Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224170 | XP_039689163.1 | 93.103 | 58 | 4 | 0 | 2 | 59 | 3 | 60 | 4.54e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224170 | G7JJA9 | 94.643 | 56 | 3 | 0 | 4 | 59 | 1 | 56 | 2.76e-26 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0791390 | Msa1224170 | 0.809579 | 1.764820e-50 | -8.615850e-47 |
| Msa0277960 | Msa1224170 | 0.809677 | 1.681096e-50 | -8.615850e-47 |
| Msa1181140 | Msa1224170 | 0.810731 | 9.961238e-51 | -8.615850e-47 |
| Msa1214840 | Msa1224170 | 0.807350 | 5.277332e-50 | -8.615850e-47 |
| Msa1224120 | Msa1224170 | 0.848204 | 7.113867e-60 | -8.615850e-47 |
| Msa1224170 | Msa1263430 | 0.989927 | 2.850111e-180 | -8.615850e-47 |
| Msa1224170 | Msa1387680 | 0.995065 | 1.068948e-212 | -8.615850e-47 |
| Msa1224170 | Msa1410800 | 0.997259 | 1.821994e-239 | -8.615850e-47 |
| Msa0525770 | Msa1224170 | 0.819933 | 8.952836e-53 | -8.615850e-47 |
| Msa0576900 | Msa1224170 | 0.830777 | 2.426526e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224170 | MtrunA17_Chr4g0075261 | 94.643 | 56 | 3 | 0 | 4 | 59 | 1 | 56 | 5.31e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 198 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACTCGTATGTTCTTTAA+AGG | 0.110692 | 8_1:-88927175 | Msa1224170:three_prime_UTR |
| CAAATTTCACAAGAAAATTT+TGG | 0.132368 | 8_1:-88929468 | Msa1224170:CDS |
| TTCTCTAGCTTTGTGTTTCT+TGG | 0.148326 | 8_1:+88925473 | None:intergenic |
| CTCGCAGTATGCTGAAAATT+TGG | 0.155349 | 8_1:-88927915 | Msa1224170:three_prime_UTR |
| CCATGTTCTAAAACCTGATA+TGG | 0.202757 | 8_1:-88926966 | Msa1224170:three_prime_UTR |
| TTTGAGGCAGCATGCTTCTT+TGG | 0.209357 | 8_1:+88929318 | None:intergenic |
| AGAACATCACGAACAATAAT+TGG | 0.212049 | 8_1:+88927775 | None:intergenic |
| AAGAAAAGTATTATCAATTA+TGG | 0.214358 | 8_1:-88924968 | Msa1224170:three_prime_UTR |
| TCTGGATGCGCAAAAGCTTT+TGG | 0.237412 | 8_1:-88929599 | Msa1224170:CDS |
| CAAAGCTCATAGGAACAATT+TGG | 0.255616 | 8_1:+88928219 | None:intergenic |
| TCATGCACTGATGACATTTC+CGG | 0.257622 | 8_1:+88929039 | None:intergenic |
| CAGAGAACATATAGAAAATA+AGG | 0.299885 | 8_1:-88926223 | Msa1224170:three_prime_UTR |
| TCGGTGATCCTCCAGGTTGC+TGG | 0.309818 | 8_1:-88925168 | Msa1224170:three_prime_UTR |
| TGTCGCAAGGTCGACCATTT+AGG | 0.315353 | 8_1:+88926247 | None:intergenic |
| GAAGTTCCAATATGTGAATA+GGG | 0.316073 | 8_1:-88928142 | Msa1224170:three_prime_UTR |
| TGACAAATTTGTTTCAGATA+TGG | 0.324144 | 8_1:+88928538 | None:intergenic |
| ACTTCTTCTATAGACATATC+AGG | 0.326397 | 8_1:+88928821 | None:intergenic |
| AGGGCTGATGTATGCCTAAA+TGG | 0.327833 | 8_1:-88926261 | Msa1224170:three_prime_UTR |
| TGATTGCCTGTATTTCCTTT+TGG | 0.333565 | 8_1:+88924937 | None:intergenic |
| ATGTCATCAGTGCATGAAAA+AGG | 0.335195 | 8_1:-88929033 | Msa1224170:three_prime_UTR |
| AAGTTTCTGTTTCTTCTTTG+AGG | 0.339318 | 8_1:+88929302 | None:intergenic |
| AAGAAGTTGAAGGAGGAGTT+TGG | 0.343772 | 8_1:-88925833 | Msa1224170:intron |
| CATGCACTGATGACATTTCC+GGG | 0.344655 | 8_1:+88929040 | None:intergenic |
| GCGTTCAAAAGGAACAATTA+AGG | 0.347282 | 8_1:-88928747 | Msa1224170:intron |
| TGAAGTTCCAATATGTGAAT+AGG | 0.348367 | 8_1:-88928143 | Msa1224170:three_prime_UTR |
| AATAAATTCTTCACAATGTC+GGG | 0.349503 | 8_1:+88927060 | None:intergenic |
| CATAGCCCCTATTCACATAT+TGG | 0.366484 | 8_1:+88928136 | None:intergenic |
| TCTCTAGCTTTGTGTTTCTT+GGG | 0.369110 | 8_1:+88925474 | None:intergenic |
| GGTATTAGAGTGCAACAATA+TGG | 0.378136 | 8_1:-88926199 | Msa1224170:three_prime_UTR |
| GAAAACACTCGAAAGAATTC+AGG | 0.382065 | 8_1:-88926017 | Msa1224170:three_prime_UTR |
| CATTATAATACCTGCTCAAC+CGG | 0.384038 | 8_1:+88925979 | None:intergenic |
| AACAATTCAGTAAAGCTTCT+AGG | 0.385507 | 8_1:+88925240 | None:intergenic |
| GAAAATGAAACAATGGTAAC+AGG | 0.395384 | 8_1:-88926099 | Msa1224170:three_prime_UTR |
| GTGCCCTGTGGGATATATTT+CGG | 0.395741 | 8_1:-88926074 | Msa1224170:three_prime_UTR |
| TCTCTTCTTAGATGCTAGAT+TGG | 0.395903 | 8_1:+88929347 | None:intergenic |
| CTGGGAGTGTAAACAGCGTT+CGG | 0.400054 | 8_1:-88925149 | Msa1224170:three_prime_UTR |
| TTGTGTTGTGGTTATTTAGA+AGG | 0.400347 | 8_1:-88924899 | Msa1224170:three_prime_UTR |
| TTAATAATACCTCCGCTGTA+TGG | 0.402466 | 8_1:+88926364 | None:intergenic |
| GAGGATATGTTGAAGTTCTC+TGG | 0.404767 | 8_1:-88929617 | Msa1224170:CDS |
| TCTGTGTGCTTCTTTCAAAT+TGG | 0.411095 | 8_1:+88926317 | None:intergenic |
| AAAAGGGCATAAAGATGTTC+TGG | 0.411429 | 8_1:-88929388 | Msa1224170:CDS |
| TTGTCACTACAGAGACTTTG+TGG | 0.411737 | 8_1:+88928377 | None:intergenic |
| TCGCAGTATGCTGAAAATTT+GGG | 0.419890 | 8_1:-88927914 | Msa1224170:three_prime_UTR |
| CGGAGGTATTATTAACTGAT+AGG | 0.429669 | 8_1:-88926356 | Msa1224170:three_prime_UTR |
| TAGTTGTGTCCCAAAAGAAA+TGG | 0.431073 | 8_1:-88928013 | Msa1224170:three_prime_UTR |
| CTCTTCTTAGATGCTAGATT+GGG | 0.431195 | 8_1:+88929348 | None:intergenic |
| CATACCGATACAAATTCAAA+AGG | 0.431375 | 8_1:-88929405 | Msa1224170:CDS |
| AGAGAGGACACTGAAAAGTT+AGG | 0.433154 | 8_1:-88926051 | Msa1224170:three_prime_UTR |
| ACATTTGAGGCAAAGCTCAT+AGG | 0.433228 | 8_1:+88928209 | None:intergenic |
| CCAGCCCGAGGATCAGTATA+CGG | 0.441774 | 8_1:+88927019 | None:intergenic |
| TCCTTAGTCGGTGATCCTCC+AGG | 0.443269 | 8_1:-88925175 | Msa1224170:three_prime_UTR |
| AGGCATACATCAGCCCTCTC+TGG | 0.443538 | 8_1:+88926267 | None:intergenic |
| TGTTGATTCTACAGTAAGAA+TGG | 0.445850 | 8_1:-88929681 | Msa1224170:intron |
| CAAGCAACATTCAGCCAGTC+AGG | 0.447609 | 8_1:+88925217 | None:intergenic |
| ATGGATGAGGAGGAGGATGA+AGG | 0.451575 | 8_1:-88929497 | Msa1224170:CDS |
| TTCATGCCAAAAGGAAATAC+AGG | 0.454483 | 8_1:-88924943 | Msa1224170:three_prime_UTR |
| GTATTTCTTTGCAACATTTG+AGG | 0.457251 | 8_1:+88928196 | None:intergenic |
| AAAGCTCATAGGAACAATTT+GGG | 0.457327 | 8_1:+88928220 | None:intergenic |
| TTGGAACTTCATCTCAGCTC+GGG | 0.458986 | 8_1:+88928155 | None:intergenic |
| AATGTTTGCCTGCGTTCAAA+AGG | 0.459522 | 8_1:-88928758 | Msa1224170:three_prime_UTR |
| TTCCGAAAACATTGGACAAA+TGG | 0.462884 | 8_1:-88927802 | Msa1224170:three_prime_UTR |
| AGTTGTGTCCCAAAAGAAAT+GGG | 0.463161 | 8_1:-88928012 | Msa1224170:three_prime_UTR |
| AACATGGGACAGGTCTGAGC+TGG | 0.463529 | 8_1:-88927750 | Msa1224170:three_prime_UTR |
| GTCTTTGACAGCTTGATCAA+TGG | 0.468451 | 8_1:+88925262 | None:intergenic |
| CTGGATGCCCACATCAAGTC+AGG | 0.469410 | 8_1:-88925679 | Msa1224170:three_prime_UTR |
| AAAAGGAATGGATGAGGAGG+AGG | 0.470155 | 8_1:-88929504 | Msa1224170:CDS |
| GGATCAGTATACGGTTGAAA+TGG | 0.473452 | 8_1:+88927028 | None:intergenic |
| GATCTTCAAATTTATCAGAA+GGG | 0.473985 | 8_1:+88927089 | None:intergenic |
| ACAAAGAGCAGGAGCAGAGC+TGG | 0.474771 | 8_1:-88929219 | Msa1224170:three_prime_UTR |
