AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225920 MtrunA17_Chr7g0246681 97.963 589 12 0 1 589 1 589 0.0 1208
Msa1225920 MtrunA17_Chr8g0350351 78.347 605 112 3 1 589 1 602 0.0 967
Msa1225920 MtrunA17_Chr8g0388881 45.591 533 264 8 73 587 96 620 4.91e-170 497
Msa1225920 MtrunA17_Chr1g0203741 40.843 617 327 10 2 587 8 617 2.45e-168 493
Msa1225920 MtrunA17_Chr4g0055031 46.014 552 259 11 58 587 69 603 2.64e-168 492
Msa1225920 MtrunA17_Chr7g0246701 46.415 530 256 9 78 587 104 625 2.60e-165 485
Msa1225920 MtrunA17_Chr8g0361791 45.203 542 269 8 62 587 71 600 4.85e-165 484
Msa1225920 MtrunA17_Chr8g0350391 44.991 529 266 7 78 587 108 630 9.53e-165 484
Msa1225920 MtrunA17_Chr5g0416991 44.465 542 272 8 62 587 71 599 7.49e-163 478
Msa1225920 MtrunA17_Chr6g0472571 44.045 529 267 9 78 587 108 626 3.28e-161 474
Msa1225920 MtrunA17_Chr8g0369481 43.454 527 270 8 78 587 73 588 1.45e-155 459
Msa1225920 MtrunA17_Chr7g0214551 43.470 536 269 10 75 585 43 569 1.22e-153 453
Msa1225920 MtrunA17_Chr3g0092501 43.691 531 267 8 73 587 83 597 3.75e-151 448
Msa1225920 MtrunA17_Chr5g0409411 43.503 531 274 9 74 588 71 591 2.16e-147 438
Msa1225920 MtrunA17_Chr1g0167381 40.669 568 308 9 42 587 55 615 1.20e-145 434
Msa1225920 MtrunA17_Chr1g0183721 38.648 577 328 9 29 587 17 585 1.51e-143 428
Msa1225920 MtrunA17_Chr3g0130381 41.468 545 283 12 65 588 248 777 3.21e-143 433
Msa1225920 MtrunA17_Chr1g0187601 41.296 540 292 9 66 587 82 614 6.75e-141 422
Msa1225920 MtrunA17_Chr3g0125511 41.431 531 273 14 80 588 229 743 2.90e-139 422
Msa1225920 MtrunA17_Chr8g0384431 42.231 502 255 11 84 563 298 786 2.22e-138 422
Msa1225920 MtrunA17_Chr5g0437501 41.255 526 270 12 83 588 100 606 3.89e-138 415
Msa1225920 MtrunA17_Chr3g0112341 42.155 529 279 11 73 586 151 667 9.70e-137 413
Msa1225920 MtrunA17_Chr3g0113981 40.561 535 288 8 63 588 156 669 9.03e-136 410
Msa1225920 MtrunA17_Chr5g0435751 39.927 551 286 11 50 586 100 619 4.38e-135 407
Msa1225920 MtrunA17_Chr1g0171781 40.189 530 292 9 75 589 86 605 6.02e-135 406
Msa1225920 MtrunA17_Chr8g0372471 41.731 520 275 9 83 588 386 891 2.87e-134 413
Msa1225920 MtrunA17_Chr1g0159741 41.040 519 277 11 83 584 150 656 3.03e-130 396
Msa1225920 MtrunA17_Chr5g0426281 33.092 553 324 12 65 588 136 671 1.82e-97 311
Msa1225920 MtrunA17_Chr3g0115931 32.605 549 326 14 73 588 152 689 1.05e-90 294
Msa1225920 MtrunA17_Chr1g0155141 33.843 523 303 15 81 588 206 700 4.46e-89 290
Msa1225920 MtrunA17_Chr5g0404771 48.879 223 108 3 83 301 328 548 5.16e-72 241
Msa1225920 MtrunA17_Chr4g0043121 29.114 395 251 8 6 377 13 401 4.54e-54 189
Msa1225920 MtrunA17_Chr5g0404761 36.934 287 156 7 313 588 1 273 9.17e-54 184
Msa1225920 MtrunA17_Chr4g0043131 46.405 153 73 3 438 588 39 184 1.73e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225920 AT4G00740.1 72.483 596 156 2 1 589 1 595 0.0 937
Msa1225920 AT4G00740.2 72.483 596 156 2 1 589 1 595 0.0 937
Msa1225920 AT4G00750.1 45.810 537 259 7 74 587 95 622 1.12e-166 489
Msa1225920 AT4G10440.1 44.404 545 274 9 63 587 81 616 4.54e-166 487
Msa1225920 AT1G33170.1 43.088 557 289 8 50 587 87 634 3.52e-164 483
Msa1225920 AT2G45750.1 44.527 539 269 8 74 589 86 617 9.44e-163 479
Msa1225920 AT1G31850.1 41.864 590 306 11 25 587 17 596 6.51e-161 473
Msa1225920 AT1G31850.2 41.864 590 306 11 25 587 17 596 6.51e-161 473
Msa1225920 AT1G31850.4 41.864 590 306 11 25 587 17 596 6.51e-161 473
Msa1225920 AT1G31850.3 41.864 590 306 11 25 587 17 596 6.51e-161 473
Msa1225920 AT1G26850.2 45.047 535 264 10 73 587 84 608 1.79e-159 470
Msa1225920 AT1G26850.1 45.047 535 264 10 73 587 84 608 1.79e-159 470
Msa1225920 AT4G19120.1 43.962 530 273 8 74 587 69 590 1.53e-158 467
Msa1225920 AT4G19120.2 43.962 530 273 8 74 587 69 590 1.53e-158 467
Msa1225920 AT4G18030.1 45.386 531 262 9 74 587 84 603 3.41e-157 464
Msa1225920 AT2G43200.2 43.429 525 273 9 78 586 94 610 7.19e-151 447
Msa1225920 AT2G43200.1 43.429 525 273 9 78 586 94 610 7.19e-151 447
Msa1225920 AT3G23300.2 41.989 543 288 9 65 587 66 601 5.79e-147 437
Msa1225920 AT3G23300.1 41.989 543 288 9 65 587 66 601 5.79e-147 437
Msa1225920 AT4G14360.1 43.676 506 263 7 73 563 74 572 3.27e-145 433
Msa1225920 AT4G14360.2 43.676 506 263 7 73 563 74 572 3.27e-145 433
Msa1225920 AT1G04430.1 37.851 605 331 9 22 587 15 613 2.79e-144 431
Msa1225920 AT1G04430.3 37.851 605 331 9 22 587 15 613 2.79e-144 431
Msa1225920 AT1G04430.2 37.851 605 331 9 22 587 15 613 2.79e-144 431
Msa1225920 AT2G34300.2 43.074 527 260 14 84 588 250 758 4.44e-143 433
Msa1225920 AT2G34300.3 43.074 527 260 14 84 588 250 758 4.44e-143 433
Msa1225920 AT2G34300.1 43.074 527 260 14 84 588 250 758 4.44e-143 433
Msa1225920 AT5G64030.1 42.803 528 261 13 84 588 308 817 5.56e-142 432
Msa1225920 AT1G29470.1 42.125 527 265 12 84 588 250 758 2.53e-140 426
Msa1225920 AT1G29470.2 42.125 527 265 12 84 588 250 758 2.53e-140 426
Msa1225920 AT2G39750.1 40.789 532 282 13 73 586 175 691 5.81e-137 415
Msa1225920 AT5G06050.1 40.530 528 285 11 73 584 147 661 1.14e-136 414
Msa1225920 AT1G77260.1 40.038 532 284 13 73 586 141 655 1.63e-136 412
Msa1225920 AT3G10200.1 41.026 546 289 11 60 589 62 590 5.85e-136 409
Msa1225920 AT3G51070.1 39.894 564 303 12 46 588 342 890 9.71e-134 412
Msa1225920 AT2G40280.1 40.000 560 288 16 46 588 54 582 1.18e-133 403
Msa1225920 AT5G14430.1 41.091 550 300 8 58 589 63 606 3.33e-133 402
Msa1225920 AT5G04060.1 39.338 544 299 9 60 589 73 599 8.41e-132 398
Msa1225920 AT3G56080.1 41.313 518 269 13 84 588 114 609 1.76e-131 398
Msa1225920 AT4G19120.3 44.907 432 221 5 74 489 69 499 2.20e-131 394
Msa1225920 AT5G14430.2 40.727 550 302 8 58 589 63 606 3.81e-131 397
Msa1225920 AT3G10200.2 42.596 493 253 9 60 538 62 538 1.02e-127 388
Msa1225920 AT3G51070.2 40.900 489 263 10 46 513 342 825 5.60e-120 375
Msa1225920 AT1G26850.3 44.928 414 205 8 73 467 84 493 6.98e-119 362
Msa1225920 AT3G56080.2 43.119 436 227 11 84 506 114 541 4.45e-117 358
Msa1225920 AT1G19430.1 35.000 520 302 12 81 588 228 723 1.03e-95 308
Msa1225920 AT1G19430.3 35.000 520 302 12 81 588 228 723 1.03e-95 308
Msa1225920 AT1G78240.1 33.396 533 320 12 73 576 144 670 1.30e-92 299
Msa1225920 AT1G78240.2 33.396 533 320 12 73 576 144 670 1.30e-92 299
Msa1225920 AT1G13860.4 32.370 519 298 11 106 588 101 602 2.77e-87 283
Msa1225920 AT1G13860.3 32.370 519 298 11 106 588 101 602 2.77e-87 283
Msa1225920 AT1G13860.1 32.370 519 298 11 106 588 101 602 2.77e-87 283
Msa1225920 AT1G13860.5 32.370 519 298 11 106 588 101 602 2.77e-87 283
Msa1225920 AT2G03480.2 30.839 548 310 11 73 588 84 594 3.68e-84 275
Msa1225920 AT2G03480.1 31.009 545 324 12 73 588 84 605 3.42e-82 270
Msa1225920 AT1G13860.2 32.538 461 265 9 159 588 1 446 1.66e-77 253
Msa1225920 AT1G19430.2 31.937 382 235 9 81 451 228 595 2.76e-54 194
Msa1225920 AT2G03480.3 28.750 320 211 5 73 377 84 401 4.22e-44 163

Find 202 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAGAACACCTCCATTTA+TGG 0.152108 8_1:-91482679 None:intergenic
AGACTTCCATTTCCTGCTTT+TGG 0.176323 8_1:+91482960 Msa1225920:CDS
