AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1155100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155100 MtrunA17_Chr7g0246681 98.132 589 11 0 1 589 1 589 0.0 1209
Msa1155100 MtrunA17_Chr8g0350351 78.512 605 111 3 1 589 1 602 0.0 969
Msa1155100 MtrunA17_Chr8g0388881 45.779 533 263 8 73 587 96 620 1.68e-170 498
Msa1155100 MtrunA17_Chr1g0203741 40.843 617 327 10 2 587 8 617 2.30e-168 493
Msa1155100 MtrunA17_Chr4g0055031 46.014 552 259 11 58 587 69 603 2.67e-168 492
Msa1155100 MtrunA17_Chr7g0246701 46.415 530 256 9 78 587 104 625 2.07e-165 486
Msa1155100 MtrunA17_Chr8g0361791 45.203 542 269 8 62 587 71 600 3.78e-165 484
Msa1155100 MtrunA17_Chr8g0350391 44.991 529 266 7 78 587 108 630 8.93e-165 484
Msa1155100 MtrunA17_Chr5g0416991 44.587 545 267 9 62 587 71 599 4.96e-163 478
Msa1155100 MtrunA17_Chr6g0472571 44.045 529 267 9 78 587 108 626 2.27e-161 475
Msa1155100 MtrunA17_Chr8g0369481 43.454 527 270 8 78 587 73 588 1.13e-155 459
Msa1155100 MtrunA17_Chr7g0214551 43.470 536 269 10 75 585 43 569 9.38e-154 453
Msa1155100 MtrunA17_Chr3g0092501 43.691 531 267 8 73 587 83 597 3.12e-151 448
Msa1155100 MtrunA17_Chr5g0409411 43.503 531 274 9 74 588 71 591 1.50e-147 438
Msa1155100 MtrunA17_Chr1g0167381 40.669 568 308 9 42 587 55 615 1.07e-145 434
Msa1155100 MtrunA17_Chr1g0183721 38.648 577 328 9 29 587 17 585 1.22e-143 428
Msa1155100 MtrunA17_Chr3g0130381 41.468 545 283 12 65 588 248 777 3.50e-143 433
Msa1155100 MtrunA17_Chr1g0187601 41.296 540 292 9 66 587 82 614 4.99e-141 422
Msa1155100 MtrunA17_Chr3g0125511 41.431 531 273 14 80 588 229 743 2.78e-139 422
Msa1155100 MtrunA17_Chr8g0384431 42.231 502 255 11 84 563 298 786 1.91e-138 422
Msa1155100 MtrunA17_Chr5g0437501 41.255 526 270 12 83 588 100 606 3.07e-138 415
Msa1155100 MtrunA17_Chr3g0112341 42.155 529 279 11 73 586 151 667 9.00e-137 413
Msa1155100 MtrunA17_Chr3g0113981 40.561 535 288 8 63 588 156 669 8.02e-136 410
Msa1155100 MtrunA17_Chr5g0435751 39.927 551 286 11 50 586 100 619 3.31e-135 407
Msa1155100 MtrunA17_Chr1g0171781 40.189 530 292 9 75 589 86 605 5.07e-135 406
Msa1155100 MtrunA17_Chr8g0372471 41.731 520 275 9 83 588 386 891 2.24e-134 414
Msa1155100 MtrunA17_Chr1g0159741 41.040 519 277 11 83 584 150 656 1.89e-130 396
Msa1155100 MtrunA17_Chr5g0426281 33.092 553 324 12 65 588 136 671 1.92e-97 311
Msa1155100 MtrunA17_Chr3g0115931 32.605 549 326 14 73 588 152 689 7.34e-91 294
Msa1155100 MtrunA17_Chr1g0155141 34.669 499 287 13 104 588 227 700 3.43e-89 290
