%
!! AAATTTGTTTCAGATATGGA+AGG - chr8_1:88844119-88844138 None:intergenic 25.0%
!! TGACAAATTTGTTTCAGATA+TGG - chr8_1:88844123-88844142 None:intergenic 25.0%
! GATATAGAAGCAAAAATACA+AGG + chr8_1:88844162-88844181 Msa1224120:CDS 25.0%
! CAATAATAATCTCTTCTGTT+AGG + chr8_1:88844237-88844256 Msa1224120:intron 25.0%
! AAATTGAACAAACTACTCTT+CGG + chr8_1:88844768-88844787 Msa1224120:CDS 25.0%
! TCAAAAAGCAGTTTAAAAGA+AGG + chr8_1:88844824-88844843 Msa1224120:CDS 25.0%
! CAAAAAGCAGTTTAAAAGAA+GGG + chr8_1:88844825-88844844 Msa1224120:CDS 25.0%
! ACTTTCAAACTGTAATAAAG+GGG - chr8_1:88845044-88845063 None:intergenic 25.0%
! GACTTTCAAACTGTAATAAA+GGG - chr8_1:88845045-88845064 None:intergenic 25.0%
! AGACTTTCAAACTGTAATAA+AGG - chr8_1:88845046-88845065 None:intergenic 25.0%
! ACTACAAATTTAAACATGCA+TGG - chr8_1:88845081-88845100 None:intergenic 25.0%
!!! TGTGAATTTCTAGTTTTTCA+AGG + chr8_1:88845146-88845165 Msa1224120:intron 25.0%
!! TTTTATACATATACTTAGGG+GGG - chr8_1:88845203-88845222 None:intergenic 25.0%
! AGACATTGCATATAATACAA+TGG - chr8_1:88845300-88845319 None:intergenic 25.0%
! AATACTCGTATGTTCTTTAA+AGG + chr8_1:88845485-88845504 Msa1224120:CDS 25.0%
!! GTTCTTTAAAGGTTATATAG+AGG + chr8_1:88845496-88845515 Msa1224120:CDS 25.0%
! ATCTTCAAATTTATCAGAAG+GGG - chr8_1:88845573-88845592 None:intergenic 25.0%
! GATCTTCAAATTTATCAGAA+GGG - chr8_1:88845574-88845593 None:intergenic 25.0%
! AGATCTTCAAATTTATCAGA+AGG - chr8_1:88845575-88845594 None:intergenic 25.0%
! AATAAATTCTTCACAATGTC+GGG - chr8_1:88845603-88845622 None:intergenic 25.0%
! GAATAAATTCTTCACAATGT+CGG - chr8_1:88845604-88845623 None:intergenic 25.0%
!! CCATAAGCAATATATGTTTT+TGG - chr8_1:88845722-88845741 None:intergenic 25.0%
! CCAAAAACATATATTGCTTA+TGG + chr8_1:88845719-88845738 Msa1224120:CDS 25.0%
! AAAGCAATTAAATTACAGCT+CGG - chr8_1:88845826-88845845 None:intergenic 25.0%
!! AAGAAGAATGAATGGATTTA+TGG - chr8_1:88845887-88845906 None:intergenic 25.0%
! TTACTGTGTCAAATTTCAAA+TGG + chr8_1:88846212-88846231 Msa1224120:intron 25.0%
!! TCTAGTTTAATAATTGTCGT+AGG + chr8_1:88846261-88846280 Msa1224120:intron 25.0%
! CAGAGAACATATAGAAAATA+AGG + chr8_1:88846438-88846457 Msa1224120:CDS 25.0%
! AGAACATATAGAAAATAAGG+AGG + chr8_1:88846441-88846460 Msa1224120:CDS 25.0%
!! TGTTTCATTTTCTGTAGAAA+TGG - chr8_1:88846554-88846573 None:intergenic 25.0%
! TTCTACAGAAAATGAAACAA+TGG + chr8_1:88846555-88846574 Msa1224120:CDS 25.0%
!! AATCAAATTCTTTGTTGGTT+AGG + chr8_1:88846755-88846774 Msa1224120:intron 25.0%
! TAAAAACATTGGTCATGAAT+TGG - chr8_1:88846789-88846808 None:intergenic 25.0%
! CCAAAGTCAAATAAAAACAT+TGG - chr8_1:88846800-88846819 None:intergenic 25.0%
!!! CCAATGTTTTTATTTGACTT+TGG + chr8_1:88846797-88846816 Msa1224120:CDS 25.0%
! CATTAATAACTAATAACTGC+AGG - chr8_1:88846891-88846910 None:intergenic 25.0%
! GTCAGTTTCAAATAAGTTAT+TGG + chr8_1:88847284-88847303 Msa1224120:intron 25.0%
TATGAATGATAAAGAGTGAG+GGG - chr8_1:88842048-88842067 None:intergenic 30.0%
CCAAAAAAAACAGAGTTGAA+CGG - chr8_1:88842209-88842228 None:intergenic 30.0%
!!! CGTTCAACTCTGTTTTTTTT+GGG + chr8_1:88842207-88842226 Msa1224120:intron 30.0%
ATATGTATTAAGGTCCTGTA+TGG + chr8_1:88842466-88842485 Msa1224120:intron 30.0%
AATAAGTTGTCAATCCATAC+AGG - chr8_1:88842483-88842502 None:intergenic 30.0%
!! CGTACATAAGCTATTTCTAT+TGG + chr8_1:88842557-88842576 Msa1224120:intron 30.0%
TAAGTTCTGTGATACTGTTT+AGG - chr8_1:88842720-88842739 None:intergenic 30.0%
AAAGCCATACTATAGACTTA+GGG - chr8_1:88842781-88842800 None:intergenic 30.0%
GAGTGTTATGATCTAGATTA+TGG + chr8_1:88842925-88842944 Msa1224120:intron 30.0%
!! TGTTGATTCTACAGTAAGAA+TGG + chr8_1:88842985-88843004 Msa1224120:intron 30.0%
! ATAGTATTTCCTTTTCCTTC+TGG - chr8_1:88843151-88843170 None:intergenic 30.0%
AGAAGGAAAAGGAAATACTA+TGG + chr8_1:88843150-88843169 Msa1224120:CDS 30.0%
GAAGGAAAAGGAAATACTAT+GGG + chr8_1:88843151-88843170 Msa1224120:CDS 30.0%