GATCTGATTAATAAGCTATT+TGG 0.180942 8_1:-91480309 None:intergenic
CACTGACAACGGTGTTATTT+AGG 0.188484 8_1:+91485275 Msa1225920:three_prime_UTR
CACACCTTATGCATGCTTTC+AGG 0.213467 8_1:-91480744 None:intergenic
GAGAAAGAGTAATGAGAAAA+AGG 0.217310 8_1:-91480424 None:intergenic
TTACTTCAGGTTGCTAGTTT+TGG 0.217337 8_1:+91482813 Msa1225920:intron
ATTGAGGAAGGGATGTTAAA+TGG 0.234055 8_1:+91480540 Msa1225920:CDS
ATCTTTGACAGAGGACTTAT+TGG 0.248824 8_1:+91483855 Msa1225920:CDS
CTTGAATTATGTGATGATTC+TGG 0.250630 8_1:+91483343 Msa1225920:CDS
ATGGACATGAATGCATTATA+TGG 0.268695 8_1:+91483750 Msa1225920:CDS
GTTCGAGGGTATGTTGAAAA+AGG 0.289047 8_1:-91484370 None:intergenic
AGTCAATACATTCCCATAAA+TGG 0.293619 8_1:+91482666 Msa1225920:CDS
TCCTGTTCGGTGGGCTAAAC+AGG 0.305359 8_1:+91483189 Msa1225920:CDS
TTCATATAAAGAAAACATTA+AGG 0.306553 8_1:+91485377 Msa1225920:three_prime_UTR
GTCAGGTTCTTTATCATAAA+TGG 0.310121 8_1:-91485189 None:intergenic
ATTGAAATTGATTTCAAAAT+CGG 0.318288 8_1:-91480283 None:intergenic
AATTCTTATGCTTCATGATC+TGG 0.328562 8_1:-91479987 None:intergenic
GCCTAATGGGTATCGGGTTC+CGG 0.340054 8_1:+91480713 Msa1225920:CDS
CCTGTCAGCAATCTTGTTGT+GGG 0.348589 8_1:-91482541 None:intergenic
TTGACTTGGTTCATTGTTCT+CGG 0.348912 8_1:+91482985 Msa1225920:CDS
GTAGAGAGATGAATTACTAT+AGG 0.350347 8_1:+91480640 Msa1225920:CDS
ATCAAAGATCTTATGCTTCA+AGG 0.353333 8_1:-91480020 None:intergenic
ATTCAACATTACTTATTCAT+TGG 0.356578 8_1:+91485511 Msa1225920:three_prime_UTR
CCTTGGTCGCCGCCGTGTGC+TGG 0.360888 8_1:+91480470 Msa1225920:CDS
CTTCCTAATGGAAATGAGTT+TGG 0.361568 8_1:+91483319 Msa1225920:CDS
TAGAGAGATGAATTACTATA+GGG 0.363989 8_1:+91480641 Msa1225920:CDS
GTTTGATTCCACCGCCTAAT+GGG 0.364461 8_1:+91480700 Msa1225920:CDS
GGAGAGACATTGTCCTTTGC+CGG 0.366173 8_1:+91480662 Msa1225920:CDS
ATGTAATATTGTTGATTTGA+TGG 0.368215 8_1:+91485058 Msa1225920:CDS
ACACCACCACTGAACAATAA+AGG 0.370225 8_1:-91485306 None:intergenic
TCCATAACGTTGCGTATTGA+TGG 0.372172 8_1:-91483732 None:intergenic
TGTTTGATTCCACCGCCTAA+TGG 0.375674 8_1:+91480699 Msa1225920:CDS
GCTACTTTGTCAATTACTTC+GGG 0.378208 8_1:-91485134 None:intergenic
ATATGATCCACCTCACTTGC+AGG 0.378217 8_1:-91480582 None:intergenic
ATCTGATTAATAAGCTATTT+GGG 0.380180 8_1:-91480308 None:intergenic
ATATATTGTTCTGCTCCATC+TGG 0.387453 8_1:-91482633 None:intergenic
CGCTACTTTGTCAATTACTT+CGG 0.388361 8_1:-91485135 None:intergenic
AGACCAAACTCATTTCCATT+AGG 0.395331 8_1:-91483322 None:intergenic
ATCAAAGGAGATTATGCTAT+TGG 0.396451 8_1:+91483558 Msa1225920:CDS
TCCTGTCAGCAATCTTGTTG+TGG 0.396608 8_1:-91482542 None:intergenic
TTGAATTATGTGATGATTCT+GGG 0.400181 8_1:+91483344 Msa1225920:CDS
TCCTGTTTAGCCCACCGAAC+AGG 0.405950 8_1:-91483190 None:intergenic
AATTCACTAAATATAAAGTT+GGG 0.410505 8_1:+91483705 Msa1225920:CDS
TCCATCAATACGCAACGTTA+TGG 0.412610 8_1:+91483731 Msa1225920:CDS
TCAAATCCAAAAGCAGGAAA+TGG 0.413279 8_1:-91482966 None:intergenic
TACATGAAAACACTGCAATC+TGG 0.414035 8_1:+91483272 Msa1225920:CDS
CTCAGAACACCTCCATTTAT+GGG 0.417404 8_1:-91482678 None:intergenic
GCAGATTCGTGTCTTCCTAA+TGG 0.418281 8_1:+91483307 Msa1225920:CDS
CCGTCTTGTGGTGGCTATTG+AGG 0.420421 8_1:+91480524 Msa1225920:CDS
TTGAGGAAGGGATGTTAAAT+GGG 0.428861 8_1:+91480541 Msa1225920:CDS
CACCACCACTGAACAATAAA+GGG 0.429403 8_1:-91485305 None:intergenic
TGCAACTTATTTCATTGAAG+TGG 0.430659 8_1:+91483123 Msa1225920:CDS
ATAAAGAAAACATTAAGGTT+AGG 0.431045 8_1:+91485382 Msa1225920:three_prime_UTR
GGTGCGGCAGTTAGCCTCTC+TGG 0.433582 8_1:-91483597 None:intergenic
TGCTGACAGGAAAGGTCACC+AGG 0.435156 8_1:+91482554 Msa1225920:CDS
TTTGATTAAGGGATTGAAAA+GGG 0.439019 8_1:-91480258 None:intergenic
CGAAGTGTTGTTGTCGGTGG+TGG 0.443615 8_1:-91480112 None:intergenic
TTCCACCGCCTAATGGGTAT+CGG 0.445816 8_1:+91480706 Msa1225920:CDS
AAATTTACCAAGCTTGACTT+AGG 0.450311 8_1:-91483369 None:intergenic
TGGACATGAATGCATTATAT+GGG 0.450687 8_1:+91483751 Msa1225920:CDS
TTGTTACGAAGTGTTGTTGT+CGG 0.451273 8_1:-91480118 None:intergenic
TGCGATTTATGTGAATCTCT+TGG 0.452077 8_1:-91482879 None:intergenic
ATCGCAGATACAATTTGCCT+TGG 0.452382 8_1:+91482896 Msa1225920:CDS
AATAGACAGTGAAATATAAC+CGG 0.452686 8_1:-91485550 None:intergenic
AGTTAGCCTCTCTGGCCACT+TGG 0.453186 8_1:-91483589 None:intergenic
TGGATATAGAATGTAGTGTT+AGG 0.454081 8_1:-91480215 None:intergenic
CGTGTGTTGGTGCGTTTCCA+TGG 0.459289 8_1:-91480369 None:intergenic
TGCCTTGGAAAGAGGAATAC+CGG 0.462056 8_1:+91482911 Msa1225920:CDS
GAATTCACTAAATATAAAGT+TGG 0.462143 8_1:+91483704 Msa1225920:CDS
AACTTACTGTAGGCTGTAAA+CGG 0.470172 8_1:-91483017 None:intergenic
CCAGCACACGGCGGCGACCA+AGG 0.472017 8_1:-91480470 None:intergenic
TTAGAGCTTCCATAAGGTCT+TGG 0.472115 8_1:-91485243 None:intergenic
GGCTAACTGCCGCACCTTCG+AGG 0.477419 8_1:+91483604 Msa1225920:CDS
TCATCTCCGGTCCTCCTGTT+CGG 0.477553 8_1:+91483176 Msa1225920:CDS
ACTGCACTTGACATGGGATG+TGG 0.486235 8_1:+91482702 Msa1225920:CDS
TTATTGGTGTCTATCATGAT+TGG 0.487456 8_1:+91483871 Msa1225920:CDS
CTCCGGTCCTCCTGTTCGGT+GGG 0.487962 8_1:+91483180 Msa1225920:CDS
AGGTCCCCTCTCCTGAAAAC+CGG 0.489154 8_1:+91483624 Msa1225920:CDS
AAAAGAATGGTCAGATCTCC+AGG 0.491502 8_1:+91483213 Msa1225920:CDS
TCTCCGGTCCTCCTGTTCGG+TGG 0.493729 8_1:+91483179 Msa1225920:CDS
AAACAAACCGCAGTCTCCTC+CGG 0.498274 8_1:-91480681 None:intergenic
ATACAATTTGCCTTGGAAAG+AGG 0.505244 8_1:+91482903 Msa1225920:CDS
ACAAGGCCTTTGCCACAGCC+TGG 0.506176 8_1:-91483231 None:intergenic
CTTATAAAAGATCCAGCTAC+TGG 0.507119 8_1:+91484427 Msa1225920:CDS
TGGAAACATCGTACCACCAC+CGG 0.508503 8_1:-91482613 None:intergenic
TCCACCGCCTAATGGGTATC+GGG 0.510810 8_1:+91480707 Msa1225920:CDS
CTTCTCGTTTCATCCACCCC+TGG 0.511990 8_1:-91482572 None:intergenic
CTTGTGGTGGCTATTGAGGA+AGG 0.519378 8_1:+91480528 Msa1225920:CDS
ACAAGACGGTTGCGCTGTTG+TGG 0.521805 8_1:-91480510 None:intergenic
CTGTCAGCAATCTTGTTGTG+GGG 0.522422 8_1:-91482540 None:intergenic
GTTAGCCTCTCTGGCCACTT+GGG 0.524844 8_1:-91483588 None:intergenic
ACCAAGTCAAATCCAAAAGC+AGG 0.525653 8_1:-91482972 None:intergenic
AACGCACCAACACACGTCAA+TGG 0.527589 8_1:+91480376 Msa1225920:CDS
AGATCTCCAGGCTGTGGCAA+AGG 0.528686 8_1:+91483225 Msa1225920:CDS
GGTATCGGGTTCCGGTGAGG+TGG 0.533757 8_1:+91480721 Msa1225920:CDS
CACTAAGCTGTGGGTACGGA+GGG 0.534730 8_1:+91483668 Msa1225920:CDS
CAGCACACGGCGGCGACCAA+GGG 0.536436 8_1:-91480469 None:intergenic
GCGGCCGGAGGGAACTGTTG+TGG 0.538147 8_1:+91485100 Msa1225920:CDS
CACTTTATATTCCCCGGTGG+TGG 0.538896 8_1:+91482600 Msa1225920:CDS
GTTAAATGGGAAGAGTATTG+AGG 0.539727 8_1:+91480554 Msa1225920:CDS
GGAAGACACGAATCTGCTGC+TGG 0.540770 8_1:-91483301 None:intergenic
TCTGAGGACTGCACTTGACA+TGG 0.541511 8_1:+91482695 Msa1225920:CDS
CCAAGCATAGCAACAAAAGC+CGG 0.542023 8_1:-91482930 None:intergenic
ACCGCAGTCTCCTCCGGCAA+AGG 0.543088 8_1:-91480675 None:intergenic
AACCGGTGTTGATGTATATG+AGG 0.547717 8_1:+91483641 Msa1225920:CDS
CTGGGGACCTAAGTCAAGCT+TGG 0.550202 8_1:+91483362 Msa1225920:CDS
AAATTCCCTTTATTGTTCAG+TGG 0.552777 8_1:+91485300 Msa1225920:three_prime_UTR
TAATATTGTTGATTTGATGG+TGG 0.554493 8_1:+91485061 Msa1225920:CDS