Msa1155100 MtrunA17_Chr5g0404771 48.879 223 108 3 83 301 328 548 4.60e-72 241
Msa1155100 MtrunA17_Chr4g0043121 29.114 395 251 8 6 377 13 401 3.23e-54 190
Msa1155100 MtrunA17_Chr5g0404761 36.934 287 156 7 313 588 1 273 6.93e-54 184
Msa1155100 MtrunA17_Chr4g0043131 46.405 153 73 3 438 588 39 184 1.52e-36 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1155100 AT4G00740.1 72.315 596 157 2 1 589 1 595 0.0 937
Msa1155100 AT4G00740.2 72.315 596 157 2 1 589 1 595 0.0 937
Msa1155100 AT4G00750.1 45.810 537 259 7 74 587 95 622 6.53e-167 489
Msa1155100 AT4G10440.1 44.404 545 274 9 63 587 81 616 4.30e-166 488
Msa1155100 AT1G33170.1 43.088 557 289 8 50 587 87 634 2.03e-164 483
Msa1155100 AT2G45750.1 44.527 539 269 8 74 589 86 617 7.68e-163 479
Msa1155100 AT1G31850.1 41.864 590 306 11 25 587 17 596 4.70e-161 473
Msa1155100 AT1G31850.2 41.864 590 306 11 25 587 17 596 4.70e-161 473
Msa1155100 AT1G31850.4 41.864 590 306 11 25 587 17 596 4.70e-161 473
Msa1155100 AT1G31850.3 41.864 590 306 11 25 587 17 596 4.70e-161 473
Msa1155100 AT1G26850.2 45.047 535 264 10 73 587 84 608 1.14e-159 470
Msa1155100 AT1G26850.1 45.047 535 264 10 73 587 84 608 1.14e-159 470
Msa1155100 AT4G19120.1 43.962 530 273 8 74 587 69 590 8.63e-159 468
Msa1155100 AT4G19120.2 43.962 530 273 8 74 587 69 590 8.63e-159 468
Msa1155100 AT4G18030.1 45.386 531 262 9 74 587 84 603 2.66e-157 464
Msa1155100 AT2G43200.2 43.429 525 273 9 78 586 94 610 4.71e-151 448
Msa1155100 AT2G43200.1 43.429 525 273 9 78 586 94 610 4.71e-151 448
Msa1155100 AT3G23300.2 41.989 543 288 9 65 587 66 601 4.98e-147 438
Msa1155100 AT3G23300.1 41.989 543 288 9 65 587 66 601 4.98e-147 438
Msa1155100 AT4G14360.1 43.676 506 263 7 73 563 74 572 2.15e-145 434
Msa1155100 AT4G14360.2 43.676 506 263 7 73 563 74 572 2.15e-145 434
Msa1155100 AT1G04430.1 37.851 605 331 9 22 587 15 613 1.89e-144 432
Msa1155100 AT1G04430.3 37.851 605 331 9 22 587 15 613 1.89e-144 432
Msa1155100 AT1G04430.2 37.851 605 331 9 22 587 15 613 1.89e-144 432
Msa1155100 AT2G34300.2 43.074 527 260 14 84 588 250 758 3.22e-143 433
Msa1155100 AT2G34300.3 43.074 527 260 14 84 588 250 758 3.22e-143 433
Msa1155100 AT2G34300.1 43.074 527 260 14 84 588 250 758 3.22e-143 433
Msa1155100 AT5G64030.1 42.803 528 261 13 84 588 308 817 3.94e-142 432
Msa1155100 AT1G29470.1 42.125 527 265 12 84 588 250 758 2.06e-140 426
Msa1155100 AT1G29470.2 42.125 527 265 12 84 588 250 758 2.06e-140 426