AAATACTATGGGATGTTTGA+AGG + chr8_1:88843162-88843181 Msa1224120:CDS 30.0%
CATACCGATACAAATTCAAA+AGG + chr8_1:88843253-88843272 Msa1224120:CDS 30.0%
! ATGCCCTTTTGAATTTGTAT+CGG - chr8_1:88843260-88843279 None:intergenic 30.0%
! AAGTTTCTGTTTCTTCTTTG+AGG - chr8_1:88843359-88843378 None:intergenic 30.0%
TGGTAGAATCGATAACATAA+CGG + chr8_1:88843459-88843478 Msa1224120:CDS 30.0%
TAGTTAGTCAATTCTGCTAA+GGG + chr8_1:88843732-88843751 Msa1224120:intron 30.0%
!!! GTATCTGTTTTTTGTTTTCG+TGG + chr8_1:88843760-88843779 Msa1224120:intron 30.0%
CTTCTTCTATAGACATATCA+GGG - chr8_1:88843839-88843858 None:intergenic 30.0%
ACTTCTTCTATAGACATATC+AGG - chr8_1:88843840-88843859 None:intergenic 30.0%
CATCACAGAATTTCATTAAG+GGG - chr8_1:88843958-88843977 None:intergenic 30.0%
! TGTCCTTTTACTTGAGATAA+TGG + chr8_1:88844325-88844344 Msa1224120:intron 30.0%
ATGCCATTATCTCAAGTAAA+AGG - chr8_1:88844331-88844350 None:intergenic 30.0%
AAAGCTCATAGGAACAATTT+GGG - chr8_1:88844442-88844461 None:intergenic 30.0%
GTATTTCTTTGCAACATTTG+AGG - chr8_1:88844466-88844485 None:intergenic 30.0%
TGAAGTTCCAATATGTGAAT+AGG + chr8_1:88844516-88844535 Msa1224120:CDS 30.0%
GAAGTTCCAATATGTGAATA+GGG + chr8_1:88844517-88844536 Msa1224120:CDS 30.0%
AAGTTCCAATATGTGAATAG+GGG + chr8_1:88844518-88844537 Msa1224120:CDS 30.0%
AGAACATCACGAACAATAAT+TGG - chr8_1:88844887-88844906 None:intergenic 30.0%
!! TTCGTGATGTTCTAAAACAT+GGG + chr8_1:88844894-88844913 Msa1224120:CDS 30.0%
TTCAAAAATGTCAGAAGTGA+AGG + chr8_1:88844985-88845004 Msa1224120:CDS 30.0%
CTTTCAAACTGTAATAAAGG+GGG - chr8_1:88845043-88845062 None:intergenic 30.0%
CACTAATAGCATAGGTATTT+AGG - chr8_1:88845112-88845131 None:intergenic 30.0%
CAAGAAAACACTAATAGCAT+AGG - chr8_1:88845120-88845139 None:intergenic 30.0%
ACAGTATCAAAACACTCTTA+TGG - chr8_1:88845174-88845193 None:intergenic 30.0%
TTTATACATATACTTAGGGG+GGG - chr8_1:88845202-88845221 None:intergenic 30.0%
AAATGAGATTCTACATGTTG+TGG + chr8_1:88845339-88845358 Msa1224120:intron 30.0%
AAGAAATACTAAGATGGCAA+TGG - chr8_1:88845370-88845389 None:intergenic 30.0%
GAAGAACATATAGTAATCTC+TGG + chr8_1:88845519-88845538 Msa1224120:CDS 30.0%
TCTTCAAATTTATCAGAAGG+GGG - chr8_1:88845572-88845591 None:intergenic 30.0%
ATAAATTCTTCACAATGTCG+GGG - chr8_1:88845602-88845621 None:intergenic 30.0%
!!! CATATCAGGTTTTAGAACAT+GGG - chr8_1:88845696-88845715 None:intergenic 30.0%
!! CATGTTCTAAAACCTGATAT+GGG + chr8_1:88845695-88845714 Msa1224120:CDS 30.0%
TATGGGATTAAAGAAGAACT+TGG + chr8_1:88845737-88845756 Msa1224120:CDS 30.0%
ATGGAGAAAATATTCAATGG+AGG - chr8_1:88845868-88845887 None:intergenic 30.0%
AACTTTAGATGTATTCAGGT+AGG - chr8_1:88845922-88845941 None:intergenic 30.0%
! ATACATCTAAAGTTGCACAT+TGG + chr8_1:88845928-88845947 Msa1224120:intron 30.0%
TTCCACTTTACTTGTCTAAA+AGG + chr8_1:88845998-88846017 Msa1224120:intron 30.0%
! TTCCTTTTAGACAAGTAAAG+TGG - chr8_1:88846003-88846022 None:intergenic 30.0%
! TCATTTTCTGTAGAAATGGT+AGG - chr8_1:88846550-88846569 None:intergenic 30.0%
GAAAATGAAACAATGGTAAC+AGG + chr8_1:88846562-88846581 Msa1224120:CDS 30.0%
GCTCAAATCAAATTCTTTGT+TGG + chr8_1:88846750-88846769 Msa1224120:intron 30.0%
AGGTTTGACATATGATGATT+AGG - chr8_1:88847078-88847097 None:intergenic 30.0%
TGAAACTGACATCATAATGA+GGG - chr8_1:88847274-88847293 None:intergenic 30.0%
TTGAAACTGACATCATAATG+AGG - chr8_1:88847275-88847294 None:intergenic 30.0%
AACAATTCAGTAAAGCTTCT+AGG - chr8_1:88847424-88847443 None:intergenic 30.0%
!! CTACTTCATTTTTCCTTAGT+CGG + chr8_1:88847474-88847493 Msa1224120:three_prime_UTR 30.0%
ATTATGGTATTCATGCCAAA+AGG + chr8_1:88847709-88847728 Msa1224120:three_prime_UTR 30.0%
TCTAAATAACCACAAACACA+AGG - chr8_1:88847763-88847782 None:intergenic 30.0%
TGTGTTTGTGGTTATTTAGA+AGG + chr8_1:88847763-88847782 Msa1224120:three_prime_UTR 30.0%
TAGAGACAATCTTCTGATTG+TGG - chr8_1:88841954-88841973 None:intergenic 35.0%
AGAGTTGAACGGAAAAAACA+CGG - chr8_1:88842198-88842217 None:intergenic 35.0%