AGCCGGTATTCCTCTTTCCA+AGG 0.555587 8_1:-91482913 None:intergenic
TTCCCTTTATTGTTCAGTGG+TGG 0.555845 8_1:+91485303 Msa1225920:three_prime_UTR
TGTTGGTGCGTTTCCATGGT+GGG 0.555874 8_1:-91480365 None:intergenic
CTTGATGCGATCTTTGACAG+AGG 0.556268 8_1:+91483846 Msa1225920:CDS
GGTGGATATCTAGTCATCTC+CGG 0.556504 8_1:+91483163 Msa1225920:CDS
TCCTTTGCCGGAGGAGACTG+CGG 0.558889 8_1:+91480674 Msa1225920:CDS
ACAGGAAAGGTCACCAGGGG+TGG 0.559143 8_1:+91482559 Msa1225920:CDS
CTGCACTTGACATGGGATGT+GGG 0.561100 8_1:+91482703 Msa1225920:CDS
GGTCAACACTTTATATTCCC+CGG 0.564775 8_1:+91482594 Msa1225920:CDS
AGCCCACCGAACAGGAGGAC+CGG 0.567603 8_1:-91483182 None:intergenic
GGTTCTTTATCATAAATGGT+CGG 0.570849 8_1:-91485185 None:intergenic
CTCAACTGACTATTCCTCCT+CGG 0.571473 8_1:-91480618 None:intergenic
ATGCTTTCAGGCCACCTCAC+CGG 0.571571 8_1:-91480732 None:intergenic
TGAGAGTTAGAGCTTCCATA+AGG 0.571739 8_1:-91485249 None:intergenic
GTGATTCAATGCTGGCCACA+TGG 0.572073 8_1:-91484405 None:intergenic
GGACATGAATGCATTATATG+GGG 0.573009 8_1:+91483752 Msa1225920:CDS
GTGGATAGATTACTTCGCCC+TGG 0.574350 8_1:+91483142 Msa1225920:CDS
CTAAATAACACCGTTGTCAG+TGG 0.574408 8_1:-91485274 None:intergenic
ACCGGAACCCGATACCCATT+AGG 0.575177 8_1:-91480714 None:intergenic
GGAAACATCGTACCACCACC+GGG 0.575600 8_1:-91482612 None:intergenic
ACCCGATACCCATTAGGCGG+TGG 0.581597 8_1:-91480708 None:intergenic
CCTTAAAATCTGATCCTGTG+TGG 0.585740 8_1:+91483787 Msa1225920:CDS
ATGGTCAGATCTCCAGGCTG+TGG 0.585744 8_1:+91483219 Msa1225920:CDS
GAGAGGGGACCTCGAAGGTG+CGG 0.587301 8_1:-91483613 None:intergenic
TCAAAGATCGCATCAAGAGT+TGG 0.587538 8_1:-91483840 None:intergenic
TGTTGTGGATCAACGGTGGA+CGG 0.588409 8_1:-91480495 None:intergenic
TGCACTTGACATGGGATGTG+GGG 0.590574 8_1:+91482704 Msa1225920:CDS
GGCTTGTCCTGCAAGTGAGG+TGG 0.591375 8_1:+91480575 Msa1225920:CDS
GTGGCCTGAAAGCATGCATA+AGG 0.591970 8_1:+91480740 Msa1225920:CDS
CGGTGGACGGAGCCAGCACA+CGG 0.592440 8_1:-91480482 None:intergenic
CTGACACTAAGCTGTGGGTA+CGG 0.592971 8_1:+91483664 Msa1225920:CDS
AGTAGTACGTCGTCTATCAA+AGG 0.594144 8_1:+91483543 Msa1225920:CDS
CTTAAAATCTGATCCTGTGT+GGG 0.595912 8_1:+91483788 Msa1225920:CDS
CACACGGCGGCGACCAAGGG+TGG 0.596889 8_1:-91480466 None:intergenic
TTCCTCCTCGGATCCTCACA+CGG 0.597488 8_1:-91480606 None:intergenic
ACAACAGCGCAACCGTCTTG+TGG 0.602780 8_1:+91480512 Msa1225920:CDS
GAATTTCTCATGCGGTGAGG+TGG 0.604415 8_1:+91485159 Msa1225920:CDS
ATGGGTATCGGGTTCCGGTG+AGG 0.605394 8_1:+91480718 Msa1225920:CDS
AACTCTCATTCCACTGACAA+CGG 0.607058 8_1:+91485264 Msa1225920:exon
CTGAGGACTGCACTTGACAT+GGG 0.607454 8_1:+91482696 Msa1225920:CDS
CCATAAATGGAGGTGTTCTG+AGG 0.608336 8_1:+91482679 Msa1225920:CDS
GTTGCGCTGTTGTGGATCAA+CGG 0.608776 8_1:-91480502 None:intergenic
TTACGAAGTGTTGTTGTCGG+TGG 0.610473 8_1:-91480115 None:intergenic
TTCAGGAGAGGGGACCTCGA+AGG 0.611046 8_1:-91483618 None:intergenic
ATATGCCGTGTGAGGATCCG+AGG 0.611947 8_1:+91480601 Msa1225920:CDS
AACAAGATTGCTGACAGGAA+AGG 0.612391 8_1:+91482546 Msa1225920:CDS
TGAGGCTTGTCCTGCAAGTG+AGG 0.612584 8_1:+91480572 Msa1225920:CDS
CGCGAATTTCTCATGCGGTG+AGG 0.618831 8_1:+91485156 Msa1225920:CDS
CCCACAACAAGATTGCTGAC+AGG 0.621138 8_1:+91482541 Msa1225920:CDS
TTGTTTGTAAGATTCTGTGA+TGG 0.622606 8_1:-91480235 None:intergenic
GGTGGTACGATGTTTCCAGA+TGG 0.623372 8_1:+91482618 Msa1225920:CDS
GGATCAGATCATAAGTTCGA+GGG 0.623475 8_1:-91484384 None:intergenic
TGGATCAGATCATAAGTTCG+AGG 0.626818 8_1:-91484385 None:intergenic
GAGACATTGTCCTTTGCCGG+AGG 0.627674 8_1:+91480665 Msa1225920:CDS
GACATGAATGCATTATATGG+GGG 0.628349 8_1:+91483753 Msa1225920:CDS
ATGAGGCTGACACTAAGCTG+TGG 0.628841 8_1:+91483658 Msa1225920:CDS
TGAATTATGTGATGATTCTG+GGG 0.629160 8_1:+91483345 Msa1225920:CDS
GAGATGACTAGATATCCACC+AGG 0.630917 8_1:-91483160 None:intergenic
ATCTCTTGGAGCAAAAGACA+TGG 0.632314 8_1:-91482865 None:intergenic
CAATTCCCAAGTGGCCAGAG+AGG 0.633346 8_1:+91483583 Msa1225920:CDS
ATTCACTAAATATAAAGTTG+GGG 0.633734 8_1:+91483706 Msa1225920:CDS
GTGTTGGTGCGTTTCCATGG+TGG 0.634028 8_1:-91480366 None:intergenic
TGTTTAGCCCACCGAACAGG+AGG 0.634614 8_1:-91483187 None:intergenic
AAGATCGCATCAAGAGTTGG+TGG 0.642391 8_1:-91483837 None:intergenic
ACACTAAGCTGTGGGTACGG+AGG 0.649184 8_1:+91483667 Msa1225920:CDS
GATAAAGAACCTGACTCACA+CGG 0.649646 8_1:+91485197 Msa1225920:CDS
CAGGGGTGGATGAAACGAGA+AGG 0.650186 8_1:+91482573 Msa1225920:CDS
TGAGGCTGACACTAAGCTGT+GGG 0.651463 8_1:+91483659 Msa1225920:CDS
ACTACATTCATCACCCACAC+AGG 0.651770 8_1:-91483801 None:intergenic
CAATACATTCCCATAAATGG+AGG 0.655075 8_1:+91482669 Msa1225920:CDS
GAGACGCCATTGACGTGTGT+TGG 0.655246 8_1:-91480382 None:intergenic
CTTACCACAACAGTTCCCTC+CGG 0.657553 8_1:-91485104 None:intergenic
ACAGCGCAACCGTCTTGTGG+TGG 0.669047 8_1:+91480515 Msa1225920:CDS
GATAGATTACTTCGCCCTGG+TGG 0.672552 8_1:+91483145 Msa1225920:CDS
CCTCAATAGCCACCACAAGA+CGG 0.672916 8_1:-91480524 None:intergenic
AGTTATCTGTTCATAACACA+AGG 0.678842 8_1:-91483248 None:intergenic
GGATGTGAGAATAATGTGAG+AGG 0.679136 8_1:-91480078 None:intergenic
TTGTGGTGGCTATTGAGGAA+GGG 0.680797 8_1:+91480529 Msa1225920:CDS
AACTTATGATCTGATCCATG+TGG 0.684133 8_1:+91484390 Msa1225920:CDS
GTCACTCAAATTTCCCACCA+TGG 0.691297 8_1:+91480352 Msa1225920:CDS
GGTGGATCATATGCCGTGTG+AGG 0.693101 8_1:+91480593 Msa1225920:CDS
TGCCGTGTGAGGATCCGAGG+AGG 0.694563 8_1:+91480604 Msa1225920:CDS
AGCCTCATATACATCAACAC+CGG 0.699420 8_1:-91483643 None:intergenic
GCTGACAGGAAAGGTCACCA+GGG 0.706997 8_1:+91482555 Msa1225920:CDS
CTGACAGGAAAGGTCACCAG+GGG 0.710989 8_1:+91482556 Msa1225920:CDS
GGAACCCGATACCCATTAGG+CGG 0.712447 8_1:-91480711 None:intergenic
GCGCTGTTGTGGATCAACGG+TGG 0.717072 8_1:-91480499 None:intergenic
CAACACTTTATATTCCCCGG+TGG 0.727815 8_1:+91482597 Msa1225920:CDS
CTATTGGAACAATTCCCAAG+TGG 0.728324 8_1:+91483574 Msa1225920:CDS
AGTAGCGCGAATTTCTCATG+CGG 0.745124 8_1:+91485151 Msa1225920:CDS
AGATGACTAGATATCCACCA+GGG 0.765962 8_1:-91483159 None:intergenic
GAAACATCGTACCACCACCG+GGG 0.777476 8_1:-91482611 None:intergenic
TGGACGGAGCCAGCACACGG+CGG 0.777606 8_1:-91480479 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGATATTAAATTGATAA+TGG + chr8_1:91481552-91481571 Msa1225920:intron 10.0%
!!! CTTTTCTTTTTTTTTTTTTT+TGG + chr8_1:91484116-91484135 Msa1225920:intron 10.0%
!!! TGTATTTTTAATTTTTAATC+TGG + chr8_1:91484219-91484238 Msa1225920:intron 10.0%
!! CTTTATAAATGTAAAAAATA+TGG + chr8_1:91484815-91484834 Msa1225920:intron 10.0%
!!! ATTGAAATTGATTTCAAAAT+CGG - chr8_1:91480286-91480305 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG + chr8_1:91482179-91482198 Msa1225920:intron 15.0%
!! CAAATTAGTAGTATTAATTA+GGG + chr8_1:91482180-91482199 Msa1225920:intron 15.0%
!! AAATTAGTAGTATTAATTAG+GGG + chr8_1:91482181-91482200 Msa1225920:intron 15.0%
!! AATTCACTAAATATAAAGTT+GGG + chr8_1:91483705-91483724 Msa1225920:CDS 15.0%
!!! TGATTTTAAAATAAGATATG+TGG + chr8_1:91484021-91484040 Msa1225920:intron 15.0%
!! TTCATATAAAGAAAACATTA+AGG + chr8_1:91485377-91485396 Msa1225920:three_prime_UTR 15.0%
!! ATCTGATTAATAAGCTATTT+GGG - chr8_1:91480311-91480330 None:intergenic 20.0%