Msa1155100 AT2G39750.1 40.789 532 282 13 73 586 175 691 4.58e-137 415
Msa1155100 AT1G77260.1 40.038 532 284 13 73 586 141 655 8.55e-137 413
Msa1155100 AT5G06050.1 40.530 528 285 11 73 584 147 661 9.93e-137 414
Msa1155100 AT3G10200.1 41.026 546 289 11 60 589 62 590 3.80e-136 409
Msa1155100 AT2G40280.1 40.179 560 287 16 46 588 54 582 4.89e-134 404
Msa1155100 AT3G51070.1 40.107 561 300 12 49 588 345 890 5.82e-134 413
Msa1155100 AT5G14430.1 41.091 550 300 8 58 589 63 606 2.47e-133 403
Msa1155100 AT5G04060.1 39.338 544 299 9 60 589 73 599 6.09e-132 399
Msa1155100 AT3G56080.1 41.313 518 269 13 84 588 114 609 1.52e-131 398
Msa1155100 AT4G19120.3 44.907 432 221 5 74 489 69 499 1.73e-131 394
Msa1155100 AT5G14430.2 40.727 550 302 8 58 589 63 606 2.88e-131 397
Msa1155100 AT3G10200.2 42.596 493 253 9 60 538 62 538 6.76e-128 388
Msa1155100 AT3G51070.2 40.900 489 263 10 46 513 342 825 4.67e-120 375
Msa1155100 AT1G26850.3 44.928 414 205 8 73 467 84 493 4.64e-119 362
Msa1155100 AT3G56080.2 43.119 436 227 11 84 506 114 541 3.44e-117 359
Msa1155100 AT1G19430.1 35.000 520 302 12 81 588 228 723 8.38e-96 308
Msa1155100 AT1G19430.3 35.000 520 302 12 81 588 228 723 8.38e-96 308
Msa1155100 AT1G78240.1 33.396 533 320 12 73 576 144 670 1.24e-92 299
Msa1155100 AT1G78240.2 33.396 533 320 12 73 576 144 670 1.24e-92 299
Msa1155100 AT1G13860.4 32.370 519 298 11 106 588 101 602 2.02e-87 283
Msa1155100 AT1G13860.3 32.370 519 298 11 106 588 101 602 2.02e-87 283
Msa1155100 AT1G13860.1 32.370 519 298 11 106 588 101 602 2.02e-87 283
Msa1155100 AT1G13860.5 32.370 519 298 11 106 588 101 602 2.02e-87 283
Msa1155100 AT2G03480.2 30.839 548 310 11 73 588 84 594 2.27e-84 275
Msa1155100 AT2G03480.1 31.009 545 324 12 73 588 84 605 2.55e-82 270
Msa1155100 AT1G13860.2 32.538 461 265 9 159 588 1 446 9.57e-78 253
Msa1155100 AT1G19430.2 31.937 382 235 9 81 451 228 595 2.85e-54 194
Msa1155100 AT2G03480.3 28.750 320 211 5 73 377 84 401 2.88e-44 163

Find 200 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAGAACACCTCCATTTA+TGG 0.152108 7_4:+42935446 None:intergenic
AGACTTCCATTTCCTGCTTT+TGG 0.176323 7_4:-42935165 Msa1155100:CDS
GATCTGATTAATAAGCTATT+TGG 0.180942 7_4:+42937561 None:intergenic
CACTGACAACGGTGTAATTT+AGG 0.205299 7_4:-42932862 Msa1155100:three_prime_UTR
CACACCTTATGCATGCTTTC+AGG 0.213467 7_4:+42937126 None:intergenic
GAGAAAGAGTAATGAGAAAA+AGG 0.217310 7_4:+42937446 None:intergenic
TTACTTCAGGTTGCTAGTTT+TGG 0.217337 7_4:-42935312 Msa1155100:intron