| GTTCTTTAAAGGTTATATAG+AGG | 0.476754 | 8_1:-88927164 | Msa1224170:three_prime_UTR |
| TGGGAGTGTAAACAGCGTTC+GGG | 0.479231 | 8_1:-88925148 | Msa1224170:three_prime_UTR |
| GTGTGGTGGTAATGAGAAAT+CGG | 0.481094 | 8_1:-88929543 | Msa1224170:CDS |
| TGATTTGACTGTTCTTGTCT+AGG | 0.483352 | 8_1:+88929647 | None:intergenic |
| GGGTTGTGGTAGTTCTCTGT+TGG | 0.483953 | 8_1:-88927989 | Msa1224170:three_prime_UTR |
| GAGGCAGTATTTATTCCTGC+TGG | 0.484620 | 8_1:-88925698 | Msa1224170:three_prime_UTR |
| TAAAATTTAACATTGACAAA+AGG | 0.484754 | 8_1:+88925060 | None:intergenic |
| CGGTGATCCTCCAGGTTGCT+GGG | 0.486711 | 8_1:-88925167 | Msa1224170:three_prime_UTR |
| GTGACAAGGAACGTGTCTAT+TGG | 0.486752 | 8_1:-88928361 | Msa1224170:intron |
| ACCTGGAGGATCACCGACTA+AGG | 0.491786 | 8_1:+88925174 | None:intergenic |
| TCGGGCTGGAACTCTCAATC+TGG | 0.493514 | 8_1:-88927005 | Msa1224170:three_prime_UTR |
| GGATTAAAGAAGAACTTGGC+AGG | 0.496045 | 8_1:-88926919 | Msa1224170:three_prime_UTR |
| TTCTTTAAAGGTTATATAGA+GGG | 0.499890 | 8_1:-88927163 | Msa1224170:three_prime_UTR |
| TTATTGTTCACCGGTTGAGC+AGG | 0.500773 | 8_1:-88925989 | Msa1224170:intron |
| AAATCGGAACCAGAAGGAAA+AGG | 0.500939 | 8_1:-88929527 | Msa1224170:CDS |
| CTGAGGCGCATTCTCCCACA+TGG | 0.504365 | 8_1:-88927964 | Msa1224170:three_prime_UTR |
| ACATCAAGTCAGGAATCTTA+AGG | 0.504379 | 8_1:-88925669 | Msa1224170:intron |
| CAGGCATACTTATTGTTCAC+CGG | 0.508030 | 8_1:-88925998 | Msa1224170:three_prime_UTR |
| GAAGAACATATAGTAATCTC+TGG | 0.510135 | 8_1:-88927141 | Msa1224170:three_prime_UTR |
| AAATTGAACAAACTACTCTT+CGG | 0.511155 | 8_1:-88927891 | Msa1224170:three_prime_UTR |
| TTTACTGAATTGTTCCTGAC+TGG | 0.511371 | 8_1:-88925231 | Msa1224170:three_prime_UTR |
| ACATGGGTGGATGTCTGCCT+TGG | 0.513331 | 8_1:-88927947 | Msa1224170:three_prime_UTR |
| GGAGCACAAGAAGAAGTTGA+AGG | 0.513811 | 8_1:-88925843 | Msa1224170:three_prime_UTR |
| AGGTCTGAGCTGGGAGCCGA+TGG | 0.514364 | 8_1:-88927740 | Msa1224170:three_prime_UTR |
| TAATAATACCTCCGCTGTAT+GGG | 0.515560 | 8_1:+88926365 | None:intergenic |
| ATTATGGTATTCATGCCAAA+AGG | 0.517551 | 8_1:-88924952 | Msa1224170:three_prime_UTR |
| GAACCAGAAGGAAAAGGAAA+AGG | 0.517556 | 8_1:-88929521 | Msa1224170:CDS |
| AGATCTTCAAATTTATCAGA+AGG | 0.521629 | 8_1:+88927088 | None:intergenic |
| ACTTGATGTGGGCATCCAGC+AGG | 0.524603 | 8_1:+88925683 | None:intergenic |
| GTTCGTGATGTTCTAAAACA+TGG | 0.525158 | 8_1:-88927766 | Msa1224170:three_prime_UTR |
| CTCTCCGAAATATATCCCAC+AGG | 0.525312 | 8_1:+88926070 | None:intergenic |
| TTCAACCGTATACTGATCCT+CGG | 0.526738 | 8_1:-88927024 | Msa1224170:three_prime_UTR |
| AGGAAAAGGAATGGATGAGG+AGG | 0.527063 | 8_1:-88929507 | Msa1224170:CDS |
| AGTTTGAATGCTTCATTGAG+AGG | 0.529173 | 8_1:-88925111 | Msa1224170:three_prime_UTR |
| GAGTGTAATGCCAGGAGTGA+TGG | 0.530231 | 8_1:-88928042 | Msa1224170:three_prime_UTR |
| TTCGTGATGTTCTAAAACAT+GGG | 0.530753 | 8_1:-88927765 | Msa1224170:three_prime_UTR |
| ATCTTCAAATTTATCAGAAG+GGG | 0.535676 | 8_1:+88927090 | None:intergenic |
| CTACTTTCAGACATCTAACA+TGG | 0.537773 | 8_1:-88928617 | Msa1224170:intron |
| TGTGTTTCTTGGGAAGCTGA+CGG | 0.538542 | 8_1:+88925484 | None:intergenic |
| ATCTTTCACAATGTGTCTGA+GGG | 0.539751 | 8_1:-88926147 | Msa1224170:three_prime_UTR |
| TTCTTCTTAAGACAAAGAGC+AGG | 0.540103 | 8_1:-88929230 | Msa1224170:three_prime_UTR |
| AAAAGGAAAAGGAATGGATG+AGG | 0.543328 | 8_1:-88929510 | Msa1224170:CDS |
| GAAGAAGATGTATCGAGCTA+TGG | 0.550506 | 8_1:-88927865 | Msa1224170:three_prime_UTR |
| TATGGGATTAAAGAAGAACT+TGG | 0.552658 | 8_1:-88926923 | Msa1224170:three_prime_UTR |
| TTAAGATTCCTGACTTGATG+TGG | 0.553851 | 8_1:+88925671 | None:intergenic |
| AAATCACAAGACACTGGTAG+AGG | 0.557418 | 8_1:+88928093 | None:intergenic |
| GATGAGGAGGAGGATGAAGG+AGG | 0.558623 | 8_1:-88929494 | Msa1224170:CDS |
| ATATGTTCTCTGTTGTCGCA+AGG | 0.559696 | 8_1:+88926234 | None:intergenic |
| AGAAGGAAAAGGAAAAGGAA+TGG | 0.560229 | 8_1:-88929516 | Msa1224170:CDS |
| CTCCACTGATTTCGATAGGA+CGG | 0.560809 | 8_1:+88926172 | None:intergenic |
| GAATAAATTCTTCACAATGT+CGG | 0.560919 | 8_1:+88927059 | None:intergenic |
| CTAGCATCTAAGAAGAGAGA+TGG | 0.561973 | 8_1:-88929342 | Msa1224170:three_prime_UTR |
| ATTGGAACTTCATCTCAGCT+CGG | 0.562205 | 8_1:+88928154 | None:intergenic |
| TGTTGCTCTTCCGAAAACAT+TGG | 0.563196 | 8_1:-88927810 | Msa1224170:three_prime_UTR |
| GTATGCGATGCATCAATCAA+TGG | 0.564613 | 8_1:-88928965 | Msa1224170:intron |
| AATTTGGGCAGATTCGATGA+AGG | 0.564967 | 8_1:+88928235 | None:intergenic |
| AGATGCTGAAGCTAAAAGAC+TGG | 0.565379 | 8_1:-88927114 | Msa1224170:three_prime_UTR |
| TCAACCGTATACTGATCCTC+GGG | 0.565860 | 8_1:-88927023 | Msa1224170:three_prime_UTR |
| ACTAACACTTCCATCACTCC+TGG | 0.566645 | 8_1:+88928032 | None:intergenic |
| CGATTGCATGGCTAATTGTG+AGG | 0.570429 | 8_1:-88927647 | Msa1224170:intron |
| ACTGCGAGCTTTGTCTTCCA+AGG | 0.570985 | 8_1:+88927930 | None:intergenic |
| AGTGAAGGCCATCGATTGCA+TGG | 0.575237 | 8_1:-88927659 | Msa1224170:three_prime_UTR |
| AAATTTGTTTCAGATATGGA+AGG | 0.578176 | 8_1:+88928542 | None:intergenic |
| CATGTTCTAAAACCTGATAT+GGG | 0.578332 | 8_1:-88926965 | Msa1224170:three_prime_UTR |
| ACAATTAGCCATGCAATCGA+TGG | 0.580189 | 8_1:+88927651 | None:intergenic |
| TGTTTACACTCCCAGCAACC+TGG | 0.582518 | 8_1:+88925157 | None:intergenic |
| ATACCGATACAAATTCAAAA+GGG | 0.582996 | 8_1:-88929404 | Msa1224170:CDS |
| AGGGGCTATGATTATATGCA+TGG | 0.585379 | 8_1:-88928123 | Msa1224170:three_prime_UTR |
| GTAGTTCTCTGTTGGAGCTG+AGG | 0.590028 | 8_1:-88927981 | Msa1224170:three_prime_UTR |
| TTCTACAGAAAATGAAACAA+TGG | 0.590271 | 8_1:-88926106 | Msa1224170:three_prime_UTR |
| TATCTTTCACAATGTGTCTG+AGG | 0.590309 | 8_1:-88926148 | Msa1224170:three_prime_UTR |
| TTCTAAATAACCACAACACA+AGG | 0.590939 | 8_1:+88924901 | None:intergenic |
| GATGTTCTAAAACATGGGAC+AGG | 0.591339 | 8_1:-88927760 | Msa1224170:three_prime_UTR |
| GGCGCATTCTCCCACATGGG+TGG | 0.591623 | 8_1:-88927960 | Msa1224170:three_prime_UTR |
| TATCTACCGAGTGTAATGCC+AGG | 0.591693 | 8_1:-88928050 | Msa1224170:three_prime_UTR |
| ACATGGGACAGGTCTGAGCT+GGG | 0.594876 | 8_1:-88927749 | Msa1224170:three_prime_UTR |
| ATATCTCCACTGATTTCGAT+AGG | 0.597449 | 8_1:+88926168 | None:intergenic |
| GAGAACACCGTGCTCCAGAG+AGG | 0.597552 | 8_1:-88926281 | Msa1224170:three_prime_UTR |
| TATACAGTGTCCTTGTGTTG+TGG | 0.598493 | 8_1:-88924911 | Msa1224170:three_prime_UTR |
| AGAGAACTTCAACATATCCT+CGG | 0.600419 | 8_1:+88929619 | None:intergenic |
| AATGCTCGCCACATGACCAT+CGG | 0.603094 | 8_1:+88927724 | None:intergenic |
| TAAGATTCCTGACTTGATGT+GGG | 0.603534 | 8_1:+88925672 | None:intergenic |
| ATTTAGAAGGATGCAAGAGG+TGG | 0.604972 | 8_1:-88924886 | Msa1224170:three_prime_UTR |