!! AACAGTATTTAAAGATGATA+TGG - chr8_1:91481026-91481045 None:intergenic 20.0%
!!! AAATACTGTTTATTTGAGAT+CGG + chr8_1:91481036-91481055 Msa1225920:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG + chr8_1:91481332-91481351 Msa1225920:intron 20.0%
!! AAATTTAAAAACTGTTGTGT+AGG + chr8_1:91481477-91481496 Msa1225920:intron 20.0%
!! AATTTAAAAACTGTTGTGTA+GGG + chr8_1:91481478-91481497 Msa1225920:intron 20.0%
!!! AATGAAAATTTTAATCTCCA+TGG - chr8_1:91481535-91481554 None:intergenic 20.0%
!! GAAAATACCTCTAAATTTAA+AGG - chr8_1:91481708-91481727 None:intergenic 20.0%
!!! TGGATTTTTTTTGTTTAGAA+TGG + chr8_1:91481965-91481984 Msa1225920:intron 20.0%
!!! GGATTTTTTTTGTTTAGAAT+GGG + chr8_1:91481966-91481985 Msa1225920:intron 20.0%
!! TTTATTACACATACAAACAA+AGG - chr8_1:91482138-91482157 None:intergenic 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + chr8_1:91482263-91482282 Msa1225920:intron 20.0%
!! ATAAGGTTTAAAAAGTAAAG+AGG - chr8_1:91482743-91482762 None:intergenic 20.0%
!! GAATTCACTAAATATAAAGT+TGG + chr8_1:91483704-91483723 Msa1225920:CDS 20.0%
!! ATTCACTAAATATAAAGTTG+GGG + chr8_1:91483706-91483725 Msa1225920:CDS 20.0%
!!! ATTATTTTCCAGAAACATTA+GGG + chr8_1:91483934-91483953 Msa1225920:intron 20.0%
!!! TTTTAAAATAAGATATGTGG+TGG + chr8_1:91484024-91484043 Msa1225920:intron 20.0%
!!! TTTAATTTTTAATCTGGATG+CGG + chr8_1:91484225-91484244 Msa1225920:intron 20.0%
!!! TTAGTAGAGTTTTTCAATTT+AGG - chr8_1:91484595-91484614 None:intergenic 20.0%
!! TGAAATTCTACAATATTTCT+TGG + chr8_1:91484688-91484707 Msa1225920:intron 20.0%
!!! ATGTAATATTGTTGATTTGA+TGG + chr8_1:91485058-91485077 Msa1225920:CDS 20.0%
!! ATAAAGAAAACATTAAGGTT+AGG + chr8_1:91485382-91485401 Msa1225920:three_prime_UTR 20.0%
!!! TATATTTTTTCGAAGTTTCA+TGG + chr8_1:91485464-91485483 Msa1225920:three_prime_UTR 20.0%
!! ATTCAACATTACTTATTCAT+TGG + chr8_1:91485511-91485530 Msa1225920:three_prime_UTR 20.0%
! TAGGAAAAAAAATGTGTAAC+TGG - chr8_1:91480199-91480218 None:intergenic 25.0%
! TTTGATTAAGGGATTGAAAA+GGG - chr8_1:91480261-91480280 None:intergenic 25.0%
!!! TTTTGATTAAGGGATTGAAA+AGG - chr8_1:91480262-91480281 None:intergenic 25.0%
!!! CAAAATCGGTTTTTGATTAA+GGG - chr8_1:91480272-91480291 None:intergenic 25.0%
!!! TCAAAATCGGTTTTTGATTA+AGG - chr8_1:91480273-91480292 None:intergenic 25.0%
! GATCTGATTAATAAGCTATT+TGG - chr8_1:91480312-91480331 None:intergenic 25.0%
! TAGAGAGATGAATTACTATA+GGG + chr8_1:91480641-91480660 Msa1225920:CDS 25.0%
! TAGAAATTACAACATTAGAG+AGG + chr8_1:91481159-91481178 Msa1225920:intron 25.0%
! AGAAATTACAACATTAGAGA+GGG + chr8_1:91481160-91481179 Msa1225920:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr8_1:91481328-91481347 None:intergenic 25.0%
! AGATTTAGAGATTAATGAGT+TGG + chr8_1:91481357-91481376 Msa1225920:intron 25.0%
! ATTTAAAAACTGTTGTGTAG+GGG + chr8_1:91481479-91481498 Msa1225920:intron 25.0%
! TAACCAATTATAAAATGCCA+TGG + chr8_1:91481515-91481534 Msa1225920:intron 25.0%
! AATACCATTCTCAAAACATA+AGG + chr8_1:91481599-91481618 Msa1225920:intron 25.0%
! ACAAGTACCTTTAAATTTAG+AGG + chr8_1:91481698-91481717 Msa1225920:intron 25.0%
!!! TAAATTTAGAGGTATTTTCC+AGG + chr8_1:91481709-91481728 Msa1225920:intron 25.0%
!! TTGTCTTATTGTTGCTATTA+TGG + chr8_1:91481872-91481891 Msa1225920:intron 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG - chr8_1:91482055-91482074 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG - chr8_1:91482056-91482075 None:intergenic 25.0%
! CATTTCTTAAGAAAAGTTGT+CGG + chr8_1:91482068-91482087 Msa1225920:intron 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr8_1:91482191-91482210 Msa1225920:intron 25.0%
!!! ATGCATCTAGTATTTTGAAA+AGG + chr8_1:91482227-91482246 Msa1225920:intron 25.0%
! TTGAAAAGGAGTTTACATTT+AGG + chr8_1:91482241-91482260 Msa1225920:intron 25.0%
! TGAAAAGGAGTTTACATTTA+GGG + chr8_1:91482242-91482261 Msa1225920:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG + chr8_1:91482262-91482281 Msa1225920:intron 25.0%
! CTACAAATTGAATCCTAATT+TGG - chr8_1:91482358-91482377 None:intergenic 25.0%
! GTGCAATGAAATTAATATAG+AGG + chr8_1:91482377-91482396 Msa1225920:intron 25.0%
! GAAATTAATATAGAGGTGAT+AGG + chr8_1:91482384-91482403 Msa1225920:intron 25.0%
!! TAATATGTTTTGTGCAGATA+TGG + chr8_1:91482505-91482524 Msa1225920:intron 25.0%
! TGAAGTAAAATGGAGTAAAA+TGG - chr8_1:91482801-91482820 None:intergenic 25.0%
!! ATTTTACTCCATTTTACTTC+AGG + chr8_1:91482800-91482819 Msa1225920:intron 25.0%
!! CATAGTAAATTTTCTGCATA+AGG - chr8_1:91483099-91483118 None:intergenic 25.0%
! TTGAATTATGTGATGATTCT+GGG + chr8_1:91483344-91483363 Msa1225920:CDS 25.0%
!! GATTATTTTCCAGAAACATT+AGG + chr8_1:91483933-91483952 Msa1225920:intron 25.0%
! TTTGCCAAGTATTAAGATAT+AGG - chr8_1:91483974-91483993 None:intergenic 25.0%
!!! ATTTTAAAATCATGTCTGCA+AGG - chr8_1:91484013-91484032 None:intergenic 25.0%
! ATATATATCATGTGAATGTG+TGG + chr8_1:91484151-91484170 Msa1225920:intron 25.0%
! TATATCCATTTGTATCGTAA+TGG + chr8_1:91484296-91484315 Msa1225920:intron 25.0%
!! TTTTATAAGTGATTCAATGC+TGG - chr8_1:91484416-91484435 None:intergenic 25.0%
! AAACATCAATGATTAAAGCA+AGG - chr8_1:91485000-91485019 None:intergenic 25.0%
! AATGAAATTGTGAAGAAATC+AGG - chr8_1:91485034-91485053 None:intergenic 25.0%
!!! TAATATTGTTGATTTGATGG+TGG + chr8_1:91485061-91485080 Msa1225920:CDS 25.0%
AATTCTTATGCTTCATGATC+TGG - chr8_1:91479990-91480009 None:intergenic 30.0%
ATCAAAGATCTTATGCTTCA+AGG - chr8_1:91480023-91480042 None:intergenic 30.0%
TGGATATAGAATGTAGTGTT+AGG - chr8_1:91480218-91480237 None:intergenic 30.0%
TTGTTTGTAAGATTCTGTGA+TGG - chr8_1:91480238-91480257 None:intergenic 30.0%
GAGAAAGAGTAATGAGAAAA+AGG - chr8_1:91480427-91480446 None:intergenic 30.0%
GTAGAGAGATGAATTACTAT+AGG + chr8_1:91480640-91480659 Msa1225920:CDS 30.0%
! TTACCTGCATCAATTGTTTT+TGG + chr8_1:91480961-91480980 Msa1225920:intron 30.0%
TTACCAAAAACAATTGATGC+AGG - chr8_1:91480967-91480986 None:intergenic 30.0%
AAAATAGACTTAGGTGGTTT+GGG + chr8_1:91481218-91481237 Msa1225920:intron 30.0%
! TCTCCATGGCATTTTATAAT+TGG - chr8_1:91481521-91481540 None:intergenic 30.0%
!!! GTATCCTTATGTTTTGAGAA+TGG - chr8_1:91481606-91481625 None:intergenic 30.0%
ATAAGATTGATCTTCAATCC+TGG - chr8_1:91481730-91481749 None:intergenic 30.0%
TATGTTGCAGACTTCATATA+TGG + chr8_1:91481833-91481852 Msa1225920:intron 30.0%
! TATTGTTGCTATTATGGTTG+TGG + chr8_1:91481878-91481897 Msa1225920:intron 30.0%
!! TATGTTTGGGTTGTATTTAC+TGG + chr8_1:91481998-91482017 Msa1225920:intron 30.0%
AAATGTGAAAAAAGCAAAGG+GGG - chr8_1:91482053-91482072 None:intergenic 30.0%
GAAATGTGAAAAAAGCAAAG+GGG - chr8_1:91482054-91482073 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr8_1:91482129-91482148 None:intergenic 30.0%
TCAAATGGGTGTTTAGATAT+AGG + chr8_1:91482277-91482296 Msa1225920:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG + chr8_1:91482278-91482297 Msa1225920:intron 30.0%
AGTCAATACATTCCCATAAA+TGG + chr8_1:91482666-91482685 Msa1225920:CDS 30.0%
CAGTGATCAATTCTAGTATA+AGG - chr8_1:91482760-91482779 None:intergenic 30.0%