!!! CCGTTCAACTCTGTTTTTTT+TGG + chr8_1:88842206-88842225 Msa1224120:intron 35.0%
TGAGTATGTGATAAGAGACT+AGG + chr8_1:88842297-88842316 Msa1224120:intron 35.0%
GCTTATTTGAGTGTATCTAC+TGG - chr8_1:88842745-88842764 None:intergenic 35.0%
TCAAATAAGCCAATCCAAAC+AGG + chr8_1:88842755-88842774 Msa1224120:intron 35.0%
CAAAGCCATACTATAGACTT+AGG - chr8_1:88842782-88842801 None:intergenic 35.0%
TGATTCTACAGTAAGAATGG+AGG + chr8_1:88842988-88843007 Msa1224120:intron 35.0%
TGATTTGACTGTTCTTGTCT+AGG - chr8_1:88843022-88843041 None:intergenic 35.0%
AGAGAACTTCAACATATCCT+CGG - chr8_1:88843050-88843069 None:intergenic 35.0%
! AAAAGGGCATAAAGATGTTC+TGG + chr8_1:88843270-88843289 Msa1224120:CDS 35.0%
CTCTTCTTAGATGCTAGATT+GGG - chr8_1:88843313-88843332 None:intergenic 35.0%
TCTCTTCTTAGATGCTAGAT+TGG - chr8_1:88843314-88843333 None:intergenic 35.0%
TTCTTCTTAAGACAAAGAGC+AGG + chr8_1:88843428-88843447 Msa1224120:CDS 35.0%
CTTTACTAATTGTCTCAGCA+GGG + chr8_1:88843581-88843600 Msa1224120:intron 35.0%
ATGTCATCAGTGCATGAAAA+AGG + chr8_1:88843625-88843644 Msa1224120:CDS 35.0%
CTAGTTAGTCAATTCTGCTA+AGG + chr8_1:88843731-88843750 Msa1224120:intron 35.0%
! TAATTGTTCCTTTTGAACGC+AGG - chr8_1:88843911-88843930 None:intergenic 35.0%
GCGTTCAAAAGGAACAATTA+AGG + chr8_1:88843911-88843930 Msa1224120:CDS 35.0%
CTACTTTCAGACATCTAACA+TGG + chr8_1:88844041-88844060 Msa1224120:intron 35.0%
TTGTCATGAACAAAGTGTAG+AGG + chr8_1:88844137-88844156 Msa1224120:CDS 35.0%
CAAAGCTCATAGGAACAATT+TGG - chr8_1:88844443-88844462 None:intergenic 35.0%
TGTTGCAAAGAAATACGTGA+TGG + chr8_1:88844470-88844489 Msa1224120:CDS 35.0%
TAGTTGTGTCCCAAAAGAAA+TGG + chr8_1:88844646-88844665 Msa1224120:CDS 35.0%
AGTTGTGTCCCAAAAGAAAT+GGG + chr8_1:88844647-88844666 Msa1224120:CDS 35.0%
TCGCAGTATGCTGAAAATTT+GGG + chr8_1:88844745-88844764 Msa1224120:CDS 35.0%
TTCCGAAAACATTGGACAAA+TGG + chr8_1:88844857-88844876 Msa1224120:CDS 35.0%
! CACCATTTGTCCAATGTTTT+CGG - chr8_1:88844862-88844881 None:intergenic 35.0%
!! GTTCGTGATGTTCTAAAACA+TGG + chr8_1:88844893-88844912 Msa1224120:CDS 35.0%
TTATACATATACTTAGGGGG+GGG - chr8_1:88845201-88845220 None:intergenic 35.0%
AAAGGTTTAGAAGGGTGAAT+TGG - chr8_1:88845452-88845471 None:intergenic 35.0%
GTATTAATTGCAACCTGCAA+AGG - chr8_1:88845470-88845489 None:intergenic 35.0%
!!! CCATATCAGGTTTTAGAACA+TGG - chr8_1:88845697-88845716 None:intergenic 35.0%
!! CCATGTTCTAAAACCTGATA+TGG + chr8_1:88845694-88845713 Msa1224120:CDS 35.0%
!!! TATGTTTTTGGACCCATATC+AGG - chr8_1:88845710-88845729 None:intergenic 35.0%
GATTAAAGAAGAACTTGGCA+GGG + chr8_1:88845742-88845761 Msa1224120:CDS 35.0%
ATTAAAGAAGAACTTGGCAG+GGG + chr8_1:88845743-88845762 Msa1224120:CDS 35.0%
AAATATTCAATGGAGGAGGA+TGG - chr8_1:88845861-88845880 None:intergenic 35.0%
GAGAAAATATTCAATGGAGG+AGG - chr8_1:88845865-88845884 None:intergenic 35.0%
CAGAGAGAAAGAAGAATGAA+TGG - chr8_1:88845895-88845914 None:intergenic 35.0%
GTGCAACTTTAGATGTATTC+AGG - chr8_1:88845926-88845945 None:intergenic 35.0%
! TGTGTCACTGTATTGTAATG+TGG + chr8_1:88846055-88846074 Msa1224120:intron 35.0%
! AGAAGTGCATACTATTCTCT+GGG - chr8_1:88846098-88846117 None:intergenic 35.0%
!!! GAATATTTTGACCCATACAG+CGG + chr8_1:88846285-88846304 Msa1224120:CDS 35.0%
TAATAATACCTCCGCTGTAT+GGG - chr8_1:88846299-88846318 None:intergenic 35.0%
TTAATAATACCTCCGCTGTA+TGG - chr8_1:88846300-88846319 None:intergenic 35.0%
!! CGGAGGTATTATTAACTGAT+AGG + chr8_1:88846305-88846324 Msa1224120:CDS 35.0%
TCTGTGTGCTTCTTTCAAAT+TGG - chr8_1:88846347-88846366 None:intergenic 35.0%
GGTATTAGAGTGCAACAATA+TGG + chr8_1:88846462-88846481 Msa1224120:CDS 35.0%
!! ATATCTCCACTGATTTCGAT+AGG - chr8_1:88846496-88846515 None:intergenic 35.0%
TATCTTTCACAATGTGTCTG+AGG + chr8_1:88846513-88846532 Msa1224120:CDS 35.0%
ATCTTTCACAATGTGTCTGA+GGG + chr8_1:88846514-88846533 Msa1224120:CDS 35.0%
GAAAACACTCGAAAGAATTC+AGG + chr8_1:88846644-88846663 Msa1224120:CDS 35.0%