ATTGAGGAAGGGATGTTAAA+TGG 0.234055 7_4:-42937330 Msa1155100:CDS
ATCTTTGACAGAGGACTTAT+TGG 0.248824 7_4:-42934270 Msa1155100:CDS
CTTGAATTATGTGATGATTC+TGG 0.250630 7_4:-42934782 Msa1155100:CDS
ATGGACATGAATGCATTATA+TGG 0.268695 7_4:-42934375 Msa1155100:CDS
GTTCGAGGGTATGTTGAAAA+AGG 0.289047 7_4:+42933767 None:intergenic
AGTCAATACATTCCCATAAA+TGG 0.293619 7_4:-42935459 Msa1155100:CDS
TCCTGTTCGGTGGGCTAAAC+AGG 0.305359 7_4:-42934936 Msa1155100:CDS
TTCATATAAAGAAAACATTA+AGG 0.306553 7_4:-42932760 Msa1155100:three_prime_UTR
GTCAGGTTCTTTATCATAAA+TGG 0.310121 7_4:+42932948 None:intergenic
ATTGAAATTGATTTCAAAAT+CGG 0.318288 7_4:+42937587 None:intergenic
AATTCTTATGCTTCATGATC+TGG 0.328562 7_4:+42937894 None:intergenic
GCCTAATGGGTATCGGGTTC+CGG 0.340054 7_4:-42937157 Msa1155100:CDS
CCTGTCAGCAATCTTGTTGT+GGG 0.348589 7_4:+42935584 None:intergenic
TTGACTTGGTTCATTGTTCT+CGG 0.348912 7_4:-42935140 Msa1155100:CDS
ATTCAACATTACTTATTCAT+TGG 0.356578 7_4:-42932626 Msa1155100:three_prime_UTR
CCTTGGTCGCCGCCGTGTGC+TGG 0.360888 7_4:-42937400 Msa1155100:CDS
CTTCCTAATGGAAATGAGTT+TGG 0.361568 7_4:-42934806 Msa1155100:CDS
GTTTGATTCCACCGCCTAAT+GGG 0.364461 7_4:-42937170 Msa1155100:CDS
GGAGAGACATTGTCCTTTGC+CGG 0.366173 7_4:-42937208 Msa1155100:CDS
ATGTAATATTGTTGATTTGA+TGG 0.368215 7_4:-42933079 Msa1155100:CDS
ACACCACCACTGAACAATAA+AGG 0.370225 7_4:+42932831 None:intergenic
TCCATAACGTTGCGTATTGA+TGG 0.372172 7_4:+42934393 None:intergenic
TGTTTGATTCCACCGCCTAA+TGG 0.375674 7_4:-42937171 Msa1155100:CDS
GCTACTTTGTCAATTACTTC+GGG 0.378208 7_4:+42933003 None:intergenic
ATATGATCCACCTCACTTGC+AGG 0.378217 7_4:+42937288 None:intergenic
ATCTGATTAATAAGCTATTT+GGG 0.380180 7_4:+42937562 None:intergenic
ATATATTGTTCTGCTCCATC+TGG 0.387453 7_4:+42935492 None:intergenic
CGCTACTTTGTCAATTACTT+CGG 0.388361 7_4:+42933002 None:intergenic
GCAGAGAGATGAATTACTAT+AGG 0.394683 7_4:-42937230 Msa1155100:CDS
AGACCAAACTCATTTCCATT+AGG 0.395331 7_4:+42934803 None:intergenic
ATCAAAGGAGATTATGCTAT+TGG 0.396451 7_4:-42934567 Msa1155100:CDS
TCCTGTCAGCAATCTTGTTG+TGG 0.396608 7_4:+42935583 None:intergenic
TTGAATTATGTGATGATTCT+GGG 0.400181 7_4:-42934781 Msa1155100:CDS
TCCTGTTTAGCCCACCGAAC+AGG 0.405950 7_4:+42934935 None:intergenic
AATTCACTAAATATAAAGTT+GGG 0.410505 7_4:-42934420 Msa1155100:CDS
CAGAGAGATGAATTACTATA+GGG 0.412551 7_4:-42937229 Msa1155100:CDS
TCCATCAATACGCAACGTTA+TGG 0.412610 7_4:-42934394 Msa1155100:CDS
TCAAATCCAAAAGCAGGAAA+TGG 0.413279 7_4:+42935159 None:intergenic