TGCAACTTATTTCATTGAAG+TGG + chr8_1:91483123-91483142 Msa1225920:CDS 30.0%
AGTTATCTGTTCATAACACA+AGG - chr8_1:91483251-91483270 None:intergenic 30.0%
CTTGAATTATGTGATGATTC+TGG + chr8_1:91483343-91483362 Msa1225920:CDS 30.0%
TGAATTATGTGATGATTCTG+GGG + chr8_1:91483345-91483364 Msa1225920:CDS 30.0%
AAATTTACCAAGCTTGACTT+AGG - chr8_1:91483372-91483391 None:intergenic 30.0%
AGAGATGCAAAGATAATCAA+AGG - chr8_1:91483395-91483414 None:intergenic 30.0%
! AACTAAGATGATCATTTTGC+AGG + chr8_1:91483496-91483515 Msa1225920:intron 30.0%
ATCAAAGGAGATTATGCTAT+TGG + chr8_1:91483558-91483577 Msa1225920:CDS 30.0%
ATGGACATGAATGCATTATA+TGG + chr8_1:91483750-91483769 Msa1225920:CDS 30.0%
TGGACATGAATGCATTATAT+GGG + chr8_1:91483751-91483770 Msa1225920:CDS 30.0%
! TTATTGGTGTCTATCATGAT+TGG + chr8_1:91483871-91483890 Msa1225920:CDS 30.0%
TTCATGCATCTTCTCTTAAA+GGG + chr8_1:91483911-91483930 Msa1225920:intron 30.0%
ATGGCCTATATCTTAATACT+TGG + chr8_1:91483967-91483986 Msa1225920:intron 30.0%
! AGTTGCTTTCATGATACTTA+CGG + chr8_1:91484083-91484102 Msa1225920:intron 30.0%
TACATCCATTACGATACAAA+TGG - chr8_1:91484304-91484323 None:intergenic 30.0%
!!! TCGTAATGGATGTATTTTCT+TGG + chr8_1:91484310-91484329 Msa1225920:intron 30.0%
AATCGATAGAATAACAGCTT+AGG - chr8_1:91484509-91484528 None:intergenic 30.0%
CAAATTGTCGAGATCTATAA+AGG - chr8_1:91484564-91484583 None:intergenic 30.0%
!! TATGGTTTACTTTTGCTATG+AGG + chr8_1:91484833-91484852 Msa1225920:intron 30.0%
TTTGACATGAATCTAATAGG+AGG - chr8_1:91484927-91484946 None:intergenic 30.0%
! TGGAAATTGATCGAATTTTG+CGG + chr8_1:91485081-91485100 Msa1225920:CDS 30.0%
GGTTCTTTATCATAAATGGT+CGG - chr8_1:91485188-91485207 None:intergenic 30.0%
GTCAGGTTCTTTATCATAAA+TGG - chr8_1:91485192-91485211 None:intergenic 30.0%
AAATTCCCTTTATTGTTCAG+TGG + chr8_1:91485300-91485319 Msa1225920:three_prime_UTR 30.0%
! TGCACAAGTATTCCAATTTT+TGG - chr8_1:91485412-91485431 None:intergenic 30.0%
!! AATACTTGTGCAGTTTTATG+TGG + chr8_1:91485420-91485439 Msa1225920:three_prime_UTR 30.0%
!! TTGTTACGAAGTGTTGTTGT+CGG - chr8_1:91480121-91480140 None:intergenic 35.0%
! AATTTGAGTGACGCATTTTG+AGG - chr8_1:91480344-91480363 None:intergenic 35.0%
AGAAAAAGGCAATGGAAATG+AGG - chr8_1:91480413-91480432 None:intergenic 35.0%
GAGTAATGAGAAAAAGGCAA+TGG - chr8_1:91480421-91480440 None:intergenic 35.0%
ATTGAGGAAGGGATGTTAAA+TGG + chr8_1:91480540-91480559 Msa1225920:CDS 35.0%
TTGAGGAAGGGATGTTAAAT+GGG + chr8_1:91480541-91480560 Msa1225920:CDS 35.0%
!! GTTAAATGGGAAGAGTATTG+AGG + chr8_1:91480554-91480573 Msa1225920:CDS 35.0%
!!! TAAGGTGTGGTGTAGTTTTT+TGG + chr8_1:91480758-91480777 Msa1225920:intron 35.0%
!!! GGTGTAGTTTTTTGGAAAGT+TGG + chr8_1:91480766-91480785 Msa1225920:intron 35.0%
! CATGTACTTAAAAGCGTGTT+TGG + chr8_1:91480855-91480874 Msa1225920:intron 35.0%
!! CGTGTGGTTTTTCAAATCAA+GGG - chr8_1:91480940-91480959 None:intergenic 35.0%
!! ACGTGTGGTTTTTCAAATCA+AGG - chr8_1:91480941-91480960 None:intergenic 35.0%
!! TCAATAAAGTGTTGCAGTAG+CGG + chr8_1:91481069-91481088 Msa1225920:intron 35.0%
GATGTATGGTAAGACCATTT+GGG + chr8_1:91481129-91481148 Msa1225920:intron 35.0%
ATTTCTAATTCCCTCCCAAA+TGG - chr8_1:91481146-91481165 None:intergenic 35.0%
!! AGATGGTGGAAAATAGACTT+AGG + chr8_1:91481209-91481228 Msa1225920:intron 35.0%
GAAAATAGACTTAGGTGGTT+TGG + chr8_1:91481217-91481236 Msa1225920:intron 35.0%
! TAATGAGTTGGATGCAAATG+TGG + chr8_1:91481369-91481388 Msa1225920:intron 35.0%
TGGTAGACATGATGCATTAT+TGG + chr8_1:91481792-91481811 Msa1225920:intron 35.0%
! GGAGTTATTGTGTTTTGTGA+AGG + chr8_1:91481923-91481942 Msa1225920:intron 35.0%
! TTGTGTTTTGTGAAGGACTT+AGG + chr8_1:91481930-91481949 Msa1225920:intron 35.0%
AATGTGAAAAAAGCAAAGGG+GGG - chr8_1:91482052-91482071 None:intergenic 35.0%
AGTGTGATGAAATTGAGATG+AGG + chr8_1:91482319-91482338 Msa1225920:intron 35.0%
TGAGAATGTGAAGCCAAATT+AGG + chr8_1:91482342-91482361 Msa1225920:intron 35.0%
ATATATTGTTCTGCTCCATC+TGG - chr8_1:91482636-91482655 None:intergenic 35.0%
CAATACATTCCCATAAATGG+AGG + chr8_1:91482669-91482688 Msa1225920:CDS 35.0%
ACTAGCAACCTGAAGTAAAA+TGG - chr8_1:91482811-91482830 None:intergenic 35.0%
!!! TTACTTCAGGTTGCTAGTTT+TGG + chr8_1:91482813-91482832 Msa1225920:intron 35.0%
TGCGATTTATGTGAATCTCT+TGG - chr8_1:91482882-91482901 None:intergenic 35.0%
ATACAATTTGCCTTGGAAAG+AGG + chr8_1:91482903-91482922 Msa1225920:CDS 35.0%
TCAAATCCAAAAGCAGGAAA+TGG - chr8_1:91482969-91482988 None:intergenic 35.0%
!! TTGACTTGGTTCATTGTTCT+CGG + chr8_1:91482985-91483004 Msa1225920:CDS 35.0%
AACTTACTGTAGGCTGTAAA+CGG - chr8_1:91483020-91483039 None:intergenic 35.0%
TACATGAAAACACTGCAATC+TGG + chr8_1:91483272-91483291 Msa1225920:CDS 35.0%
CTTCCTAATGGAAATGAGTT+TGG + chr8_1:91483319-91483338 Msa1225920:CDS 35.0%
AGACCAAACTCATTTCCATT+AGG - chr8_1:91483325-91483344 None:intergenic 35.0%
GGACATGAATGCATTATATG+GGG + chr8_1:91483752-91483771 Msa1225920:CDS 35.0%
GACATGAATGCATTATATGG+GGG + chr8_1:91483753-91483772 Msa1225920:CDS 35.0%
CTTAAAATCTGATCCTGTGT+GGG + chr8_1:91483788-91483807 Msa1225920:CDS 35.0%
ATCTTTGACAGAGGACTTAT+TGG + chr8_1:91483855-91483874 Msa1225920:CDS 35.0%
GTTCATGCATCTTCTCTTAA+AGG + chr8_1:91483910-91483929 Msa1225920:intron 35.0%
ACATTAGGGTTGTGATCTTA+TGG + chr8_1:91483948-91483967 Msa1225920:intron 35.0%
ATCATGTCTGCAAGGAAAAA+TGG - chr8_1:91484005-91484024 None:intergenic 35.0%
! TTTTTAATCTGGATGCGGTT+CGG + chr8_1:91484230-91484249 Msa1225920:intron 35.0%
CTTGGAGAATCTAAGTTGTA+TGG + chr8_1:91484328-91484347 Msa1225920:intron 35.0%
AACTTATGATCTGATCCATG+TGG + chr8_1:91484390-91484409 Msa1225920:CDS 35.0%
CTTATAAAAGATCCAGCTAC+TGG + chr8_1:91484427-91484446 Msa1225920:CDS 35.0%
ATCCAGCTACTGGTAAAAAA+AGG + chr8_1:91484437-91484456 Msa1225920:CDS 35.0%
!!! TACCTTTTTTTACCAGTAGC+TGG - chr8_1:91484442-91484461 None:intergenic 35.0%
TAATCTGATGTCACATCTCT+AGG + chr8_1:91484480-91484499 Msa1225920:intron 35.0%
! GCAAGGTATTTGATGTTCAA+TGG + chr8_1:91484898-91484917 Msa1225920:intron 35.0%
CGGTTTGACATGAATCTAAT+AGG - chr8_1:91484930-91484949 None:intergenic 35.0%
! ATTGTGAAGAAATCAGGTTG+AGG - chr8_1:91485028-91485047 None:intergenic 35.0%
! GCTACTTTGTCAATTACTTC+GGG - chr8_1:91485137-91485156 None:intergenic 35.0%
! CGCTACTTTGTCAATTACTT+CGG - chr8_1:91485138-91485157 None:intergenic 35.0%
!!! TAGTTTTGACCAAGACCTTA+TGG + chr8_1:91485234-91485253 Msa1225920:CDS 35.0%
AGGTTAGGATTGCCAAAAAT+TGG + chr8_1:91485397-91485416 Msa1225920:three_prime_UTR 35.0%
! TGGAAAAAAGAGTTCTGATC+CGG + chr8_1:91485531-91485550 Msa1225920:three_prime_UTR 35.0%
GGATGTGAGAATAATGTGAG+AGG - chr8_1:91480081-91480100 None:intergenic 40.0%
!!! TCGGTGGTGGTTTTGTTTTT+TGG - chr8_1:91480102-91480121 None:intergenic 40.0%
AATTGATGCAGGTAAACGTG+TGG - chr8_1:91480956-91480975 None:intergenic 40.0%
GGAGAATAAAGTAAGCGTAG+CGG + chr8_1:91481090-91481109 Msa1225920:intron 40.0%
ATGATGTTGCCTTGGATGTA+TGG + chr8_1:91481115-91481134 Msa1225920:intron 40.0%
! ATGGTCTTACCATACATCCA+AGG - chr8_1:91481127-91481146 None:intergenic 40.0%
GGATGTATGGTAAGACCATT+TGG + chr8_1:91481128-91481147 Msa1225920:intron 40.0%