CATTATAATACCTGCTCAAC+CGG - chr8_1:88846685-88846704 None:intergenic 35.0%
! AGTTTTTGCTCAAAAGTCCA+CGG - chr8_1:88846939-88846958 None:intergenic 35.0%
! TGGACTTTTGAGCAAAAACT+TGG + chr8_1:88846939-88846958 Msa1224120:CDS 35.0%
! GGACTTTTGAGCAAAAACTT+GGG + chr8_1:88846940-88846959 Msa1224120:CDS 35.0%
! GACTTTTGAGCAAAAACTTG+GGG + chr8_1:88846941-88846960 Msa1224120:CDS 35.0%
! TAAGATTCCTGACTTGATGT+GGG - chr8_1:88846992-88847011 None:intergenic 35.0%
! TTAAGATTCCTGACTTGATG+TGG - chr8_1:88846993-88847012 None:intergenic 35.0%
ACATCAAGTCAGGAATCTTA+AGG + chr8_1:88846992-88847011 Msa1224120:CDS 35.0%
! ACACTCATGTACATTTTCTG+GGG - chr8_1:88847137-88847156 None:intergenic 35.0%
! GACACTCATGTACATTTTCT+GGG - chr8_1:88847138-88847157 None:intergenic 35.0%
! AGACACTCATGTACATTTTC+TGG - chr8_1:88847139-88847158 None:intergenic 35.0%
!! TCTCTAGCTTTGTGTTTCTT+GGG - chr8_1:88847190-88847209 None:intergenic 35.0%
!! TTCTCTAGCTTTGTGTTTCT+TGG - chr8_1:88847191-88847210 None:intergenic 35.0%
AGCTAGAGAAGATAAACTTG+AGG + chr8_1:88847201-88847220 Msa1224120:CDS 35.0%
GAAACTGACATCATAATGAG+GGG - chr8_1:88847273-88847292 None:intergenic 35.0%
TTTACTGAATTGTTCCTGAC+TGG + chr8_1:88847430-88847449 Msa1224120:exon 35.0%
AGTTTGAATGCTTCATTGAG+AGG + chr8_1:88847550-88847569 Msa1224120:three_prime_UTR 35.0%
!! GCTTCATTGAGAGGTTTTAA+TGG + chr8_1:88847559-88847578 Msa1224120:three_prime_UTR 35.0%
TTCATGCCAAAAGGAAATAC+AGG + chr8_1:88847718-88847737 Msa1224120:three_prime_UTR 35.0%
! TGATTGCCTGTATTTCCTTT+TGG - chr8_1:88847727-88847746 None:intergenic 35.0%
GTTATTTAGAAGGATGCAAG+AGG + chr8_1:88847773-88847792 Msa1224120:three_prime_UTR 35.0%
AACGAAATCGAGATCAACAG+AGG - chr8_1:88842175-88842194 None:intergenic 40.0%
ACAGTCAAATCAACATTCCG+AGG + chr8_1:88843030-88843049 Msa1224120:CDS 40.0%
GAGGATATGTTGAAGTTCTC+TGG + chr8_1:88843049-88843068 Msa1224120:CDS 40.0%
! GTGTGGTGGTAATGAGAAAT+CGG + chr8_1:88843123-88843142 Msa1224120:CDS 40.0%
AATGAGAAATCGGAACCAGA+AGG + chr8_1:88843133-88843152 Msa1224120:CDS 40.0%
AAATCGGAACCAGAAGGAAA+AGG + chr8_1:88843139-88843158 Msa1224120:CDS 40.0%
TACTATGGGATGTTTGAAGG+AGG + chr8_1:88843165-88843184 Msa1224120:CDS 40.0%
CTAGCATCTAAGAAGAGAGA+TGG + chr8_1:88843316-88843335 Msa1224120:CDS 40.0%
!!! GCTTTTGAAGTGCAGGAATT+AGG - chr8_1:88843503-88843522 None:intergenic 40.0%
!!! GGTTTTAGCTTTTGAAGTGC+AGG - chr8_1:88843510-88843529 None:intergenic 40.0%
GCTTTACTAATTGTCTCAGC+AGG + chr8_1:88843580-88843599 Msa1224120:intron 40.0%
! AGGGTGTTCAACAAAATACC+CGG + chr8_1:88843600-88843619 Msa1224120:intron 40.0%
! TCATGCACTGATGACATTTC+CGG - chr8_1:88843622-88843641 None:intergenic 40.0%
GTATGCGATGCATCAATCAA+TGG + chr8_1:88843693-88843712 Msa1224120:CDS 40.0%
CGATGCATCAATCAATGGTA+TGG + chr8_1:88843698-88843717 Msa1224120:intron 40.0%
AATGTTTGCCTGCGTTCAAA+AGG + chr8_1:88843900-88843919 Msa1224120:CDS 40.0%
TTGTCACTACAGAGACTTTG+TGG - chr8_1:88844285-88844304 None:intergenic 40.0%
ACAAAGTCTCTGTAGTGACA+AGG + chr8_1:88844284-88844303 Msa1224120:CDS 40.0%
AATTTGGGCAGATTCGATGA+AGG - chr8_1:88844427-88844446 None:intergenic 40.0%
! ACATTTGAGGCAAAGCTCAT+AGG - chr8_1:88844453-88844472 None:intergenic 40.0%
ATTGGAACTTCATCTCAGCT+CGG - chr8_1:88844508-88844527 None:intergenic 40.0%
CATAGCCCCTATTCACATAT+TGG - chr8_1:88844526-88844545 None:intergenic 40.0%
AGGGGCTATGATTATATGCA+TGG + chr8_1:88844536-88844555 Msa1224120:CDS 40.0%
GGCTATGATTATATGCATGG+TGG + chr8_1:88844539-88844558 Msa1224120:CDS 40.0%
AATCACAAGACACTGGTAGA+GGG - chr8_1:88844568-88844587 None:intergenic 40.0%
AAATCACAAGACACTGGTAG+AGG - chr8_1:88844569-88844588 None:intergenic 40.0%
GTCTCTAAATCACAAGACAC+TGG - chr8_1:88844575-88844594 None:intergenic 40.0%
GTTGTGTCCCAAAAGAAATG+GGG + chr8_1:88844648-88844667 Msa1224120:CDS 40.0%
TTGTGTCCCAAAAGAAATGG+GGG + chr8_1:88844649-88844668 Msa1224120:CDS 40.0%