| AGAACACCGTGCTCCAGAGA+GGG | 0.606805 | 8_1:-88926280 | Msa1224170:three_prime_UTR |
| TGTTGCAAAGAAATACGTGA+TGG | 0.607475 | 8_1:-88928189 | Msa1224170:three_prime_UTR |
| CTTCTTCTATAGACATATCA+GGG | 0.611493 | 8_1:+88928822 | None:intergenic |
| ATCACTCCTGGCATTACACT+CGG | 0.613940 | 8_1:+88928044 | None:intergenic |
| GATTAAAGAAGAACTTGGCA+GGG | 0.616962 | 8_1:-88926918 | Msa1224170:three_prime_UTR |
| GGTAACAGGTAGTGCCCTGT+GGG | 0.617284 | 8_1:-88926085 | Msa1224170:three_prime_UTR |
| TTGTGTCCCAAAAGAAATGG+GGG | 0.617770 | 8_1:-88928010 | Msa1224170:three_prime_UTR |
| GTCTCTAAATCACAAGACAC+TGG | 0.619904 | 8_1:+88928087 | None:intergenic |
| GCTGAAGAATTTCACGAGTG+TGG | 0.620552 | 8_1:-88929560 | Msa1224170:CDS |
| TTGTCATGAACAAAGTGTAG+AGG | 0.621423 | 8_1:-88928521 | Msa1224170:three_prime_UTR |
| GCGAGCATTGTGTGATAATG+TGG | 0.622160 | 8_1:-88927710 | Msa1224170:three_prime_UTR |
| CATCAGCCCTCTCTGGAGCA+CGG | 0.622167 | 8_1:+88926274 | None:intergenic |
| AATGAGAAATCGGAACCAGA+AGG | 0.622864 | 8_1:-88929533 | Msa1224170:CDS |
| GTGGGATATATTTCGGAGAG+AGG | 0.626190 | 8_1:-88926067 | Msa1224170:three_prime_UTR |
| AAGTTCCAATATGTGAATAG+GGG | 0.632079 | 8_1:-88928141 | Msa1224170:three_prime_UTR |
| ATTAAAGAAGAACTTGGCAG+GGG | 0.632276 | 8_1:-88926917 | Msa1224170:three_prime_UTR |
| ACAGTCAAATCAACATTCCG+AGG | 0.632981 | 8_1:-88929636 | Msa1224170:CDS |
| TGGTAGAATCGATAACATAA+CGG | 0.633314 | 8_1:-88929199 | Msa1224170:intron |
| CTTTCACAATGTGTCTGAGG+GGG | 0.633363 | 8_1:-88926145 | Msa1224170:three_prime_UTR |
| TGAGGCGCATTCTCCCACAT+GGG | 0.633374 | 8_1:-88927963 | Msa1224170:three_prime_UTR |
| TCTTCAAATTTATCAGAAGG+GGG | 0.635024 | 8_1:+88927091 | None:intergenic |
| AACCGTCCTATCGAAATCAG+TGG | 0.635864 | 8_1:-88926174 | Msa1224170:three_prime_UTR |
| GTTATTTAGAAGGATGCAAG+AGG | 0.638290 | 8_1:-88924889 | Msa1224170:three_prime_UTR |
| TGGTAACAGGTAGTGCCCTG+TGG | 0.639563 | 8_1:-88926086 | Msa1224170:three_prime_UTR |
| AATCACAAGACACTGGTAGA+GGG | 0.646755 | 8_1:+88928094 | None:intergenic |
| AGGGTGTTCAACAAAATACC+CGG | 0.650067 | 8_1:-88929058 | Msa1224170:three_prime_UTR |
| GCACAAGAAGAAGTTGAAGG+AGG | 0.651643 | 8_1:-88925840 | Msa1224170:three_prime_UTR |
| GAAGAATTTCACGAGTGTGG+TGG | 0.651936 | 8_1:-88929557 | Msa1224170:CDS |
| AGATTGAGAGTTCCAGCCCG+AGG | 0.651977 | 8_1:+88927007 | None:intergenic |
| GTTGTGTCCCAAAAGAAATG+GGG | 0.654890 | 8_1:-88928011 | Msa1224170:three_prime_UTR |
| AGGCAGACATCCACCCATGT+GGG | 0.655161 | 8_1:+88927950 | None:intergenic |
| AAGGCAGACATCCACCCATG+TGG | 0.656813 | 8_1:+88927949 | None:intergenic |
| AACCTTGCAGTCGTGCACAA+AGG | 0.657614 | 8_1:-88925568 | Msa1224170:intron |
| GCTGGGAGCCGATGGTCATG+TGG | 0.662730 | 8_1:-88927732 | Msa1224170:three_prime_UTR |
| TGGAACTTCATCTCAGCTCG+GGG | 0.672240 | 8_1:+88928156 | None:intergenic |
| ACAAAGTCTCTGTAGTGACA+AGG | 0.677477 | 8_1:-88928375 | Msa1224170:three_prime_UTR |
| TGATTCTACAGTAAGAATGG+AGG | 0.678009 | 8_1:-88929678 | Msa1224170:intron |
| ATAAATTCTTCACAATGTCG+GGG | 0.685345 | 8_1:+88927061 | None:intergenic |
| AGAACATATAGAAAATAAGG+AGG | 0.686564 | 8_1:-88926220 | Msa1224170:three_prime_UTR |
| TCACTGTGATATGTCAGATG+CGG | 0.691771 | 8_1:-88926876 | Msa1224170:intron |
| TCTTTCACAATGTGTCTGAG+GGG | 0.694238 | 8_1:-88926146 | Msa1224170:three_prime_UTR |
| AGCTAGAGAAGATAAACTTG+AGG | 0.698411 | 8_1:-88925460 | Msa1224170:intron |
| TCTCCGAAATATATCCCACA+GGG | 0.704301 | 8_1:+88926071 | None:intergenic |
| TTACACTCCCAGCAACCTGG+AGG | 0.737160 | 8_1:+88925160 | None:intergenic |
| TGTGTCCCAAAAGAAATGGG+GGG | 0.738710 | 8_1:-88928009 | Msa1224170:three_prime_UTR |
| GGCTATGATTATATGCATGG+TGG | 0.762734 | 8_1:-88928120 | Msa1224170:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACAAAAACAAAAATAT+AGG | + | chr8_1:88926780-88926799 | None:intergenic | 10.0% |
| !!! | TACTATATAGTTTAATATTT+TGG | - | chr8_1:88926942-88926961 | Msa1224170:three_prime_UTR | 10.0% |
| !!! | TATTTTTTTACATATACTTA+GGG | + | chr8_1:88927785-88927804 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTACATATACTT+AGG | + | chr8_1:88927786-88927805 | None:intergenic | 10.0% |
| !! | AATAAAGAAAAACAAAAAAG+GGG | + | chr8_1:88925000-88925019 | None:intergenic | 15.0% |
| !! | CAATAAAGAAAAACAAAAAA+GGG | + | chr8_1:88925001-88925020 | None:intergenic | 15.0% |
| !! | ATTAAAATCAACTTTCATAA+AGG | + | chr8_1:88926111-88926130 | None:intergenic | 15.0% |
| !!! | TTATGAAAGTTGATTTTAAT+TGG | - | chr8_1:88926111-88926130 | Msa1224170:three_prime_UTR | 15.0% |
| !!! | TGTTGCTAATTTTTTAATAT+AGG | - | chr8_1:88926391-88926410 | Msa1224170:intron | 15.0% |
| !!! | ATAGTTTAATATTTTGGTTT+TGG | - | chr8_1:88926948-88926967 | Msa1224170:three_prime_UTR | 15.0% |
| !!! | ATTTTTTTACATATACTTAG+GGG | + | chr8_1:88927784-88927803 | None:intergenic | 15.0% |
| !!! | GTTCTTATTTGTAATTTTTA+TGG | - | chr8_1:88929298-88929317 | Msa1224170:three_prime_UTR | 15.0% |
| !! | AACAATTATATGAAATAGTA+TGG | + | chr8_1:88929436-88929455 | None:intergenic | 15.0% |
| !! | TAAAATTTAACATTGACAAA+AGG | + | chr8_1:88930181-88930200 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTATTATCAATTA+TGG | - | chr8_1:88930270-88930289 | Msa1224170:intron | 15.0% |
| !! | GCAATAAAGAAAAACAAAAA+AGG | + | chr8_1:88925002-88925021 | None:intergenic | 20.0% |
| !!! | TTTTGCATGTATATGTATTA+AGG | - | chr8_1:88925029-88925048 | Msa1224170:three_prime_UTR | 20.0% |
| !!! | CAAATTTCACAAGAAAATTT+TGG | - | chr8_1:88925770-88925789 | Msa1224170:intron | 20.0% |
| !!! | TGCAATTTTTAATGCAAAAT+GGG | + | chr8_1:88926455-88926474 | None:intergenic | 20.0% |
| !!! | TTGCAATTTTTAATGCAAAA+TGG | + | chr8_1:88926456-88926475 | None:intergenic | 20.0% |
| !! | AAAAGAATTTGAAGAGATAT+TGG | + | chr8_1:88926596-88926615 | None:intergenic | 20.0% |
| !!! | TTTTTTTACATATACTTAGG+GGG | + | chr8_1:88927783-88927802 | None:intergenic | 20.0% |
| !!! | ATACTATTTAGTTTGTTGAT+TGG | - | chr8_1:88927846-88927865 | Msa1224170:three_prime_UTR | 20.0% |
| !!! | TACTATTTAGTTTGTTGATT+GGG | - | chr8_1:88927847-88927866 | Msa1224170:three_prime_UTR | 20.0% |
| !! | CATTTATACAAATAAAGATC+TGG | + | chr8_1:88927902-88927921 | None:intergenic | 20.0% |
| !! | TTTAAGAAGAAATACTAAGA+TGG | + | chr8_1:88927954-88927973 | None:intergenic | 20.0% |
| !!! | TTCTTTAAAGGTTATATAGA+GGG | - | chr8_1:88928075-88928094 | Msa1224170:three_prime_UTR | 20.0% |
| !! | CAAAAACATATATTGCTTAT+GGG | - | chr8_1:88928298-88928317 | Msa1224170:intron | 20.0% |
| !! | TTTATGGAGAAAATATTCAA+TGG | + | chr8_1:88928449-88928468 | None:intergenic | 20.0% |
| !! | GTCTAAAAGGAATTATTATA+TGG | - | chr8_1:88928589-88928608 | Msa1224170:three_prime_UTR | 20.0% |
| !! | AAAAGGAATTATTATATGGT+TGG | - | chr8_1:88928593-88928612 | Msa1224170:three_prime_UTR | 20.0% |