TACATGAAAACACTGCAATC+TGG 0.414035 7_4:-42934853 Msa1155100:CDS
CTCAGAACACCTCCATTTAT+GGG 0.417404 7_4:+42935447 None:intergenic
GCAGATTCGTGTCTTCCTAA+TGG 0.418281 7_4:-42934818 Msa1155100:CDS
CCGTCTTGTGGTGGCTATTG+AGG 0.420421 7_4:-42937346 Msa1155100:CDS
TTGAGGAAGGGATGTTAAAT+GGG 0.428861 7_4:-42937329 Msa1155100:CDS
CACCACCACTGAACAATAAA+GGG 0.429403 7_4:+42932832 None:intergenic
TTGTTATGAAGTGTTGTTGT+CGG 0.430018 7_4:+42937754 None:intergenic
TGCAACTTATTTCATTGAAG+TGG 0.430659 7_4:-42935002 Msa1155100:CDS
ATAAAGAAAACATTAAGGTT+AGG 0.431045 7_4:-42932755 Msa1155100:three_prime_UTR
GGTGCGGCAGTTAGCCTCTC+TGG 0.433582 7_4:+42934528 None:intergenic
TGAAGTGTTGTTGTCGGTGG+TGG 0.434804 7_4:+42937760 None:intergenic
TGCTGACAGGAAAGGTCACC+AGG 0.435156 7_4:-42935571 Msa1155100:CDS
TTTGATTAAGGGATTGAAAA+GGG 0.439019 7_4:+42937612 None:intergenic
TTCCACCGCCTAATGGGTAT+CGG 0.445816 7_4:-42937164 Msa1155100:CDS
AAATTTACCAAGCTTGACTT+AGG 0.450311 7_4:+42934756 None:intergenic
TGGACATGAATGCATTATAT+GGG 0.450687 7_4:-42934374 Msa1155100:CDS
TGCGATTTATGTGAATCTCT+TGG 0.452077 7_4:+42935246 None:intergenic
ATCGCAGATACAATTTGCCT+TGG 0.452382 7_4:-42935229 Msa1155100:CDS
AATAGACAGTGAAATATAAC+CGG 0.452686 7_4:+42932587 None:intergenic
AGTTAGCCTCTCTGGCCACT+TGG 0.453186 7_4:+42934536 None:intergenic
CGTGTGTTGGTGCGTTTCCA+TGG 0.459289 7_4:+42937501 None:intergenic
TGCCTTGGAAAGAGGAATAC+CGG 0.462056 7_4:-42935214 Msa1155100:CDS
GAATTCACTAAATATAAAGT+TGG 0.462143 7_4:-42934421 Msa1155100:CDS
CTCAACTGACTATTCCTCCT+TGG 0.464292 7_4:+42937252 None:intergenic
AACTTACTGTAGGCTGTAAA+CGG 0.470172 7_4:+42935108 None:intergenic
CCAGCACACGGCGGCGACCA+AGG 0.472017 7_4:+42937400 None:intergenic
TTAGAGCTTCCATAAGGTCT+TGG 0.472115 7_4:+42932894 None:intergenic
GGCTAACTGCCGCACCTTCG+AGG 0.477419 7_4:-42934521 Msa1155100:CDS
TCATCTCCGGTCCTCCTGTT+CGG 0.477553 7_4:-42934949 Msa1155100:CDS
ACTGCACTTGACATGGGATG+TGG 0.486235 7_4:-42935423 Msa1155100:CDS
TTATTGGTGTCTATCATGAT+TGG 0.487456 7_4:-42934254 Msa1155100:intron
CTCCGGTCCTCCTGTTCGGT+GGG 0.487962 7_4:-42934945 Msa1155100:CDS
AGGTCCCCTCTCCTGAAAAC+CGG 0.489154 7_4:-42934501 Msa1155100:CDS
AAAAGAATGGTCAGATCTCC+AGG 0.491502 7_4:-42934912 Msa1155100:CDS
TCTCCGGTCCTCCTGTTCGG+TGG 0.493729 7_4:-42934946 Msa1155100:CDS
AAACAAACCGCAGTCTCCTC+CGG 0.498274 7_4:+42937189 None:intergenic
ATACAATTTGCCTTGGAAAG+AGG 0.505244 7_4:-42935222 Msa1155100:CDS
ACAAGGCCTTTGCCACAGCC+TGG 0.506176 7_4:+42934894 None:intergenic
CTTATAAAAGATCCAGCTAC+TGG 0.507119 7_4:-42933710 Msa1155100:CDS