CTCGCAGTATGCTGAAAATT+TGG + chr8_1:88844744-88844763 Msa1224120:CDS 40.0%
GAAGAAGATGTATCGAGCTA+TGG + chr8_1:88844794-88844813 Msa1224120:CDS 40.0%
TGTTGCTCTTCCGAAAACAT+TGG + chr8_1:88844849-88844868 Msa1224120:CDS 40.0%
!! GATGTTCTAAAACATGGGAC+AGG + chr8_1:88844899-88844918 Msa1224120:CDS 40.0%
ACAATTAGCCATGCAATCGA+TGG - chr8_1:88845011-88845030 None:intergenic 40.0%
TTGTGTGTCAGTGTGTGTAT+AGG + chr8_1:88845241-88845260 Msa1224120:intron 40.0%
TGTGTGTCAGTGTGTGTATA+GGG + chr8_1:88845242-88845261 Msa1224120:intron 40.0%
! TTGTATTTTGTGCAGCATGC+CGG + chr8_1:88845418-88845437 Msa1224120:intron 40.0%
GGGTGAATTGGTTAGAATTC+CGG - chr8_1:88845440-88845459 None:intergenic 40.0%
CAACCTGCAAAGGTTTAGAA+GGG - chr8_1:88845460-88845479 None:intergenic 40.0%
!!! TCTTTTAGCTTCAGCATCTC+TGG - chr8_1:88845545-88845564 None:intergenic 40.0%
AGATGCTGAAGCTAAAAGAC+TGG + chr8_1:88845546-88845565 Msa1224120:CDS 40.0%
GGATCAGTATACGGTTGAAA+TGG - chr8_1:88845635-88845654 None:intergenic 40.0%
TTCAACCGTATACTGATCCT+CGG + chr8_1:88845636-88845655 Msa1224120:CDS 40.0%
GGATTAAAGAAGAACTTGGC+AGG + chr8_1:88845741-88845760 Msa1224120:CDS 40.0%
TCACTGTGATATGTCAGATG+CGG + chr8_1:88845784-88845803 Msa1224120:CDS 40.0%
! GAGAAGTGCATACTATTCTC+TGG - chr8_1:88846099-88846118 None:intergenic 40.0%
ACAACAAATGCACATCGCAT+GGG - chr8_1:88846178-88846197 None:intergenic 40.0%
AACAACAAATGCACATCGCA+TGG - chr8_1:88846179-88846198 None:intergenic 40.0%
ATATGTTCTCTGTTGTCGCA+AGG - chr8_1:88846430-88846449 None:intergenic 40.0%
TCTTTCACAATGTGTCTGAG+GGG + chr8_1:88846515-88846534 Msa1224120:CDS 40.0%
TCTCCGAAATATATCCCACA+GGG - chr8_1:88846593-88846612 None:intergenic 40.0%
AGAGAGGACACTGAAAAGTT+AGG + chr8_1:88846610-88846629 Msa1224120:CDS 40.0%
CAGGCATACTTATTGTTCAC+CGG + chr8_1:88846663-88846682 Msa1224120:CDS 40.0%
AAGAAGTTGAAGGAGGAGTT+TGG + chr8_1:88846828-88846847 Msa1224120:CDS 40.0%
! TTTTGAGCAAAAACTTGGGG+AGG + chr8_1:88846944-88846963 Msa1224120:CDS 40.0%
GTCTTTGACAGCTTGATCAA+TGG - chr8_1:88847402-88847421 None:intergenic 40.0%
ATACAGTGTCCTTGTGTTTG+TGG + chr8_1:88847751-88847770 Msa1224120:three_prime_UTR 40.0%
ATTTAGAAGGATGCAAGAGG+TGG + chr8_1:88847776-88847795 Msa1224120:three_prime_UTR 40.0%
ATAAAGAGTGAGGGGAGGAT+CGG - chr8_1:88842040-88842059 None:intergenic 45.0%
GAATGATAAAGAGTGAGGGG+AGG - chr8_1:88842045-88842064 None:intergenic 45.0%
CTATAGACTTAGGGCCTGTT+TGG - chr8_1:88842772-88842791 None:intergenic 45.0%
CAGGCCCTAAGTCTATAGTA+TGG + chr8_1:88842774-88842793 Msa1224120:intron 45.0%
! TCTGGATGCGCAAAAGCTTT+TGG + chr8_1:88843067-88843086 Msa1224120:CDS 45.0%
GCTGAAGAATTTCACGAGTG+TGG + chr8_1:88843106-88843125 Msa1224120:CDS 45.0%
GAAGAATTTCACGAGTGTGG+TGG + chr8_1:88843109-88843128 Msa1224120:CDS 45.0%
! TTTGAGGCAGCATGCTTCTT+TGG - chr8_1:88843343-88843362 None:intergenic 45.0%
! CATGCACTGATGACATTTCC+GGG - chr8_1:88843621-88843640 None:intergenic 45.0%
GTGACAAGGAACGTGTCTAT+TGG + chr8_1:88844298-88844317 Msa1224120:CDS 45.0%
TTGGAACTTCATCTCAGCTC+GGG - chr8_1:88844507-88844526 None:intergenic 45.0%
TATCTACCGAGTGTAATGCC+AGG + chr8_1:88844609-88844628 Msa1224120:CDS 45.0%
ATCACTCCTGGCATTACACT+CGG - chr8_1:88844618-88844637 None:intergenic 45.0%
ACTAACACTTCCATCACTCC+TGG - chr8_1:88844630-88844649 None:intergenic 45.0%
TGTGTCCCAAAAGAAATGGG+GGG + chr8_1:88844650-88844669 Msa1224120:CDS 45.0%
! CACAACCCCCCATTTCTTTT+GGG - chr8_1:88844658-88844677 None:intergenic 45.0%
! GCGAGCATTGTGTGATAATG+TGG + chr8_1:88844949-88844968 Msa1224120:CDS 45.0%
CGATTGCATGGCTAATTGTG+AGG + chr8_1:88845012-88845031 Msa1224120:CDS 45.0%
GCATGGCTAATTGTGAGGTT+TGG + chr8_1:88845017-88845036 Msa1224120:intron 45.0%
TCACCCTTCTAAACCTTTGC+AGG + chr8_1:88845454-88845473 Msa1224120:intron 45.0%
GCAACCTGCAAAGGTTTAGA+AGG - chr8_1:88845461-88845480 None:intergenic 45.0%
TCAACCGTATACTGATCCTC+GGG + chr8_1:88845637-88845656 Msa1224120:CDS 45.0%
!!! TCAGGTTTTAGAACATGGGC+TGG - chr8_1:88845692-88845711 None:intergenic 45.0%