| !! | TTAGTTATTAATGTGAATCT+CGG | - | chr8_1:88929475-88929494 | Msa1224170:CDS | 20.0% |
| !!! | ATATTTTCATTTTCTACATG+TGG | - | chr8_1:88929894-88929913 | Msa1224170:intron | 20.0% |
| !!! | AAAATTTTAGTATGCTTGTT+TGG | - | chr8_1:88930391-88930410 | Msa1224170:intron | 20.0% |
| !!! | GTACATAAGCTATTTCTATT+GGG | - | chr8_1:88925131-88925150 | Msa1224170:three_prime_UTR | 25.0% |
| !! | ATGATCTAGATTATGGTTTT+TGG | - | chr8_1:88925504-88925523 | Msa1224170:three_prime_UTR | 25.0% |
| !!! | TTTTGGAAATTCAAAGAGAA+AGG | - | chr8_1:88925656-88925675 | Msa1224170:intron | 25.0% |
| ! | ATACCGATACAAATTCAAAA+GGG | - | chr8_1:88925834-88925853 | Msa1224170:three_prime_UTR | 25.0% |
| !! | ATTTTTGAACATTTAGTGCA+AGG | + | chr8_1:88926248-88926267 | None:intergenic | 25.0% |
| ! | TCATCACAGAATTTCATTAA+GGG | + | chr8_1:88926539-88926558 | None:intergenic | 25.0% |
| ! | TTCATCACAGAATTTCATTA+AGG | + | chr8_1:88926540-88926559 | None:intergenic | 25.0% |
| ! | AATTTGAAGAGATATTGGTA+TGG | + | chr8_1:88926591-88926610 | None:intergenic | 25.0% |
| !!! | ATACTGAGCTTTTTCATAAT+TGG | + | chr8_1:88926653-88926672 | None:intergenic | 25.0% |
| !! | AAATTTGTTTCAGATATGGA+AGG | + | chr8_1:88926699-88926718 | None:intergenic | 25.0% |
| !! | TGACAAATTTGTTTCAGATA+TGG | + | chr8_1:88926703-88926722 | None:intergenic | 25.0% |
| ! | GATATAGAAGCAAAAATACA+AGG | - | chr8_1:88926742-88926761 | Msa1224170:intron | 25.0% |
| ! | CAATAATAATCTCTTCTGTT+AGG | - | chr8_1:88926816-88926835 | Msa1224170:intron | 25.0% |
| ! | AAATTGAACAAACTACTCTT+CGG | - | chr8_1:88927347-88927366 | Msa1224170:intron | 25.0% |
| ! | TCAAAAAGCAGTTTAAAAGA+AGG | - | chr8_1:88927403-88927422 | Msa1224170:intron | 25.0% |
| ! | CAAAAAGCAGTTTAAAAGAA+GGG | - | chr8_1:88927404-88927423 | Msa1224170:intron | 25.0% |
| ! | ACTTTCAAACTGTAATAAAG+GGG | + | chr8_1:88927623-88927642 | None:intergenic | 25.0% |
| ! | GACTTTCAAACTGTAATAAA+GGG | + | chr8_1:88927624-88927643 | None:intergenic | 25.0% |
| ! | AGACTTTCAAACTGTAATAA+AGG | + | chr8_1:88927625-88927644 | None:intergenic | 25.0% |
| ! | ACTACAAATTTAAACATGCA+TGG | + | chr8_1:88927660-88927679 | None:intergenic | 25.0% |
| !!! | TGTGAATTTCTAGTTTTTCA+AGG | - | chr8_1:88927725-88927744 | Msa1224170:three_prime_UTR | 25.0% |
| !!! | TTTTTTACATATACTTAGGG+GGG | + | chr8_1:88927782-88927801 | None:intergenic | 25.0% |
| ! | AGACATTGCATATAATACAA+TGG | + | chr8_1:88927878-88927897 | None:intergenic | 25.0% |
| ! | AATACTCGTATGTTCTTTAA+AGG | - | chr8_1:88928063-88928082 | Msa1224170:three_prime_UTR | 25.0% |
| !! | GTTCTTTAAAGGTTATATAG+AGG | - | chr8_1:88928074-88928093 | Msa1224170:three_prime_UTR | 25.0% |
| ! | ATCTTCAAATTTATCAGAAG+GGG | + | chr8_1:88928151-88928170 | None:intergenic | 25.0% |
| ! | GATCTTCAAATTTATCAGAA+GGG | + | chr8_1:88928152-88928171 | None:intergenic | 25.0% |
| ! | AGATCTTCAAATTTATCAGA+AGG | + | chr8_1:88928153-88928172 | None:intergenic | 25.0% |
| ! | AATAAATTCTTCACAATGTC+GGG | + | chr8_1:88928181-88928200 | None:intergenic | 25.0% |
| ! | GAATAAATTCTTCACAATGT+CGG | + | chr8_1:88928182-88928201 | None:intergenic | 25.0% |
| !! | CCATAAGCAATATATGTTTT+TGG | + | chr8_1:88928300-88928319 | None:intergenic | 25.0% |
| ! | CCAAAAACATATATTGCTTA+TGG | - | chr8_1:88928297-88928316 | Msa1224170:intron | 25.0% |
| ! | AAAGCAATTAAATTACAGCT+CGG | + | chr8_1:88928404-88928423 | None:intergenic | 25.0% |
| !! | AAGAAGAATGAATGGATTTA+TGG | + | chr8_1:88928465-88928484 | None:intergenic | 25.0% |
| ! | TTACTGTGTCAAATTTCAAA+TGG | - | chr8_1:88928790-88928809 | Msa1224170:three_prime_UTR | 25.0% |
| !! | TCTAGTTTAATAATTGTCGT+AGG | - | chr8_1:88928838-88928857 | Msa1224170:intron | 25.0% |
| ! | CAGAGAACATATAGAAAATA+AGG | - | chr8_1:88929015-88929034 | Msa1224170:three_prime_UTR | 25.0% |
| ! | AGAACATATAGAAAATAAGG+AGG | - | chr8_1:88929018-88929037 | Msa1224170:three_prime_UTR | 25.0% |
| !! | TGTTTCATTTTCTGTAGAAA+TGG | + | chr8_1:88929131-88929150 | None:intergenic | 25.0% |
| ! | TTCTACAGAAAATGAAACAA+TGG | - | chr8_1:88929132-88929151 | Msa1224170:intron | 25.0% |
| !! | AATCAAATTCTTTGTTGGTT+AGG | - | chr8_1:88929332-88929351 | Msa1224170:three_prime_UTR | 25.0% |
| ! | TAAAAACATTGGTCATGAAT+TGG | + | chr8_1:88929366-88929385 | None:intergenic | 25.0% |
| ! | CCAAAGTCAAATAAAAACAT+TGG | + | chr8_1:88929377-88929396 | None:intergenic | 25.0% |
| !!! | CCAATGTTTTTATTTGACTT+TGG | - | chr8_1:88929374-88929393 | Msa1224170:exon | 25.0% |
| ! | CATTAATAACTAATAACTGC+AGG | + | chr8_1:88929468-88929487 | None:intergenic | 25.0% |
| ! | GTCAGTTTCAAATAAGTTAT+TGG | - | chr8_1:88929861-88929880 | Msa1224170:intron | 25.0% |
| ATATGTATTAAGGTCCTGTA+TGG | - | chr8_1:88925039-88925058 | Msa1224170:three_prime_UTR | 30.0% | |
| AATAAGTTGTCAATCCATAC+AGG | + | chr8_1:88925056-88925075 | None:intergenic | 30.0% | |
| !! | CGTACATAAGCTATTTCTAT+TGG | - | chr8_1:88925130-88925149 | Msa1224170:three_prime_UTR | 30.0% |
| TAAGTTCTGTGATACTGTTT+AGG | + | chr8_1:88925292-88925311 | None:intergenic | 30.0% | |
| AAAGCCATACTATAGACTTA+GGG | + | chr8_1:88925353-88925372 | None:intergenic | 30.0% | |
| GAGTGTTATGATCTAGATTA+TGG | - | chr8_1:88925497-88925516 | Msa1224170:three_prime_UTR | 30.0% | |
| !! | TGTTGATTCTACAGTAAGAA+TGG | - | chr8_1:88925557-88925576 | Msa1224170:three_prime_UTR | 30.0% |
| CATACCGATACAAATTCAAA+AGG | - | chr8_1:88925833-88925852 | Msa1224170:intron | 30.0% | |
| ! | ATGCCCTTTTGAATTTGTAT+CGG | + | chr8_1:88925840-88925859 | None:intergenic | 30.0% |
| ! | AAGTTTCTGTTTCTTCTTTG+AGG | + | chr8_1:88925939-88925958 | None:intergenic | 30.0% |
| TGGTAGAATCGATAACATAA+CGG | - | chr8_1:88926039-88926058 | Msa1224170:three_prime_UTR | 30.0% | |
| TAGTTAGTCAATTCTGCTAA+GGG | - | chr8_1:88926312-88926331 | Msa1224170:three_prime_UTR | 30.0% | |
| !!! | GTATCTGTTTTTTGTTTTCG+TGG | - | chr8_1:88926340-88926359 | Msa1224170:three_prime_UTR | 30.0% |
| CTTCTTCTATAGACATATCA+GGG | + | chr8_1:88926419-88926438 | None:intergenic | 30.0% | |
| ACTTCTTCTATAGACATATC+AGG | + | chr8_1:88926420-88926439 | None:intergenic | 30.0% | |
| CATCACAGAATTTCATTAAG+GGG | + | chr8_1:88926538-88926557 | None:intergenic | 30.0% | |
| ! | TGTCCTTTTACTTGAGATAA+TGG | - | chr8_1:88926904-88926923 | Msa1224170:three_prime_UTR | 30.0% |
| ATGCCATTATCTCAAGTAAA+AGG | + | chr8_1:88926910-88926929 | None:intergenic | 30.0% | |
| AAAGCTCATAGGAACAATTT+GGG | + | chr8_1:88927021-88927040 | None:intergenic | 30.0% | |
| GTATTTCTTTGCAACATTTG+AGG | + | chr8_1:88927045-88927064 | None:intergenic | 30.0% | |
| TGAAGTTCCAATATGTGAAT+AGG | - | chr8_1:88927095-88927114 | Msa1224170:three_prime_UTR | 30.0% | |
| GAAGTTCCAATATGTGAATA+GGG | - | chr8_1:88927096-88927115 | Msa1224170:three_prime_UTR | 30.0% | |