TATGGTAAGACCATTTGGGA+GGG + chr8_1:91481133-91481152 Msa1225920:intron 40.0%
TACAACATTAGAGAGGGAGT+TGG + chr8_1:91481166-91481185 Msa1225920:intron 40.0%
AGCACCTTGAGTAGAAAAGA+TGG + chr8_1:91481192-91481211 Msa1225920:intron 40.0%
ACCTTGAGTAGAAAAGATGG+TGG + chr8_1:91481195-91481214 Msa1225920:intron 40.0%
! TCCACCATCTTTTCTACTCA+AGG - chr8_1:91481199-91481218 None:intergenic 40.0%
TGGTGGAAAATAGACTTAGG+TGG + chr8_1:91481212-91481231 Msa1225920:intron 40.0%
GACCTGTAGATTGTGTAGTA+AGG + chr8_1:91481254-91481273 Msa1225920:intron 40.0%
CTCCTTACTACACAATCTAC+AGG - chr8_1:91481259-91481278 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + chr8_1:91481270-91481289 Msa1225920:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG + chr8_1:91481292-91481311 Msa1225920:intron 40.0%
AGTCAAATCACTAGAGGTAG+AGG + chr8_1:91481298-91481317 Msa1225920:intron 40.0%
CGGCTACATGGATCAAATTA+CGG - chr8_1:91481414-91481433 None:intergenic 40.0%
TGAGGGCAAGATAGTGAAAA+TGG + chr8_1:91481772-91481791 Msa1225920:intron 40.0%
CATGATGCATTATTGGACAC+TGG + chr8_1:91481799-91481818 Msa1225920:intron 40.0%
! TGGTGCCTTGTTATGTAACT+TGG + chr8_1:91481898-91481917 Msa1225920:intron 40.0%
! TGCCTTGTTATGTAACTTGG+AGG + chr8_1:91481901-91481920 Msa1225920:intron 40.0%
! GCCTTGTTATGTAACTTGGA+GGG + chr8_1:91481902-91481921 Msa1225920:intron 40.0%
TCCCTCCAAGTTACATAACA+AGG - chr8_1:91481906-91481925 None:intergenic 40.0%
!!! GACTTAGGAGCTTGTTTTTG+TGG + chr8_1:91481945-91481964 Msa1225920:intron 40.0%
ATGGGATAGTGCTGTATGTT+TGG + chr8_1:91481984-91482003 Msa1225920:intron 40.0%
TGGGATAGTGCTGTATGTTT+GGG + chr8_1:91481985-91482004 Msa1225920:intron 40.0%
TGGGTGTTTAGATATAGGGA+CGG + chr8_1:91482282-91482301 Msa1225920:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG + chr8_1:91482286-91482305 Msa1225920:intron 40.0%
ATATAGAGGTGATAGGCTGA+TGG + chr8_1:91482391-91482410 Msa1225920:intron 40.0%
! TCGATTGATTCATCTGCTCT+TGG + chr8_1:91482434-91482453 Msa1225920:intron 40.0%
AACAAGATTGCTGACAGGAA+AGG + chr8_1:91482546-91482565 Msa1225920:CDS 40.0%
GGTCAACACTTTATATTCCC+CGG + chr8_1:91482594-91482613 Msa1225920:CDS 40.0%
CTCAGAACACCTCCATTTAT+GGG - chr8_1:91482681-91482700 None:intergenic 40.0%
ATCTCTTGGAGCAAAAGACA+TGG - chr8_1:91482868-91482887 None:intergenic 40.0%
ATCGCAGATACAATTTGCCT+TGG + chr8_1:91482896-91482915 Msa1225920:CDS 40.0%
! AGACTTCCATTTCCTGCTTT+TGG + chr8_1:91482960-91482979 Msa1225920:CDS 40.0%
!! TCCTGCTTTTGGATTTGACT+TGG + chr8_1:91482971-91482990 Msa1225920:CDS 40.0%
ACCAAGTCAAATCCAAAAGC+AGG - chr8_1:91482975-91482994 None:intergenic 40.0%
TGCAATGCAGAACTTACTGT+AGG - chr8_1:91483030-91483049 None:intergenic 40.0%
AGATGACTAGATATCCACCA+GGG - chr8_1:91483162-91483181 None:intergenic 40.0%
GGGCTAAACAGGAAAAAGAA+TGG + chr8_1:91483200-91483219 Msa1225920:CDS 40.0%
AAAAGAATGGTCAGATCTCC+AGG + chr8_1:91483213-91483232 Msa1225920:CDS 40.0%
AGTAGTACGTCGTCTATCAA+AGG + chr8_1:91483543-91483562 Msa1225920:CDS 40.0%
CTATTGGAACAATTCCCAAG+TGG + chr8_1:91483574-91483593 Msa1225920:CDS 40.0%
!!! ATACATCAACACCGGTTTTC+AGG - chr8_1:91483638-91483657 None:intergenic 40.0%
!! AACCGGTGTTGATGTATATG+AGG + chr8_1:91483641-91483660 Msa1225920:CDS 40.0%
AGCCTCATATACATCAACAC+CGG - chr8_1:91483646-91483665 None:intergenic 40.0%
TCCATCAATACGCAACGTTA+TGG + chr8_1:91483731-91483750 Msa1225920:CDS 40.0%
TCCATAACGTTGCGTATTGA+TGG - chr8_1:91483735-91483754 None:intergenic 40.0%
! CCACACAGGATCAGATTTTA+AGG - chr8_1:91483790-91483809 None:intergenic 40.0%
CCTTAAAATCTGATCCTGTG+TGG + chr8_1:91483787-91483806 Msa1225920:CDS 40.0%
TCAAAGATCGCATCAAGAGT+TGG - chr8_1:91483843-91483862 None:intergenic 40.0%
GATCACAACCCTAATGTTTC+TGG - chr8_1:91483945-91483964 None:intergenic 40.0%
!!! AGTTGTATGGTTTTGTTCCC+AGG + chr8_1:91484341-91484360 Msa1225920:intron 40.0%
GTTGAAAAAGGTTCACACCT+GGG - chr8_1:91484361-91484380 None:intergenic 40.0%
TGTTGAAAAAGGTTCACACC+TGG - chr8_1:91484362-91484381 None:intergenic 40.0%
! GTTCGAGGGTATGTTGAAAA+AGG - chr8_1:91484373-91484392 None:intergenic 40.0%
GGATCAGATCATAAGTTCGA+GGG - chr8_1:91484387-91484406 None:intergenic 40.0%
TGGATCAGATCATAAGTTCG+AGG - chr8_1:91484388-91484407 None:intergenic 40.0%
ATGTTTCAAAGAAGCAGCAC+AGG - chr8_1:91484722-91484741 None:intergenic 40.0%
GTAGAGTTTGAATCAGTGCA+AGG + chr8_1:91484881-91484900 Msa1225920:intron 40.0%
! AATTGATCGAATTTTGCGGC+CGG + chr8_1:91485085-91485104 Msa1225920:CDS 40.0%
GATAAAGAACCTGACTCACA+CGG + chr8_1:91485197-91485216 Msa1225920:CDS 40.0%
TTAGAGCTTCCATAAGGTCT+TGG - chr8_1:91485246-91485265 None:intergenic 40.0%
TGAGAGTTAGAGCTTCCATA+AGG - chr8_1:91485252-91485271 None:intergenic 40.0%
AACTCTCATTCCACTGACAA+CGG + chr8_1:91485264-91485283 Msa1225920:exon 40.0%
CTAAATAACACCGTTGTCAG+TGG - chr8_1:91485277-91485296 None:intergenic 40.0%
!! CACTGACAACGGTGTTATTT+AGG + chr8_1:91485275-91485294 Msa1225920:three_prime_UTR 40.0%
TTCCCTTTATTGTTCAGTGG+TGG + chr8_1:91485303-91485322 Msa1225920:three_prime_UTR 40.0%
CACCACCACTGAACAATAAA+GGG - chr8_1:91485308-91485327 None:intergenic 40.0%
ACACCACCACTGAACAATAA+AGG - chr8_1:91485309-91485328 None:intergenic 40.0%
!! TTACGAAGTGTTGTTGTCGG+TGG - chr8_1:91480118-91480137 None:intergenic 45.0%
!! ACGCATTTTGAGGAAGAAGG+TGG - chr8_1:91480334-91480353 None:intergenic 45.0%
!! GTGACGCATTTTGAGGAAGA+AGG - chr8_1:91480337-91480356 None:intergenic 45.0%
GTCACTCAAATTTCCCACCA+TGG + chr8_1:91480352-91480371 Msa1225920:CDS 45.0%
! GTTCTCTTTTACACCACCCT+TGG + chr8_1:91480453-91480472 Msa1225920:CDS 45.0%
TTGTGGTGGCTATTGAGGAA+GGG + chr8_1:91480529-91480548 Msa1225920:CDS 45.0%
ATATGATCCACCTCACTTGC+AGG - chr8_1:91480585-91480604 None:intergenic 45.0%
CTCAACTGACTATTCCTCCT+CGG - chr8_1:91480621-91480640 None:intergenic 45.0%
TGTTTGATTCCACCGCCTAA+TGG + chr8_1:91480699-91480718 Msa1225920:CDS 45.0%
GTTTGATTCCACCGCCTAAT+GGG + chr8_1:91480700-91480719 Msa1225920:CDS 45.0%
CACACCTTATGCATGCTTTC+AGG - chr8_1:91480747-91480766 None:intergenic 45.0%
! CTGAAAGCATGCATAAGGTG+TGG + chr8_1:91480745-91480764 Msa1225920:intron 45.0%
GTATGGTAAGACCATTTGGG+AGG + chr8_1:91481132-91481151 Msa1225920:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr8_1:91481273-91481292 Msa1225920:intron 45.0%
CTTATCCCACTAAGTGGAGT+CGG - chr8_1:91481434-91481453 None:intergenic 45.0%
ACTGAGAAGCTACTGCAATG+AGG + chr8_1:91481754-91481773 Msa1225920:intron 45.0%
CTGAGAAGCTACTGCAATGA+GGG + chr8_1:91481755-91481774 Msa1225920:intron 45.0%
GATGCATTATTGGACACTGG+TGG + chr8_1:91481802-91481821 Msa1225920:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr8_1:91482040-91482059 None:intergenic 45.0%
AGCAAAGGGGGGTTACATTA+AGG - chr8_1:91482041-91482060 None:intergenic 45.0%
GTGTTTAGATATAGGGACGG+AGG + chr8_1:91482285-91482304 Msa1225920:intron 45.0%
! CTGTCAGCAATCTTGTTGTG+GGG - chr8_1:91482543-91482562 None:intergenic 45.0%
! CCTGTCAGCAATCTTGTTGT+GGG - chr8_1:91482544-91482563 None:intergenic 45.0%
TCCTGTCAGCAATCTTGTTG+TGG - chr8_1:91482545-91482564 None:intergenic 45.0%