TGGAAACATCGTACCACCAC+CGG 0.508503 7_4:+42935512 None:intergenic
TCCACCGCCTAATGGGTATC+GGG 0.510810 7_4:-42937163 Msa1155100:CDS
CTTCTCGTTTCATCCACCCC+TGG 0.511990 7_4:+42935553 None:intergenic
CTTGTGGTGGCTATTGAGGA+AGG 0.519378 7_4:-42937342 Msa1155100:CDS
ACAAGACGGTTGCGCTGTTG+TGG 0.521805 7_4:+42937360 None:intergenic
CTGTCAGCAATCTTGTTGTG+GGG 0.522422 7_4:+42935585 None:intergenic
GTTAGCCTCTCTGGCCACTT+GGG 0.524844 7_4:+42934537 None:intergenic
ACCAAGTCAAATCCAAAAGC+AGG 0.525653 7_4:+42935153 None:intergenic
AACGCACCAACACACGTCAA+TGG 0.527589 7_4:-42937494 Msa1155100:CDS
AGATCTCCAGGCTGTGGCAA+AGG 0.528686 7_4:-42934900 Msa1155100:CDS
GGTATCGGGTTCCGGTGAGG+TGG 0.533757 7_4:-42937149 Msa1155100:CDS
CACTAAGCTGTGGGTACGGA+GGG 0.534730 7_4:-42934457 Msa1155100:CDS
CAGCACACGGCGGCGACCAA+GGG 0.536436 7_4:+42937401 None:intergenic
GCGGCCGGAGGGAACTGTTG+TGG 0.538147 7_4:-42933037 Msa1155100:CDS
CACTTTATATTCCCCGGTGG+TGG 0.538896 7_4:-42935525 Msa1155100:CDS
GTTAAATGGGAAGAGTATTG+AGG 0.539727 7_4:-42937316 Msa1155100:CDS
GGAAGACACGAATCTGCTGC+TGG 0.540770 7_4:+42934824 None:intergenic
TCTGAGGACTGCACTTGACA+TGG 0.541511 7_4:-42935430 Msa1155100:CDS
CCAAGCATAGCAACAAAAGC+CGG 0.542023 7_4:+42935195 None:intergenic
ACCGCAGTCTCCTCCGGCAA+AGG 0.543088 7_4:+42937195 None:intergenic
AACCGGTGTTGATGTATATG+AGG 0.547717 7_4:-42934484 Msa1155100:CDS
CTGGGGACCTAAGTCAAGCT+TGG 0.550202 7_4:-42934763 Msa1155100:intron
AAATTCCCTTTATTGTTCAG+TGG 0.552777 7_4:-42932837 Msa1155100:three_prime_UTR
ATATGCCGTGTGAGGATCCA+AGG 0.554219 7_4:-42937269 Msa1155100:CDS
TAATATTGTTGATTTGATGG+TGG 0.554493 7_4:-42933076 Msa1155100:CDS
AGCCGGTATTCCTCTTTCCA+AGG 0.555587 7_4:+42935212 None:intergenic
TTCCCTTTATTGTTCAGTGG+TGG 0.555845 7_4:-42932834 Msa1155100:three_prime_UTR
TGTTGGTGCGTTTCCATGGT+GGG 0.555874 7_4:+42937505 None:intergenic
CTTGATGCGATCTTTGACAG+AGG 0.556268 7_4:-42934279 Msa1155100:CDS
GGTGGATATCTAGTCATCTC+CGG 0.556504 7_4:-42934962 Msa1155100:CDS
TCCTTTGCCGGAGGAGACTG+CGG 0.558889 7_4:-42937196 Msa1155100:CDS
ACAGGAAAGGTCACCAGGGG+TGG 0.559143 7_4:-42935566 Msa1155100:CDS
CTGCACTTGACATGGGATGT+GGG 0.561100 7_4:-42935422 Msa1155100:CDS
CTAAATTACACCGTTGTCAG+TGG 0.561302 7_4:+42932863 None:intergenic
GGTCAACACTTTATATTCCC+CGG 0.564775 7_4:-42935531 Msa1155100:CDS
AGCCCACCGAACAGGAGGAC+CGG 0.567603 7_4:+42934943 None:intergenic
GGTTCTTTATCATAAATGGT+CGG 0.570849 7_4:+42932952 None:intergenic
ATGCTTTCAGGCCACCTCAC+CGG 0.571571 7_4:+42937138 None:intergenic