| AAGTTCCAATATGTGAATAG+GGG | - | chr8_1:88927097-88927116 | Msa1224170:three_prime_UTR | 30.0% | |
| AGAACATCACGAACAATAAT+TGG | + | chr8_1:88927466-88927485 | None:intergenic | 30.0% | |
| !! | TTCGTGATGTTCTAAAACAT+GGG | - | chr8_1:88927473-88927492 | Msa1224170:intron | 30.0% |
| TTCAAAAATGTCAGAAGTGA+AGG | - | chr8_1:88927564-88927583 | Msa1224170:intron | 30.0% | |
| CTTTCAAACTGTAATAAAGG+GGG | + | chr8_1:88927622-88927641 | None:intergenic | 30.0% | |
| CACTAATAGCATAGGTATTT+AGG | + | chr8_1:88927691-88927710 | None:intergenic | 30.0% | |
| CAAGAAAACACTAATAGCAT+AGG | + | chr8_1:88927699-88927718 | None:intergenic | 30.0% | |
| ACAGTATCAAAACACTCTTA+TGG | + | chr8_1:88927753-88927772 | None:intergenic | 30.0% | |
| ! | TTTTTACATATACTTAGGGG+GGG | + | chr8_1:88927781-88927800 | None:intergenic | 30.0% |
| AAATGAGATTCTACATGTTG+TGG | - | chr8_1:88927917-88927936 | Msa1224170:three_prime_UTR | 30.0% | |
| AAGAAATACTAAGATGGCAA+TGG | + | chr8_1:88927948-88927967 | None:intergenic | 30.0% | |
| GAAGAACATATAGTAATCTC+TGG | - | chr8_1:88928097-88928116 | Msa1224170:three_prime_UTR | 30.0% | |
| TCTTCAAATTTATCAGAAGG+GGG | + | chr8_1:88928150-88928169 | None:intergenic | 30.0% | |
| ATAAATTCTTCACAATGTCG+GGG | + | chr8_1:88928180-88928199 | None:intergenic | 30.0% | |
| !!! | CATATCAGGTTTTAGAACAT+GGG | + | chr8_1:88928274-88928293 | None:intergenic | 30.0% |
| !! | CATGTTCTAAAACCTGATAT+GGG | - | chr8_1:88928273-88928292 | Msa1224170:intron | 30.0% |
| TATGGGATTAAAGAAGAACT+TGG | - | chr8_1:88928315-88928334 | Msa1224170:intron | 30.0% | |
| ATGGAGAAAATATTCAATGG+AGG | + | chr8_1:88928446-88928465 | None:intergenic | 30.0% | |
| AACTTTAGATGTATTCAGGT+AGG | + | chr8_1:88928500-88928519 | None:intergenic | 30.0% | |
| ! | ATACATCTAAAGTTGCACAT+TGG | - | chr8_1:88928506-88928525 | Msa1224170:three_prime_UTR | 30.0% |
| TTCCACTTTACTTGTCTAAA+AGG | - | chr8_1:88928576-88928595 | Msa1224170:three_prime_UTR | 30.0% | |
| ! | TTCCTTTTAGACAAGTAAAG+TGG | + | chr8_1:88928581-88928600 | None:intergenic | 30.0% |
| ! | TCATTTTCTGTAGAAATGGT+AGG | + | chr8_1:88929127-88929146 | None:intergenic | 30.0% |
| GAAAATGAAACAATGGTAAC+AGG | - | chr8_1:88929139-88929158 | Msa1224170:intron | 30.0% | |
| GCTCAAATCAAATTCTTTGT+TGG | - | chr8_1:88929327-88929346 | Msa1224170:three_prime_UTR | 30.0% | |
| AGGTTTGACATATGATGATT+AGG | + | chr8_1:88929655-88929674 | None:intergenic | 30.0% | |
| TGAAACTGACATCATAATGA+GGG | + | chr8_1:88929851-88929870 | None:intergenic | 30.0% | |
| TTGAAACTGACATCATAATG+AGG | + | chr8_1:88929852-88929871 | None:intergenic | 30.0% | |
| AACAATTCAGTAAAGCTTCT+AGG | + | chr8_1:88930001-88930020 | None:intergenic | 30.0% | |
| !! | CTACTTCATTTTTCCTTAGT+CGG | - | chr8_1:88930051-88930070 | Msa1224170:intron | 30.0% |
| ATTATGGTATTCATGCCAAA+AGG | - | chr8_1:88930286-88930305 | Msa1224170:intron | 30.0% | |
| TTCTAAATAACCACAACACA+AGG | + | chr8_1:88930340-88930359 | None:intergenic | 30.0% | |
| TTGTGTTGTGGTTATTTAGA+AGG | - | chr8_1:88930339-88930358 | Msa1224170:intron | 30.0% | |
| TGAGTATGTGATAAGAGACT+AGG | - | chr8_1:88924838-88924857 | Msa1224170:three_prime_UTR | 35.0% | |
| TGATCAATCATTGTTCCAGT+AGG | - | chr8_1:88924872-88924891 | Msa1224170:three_prime_UTR | 35.0% | |
| ! | TTAACGAGTTGAAATCCTAC+TGG | + | chr8_1:88924890-88924909 | None:intergenic | 35.0% |
| GCTTATTTGAGTGTATCTAC+TGG | + | chr8_1:88925317-88925336 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr8_1:88925327-88925346 | Msa1224170:intron | 35.0% | |
| CAAAGCCATACTATAGACTT+AGG | + | chr8_1:88925354-88925373 | None:intergenic | 35.0% | |
| TGATTCTACAGTAAGAATGG+AGG | - | chr8_1:88925560-88925579 | Msa1224170:three_prime_UTR | 35.0% | |
| TGATTTGACTGTTCTTGTCT+AGG | + | chr8_1:88925594-88925613 | None:intergenic | 35.0% | |
| AGAGAACTTCAACATATCCT+CGG | + | chr8_1:88925622-88925641 | None:intergenic | 35.0% | |
| ! | ATTCCTTTTCCTTTTCCTTC+TGG | + | chr8_1:88925723-88925742 | None:intergenic | 35.0% |
| AGAAGGAAAAGGAAAAGGAA+TGG | - | chr8_1:88925722-88925741 | Msa1224170:three_prime_UTR | 35.0% | |
| AAAAGGAAAAGGAATGGATG+AGG | - | chr8_1:88925728-88925747 | Msa1224170:three_prime_UTR | 35.0% | |
| ! | AAAAGGGCATAAAGATGTTC+TGG | - | chr8_1:88925850-88925869 | Msa1224170:three_prime_UTR | 35.0% |
| CTCTTCTTAGATGCTAGATT+GGG | + | chr8_1:88925893-88925912 | None:intergenic | 35.0% | |
| TCTCTTCTTAGATGCTAGAT+TGG | + | chr8_1:88925894-88925913 | None:intergenic | 35.0% | |
| TTCTTCTTAAGACAAAGAGC+AGG | - | chr8_1:88926008-88926027 | Msa1224170:three_prime_UTR | 35.0% | |
| CTTTACTAATTGTCTCAGCA+GGG | - | chr8_1:88926161-88926180 | Msa1224170:three_prime_UTR | 35.0% | |
| ATGTCATCAGTGCATGAAAA+AGG | - | chr8_1:88926205-88926224 | Msa1224170:three_prime_UTR | 35.0% | |
| CTAGTTAGTCAATTCTGCTA+AGG | - | chr8_1:88926311-88926330 | Msa1224170:three_prime_UTR | 35.0% | |
| ! | TAATTGTTCCTTTTGAACGC+AGG | + | chr8_1:88926491-88926510 | None:intergenic | 35.0% |
| GCGTTCAAAAGGAACAATTA+AGG | - | chr8_1:88926491-88926510 | Msa1224170:intron | 35.0% | |
| CTACTTTCAGACATCTAACA+TGG | - | chr8_1:88926621-88926640 | Msa1224170:intron | 35.0% | |
| TTGTCATGAACAAAGTGTAG+AGG | - | chr8_1:88926717-88926736 | Msa1224170:intron | 35.0% | |
| CAAAGCTCATAGGAACAATT+TGG | + | chr8_1:88927022-88927041 | None:intergenic | 35.0% | |
| TGTTGCAAAGAAATACGTGA+TGG | - | chr8_1:88927049-88927068 | Msa1224170:three_prime_UTR | 35.0% | |
| TAGTTGTGTCCCAAAAGAAA+TGG | - | chr8_1:88927225-88927244 | Msa1224170:intron | 35.0% | |
| AGTTGTGTCCCAAAAGAAAT+GGG | - | chr8_1:88927226-88927245 | Msa1224170:intron | 35.0% | |
| TCGCAGTATGCTGAAAATTT+GGG | - | chr8_1:88927324-88927343 | Msa1224170:intron | 35.0% | |
| TTCCGAAAACATTGGACAAA+TGG | - | chr8_1:88927436-88927455 | Msa1224170:intron | 35.0% | |
| ! | CACCATTTGTCCAATGTTTT+CGG | + | chr8_1:88927441-88927460 | None:intergenic | 35.0% |
| !! | GTTCGTGATGTTCTAAAACA+TGG | - | chr8_1:88927472-88927491 | Msa1224170:intron | 35.0% |
| ! | TTTTACATATACTTAGGGGG+GGG | + | chr8_1:88927780-88927799 | None:intergenic | 35.0% |
| AAAGGTTTAGAAGGGTGAAT+TGG | + | chr8_1:88928030-88928049 | None:intergenic | 35.0% | |
| GTATTAATTGCAACCTGCAA+AGG | + | chr8_1:88928048-88928067 | None:intergenic | 35.0% | |
| !!! | CCATATCAGGTTTTAGAACA+TGG | + | chr8_1:88928275-88928294 | None:intergenic | 35.0% |
| !! | CCATGTTCTAAAACCTGATA+TGG | - | chr8_1:88928272-88928291 | Msa1224170:intron | 35.0% |
| !!! | TATGTTTTTGGACCCATATC+AGG | + | chr8_1:88928288-88928307 | None:intergenic | 35.0% |
| GATTAAAGAAGAACTTGGCA+GGG | - | chr8_1:88928320-88928339 | Msa1224170:intron | 35.0% | |
| ATTAAAGAAGAACTTGGCAG+GGG | - | chr8_1:88928321-88928340 | Msa1224170:intron | 35.0% | |