ATGCACTTCTCTTGCTACAG+AGG + chr8_1:88846108-88846127 Msa1224120:intron 45.0%
TGCACTTCTCTTGCTACAGA+GGG + chr8_1:88846109-88846128 Msa1224120:intron 45.0%
!!! TATTTTGACCCATACAGCGG+AGG + chr8_1:88846288-88846307 Msa1224120:CDS 45.0%
AGGGCTGATGTATGCCTAAA+TGG + chr8_1:88846400-88846419 Msa1224120:CDS 45.0%
AACCGTCCTATCGAAATCAG+TGG + chr8_1:88846487-88846506 Msa1224120:CDS 45.0%
!! CTCCACTGATTTCGATAGGA+CGG - chr8_1:88846492-88846511 None:intergenic 45.0%
CTTTCACAATGTGTCTGAGG+GGG + chr8_1:88846516-88846535 Msa1224120:CDS 45.0%
GTGCCCTGTGGGATATATTT+CGG + chr8_1:88846587-88846606 Msa1224120:CDS 45.0%
CTCTCCGAAATATATCCCAC+AGG - chr8_1:88846594-88846613 None:intergenic 45.0%
GTGGGATATATTTCGGAGAG+AGG + chr8_1:88846594-88846613 Msa1224120:CDS 45.0%
! TTATTGTTCACCGGTTGAGC+AGG + chr8_1:88846672-88846691 Msa1224120:CDS 45.0%
GGAGCACAAGAAGAAGTTGA+AGG + chr8_1:88846818-88846837 Msa1224120:CDS 45.0%
GCACAAGAAGAAGTTGAAGG+AGG + chr8_1:88846821-88846840 Msa1224120:CDS 45.0%
GAGGCAGTATTTATTCCTGC+TGG + chr8_1:88846963-88846982 Msa1224120:CDS 45.0%
TGTGTTTCTTGGGAAGCTGA+CGG - chr8_1:88847180-88847199 None:intergenic 45.0%
TGACATCATAATGAGGGGAG+TGG - chr8_1:88847268-88847287 None:intergenic 45.0%
TAAAGAGTGAGGGGAGGATC+GGG - chr8_1:88842039-88842058 None:intergenic 50.0%
GACTTAGGGCCTGTTTGGAT+TGG - chr8_1:88842767-88842786 None:intergenic 50.0%
TGGAACTTCATCTCAGCTCG+GGG - chr8_1:88844506-88844525 None:intergenic 50.0%
GAGTGTAATGCCAGGAGTGA+TGG + chr8_1:88844617-88844636 Msa1224120:CDS 50.0%
! CCACAACCCCCCATTTCTTT+TGG - chr8_1:88844659-88844678 None:intergenic 50.0%
CCAAAAGAAATGGGGGGTTG+TGG + chr8_1:88844656-88844675 Msa1224120:CDS 50.0%
GGGTTGTGGTAGTTCTCTGT+TGG + chr8_1:88844670-88844689 Msa1224120:CDS 50.0%
GTAGTTCTCTGTTGGAGCTG+AGG + chr8_1:88844678-88844697 Msa1224120:CDS 50.0%
! ACTGCGAGCTTTGTCTTCCA+AGG - chr8_1:88844732-88844751 None:intergenic 50.0%
AATGCTCGCCACATGACCAT+CGG - chr8_1:88844938-88844957 None:intergenic 50.0%
! AGTGAAGGCCATCGATTGCA+TGG + chr8_1:88845000-88845019 Msa1224120:CDS 50.0%
GCACTTCTCTTGCTACAGAG+GGG + chr8_1:88846110-88846129 Msa1224120:intron 50.0%
CTTGCTACAGAGGGGAGATA+TGG + chr8_1:88846118-88846137 Msa1224120:intron 50.0%
TGTCGCAAGGTCGACCATTT+AGG - chr8_1:88846417-88846436 None:intergenic 50.0%
!! GGCTTTTAGGTGTAGAACCG+TGG + chr8_1:88846919-88846938 Msa1224120:intron 50.0%
AACCTTGCAGTCGTGCACAA+AGG + chr8_1:88847093-88847112 Msa1224120:intron 50.0%
AACCTTTGTGCACGACTGCA+AGG - chr8_1:88847098-88847117 None:intergenic 50.0%
CAAGCAACATTCAGCCAGTC+AGG - chr8_1:88847447-88847466 None:intergenic 50.0%
TGTTTACACTCCCAGCAACC+TGG - chr8_1:88847507-88847526 None:intergenic 50.0%
! CTGGGAGTGTAAACAGCGTT+CGG + chr8_1:88847512-88847531 Msa1224120:three_prime_UTR 50.0%
! TGGGAGTGTAAACAGCGTTC+GGG + chr8_1:88847513-88847532 Msa1224120:three_prime_UTR 50.0%
ACAAAGAGCAGGAGCAGAGC+TGG + chr8_1:88843439-88843458 Msa1224120:CDS 55.0%
TGAGGCGCATTCTCCCACAT+GGG + chr8_1:88844696-88844715 Msa1224120:CDS 55.0%
AGGCAGACATCCACCCATGT+GGG - chr8_1:88844712-88844731 None:intergenic 55.0%
AAGGCAGACATCCACCCATG+TGG - chr8_1:88844713-88844732 None:intergenic 55.0%
ACATGGGTGGATGTCTGCCT+TGG + chr8_1:88844712-88844731 Msa1224120:CDS 55.0%
AACATGGGACAGGTCTGAGC+TGG + chr8_1:88844909-88844928 Msa1224120:CDS 55.0%
ACATGGGACAGGTCTGAGCT+GGG + chr8_1:88844910-88844929 Msa1224120:CDS 55.0%
CCAGCCCGAGGATCAGTATA+CGG - chr8_1:88845644-88845663 None:intergenic 55.0%
AGATTGAGAGTTCCAGCCCG+AGG - chr8_1:88845656-88845675 None:intergenic 55.0%
! TCGGGCTGGAACTCTCAATC+TGG + chr8_1:88845655-88845674 Msa1224120:CDS 55.0%
AGAACACCGTGCTCCAGAGA+GGG + chr8_1:88846381-88846400 Msa1224120:CDS 55.0%
AGGCATACATCAGCCCTCTC+TGG - chr8_1:88846397-88846416 None:intergenic 55.0%
TGGTAACAGGTAGTGCCCTG+TGG + chr8_1:88846575-88846594 Msa1224120:CDS 55.0%
GGTAACAGGTAGTGCCCTGT+GGG + chr8_1:88846576-88846595 Msa1224120:CDS 55.0%