TGAGAGTTAGAGCTTCCATA+AGG 0.571739 7_4:+42932888 None:intergenic
GTGATTCAATGCTGGCCACA+TGG 0.572073 7_4:+42933732 None:intergenic
GGACATGAATGCATTATATG+GGG 0.573009 7_4:-42934373 Msa1155100:CDS
GTGGATAGATTACTTCGCCC+TGG 0.574350 7_4:-42934983 Msa1155100:CDS
ACCGGAACCCGATACCCATT+AGG 0.575177 7_4:+42937156 None:intergenic
GGAAACATCGTACCACCACC+GGG 0.575600 7_4:+42935513 None:intergenic
ACCCGATACCCATTAGGCGG+TGG 0.581597 7_4:+42937162 None:intergenic
CCTTAAAATCTGATCCTGTG+TGG 0.585740 7_4:-42934338 Msa1155100:CDS
ATGGTCAGATCTCCAGGCTG+TGG 0.585744 7_4:-42934906 Msa1155100:CDS
GAGAGGGGACCTCGAAGGTG+CGG 0.587301 7_4:+42934512 None:intergenic
TCAAAGATCGCATCAAGAGT+TGG 0.587538 7_4:+42934285 None:intergenic
TGTTGTGGATCAACGGTGGA+CGG 0.588409 7_4:+42937375 None:intergenic
TGCACTTGACATGGGATGTG+GGG 0.590574 7_4:-42935421 Msa1155100:intron
GGCTTGTCCTGCAAGTGAGG+TGG 0.591375 7_4:-42937295 Msa1155100:CDS
GTGGCCTGAAAGCATGCATA+AGG 0.591970 7_4:-42937130 Msa1155100:intron
CGGTGGACGGAGCCAGCACA+CGG 0.592440 7_4:+42937388 None:intergenic
CTGACACTAAGCTGTGGGTA+CGG 0.592971 7_4:-42934461 Msa1155100:CDS
AGTAGTACGTCGTCTATCAA+AGG 0.594144 7_4:-42934582 Msa1155100:CDS
CTTAAAATCTGATCCTGTGT+GGG 0.595912 7_4:-42934337 Msa1155100:CDS
CACACGGCGGCGACCAAGGG+TGG 0.596889 7_4:+42937404 None:intergenic
TTATGAAGTGTTGTTGTCGG+TGG 0.598307 7_4:+42937757 None:intergenic
ACAACAGCGCAACCGTCTTG+TGG 0.602780 7_4:-42937358 Msa1155100:CDS
GAATTTCTCATGCGGTGAGG+TGG 0.604415 7_4:-42932978 Msa1155100:CDS
ATGGGTATCGGGTTCCGGTG+AGG 0.605394 7_4:-42937152 Msa1155100:CDS
TTCCTCCTTGGATCCTCACA+CGG 0.605618 7_4:+42937264 None:intergenic
AACTCTCATTCCACTGACAA+CGG 0.607058 7_4:-42932873 Msa1155100:three_prime_UTR
CTGAGGACTGCACTTGACAT+GGG 0.607454 7_4:-42935429 Msa1155100:CDS
CCATAAATGGAGGTGTTCTG+AGG 0.608336 7_4:-42935446 Msa1155100:CDS
GTTGCGCTGTTGTGGATCAA+CGG 0.608776 7_4:+42937368 None:intergenic
TTCAGGAGAGGGGACCTCGA+AGG 0.611046 7_4:+42934507 None:intergenic
AACAAGATTGCTGACAGGAA+AGG 0.612391 7_4:-42935579 Msa1155100:CDS
TGAGGCTTGTCCTGCAAGTG+AGG 0.612584 7_4:-42937298 Msa1155100:CDS
CGCGAATTTCTCATGCGGTG+AGG 0.618831 7_4:-42932981 Msa1155100:CDS
CCCACAACAAGATTGCTGAC+AGG 0.621138 7_4:-42935584 Msa1155100:CDS
TTGTTTGTAAGATTCTGTGA+TGG 0.622606 7_4:+42937635 None:intergenic
GGTGGTACGATGTTTCCAGA+TGG 0.623372 7_4:-42935507 Msa1155100:CDS
GGATCAGATCATAAGTTCGA+GGG 0.623475 7_4:+42933753 None:intergenic
TGGATCAGATCATAAGTTCG+AGG 0.626818 7_4:+42933752 None:intergenic