CAACACTTTATATTCCCCGG+TGG + chr8_1:91482597-91482616 Msa1225920:CDS 45.0%
CCTCAGAACACCTCCATTTA+TGG - chr8_1:91482682-91482701 None:intergenic 45.0%
!! CCATAAATGGAGGTGTTCTG+AGG + chr8_1:91482679-91482698 Msa1225920:CDS 45.0%
!!! CTTCAGGTTGCTAGTTTTGG+AGG + chr8_1:91482816-91482835 Msa1225920:intron 45.0%
TGCCTTGGAAAGAGGAATAC+CGG + chr8_1:91482911-91482930 Msa1225920:CDS 45.0%
CCAAGCATAGCAACAAAAGC+CGG - chr8_1:91482933-91482952 None:intergenic 45.0%
GAGATGACTAGATATCCACC+AGG - chr8_1:91483163-91483182 None:intergenic 45.0%
GGTGGATATCTAGTCATCTC+CGG + chr8_1:91483163-91483182 Msa1225920:CDS 45.0%
GCAGATTCGTGTCTTCCTAA+TGG + chr8_1:91483307-91483326 Msa1225920:CDS 45.0%
ACTACATTCATCACCCACAC+AGG - chr8_1:91483804-91483823 None:intergenic 45.0%
AAGATCGCATCAAGAGTTGG+TGG - chr8_1:91483840-91483859 None:intergenic 45.0%
CTTGATGCGATCTTTGACAG+AGG + chr8_1:91483846-91483865 Msa1225920:CDS 45.0%
AACTTACAGCAACAGCCTCT+AGG + chr8_1:91484951-91484970 Msa1225920:intron 45.0%
AGTAGCGCGAATTTCTCATG+CGG + chr8_1:91485151-91485170 Msa1225920:CDS 45.0%
TGTTGGTGCGTTTCCATGGT+GGG - chr8_1:91480368-91480387 None:intergenic 50.0%
AACGCACCAACACACGTCAA+TGG + chr8_1:91480376-91480395 Msa1225920:CDS 50.0%
TGTTGTGGATCAACGGTGGA+CGG - chr8_1:91480498-91480517 None:intergenic 50.0%
GTTGCGCTGTTGTGGATCAA+CGG - chr8_1:91480505-91480524 None:intergenic 50.0%
CCTCAATAGCCACCACAAGA+CGG - chr8_1:91480527-91480546 None:intergenic 50.0%
CTTGTGGTGGCTATTGAGGA+AGG + chr8_1:91480528-91480547 Msa1225920:CDS 50.0%
GGAGAGACATTGTCCTTTGC+CGG + chr8_1:91480662-91480681 Msa1225920:CDS 50.0%
AAACAAACCGCAGTCTCCTC+CGG - chr8_1:91480684-91480703 None:intergenic 50.0%
! TTCCACCGCCTAATGGGTAT+CGG + chr8_1:91480706-91480725 Msa1225920:CDS 50.0%
! GTGGCCTGAAAGCATGCATA+AGG + chr8_1:91480740-91480759 Msa1225920:CDS 50.0%
CATAGTGACACTGACACACG+TGG + chr8_1:91480902-91480921 Msa1225920:intron 50.0%
TAGCGGAGATGATGTTGCCT+TGG + chr8_1:91481107-91481126 Msa1225920:intron 50.0%
ACTAAGTGGAGTCGGCTACA+TGG - chr8_1:91481426-91481445 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG + chr8_1:91481425-91481444 Msa1225920:intron 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr8_1:91481426-91481445 Msa1225920:intron 50.0%
CGACTCCACTTAGTGGGATA+AGG + chr8_1:91481432-91481451 Msa1225920:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr8_1:91481440-91481459 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr8_1:91481437-91481456 Msa1225920:intron 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr8_1:91482032-91482051 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr8_1:91482036-91482055 None:intergenic 50.0%
GAGGTGATAGGCTGATGGAA+TGG + chr8_1:91482396-91482415 Msa1225920:intron 50.0%
CCCACAACAAGATTGCTGAC+AGG + chr8_1:91482541-91482560 Msa1225920:CDS 50.0%
CACTTTATATTCCCCGGTGG+TGG + chr8_1:91482600-91482619 Msa1225920:CDS 50.0%
TGGAAACATCGTACCACCAC+CGG - chr8_1:91482616-91482635 None:intergenic 50.0%
GGTGGTACGATGTTTCCAGA+TGG + chr8_1:91482618-91482637 Msa1225920:CDS 50.0%
TCTGAGGACTGCACTTGACA+TGG + chr8_1:91482695-91482714 Msa1225920:CDS 50.0%
CTGAGGACTGCACTTGACAT+GGG + chr8_1:91482696-91482715 Msa1225920:CDS 50.0%
ACTGCACTTGACATGGGATG+TGG + chr8_1:91482702-91482721 Msa1225920:CDS 50.0%
CTGCACTTGACATGGGATGT+GGG + chr8_1:91482703-91482722 Msa1225920:CDS 50.0%
TGCACTTGACATGGGATGTG+GGG + chr8_1:91482704-91482723 Msa1225920:CDS 50.0%
AGCCGGTATTCCTCTTTCCA+AGG - chr8_1:91482916-91482935 None:intergenic 50.0%
! CCGGCTTTTGTTGCTATGCT+TGG + chr8_1:91482930-91482949 Msa1225920:CDS 50.0%
GTGGATAGATTACTTCGCCC+TGG + chr8_1:91483142-91483161 Msa1225920:CDS 50.0%
GATAGATTACTTCGCCCTGG+TGG + chr8_1:91483145-91483164 Msa1225920:CDS 50.0%
!!! AACACCGGTTTTCAGGAGAG+GGG - chr8_1:91483631-91483650 None:intergenic 50.0%
!!! CAACACCGGTTTTCAGGAGA+GGG - chr8_1:91483632-91483651 None:intergenic 50.0%
!!! TCAACACCGGTTTTCAGGAG+AGG - chr8_1:91483633-91483652 None:intergenic 50.0%
ATGAGGCTGACACTAAGCTG+TGG + chr8_1:91483658-91483677 Msa1225920:CDS 50.0%
TGAGGCTGACACTAAGCTGT+GGG + chr8_1:91483659-91483678 Msa1225920:CDS 50.0%
CTGACACTAAGCTGTGGGTA+CGG + chr8_1:91483664-91483683 Msa1225920:CDS 50.0%
!!! AGAGTTGGTGGCTTTTGAGC+TGG - chr8_1:91483828-91483847 None:intergenic 50.0%
GTGATTCAATGCTGGCCACA+TGG - chr8_1:91484408-91484427 None:intergenic 50.0%
GAGGCTGTTGCTGTAAGTTG+CGG - chr8_1:91484950-91484969 None:intergenic 50.0%
CTTACCACAACAGTTCCCTC+CGG - chr8_1:91485107-91485126 None:intergenic 50.0%
GAATTTCTCATGCGGTGAGG+TGG + chr8_1:91485159-91485178 Msa1225920:CDS 50.0%
! TTTTCTCTGCCGTGTGAGTC+AGG - chr8_1:91485209-91485228 None:intergenic 50.0%
!! CGAAGTGTTGTTGTCGGTGG+TGG - chr8_1:91480115-91480134 None:intergenic 55.0%
! GTGTTGGTGCGTTTCCATGG+TGG - chr8_1:91480369-91480388 None:intergenic 55.0%
! CGTGTGTTGGTGCGTTTCCA+TGG - chr8_1:91480372-91480391 None:intergenic 55.0%
GAGACGCCATTGACGTGTGT+TGG - chr8_1:91480385-91480404 None:intergenic 55.0%
ACAAGACGGTTGCGCTGTTG+TGG - chr8_1:91480513-91480532 None:intergenic 55.0%
ACAACAGCGCAACCGTCTTG+TGG + chr8_1:91480512-91480531 Msa1225920:CDS 55.0%
CCGTCTTGTGGTGGCTATTG+AGG + chr8_1:91480524-91480543 Msa1225920:CDS 55.0%
TGAGGCTTGTCCTGCAAGTG+AGG + chr8_1:91480572-91480591 Msa1225920:CDS 55.0%
GGTGGATCATATGCCGTGTG+AGG + chr8_1:91480593-91480612 Msa1225920:CDS 55.0%
ATATGCCGTGTGAGGATCCG+AGG + chr8_1:91480601-91480620 Msa1225920:CDS 55.0%
TTCCTCCTCGGATCCTCACA+CGG - chr8_1:91480609-91480628 None:intergenic 55.0%
GAGACATTGTCCTTTGCCGG+AGG + chr8_1:91480665-91480684 Msa1225920:CDS 55.0%
! TCCACCGCCTAATGGGTATC+GGG + chr8_1:91480707-91480726 Msa1225920:CDS 55.0%
GGAACCCGATACCCATTAGG+CGG - chr8_1:91480714-91480733 None:intergenic 55.0%
!! GCCTAATGGGTATCGGGTTC+CGG + chr8_1:91480713-91480732 Msa1225920:CDS 55.0%
ACCGGAACCCGATACCCATT+AGG - chr8_1:91480717-91480736 None:intergenic 55.0%
ATGCTTTCAGGCCACCTCAC+CGG - chr8_1:91480735-91480754 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr8_1:91482033-91482052 None:intergenic 55.0%
TGCTGACAGGAAAGGTCACC+AGG + chr8_1:91482554-91482573 Msa1225920:CDS 55.0%
GCTGACAGGAAAGGTCACCA+GGG + chr8_1:91482555-91482574 Msa1225920:CDS 55.0%
CTGACAGGAAAGGTCACCAG+GGG + chr8_1:91482556-91482575 Msa1225920:CDS 55.0%
CTTCTCGTTTCATCCACCCC+TGG - chr8_1:91482575-91482594 None:intergenic 55.0%
CAGGGGTGGATGAAACGAGA+AGG + chr8_1:91482573-91482592 Msa1225920:CDS 55.0%
GAAACATCGTACCACCACCG+GGG - chr8_1:91482614-91482633 None:intergenic 55.0%
GGAAACATCGTACCACCACC+GGG - chr8_1:91482615-91482634 None:intergenic 55.0%
TCATCTCCGGTCCTCCTGTT+CGG + chr8_1:91483176-91483195 Msa1225920:CDS 55.0%
TGTTTAGCCCACCGAACAGG+AGG - chr8_1:91483190-91483209 None:intergenic 55.0%
!! TCCTGTTCGGTGGGCTAAAC+AGG + chr8_1:91483189-91483208 Msa1225920:CDS 55.0%
TCCTGTTTAGCCCACCGAAC+AGG - chr8_1:91483193-91483212 None:intergenic 55.0%
ATGGTCAGATCTCCAGGCTG+TGG + chr8_1:91483219-91483238 Msa1225920:CDS 55.0%
AGATCTCCAGGCTGTGGCAA+AGG + chr8_1:91483225-91483244 Msa1225920:CDS 55.0%
GGAAGACACGAATCTGCTGC+TGG - chr8_1:91483304-91483323 None:intergenic 55.0%