| AAATATTCAATGGAGGAGGA+TGG | + | chr8_1:88928439-88928458 | None:intergenic | 35.0% | |
| GAGAAAATATTCAATGGAGG+AGG | + | chr8_1:88928443-88928462 | None:intergenic | 35.0% | |
| CAGAGAGAAAGAAGAATGAA+TGG | + | chr8_1:88928473-88928492 | None:intergenic | 35.0% | |
| GTGCAACTTTAGATGTATTC+AGG | + | chr8_1:88928504-88928523 | None:intergenic | 35.0% | |
| ! | TGTGTCACTGTATTGTAATG+TGG | - | chr8_1:88928633-88928652 | Msa1224170:intron | 35.0% |
| ! | AGAAGTGCATACTATTCTCT+GGG | + | chr8_1:88928676-88928695 | None:intergenic | 35.0% |
| !!! | GAATATTTTGACCCATACAG+CGG | - | chr8_1:88928862-88928881 | Msa1224170:intron | 35.0% |
| TAATAATACCTCCGCTGTAT+GGG | + | chr8_1:88928876-88928895 | None:intergenic | 35.0% | |
| TTAATAATACCTCCGCTGTA+TGG | + | chr8_1:88928877-88928896 | None:intergenic | 35.0% | |
| !! | CGGAGGTATTATTAACTGAT+AGG | - | chr8_1:88928882-88928901 | Msa1224170:intron | 35.0% |
| TCTGTGTGCTTCTTTCAAAT+TGG | + | chr8_1:88928924-88928943 | None:intergenic | 35.0% | |
| GGTATTAGAGTGCAACAATA+TGG | - | chr8_1:88929039-88929058 | Msa1224170:three_prime_UTR | 35.0% | |
| !! | ATATCTCCACTGATTTCGAT+AGG | + | chr8_1:88929073-88929092 | None:intergenic | 35.0% |
| TATCTTTCACAATGTGTCTG+AGG | - | chr8_1:88929090-88929109 | Msa1224170:intron | 35.0% | |
| ATCTTTCACAATGTGTCTGA+GGG | - | chr8_1:88929091-88929110 | Msa1224170:intron | 35.0% | |
| GAAAACACTCGAAAGAATTC+AGG | - | chr8_1:88929221-88929240 | Msa1224170:three_prime_UTR | 35.0% | |
| CATTATAATACCTGCTCAAC+CGG | + | chr8_1:88929262-88929281 | None:intergenic | 35.0% | |
| ! | TAATGTGAATCTCGGCTTTT+AGG | - | chr8_1:88929483-88929502 | Msa1224170:CDS | 35.0% |
| ! | AGTTTTTGCTCAAAAGTCCA+CGG | + | chr8_1:88929516-88929535 | None:intergenic | 35.0% |
| ! | TGGACTTTTGAGCAAAAACT+TGG | - | chr8_1:88929516-88929535 | Msa1224170:CDS | 35.0% |
| ! | GGACTTTTGAGCAAAAACTT+GGG | - | chr8_1:88929517-88929536 | Msa1224170:CDS | 35.0% |
| ! | GACTTTTGAGCAAAAACTTG+GGG | - | chr8_1:88929518-88929537 | Msa1224170:CDS | 35.0% |
| ! | TAAGATTCCTGACTTGATGT+GGG | + | chr8_1:88929569-88929588 | None:intergenic | 35.0% |
| ! | TTAAGATTCCTGACTTGATG+TGG | + | chr8_1:88929570-88929589 | None:intergenic | 35.0% |
| ACATCAAGTCAGGAATCTTA+AGG | - | chr8_1:88929569-88929588 | Msa1224170:CDS | 35.0% | |
| ! | ACACTCATGTACATTTTCTG+GGG | + | chr8_1:88929714-88929733 | None:intergenic | 35.0% |
| ! | GACACTCATGTACATTTTCT+GGG | + | chr8_1:88929715-88929734 | None:intergenic | 35.0% |
| ! | AGACACTCATGTACATTTTC+TGG | + | chr8_1:88929716-88929735 | None:intergenic | 35.0% |
| !! | TCTCTAGCTTTGTGTTTCTT+GGG | + | chr8_1:88929767-88929786 | None:intergenic | 35.0% |
| !! | TTCTCTAGCTTTGTGTTTCT+TGG | + | chr8_1:88929768-88929787 | None:intergenic | 35.0% |
| AGCTAGAGAAGATAAACTTG+AGG | - | chr8_1:88929778-88929797 | Msa1224170:intron | 35.0% | |
| GAAACTGACATCATAATGAG+GGG | + | chr8_1:88929850-88929869 | None:intergenic | 35.0% | |
| TTTACTGAATTGTTCCTGAC+TGG | - | chr8_1:88930007-88930026 | Msa1224170:intron | 35.0% | |
| AGTTTGAATGCTTCATTGAG+AGG | - | chr8_1:88930127-88930146 | Msa1224170:intron | 35.0% | |
| !! | GCTTCATTGAGAGGTTTTAA+TGG | - | chr8_1:88930136-88930155 | Msa1224170:intron | 35.0% |
| TTCATGCCAAAAGGAAATAC+AGG | - | chr8_1:88930295-88930314 | Msa1224170:intron | 35.0% | |
| ! | TGATTGCCTGTATTTCCTTT+TGG | + | chr8_1:88930304-88930323 | None:intergenic | 35.0% |
| GTTATTTAGAAGGATGCAAG+AGG | - | chr8_1:88930349-88930368 | Msa1224170:intron | 35.0% | |
| ACAGTCAAATCAACATTCCG+AGG | - | chr8_1:88925602-88925621 | Msa1224170:intron | 40.0% | |
| GAGGATATGTTGAAGTTCTC+TGG | - | chr8_1:88925621-88925640 | Msa1224170:intron | 40.0% | |
| ! | GTGTGGTGGTAATGAGAAAT+CGG | - | chr8_1:88925695-88925714 | Msa1224170:three_prime_UTR | 40.0% |
| AATGAGAAATCGGAACCAGA+AGG | - | chr8_1:88925705-88925724 | Msa1224170:three_prime_UTR | 40.0% | |
| AAATCGGAACCAGAAGGAAA+AGG | - | chr8_1:88925711-88925730 | Msa1224170:three_prime_UTR | 40.0% | |
| GAACCAGAAGGAAAAGGAAA+AGG | - | chr8_1:88925717-88925736 | Msa1224170:three_prime_UTR | 40.0% | |
| CTAGCATCTAAGAAGAGAGA+TGG | - | chr8_1:88925896-88925915 | Msa1224170:intron | 40.0% | |
| !!! | GCTTTTGAAGTGCAGGAATT+AGG | + | chr8_1:88926083-88926102 | None:intergenic | 40.0% |
| !!! | GGTTTTAGCTTTTGAAGTGC+AGG | + | chr8_1:88926090-88926109 | None:intergenic | 40.0% |
| GCTTTACTAATTGTCTCAGC+AGG | - | chr8_1:88926160-88926179 | Msa1224170:three_prime_UTR | 40.0% | |
| ! | AGGGTGTTCAACAAAATACC+CGG | - | chr8_1:88926180-88926199 | Msa1224170:three_prime_UTR | 40.0% |
| ! | TCATGCACTGATGACATTTC+CGG | + | chr8_1:88926202-88926221 | None:intergenic | 40.0% |
| GTATGCGATGCATCAATCAA+TGG | - | chr8_1:88926273-88926292 | Msa1224170:three_prime_UTR | 40.0% | |
| CGATGCATCAATCAATGGTA+TGG | - | chr8_1:88926278-88926297 | Msa1224170:three_prime_UTR | 40.0% | |
| AATGTTTGCCTGCGTTCAAA+AGG | - | chr8_1:88926480-88926499 | Msa1224170:intron | 40.0% | |
| TTGTCACTACAGAGACTTTG+TGG | + | chr8_1:88926864-88926883 | None:intergenic | 40.0% | |
| ACAAAGTCTCTGTAGTGACA+AGG | - | chr8_1:88926863-88926882 | Msa1224170:intron | 40.0% | |
| AATTTGGGCAGATTCGATGA+AGG | + | chr8_1:88927006-88927025 | None:intergenic | 40.0% | |
| ! | ACATTTGAGGCAAAGCTCAT+AGG | + | chr8_1:88927032-88927051 | None:intergenic | 40.0% |
| ATTGGAACTTCATCTCAGCT+CGG | + | chr8_1:88927087-88927106 | None:intergenic | 40.0% | |
| CATAGCCCCTATTCACATAT+TGG | + | chr8_1:88927105-88927124 | None:intergenic | 40.0% | |
| AGGGGCTATGATTATATGCA+TGG | - | chr8_1:88927115-88927134 | Msa1224170:three_prime_UTR | 40.0% | |
| GGCTATGATTATATGCATGG+TGG | - | chr8_1:88927118-88927137 | Msa1224170:three_prime_UTR | 40.0% | |
| AATCACAAGACACTGGTAGA+GGG | + | chr8_1:88927147-88927166 | None:intergenic | 40.0% | |
| AAATCACAAGACACTGGTAG+AGG | + | chr8_1:88927148-88927167 | None:intergenic | 40.0% | |
| GTCTCTAAATCACAAGACAC+TGG | + | chr8_1:88927154-88927173 | None:intergenic | 40.0% | |
| GTTGTGTCCCAAAAGAAATG+GGG | - | chr8_1:88927227-88927246 | Msa1224170:intron | 40.0% | |
| TTGTGTCCCAAAAGAAATGG+GGG | - | chr8_1:88927228-88927247 | Msa1224170:intron | 40.0% | |
| CTCGCAGTATGCTGAAAATT+TGG | - | chr8_1:88927323-88927342 | Msa1224170:intron | 40.0% | |
| GAAGAAGATGTATCGAGCTA+TGG | - | chr8_1:88927373-88927392 | Msa1224170:intron | 40.0% | |
| TGTTGCTCTTCCGAAAACAT+TGG | - | chr8_1:88927428-88927447 | Msa1224170:intron | 40.0% | |
| !! | GATGTTCTAAAACATGGGAC+AGG | - | chr8_1:88927478-88927497 | Msa1224170:intron | 40.0% |
| ACAATTAGCCATGCAATCGA+TGG | + | chr8_1:88927590-88927609 | None:intergenic | 40.0% | |
| TTGTGTGTCAGTGTGTGTAT+AGG | - | chr8_1:88927819-88927838 | Msa1224170:three_prime_UTR | 40.0% | |
| TGTGTGTCAGTGTGTGTATA+GGG | - | chr8_1:88927820-88927839 | Msa1224170:three_prime_UTR | 40.0% | |