ACTTGATGTGGGCATCCAGC+AGG - chr8_1:88846981-88847000 None:intergenic 55.0%
CTGGATGCCCACATCAAGTC+AGG + chr8_1:88846982-88847001 Msa1224120:CDS 55.0%
TCCTTAGTCGGTGATCCTCC+AGG + chr8_1:88847486-88847505 Msa1224120:three_prime_UTR 55.0%
! ACCTGGAGGATCACCGACTA+AGG - chr8_1:88847490-88847509 None:intergenic 55.0%
TTACACTCCCAGCAACCTGG+AGG - chr8_1:88847504-88847523 None:intergenic 55.0%
CTGAGGCGCATTCTCCCACA+TGG + chr8_1:88844695-88844714 Msa1224120:CDS 60.0%
CCGTATACTGATCCTCGGGC+TGG + chr8_1:88845641-88845660 Msa1224120:CDS 60.0%
GAGAACACCGTGCTCCAGAG+AGG + chr8_1:88846380-88846399 Msa1224120:CDS 60.0%
!! CATCAGCCCTCTCTGGAGCA+CGG - chr8_1:88846390-88846409 None:intergenic 60.0%
TCGGTGATCCTCCAGGTTGC+TGG + chr8_1:88847493-88847512 Msa1224120:three_prime_UTR 60.0%
CGGTGATCCTCCAGGTTGCT+GGG + chr8_1:88847494-88847513 Msa1224120:three_prime_UTR 60.0%
GGCGCATTCTCCCACATGGG+TGG + chr8_1:88844699-88844718 Msa1224120:CDS 65.0%
AGGTCTGAGCTGGGAGCCGA+TGG + chr8_1:88844919-88844938 Msa1224120:CDS 65.0%
GCTGGGAGCCGATGGTCATG+TGG + chr8_1:88844927-88844946 Msa1224120:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 88841914 88847847 88841914 ID=Msa1224120;Name=Msa1224120
chr8_1 mRNA 88841914 88847847 88841914 ID=Msa1224120-mRNA-1;Parent=Msa1224120;Name=Msa1224120-mRNA-1;_AED=0.05;_eAED=0.05;_QI=128|1|1|1|0.84|0.78|14|399|870
chr8_1 exon 88841914 88842014 88841914 ID=Msa1224120-mRNA-1:exon:32257;Parent=Msa1224120-mRNA-1
chr8_1 exon 88842063 88842084 88842063 ID=Msa1224120-mRNA-1:exon:32258;Parent=Msa1224120-mRNA-1
chr8_1 exon 88842999 88843480 88842999 ID=Msa1224120-mRNA-1:exon:32259;Parent=Msa1224120-mRNA-1
chr8_1 exon 88843602 88843714 88843602 ID=Msa1224120-mRNA-1:exon:32260;Parent=Msa1224120-mRNA-1
chr8_1 exon 88843833 88843932 88843833 ID=Msa1224120-mRNA-1:exon:32261;Parent=Msa1224120-mRNA-1
chr8_1 exon 88844051 88844183 88844051 ID=Msa1224120-mRNA-1:exon:32262;Parent=Msa1224120-mRNA-1
chr8_1 exon 88844259 88844319 88844259 ID=Msa1224120-mRNA-1:exon:32263;Parent=Msa1224120-mRNA-1
chr8_1 exon 88844397 88845033 88844397 ID=Msa1224120-mRNA-1:exon:32264;Parent=Msa1224120-mRNA-1
chr8_1 exon 88845476 88845805 88845476 ID=Msa1224120-mRNA-1:exon:32265;Parent=Msa1224120-mRNA-1
chr8_1 exon 88846283 88846693 88846283 ID=Msa1224120-mRNA-1:exon:32266;Parent=Msa1224120-mRNA-1
chr8_1 exon 88846777 88846849 88846777 ID=Msa1224120-mRNA-1:exon:32267;Parent=Msa1224120-mRNA-1
chr8_1 exon 88846928 88847013 88846928 ID=Msa1224120-mRNA-1:exon:32268;Parent=Msa1224120-mRNA-1
chr8_1 exon 88847103 88847222 88847103 ID=Msa1224120-mRNA-1:exon:32269;Parent=Msa1224120-mRNA-1
chr8_1 exon 88847377 88847847 88847377 ID=Msa1224120-mRNA-1:exon:32270;Parent=Msa1224120-mRNA-1
chr8_1 five_prime_UTR 88841914 88842014 88841914 ID=Msa1224120-mRNA-1:five_prime_utr;Parent=Msa1224120-mRNA-1
chr8_1 five_prime_UTR 88842063 88842084 88842063 ID=Msa1224120-mRNA-1:five_prime_utr;Parent=Msa1224120-mRNA-1
chr8_1 five_prime_UTR 88842999 88843003 88842999 ID=Msa1224120-mRNA-1:five_prime_utr;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88843004 88843480 88843004 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88843602 88843714 88843602 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88843833 88843932 88843833 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88844051 88844183 88844051 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88844259 88844319 88844259 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88844397 88845033 88844397 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88845476 88845805 88845476 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88846283 88846693 88846283 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88846777 88846849 88846777 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88846928 88847013 88846928 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88847103 88847222 88847103 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 CDS 88847377 88847448 88847377 ID=Msa1224120-mRNA-1:cds;Parent=Msa1224120-mRNA-1