CTGGGGACCTAAGTCAAGCT+TGG + chr8_1:91483362-91483381 Msa1225920:CDS 55.0%
CAATTCCCAAGTGGCCAGAG+AGG + chr8_1:91483583-91483602 Msa1225920:CDS 55.0%
! GTTAGCCTCTCTGGCCACTT+GGG - chr8_1:91483591-91483610 None:intergenic 55.0%
! AGTTAGCCTCTCTGGCCACT+TGG - chr8_1:91483592-91483611 None:intergenic 55.0%
AGGTCCCCTCTCCTGAAAAC+CGG + chr8_1:91483624-91483643 Msa1225920:CDS 55.0%
ACACTAAGCTGTGGGTACGG+AGG + chr8_1:91483667-91483686 Msa1225920:CDS 55.0%
CACTAAGCTGTGGGTACGGA+GGG + chr8_1:91483668-91483687 Msa1225920:CDS 55.0%
! TGATCGAATTTTGCGGCCGG+AGG + chr8_1:91485088-91485107 Msa1225920:CDS 55.0%
! GATCGAATTTTGCGGCCGGA+GGG + chr8_1:91485089-91485108 Msa1225920:CDS 55.0%
CGCGAATTTCTCATGCGGTG+AGG + chr8_1:91485156-91485175 Msa1225920:CDS 55.0%
GCGCTGTTGTGGATCAACGG+TGG - chr8_1:91480502-91480521 None:intergenic 60.0%
ACAGCGCAACCGTCTTGTGG+TGG + chr8_1:91480515-91480534 Msa1225920:CDS 60.0%
GGCTTGTCCTGCAAGTGAGG+TGG + chr8_1:91480575-91480594 Msa1225920:CDS 60.0%
TCCTTTGCCGGAGGAGACTG+CGG + chr8_1:91480674-91480693 Msa1225920:CDS 60.0%
ACCCGATACCCATTAGGCGG+TGG - chr8_1:91480711-91480730 None:intergenic 60.0%
!! ATGGGTATCGGGTTCCGGTG+AGG + chr8_1:91480718-91480737 Msa1225920:CDS 60.0%
ACAGGAAAGGTCACCAGGGG+TGG + chr8_1:91482559-91482578 Msa1225920:CDS 60.0%
CATGGGATGTGGGGTAAGCG+AGG + chr8_1:91482713-91482732 Msa1225920:intron 60.0%
ACAAGGCCTTTGCCACAGCC+TGG - chr8_1:91483234-91483253 None:intergenic 60.0%
TTCAGGAGAGGGGACCTCGA+AGG - chr8_1:91483621-91483640 None:intergenic 60.0%
TGCCGTGTGAGGATCCGAGG+AGG + chr8_1:91480604-91480623 Msa1225920:CDS 65.0%
ACCGCAGTCTCCTCCGGCAA+AGG - chr8_1:91480678-91480697 None:intergenic 65.0%
! GGTATCGGGTTCCGGTGAGG+TGG + chr8_1:91480721-91480740 Msa1225920:CDS 65.0%
TCTCCGGTCCTCCTGTTCGG+TGG + chr8_1:91483179-91483198 Msa1225920:CDS 65.0%
CTCCGGTCCTCCTGTTCGGT+GGG + chr8_1:91483180-91483199 Msa1225920:CDS 65.0%
AGCCCACCGAACAGGAGGAC+CGG - chr8_1:91483185-91483204 None:intergenic 65.0%
! GGTGCGGCAGTTAGCCTCTC+TGG - chr8_1:91483600-91483619 None:intergenic 65.0%
GGCTAACTGCCGCACCTTCG+AGG + chr8_1:91483604-91483623 Msa1225920:CDS 65.0%
GAGAGGGGACCTCGAAGGTG+CGG - chr8_1:91483616-91483635 None:intergenic 65.0%
CAGCACACGGCGGCGACCAA+GGG - chr8_1:91480472-91480491 None:intergenic 70.0%
TGGACGGAGCCAGCACACGG+CGG - chr8_1:91480482-91480501 None:intergenic 70.0%
CGGTGGACGGAGCCAGCACA+CGG - chr8_1:91480485-91480504 None:intergenic 70.0%
GCGGCCGGAGGGAACTGTTG+TGG + chr8_1:91485100-91485119 Msa1225920:CDS 70.0%
CACACGGCGGCGACCAAGGG+TGG - chr8_1:91480469-91480488 None:intergenic 75.0%
CCAGCACACGGCGGCGACCA+AGG - chr8_1:91480473-91480492 None:intergenic 75.0%
CCTTGGTCGCCGCCGTGTGC+TGG + chr8_1:91480470-91480489 Msa1225920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 91479978 91485564 91479978 ID=Msa1225920;Name=Msa1225920
chr8_1 mRNA 91479978 91485564 91479978 ID=Msa1225920-mRNA-1;Parent=Msa1225920;Name=Msa1225920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=370|1|1|1|1|1|7|299|589
chr8_1 exon 91479978 91480761 91479978 ID=Msa1225920-mRNA-1:exon:33347;Parent=Msa1225920-mRNA-1
chr8_1 exon 91482522 91482725 91482522 ID=Msa1225920-mRNA-1:exon:33348;Parent=Msa1225920-mRNA-1
chr8_1 exon 91482822 91483032 91482822 ID=Msa1225920-mRNA-1:exon:33349;Parent=Msa1225920-mRNA-1
chr8_1 exon 91483122 91483383 91483122 ID=Msa1225920-mRNA-1:exon:33350;Parent=Msa1225920-mRNA-1
chr8_1 exon 91483518 91483892 91483518 ID=Msa1225920-mRNA-1:exon:33351;Parent=Msa1225920-mRNA-1
chr8_1 exon 91484363 91484458 91484363 ID=Msa1225920-mRNA-1:exon:33352;Parent=Msa1225920-mRNA-1
chr8_1 exon 91485058 91485564 91485058 ID=Msa1225920-mRNA-1:exon:33353;Parent=Msa1225920-mRNA-1
chr8_1 five_prime_UTR 91479978 91480347 91479978 ID=Msa1225920-mRNA-1:five_prime_utr;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91480348 91480761 91480348 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91482522 91482725 91482522 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91482822 91483032 91482822 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91483122 91483383 91483122 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91483518 91483892 91483518 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91484363 91484458 91484363 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 CDS 91485058 91485265 91485058 ID=Msa1225920-mRNA-1:cds;Parent=Msa1225920-mRNA-1
chr8_1 three_prime_UTR 91485266 91485564 91485266 ID=Msa1225920-mRNA-1:three_prime_utr;Parent=Msa1225920-mRNA-1
Gene Sequence

>Msa1225920

ATGCGTCACTCAAATTTCCCACCATGGAAACGCACCAACACACGTCAATGGCGTCTCATCGACCTCATTTCCATTGCCTTTTTCTCATTACTCTTTCTCTTCTTTGTTCTCTTTTACACCACCCTTGGTCGCCGCCGTGTGCTGGCTCCGTCCACCGTTGATCCACAACAGCGCAACCGTCTTGTGGTGGCTATTGAGGAAGGGATGTTAAATGGGAAGAGTATTGAGGCTTGTCCTGCAAGTGAGGTGGATCATATGCCGTGTGAGGATCCGAGGAGGAATAGTCAGTTGAGTAGAGAGATGAATTACTATAGGGAGAGACATTGTCCTTTGCCGGAGGAGACTGCGGTTTGTTTGATTCCACCGCCTAATGGGTATCGGGTTCCGGTGAGGTGGCCTGAAAGCATGCATAAGATATGGCATAGCAACATGCCCCACAACAAGATTGCTGACAGGAAAGGTCACCAGGGGTGGATGAAACGAGAAGGTCAACACTTTATATTCCCCGGTGGTGGTACGATGTTTCCAGATGGAGCAGAACAATATATCAAAAAACTTAGTCAATACATTCCCATAAATGGAGGTGTTCTGAGGACTGCACTTGACATGGGATGTGGGGTTGCTAGTTTTGGAGGATATTTACTAGCTCAAGATATTTTAACCATGTCTTTTGCTCCAAGAGATTCACATAAATCGCAGATACAATTTGCCTTGGAAAGAGGAATACCGGCTTTTGTTGCTATGCTTGGCACTCAAAGACTTCCATTTCCTGCTTTTGGATTTGACTTGGTTCATTGTTCTCGGTGTTTGATACCGTTTACAGCCTACAATGCAACTTATTTCATTGAAGTGGATAGATTACTTCGCCCTGGTGGATATCTAGTCATCTCCGGTCCTCCTGTTCGGTGGGCTAAACAGGAAAAAGAATGGTCAGATCTCCAGGCTGTGGCAAAGGCCTTGTGTTATGAACAGATAACTGTACATGAAAACACTGCAATCTGGAAGAAGCCAGCAGCAGATTCGTGTCTTCCTAATGGAAATGAGTTTGGTCTTGAATTATGTGATGATTCTGGGGACCTAAGTCAAGCTTGGTACTTTAAATTGAAGAGATGTGTAAGTAGTACGTCGTCTATCAAAGGAGATTATGCTATTGGAACAATTCCCAAGTGGCCAGAGAGGCTAACTGCCGCACCTTCGAGGTCCCCTCTCCTGAAAACCGGTGTTGATGTATATGAGGCTGACACTAAGCTGTGGGTACGGAGGGTTGCACATTATAAGAATTCACTAAATATAAAGTTGGGGACTCCATCAATACGCAACGTTATGGACATGAATGCATTATATGGGGGTTTTGCAGCTGCCTTAAAATCTGATCCTGTGTGGGTGATGAATGTAGTTCCAGCTCAAAAGCCACCAACTCTTGATGCGATCTTTGACAGAGGACTTATTGGTGTCTATCATGATTGGTGTGAACCTTTTTCAACATACCCTCGAACTTATGATCTGATCCATGTGGCCAGCATTGAATCACTTATAAAAGATCCAGCTACTGGTAAAAAAAGATGTAATATTGTTGATTTGATGGTGGAAATTGATCGAATTTTGCGGCCGGAGGGAACTGTTGTGGTAAGAGATGCTCCCGAAGTAATTGACAAAGTAGCGCGAATTTCTCATGCGGTGAGGTGGAAGCCGACCATTTATGATAAAGAACCTGACTCACACGGCAGAGAAAAAATTCTAGTTTTGACCAAGACCTTATGGAAGCTCTAA
Protein sequence

>Msa1225920

MRHSNFPPWKRTNTRQWRLIDLISIAFFSLLFLFFVLFYTTLGRRRVLAPSTVDPQQRNRLVVAIEEGMLNGKSIEACPASEVDHMPCEDPRRNSQLSREMNYYRERHCPLPEETAVCLIPPPNGYRVPVRWPESMHKIWHSNMPHNKIADRKGHQGWMKREGQHFIFPGGGTMFPDGAEQYIKKLSQYIPINGGVLRTALDMGCGVASFGGYLLAQDILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTQRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVRWAKQEKEWSDLQAVAKALCYEQITVHENTAIWKKPAADSCLPNGNEFGLELCDDSGDLSQAWYFKLKRCVSSTSSIKGDYAIGTIPKWPERLTAAPSRSPLLKTGVDVYEADTKLWVRRVAHYKNSLNIKLGTPSIRNVMDMNALYGGFAAALKSDPVWVMNVVPAQKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHVASIESLIKDPATGKKRCNIVDLMVEIDRILRPEGTVVVRDAPEVIDKVARISHAVRWKPTIYDKEPDSHGREKILVLTKTLWKL*