| ! | TTGTATTTTGTGCAGCATGC+CGG | - | chr8_1:88927996-88928015 | Msa1224170:three_prime_UTR | 40.0% |
| GGGTGAATTGGTTAGAATTC+CGG | + | chr8_1:88928018-88928037 | None:intergenic | 40.0% | |
| CAACCTGCAAAGGTTTAGAA+GGG | + | chr8_1:88928038-88928057 | None:intergenic | 40.0% | |
| !!! | TCTTTTAGCTTCAGCATCTC+TGG | + | chr8_1:88928123-88928142 | None:intergenic | 40.0% |
| AGATGCTGAAGCTAAAAGAC+TGG | - | chr8_1:88928124-88928143 | Msa1224170:three_prime_UTR | 40.0% | |
| GGATCAGTATACGGTTGAAA+TGG | + | chr8_1:88928213-88928232 | None:intergenic | 40.0% | |
| TTCAACCGTATACTGATCCT+CGG | - | chr8_1:88928214-88928233 | Msa1224170:three_prime_UTR | 40.0% | |
| GGATTAAAGAAGAACTTGGC+AGG | - | chr8_1:88928319-88928338 | Msa1224170:intron | 40.0% | |
| TCACTGTGATATGTCAGATG+CGG | - | chr8_1:88928362-88928381 | Msa1224170:three_prime_UTR | 40.0% | |
| ! | GAGAAGTGCATACTATTCTC+TGG | + | chr8_1:88928677-88928696 | None:intergenic | 40.0% |
| ACAACAAATGCACATCGCAT+GGG | + | chr8_1:88928756-88928775 | None:intergenic | 40.0% | |
| AACAACAAATGCACATCGCA+TGG | + | chr8_1:88928757-88928776 | None:intergenic | 40.0% | |
| ATATGTTCTCTGTTGTCGCA+AGG | + | chr8_1:88929007-88929026 | None:intergenic | 40.0% | |
| TCTTTCACAATGTGTCTGAG+GGG | - | chr8_1:88929092-88929111 | Msa1224170:intron | 40.0% | |
| TCTCCGAAATATATCCCACA+GGG | + | chr8_1:88929170-88929189 | None:intergenic | 40.0% | |
| AGAGAGGACACTGAAAAGTT+AGG | - | chr8_1:88929187-88929206 | Msa1224170:intron | 40.0% | |
| CAGGCATACTTATTGTTCAC+CGG | - | chr8_1:88929240-88929259 | Msa1224170:three_prime_UTR | 40.0% | |
| AAGAAGTTGAAGGAGGAGTT+TGG | - | chr8_1:88929405-88929424 | Msa1224170:CDS | 40.0% | |
| ! | TTTTGAGCAAAAACTTGGGG+AGG | - | chr8_1:88929521-88929540 | Msa1224170:CDS | 40.0% |
| GTCTTTGACAGCTTGATCAA+TGG | + | chr8_1:88929979-88929998 | None:intergenic | 40.0% | |
| TATACAGTGTCCTTGTGTTG+TGG | - | chr8_1:88930327-88930346 | Msa1224170:intron | 40.0% | |
| ATTTAGAAGGATGCAAGAGG+TGG | - | chr8_1:88930352-88930371 | Msa1224170:intron | 40.0% | |
| CTATAGACTTAGGGCCTGTT+TGG | + | chr8_1:88925344-88925363 | None:intergenic | 45.0% | |
| CAGGCCCTAAGTCTATAGTA+TGG | - | chr8_1:88925346-88925365 | Msa1224170:intron | 45.0% | |
| ! | TCTGGATGCGCAAAAGCTTT+TGG | - | chr8_1:88925639-88925658 | Msa1224170:intron | 45.0% |
| GCTGAAGAATTTCACGAGTG+TGG | - | chr8_1:88925678-88925697 | Msa1224170:three_prime_UTR | 45.0% | |
| GAAGAATTTCACGAGTGTGG+TGG | - | chr8_1:88925681-88925700 | Msa1224170:three_prime_UTR | 45.0% | |
| AGGAAAAGGAATGGATGAGG+AGG | - | chr8_1:88925731-88925750 | Msa1224170:three_prime_UTR | 45.0% | |
| AAAAGGAATGGATGAGGAGG+AGG | - | chr8_1:88925734-88925753 | Msa1224170:three_prime_UTR | 45.0% | |
| ! | TTTGAGGCAGCATGCTTCTT+TGG | + | chr8_1:88925923-88925942 | None:intergenic | 45.0% |
| ! | CATGCACTGATGACATTTCC+GGG | + | chr8_1:88926201-88926220 | None:intergenic | 45.0% |
| GTGACAAGGAACGTGTCTAT+TGG | - | chr8_1:88926877-88926896 | Msa1224170:three_prime_UTR | 45.0% | |
| TTGGAACTTCATCTCAGCTC+GGG | + | chr8_1:88927086-88927105 | None:intergenic | 45.0% | |
| TATCTACCGAGTGTAATGCC+AGG | - | chr8_1:88927188-88927207 | Msa1224170:intron | 45.0% | |
| ATCACTCCTGGCATTACACT+CGG | + | chr8_1:88927197-88927216 | None:intergenic | 45.0% | |
| ACTAACACTTCCATCACTCC+TGG | + | chr8_1:88927209-88927228 | None:intergenic | 45.0% | |
| TGTGTCCCAAAAGAAATGGG+GGG | - | chr8_1:88927229-88927248 | Msa1224170:intron | 45.0% | |
| ! | CACAACCCCCCATTTCTTTT+GGG | + | chr8_1:88927237-88927256 | None:intergenic | 45.0% |
| ! | GCGAGCATTGTGTGATAATG+TGG | - | chr8_1:88927528-88927547 | Msa1224170:intron | 45.0% |
| CGATTGCATGGCTAATTGTG+AGG | - | chr8_1:88927591-88927610 | Msa1224170:intron | 45.0% | |
| GCATGGCTAATTGTGAGGTT+TGG | - | chr8_1:88927596-88927615 | Msa1224170:intron | 45.0% | |
| TCACCCTTCTAAACCTTTGC+AGG | - | chr8_1:88928032-88928051 | Msa1224170:three_prime_UTR | 45.0% | |
| GCAACCTGCAAAGGTTTAGA+AGG | + | chr8_1:88928039-88928058 | None:intergenic | 45.0% | |
| TCAACCGTATACTGATCCTC+GGG | - | chr8_1:88928215-88928234 | Msa1224170:three_prime_UTR | 45.0% | |
| !!! | TCAGGTTTTAGAACATGGGC+TGG | + | chr8_1:88928270-88928289 | None:intergenic | 45.0% |
| ATGCACTTCTCTTGCTACAG+AGG | - | chr8_1:88928686-88928705 | Msa1224170:intron | 45.0% | |
| TGCACTTCTCTTGCTACAGA+GGG | - | chr8_1:88928687-88928706 | Msa1224170:intron | 45.0% | |
| !!! | TATTTTGACCCATACAGCGG+AGG | - | chr8_1:88928865-88928884 | Msa1224170:intron | 45.0% |
| AGGGCTGATGTATGCCTAAA+TGG | - | chr8_1:88928977-88928996 | Msa1224170:three_prime_UTR | 45.0% | |
| AACCGTCCTATCGAAATCAG+TGG | - | chr8_1:88929064-88929083 | Msa1224170:intron | 45.0% | |
| !! | CTCCACTGATTTCGATAGGA+CGG | + | chr8_1:88929069-88929088 | None:intergenic | 45.0% |
| CTTTCACAATGTGTCTGAGG+GGG | - | chr8_1:88929093-88929112 | Msa1224170:intron | 45.0% | |
| GTGCCCTGTGGGATATATTT+CGG | - | chr8_1:88929164-88929183 | Msa1224170:intron | 45.0% | |
| CTCTCCGAAATATATCCCAC+AGG | + | chr8_1:88929171-88929190 | None:intergenic | 45.0% | |
| GTGGGATATATTTCGGAGAG+AGG | - | chr8_1:88929171-88929190 | Msa1224170:intron | 45.0% | |
| ! | TTATTGTTCACCGGTTGAGC+AGG | - | chr8_1:88929249-88929268 | Msa1224170:three_prime_UTR | 45.0% |
| GGAGCACAAGAAGAAGTTGA+AGG | - | chr8_1:88929395-88929414 | Msa1224170:CDS | 45.0% | |
| GCACAAGAAGAAGTTGAAGG+AGG | - | chr8_1:88929398-88929417 | Msa1224170:CDS | 45.0% | |
| GAGGCAGTATTTATTCCTGC+TGG | - | chr8_1:88929540-88929559 | Msa1224170:CDS | 45.0% | |
| TGTGTTTCTTGGGAAGCTGA+CGG | + | chr8_1:88929757-88929776 | None:intergenic | 45.0% | |
| TGACATCATAATGAGGGGAG+TGG | + | chr8_1:88929845-88929864 | None:intergenic | 45.0% | |
| GACTTAGGGCCTGTTTGGAT+TGG | + | chr8_1:88925339-88925358 | None:intergenic | 50.0% | |
| ATGGATGAGGAGGAGGATGA+AGG | - | chr8_1:88925741-88925760 | Msa1224170:intron | 50.0% | |
| TGGAACTTCATCTCAGCTCG+GGG | + | chr8_1:88927085-88927104 | None:intergenic | 50.0% | |
| GAGTGTAATGCCAGGAGTGA+TGG | - | chr8_1:88927196-88927215 | Msa1224170:intron | 50.0% | |
| ! | CCACAACCCCCCATTTCTTT+TGG | + | chr8_1:88927238-88927257 | None:intergenic | 50.0% |
| CCAAAAGAAATGGGGGGTTG+TGG | - | chr8_1:88927235-88927254 | Msa1224170:intron | 50.0% | |
| GGGTTGTGGTAGTTCTCTGT+TGG | - | chr8_1:88927249-88927268 | Msa1224170:intron | 50.0% | |
| GTAGTTCTCTGTTGGAGCTG+AGG | - | chr8_1:88927257-88927276 | Msa1224170:intron | 50.0% | |
| ! | ACTGCGAGCTTTGTCTTCCA+AGG | + | chr8_1:88927311-88927330 | None:intergenic | 50.0% |
| AATGCTCGCCACATGACCAT+CGG | + | chr8_1:88927517-88927536 | None:intergenic | 50.0% | |
| ! | AGTGAAGGCCATCGATTGCA+TGG | - | chr8_1:88927579-88927598 | Msa1224170:intron | 50.0% |