chr8_1 three_prime_UTR 88847449 88847847 88847449 ID=Msa1224120-mRNA-1:three_prime_utr;Parent=Msa1224120-mRNA-1
Gene Sequence

>Msa1224120

ATGGAGGTAGTAGTTCCTAGACAAGAACAGTCAAATCAACATTCCGAGGATATGTTGAAGTTCTCTGGATGCGCAAAAGCTTTTGGAAATTCAAAGAGAAAGGCTGAAGAATTTCACGAGTGTGGTGGTAATGAGAAATCGGAACCAGAAGGAAAAGGAAATACTATGGGATGTTTGAAGGAGGATACAGTTTCACAAGAAAATTTTGGAATTTCACATAAGAGAAGATTTCAAGAATATCATACACATCATACCGATACAAATTCAAAAGGGCATAAAGATGTTCTGGAATGTTTAAAAGAGACGCCCAATCTAGCATCTAAGAAGAGAGATGGACCAAAGAAGCATGCTGCCTCAAAGAAGAAACAGAAACTTGAAGATGAACTCTTGCTTGACGAACTTGAACAAGATGAAGAAATGTTTTTTCTTCTTAAGACAAAGAGCAGGAGCAGAGCTGGTAGAATCGATAACATAACGGGTGTTCAACAAAATACCCGGAAATGTCATCAGTGCATGAAAAAGGAAAGAACATCTTTTGTGCCTTGCACTAAATGTTCAAAAATGTACTGTATGCGATGCATCAATCAATGGTACCCTGATATGTCTATAGAAGAAGTTGCTGAAAGTTGCCCATTTTGCATTAAAAATTGCAATTGCAATGTTTGCCTGCGTTCAAAAGGAACAATTAAGACATCTAACATGGACATCACCAATTATGAAAAAGCTCAGTATCTGCATTACATGATCAACTTACTCCTTCCATATCTGAAACAAATTTGTCATGAACAAAGTGTAGAGGAAGATATAGAAGCAAAAATACAAGGAAAATCTTCTGAGATTGAGATACCACAAAGTCTCTGTAGTGACAAGGAACGTGTCTATTGTGATCATTGTGCTACTTCAATCGTTGACCTTCATCGAATCTGCCCAAATTGTTCCTATGAGCTTTGCCTCAAATGTTGCAAAGAAATACGTGATGGAAGCATTACACCCCGAGCTGAGATGAAGTTCCAATATGTGAATAGGGGCTATGATTATATGCATGGTGGTGACCCTCTACCAGTGTCTTGTGATTTAGAGACTTCAAATTGTCATATATCTACCGAGTGTAATGCCAGGAGTGATGGAAGTGTTAGTTGTGTCCCAAAAGAAATGGGGGGTTGTGGTAGTTCTCTGTTGGAGCTGAGGCGCATTCTCCCACATGGGTGGATGTCTGCCTTGGAAGACAAAGCTCGCAGTATGCTGAAAATTTGGGAAATTGAACAAACTACTCTTCGGCATGAAGAAGATGTATCGAGCTATGGTTCAGAATCAAAAAGCAGTTTAAAAGAAGGGATGTTGCTCTTCCGAAAACATTGGACAAATGGTGAACCAATTATTGTTCGTGATGTTCTAAAACATGGGACAGGTCTGAGCTGGGAGCCGATGGTCATGTGGCGAGCATTGTGTGATAATGTGGCTTCAGATATCAGTTCAAAAATGTCAGAAGTGAAGGCCATCGATTGCATGGCTAATTGTGAGGTTGCAATTAATACTCGTATGTTCTTTAAAGGTTATATAGAGGGAAGAACATATAGTAATCTCTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCCCCTTCTGATAAATTTGAAGATCTTTTGCCCCGACATTGTGAAGAATTTATTCGTTTCTTGCCATTTCAACCGTATACTGATCCTCGGGCTGGAACTCTCAATCTGGCTGTAAAGTTGCCAGCCCATGTTCTAAAACCTGATATGGGTCCAAAAACATATATTGCTTATGGGATTAAAGAAGAACTTGGCAGGGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGCGGAGGTATTATTAACTGATAGGCAGAAGTCTACTATTTCCAATTTGAAAGAAGCACACAGAGCACAAGATGAGAGAGAACACCGTGCTCCAGAGAGGGCTGATGTATGCCTAAATGGTCGACCTTGCGACAACAGAGAACATATAGAAAATAAGGAGGTATTAGAGTGCAACAATATGGATAACCGTCCTATCGAAATCAGTGGAGATATCTTTCACAATGTGTCTGAGGGGGAAACTTTTCCTACCATTTCTACAGAAAATGAAACAATGGTAACAGGTAGTGCCCTGTGGGATATATTTCGGAGAGAGGACACTGAAAAGTTAGGAGCATATCTTAGAAAACACTCGAAAGAATTCAGGCATACTTATTGTTCACCGGTTGAGCAGGTTGTACATCCAATTCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAAGTTGAAGGAGGAGTTTGGTGTAGAACCGTGGACTTTTGAGCAAAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTTAAGTCGTGCACAAAGGTTGCTGTAGACTTTGTGTCCCCAGAAAATGTACATGAGTGTCTTCGTTTAACTGAAGAATTCCGTCAGCTTCCCAAGAAACACAAAGCTAGAGAAGATAAACTTGAGATACAGAAGATGATAGTTTATGCCATTGATCAAGCTGTCAAAGACCTAGAAGCTTTACTGAATTGTTCCTGA
Protein sequence

>Msa1224120

MEVVVPRQEQSNQHSEDMLKFSGCAKAFGNSKRKAEEFHECGGNEKSEPEGKGNTMGCLKEDTVSQENFGISHKRRFQEYHTHHTDTNSKGHKDVLECLKETPNLASKKRDGPKKHAASKKKQKLEDELLLDELEQDEEMFFLLKTKSRSRAGRIDNITGVQQNTRKCHQCMKKERTSFVPCTKCSKMYCMRCINQWYPDMSIEEVAESCPFCIKNCNCNVCLRSKGTIKTSNMDITNYEKAQYLHYMINLLLPYLKQICHEQSVEEDIEAKIQGKSSEIEIPQSLCSDKERVYCDHCATSIVDLHRICPNCSYELCLKCCKEIRDGSITPRAEMKFQYVNRGYDYMHGGDPLPVSCDLETSNCHISTECNARSDGSVSCVPKEMGGCGSSLLELRRILPHGWMSALEDKARSMLKIWEIEQTTLRHEEDVSSYGSESKSSLKEGMLLFRKHWTNGEPIIVRDVLKHGTGLSWEPMVMWRALCDNVASDISSKMSEVKAIDCMANCEVAINTRMFFKGYIEGRTYSNLWPEMLKLKDWPPSDKFEDLLPRHCEEFIRFLPFQPYTDPRAGTLNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVLLTDRQKSTISNLKEAHRAQDEREHRAPERADVCLNGRPCDNREHIENKEVLECNNMDNRPIEISGDIFHNVSEGETFPTISTENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTEEFRQLPKKHKAREDKLEIQKMIVYAIDQAVKDLEALLNCS*