| GCACTTCTCTTGCTACAGAG+GGG | - | chr8_1:88928688-88928707 | Msa1224170:intron | 50.0% | |
| CTTGCTACAGAGGGGAGATA+TGG | - | chr8_1:88928696-88928715 | Msa1224170:intron | 50.0% | |
| TGTCGCAAGGTCGACCATTT+AGG | + | chr8_1:88928994-88929013 | None:intergenic | 50.0% | |
| !! | GGCTTTTAGGTGTAGAACCG+TGG | - | chr8_1:88929496-88929515 | Msa1224170:CDS | 50.0% |
| AACCTTGCAGTCGTGCACAA+AGG | - | chr8_1:88929670-88929689 | Msa1224170:CDS | 50.0% | |
| AACCTTTGTGCACGACTGCA+AGG | + | chr8_1:88929675-88929694 | None:intergenic | 50.0% | |
| CAAGCAACATTCAGCCAGTC+AGG | + | chr8_1:88930024-88930043 | None:intergenic | 50.0% | |
| TGTTTACACTCCCAGCAACC+TGG | + | chr8_1:88930084-88930103 | None:intergenic | 50.0% | |
| ! | CTGGGAGTGTAAACAGCGTT+CGG | - | chr8_1:88930089-88930108 | Msa1224170:intron | 50.0% |
| ! | TGGGAGTGTAAACAGCGTTC+GGG | - | chr8_1:88930090-88930109 | Msa1224170:intron | 50.0% |
| GATGAGGAGGAGGATGAAGG+AGG | - | chr8_1:88925744-88925763 | Msa1224170:intron | 55.0% | |
| ACAAAGAGCAGGAGCAGAGC+TGG | - | chr8_1:88926019-88926038 | Msa1224170:three_prime_UTR | 55.0% | |
| TGAGGCGCATTCTCCCACAT+GGG | - | chr8_1:88927275-88927294 | Msa1224170:intron | 55.0% | |
| AGGCAGACATCCACCCATGT+GGG | + | chr8_1:88927291-88927310 | None:intergenic | 55.0% | |
| AAGGCAGACATCCACCCATG+TGG | + | chr8_1:88927292-88927311 | None:intergenic | 55.0% | |
| ACATGGGTGGATGTCTGCCT+TGG | - | chr8_1:88927291-88927310 | Msa1224170:intron | 55.0% | |
| AACATGGGACAGGTCTGAGC+TGG | - | chr8_1:88927488-88927507 | Msa1224170:intron | 55.0% | |
| ACATGGGACAGGTCTGAGCT+GGG | - | chr8_1:88927489-88927508 | Msa1224170:intron | 55.0% | |
| CCAGCCCGAGGATCAGTATA+CGG | + | chr8_1:88928222-88928241 | None:intergenic | 55.0% | |
| AGATTGAGAGTTCCAGCCCG+AGG | + | chr8_1:88928234-88928253 | None:intergenic | 55.0% | |
| ! | TCGGGCTGGAACTCTCAATC+TGG | - | chr8_1:88928233-88928252 | Msa1224170:three_prime_UTR | 55.0% |
| AGAACACCGTGCTCCAGAGA+GGG | - | chr8_1:88928958-88928977 | Msa1224170:intron | 55.0% | |
| AGGCATACATCAGCCCTCTC+TGG | + | chr8_1:88928974-88928993 | None:intergenic | 55.0% | |
| TGGTAACAGGTAGTGCCCTG+TGG | - | chr8_1:88929152-88929171 | Msa1224170:intron | 55.0% | |
| GGTAACAGGTAGTGCCCTGT+GGG | - | chr8_1:88929153-88929172 | Msa1224170:intron | 55.0% | |
| ACTTGATGTGGGCATCCAGC+AGG | + | chr8_1:88929558-88929577 | None:intergenic | 55.0% | |
| CTGGATGCCCACATCAAGTC+AGG | - | chr8_1:88929559-88929578 | Msa1224170:CDS | 55.0% | |
| TCCTTAGTCGGTGATCCTCC+AGG | - | chr8_1:88930063-88930082 | Msa1224170:intron | 55.0% | |
| ! | ACCTGGAGGATCACCGACTA+AGG | + | chr8_1:88930067-88930086 | None:intergenic | 55.0% |
| TTACACTCCCAGCAACCTGG+AGG | + | chr8_1:88930081-88930100 | None:intergenic | 55.0% | |
| CTGAGGCGCATTCTCCCACA+TGG | - | chr8_1:88927274-88927293 | Msa1224170:intron | 60.0% | |
| CCGTATACTGATCCTCGGGC+TGG | - | chr8_1:88928219-88928238 | Msa1224170:three_prime_UTR | 60.0% | |
| GAGAACACCGTGCTCCAGAG+AGG | - | chr8_1:88928957-88928976 | Msa1224170:intron | 60.0% | |
| !! | CATCAGCCCTCTCTGGAGCA+CGG | + | chr8_1:88928967-88928986 | None:intergenic | 60.0% |
| TCGGTGATCCTCCAGGTTGC+TGG | - | chr8_1:88930070-88930089 | Msa1224170:intron | 60.0% | |
| CGGTGATCCTCCAGGTTGCT+GGG | - | chr8_1:88930071-88930090 | Msa1224170:intron | 60.0% | |
| GGCGCATTCTCCCACATGGG+TGG | - | chr8_1:88927278-88927297 | Msa1224170:intron | 65.0% | |
| AGGTCTGAGCTGGGAGCCGA+TGG | - | chr8_1:88927498-88927517 | Msa1224170:intron | 65.0% | |
| GCTGGGAGCCGATGGTCATG+TGG | - | chr8_1:88927506-88927525 | Msa1224170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 88924837 | 88930423 | 88924837 | ID=Msa1224170;Name=Msa1224170 |
| chr8_1 | mRNA | 88924837 | 88930423 | 88924837 | ID=Msa1224170-mRNA-1;Parent=Msa1224170;Name=Msa1224170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.91|0.92|0.92|1|0.92|13|2713|104 |
| chr8_1 | exon | 88924837 | 88925306 | 88924837 | ID=Msa1224170-mRNA-1:exon:32315;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88925461 | 88925580 | 88925461 | ID=Msa1224170-mRNA-1:exon:32314;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88925670 | 88925755 | 88925670 | ID=Msa1224170-mRNA-1:exon:32313;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88925834 | 88925906 | 88925834 | ID=Msa1224170-mRNA-1:exon:32312;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88925990 | 88926400 | 88925990 | ID=Msa1224170-mRNA-1:exon:32311;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88926877 | 88927206 | 88926877 | ID=Msa1224170-mRNA-1:exon:32310;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88927648 | 88928284 | 88927648 | ID=Msa1224170-mRNA-1:exon:32309;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88928362 | 88928422 | 88928362 | ID=Msa1224170-mRNA-1:exon:32308;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88928497 | 88928629 | 88928497 | ID=Msa1224170-mRNA-1:exon:32307;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88928748 | 88928847 | 88928748 | ID=Msa1224170-mRNA-1:exon:32306;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88928966 | 88929078 | 88928966 | ID=Msa1224170-mRNA-1:exon:32305;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88929200 | 88929689 | 88929200 | ID=Msa1224170-mRNA-1:exon:32304;Parent=Msa1224170-mRNA-1 |
| chr8_1 | exon | 88930420 | 88930423 | 88930420 | ID=Msa1224170-mRNA-1:exon:32303;Parent=Msa1224170-mRNA-1 |
| chr8_1 | CDS | 88930420 | 88930423 | 88930420 | ID=Msa1224170-mRNA-1:cds;Parent=Msa1224170-mRNA-1 |
| chr8_1 | CDS | 88929379 | 88929689 | 88929379 | ID=Msa1224170-mRNA-1:cds;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88929200 | 88929378 | 88929200 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88928966 | 88929078 | 88928966 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88928748 | 88928847 | 88928748 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88928497 | 88928629 | 88928497 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88928362 | 88928422 | 88928362 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88927648 | 88928284 | 88927648 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88926877 | 88927206 | 88926877 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88925990 | 88926400 | 88925990 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88925834 | 88925906 | 88925834 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88925670 | 88925755 | 88925670 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88925461 | 88925580 | 88925461 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| chr8_1 | three_prime_UTR | 88924837 | 88925306 | 88924837 | ID=Msa1224170-mRNA-1:three_prime_utr;Parent=Msa1224170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