GAGACATTGTCCTTTGCCGG+AGG 0.627674 7_4:-42937205 Msa1155100:CDS
GACATGAATGCATTATATGG+GGG 0.628349 7_4:-42934372 Msa1155100:CDS
ATGAGGCTGACACTAAGCTG+TGG 0.628841 7_4:-42934467 Msa1155100:CDS
TGAATTATGTGATGATTCTG+GGG 0.629160 7_4:-42934780 Msa1155100:CDS
GAGATGACTAGATATCCACC+AGG 0.630917 7_4:+42934965 None:intergenic
ATCTCTTGGAGCAAAAGACA+TGG 0.632314 7_4:+42935260 None:intergenic
CAATTCCCAAGTGGCCAGAG+AGG 0.633346 7_4:-42934542 Msa1155100:CDS
ATTCACTAAATATAAAGTTG+GGG 0.633734 7_4:-42934419 Msa1155100:CDS
GTGTTGGTGCGTTTCCATGG+TGG 0.634028 7_4:+42937504 None:intergenic
TGTTTAGCCCACCGAACAGG+AGG 0.634614 7_4:+42934938 None:intergenic
AAGATCGCATCAAGAGTTGG+TGG 0.642391 7_4:+42934288 None:intergenic
ACACTAAGCTGTGGGTACGG+AGG 0.649184 7_4:-42934458 Msa1155100:CDS
GATAAAGAACCTGACTCACA+CGG 0.649646 7_4:-42932940 Msa1155100:CDS
CAGGGGTGGATGAAACGAGA+AGG 0.650186 7_4:-42935552 Msa1155100:CDS
TGAGGCTGACACTAAGCTGT+GGG 0.651463 7_4:-42934466 Msa1155100:CDS
ACTACATTCATCACCCACAC+AGG 0.651770 7_4:+42934324 None:intergenic
CAATACATTCCCATAAATGG+AGG 0.655075 7_4:-42935456 Msa1155100:CDS
GAGACGCCATTGACGTGTGT+TGG 0.655246 7_4:+42937488 None:intergenic
CTTACCACAACAGTTCCCTC+CGG 0.657553 7_4:+42933033 None:intergenic
ACAGCGCAACCGTCTTGTGG+TGG 0.669047 7_4:-42937355 Msa1155100:CDS
GATAGATTACTTCGCCCTGG+TGG 0.672552 7_4:-42934980 Msa1155100:CDS
CCTCAATAGCCACCACAAGA+CGG 0.672916 7_4:+42937346 None:intergenic
AGTTATCTGTTCATAACACA+AGG 0.678842 7_4:+42934877 None:intergenic
GGATGTGAGAATAATGTGAG+AGG 0.679136 7_4:+42937795 None:intergenic
TTGTGGTGGCTATTGAGGAA+GGG 0.680797 7_4:-42937341 Msa1155100:CDS
AACTTATGATCTGATCCATG+TGG 0.684133 7_4:-42933747 Msa1155100:CDS
GTCACTCAAATTTCCCACCA+TGG 0.691297 7_4:-42937518 Msa1155100:CDS
GGTGGATCATATGCCGTGTG+AGG 0.693101 7_4:-42937277 Msa1155100:CDS
AGCCTCATATACATCAACAC+CGG 0.699420 7_4:+42934482 None:intergenic
GCTGACAGGAAAGGTCACCA+GGG 0.706997 7_4:-42935570 Msa1155100:CDS
CTGACAGGAAAGGTCACCAG+GGG 0.710989 7_4:-42935569 Msa1155100:CDS
GGAACCCGATACCCATTAGG+CGG 0.712447 7_4:+42937159 None:intergenic
GCGCTGTTGTGGATCAACGG+TGG 0.717072 7_4:+42937371 None:intergenic
CAACACTTTATATTCCCCGG+TGG 0.727815 7_4:-42935528 Msa1155100:CDS
CTATTGGAACAATTCCCAAG+TGG 0.728324 7_4:-42934551 Msa1155100:CDS
TGCCGTGTGAGGATCCAAGG+AGG 0.739661 7_4:-42937266 Msa1155100:CDS
AGTAGCGCGAATTTCTCATG+CGG 0.745124 7_4:-42932986 Msa1155100:CDS
AGATGACTAGATATCCACCA+GGG 0.765962 7_4:+42934966 None:intergenic
GAAACATCGTACCACCACCG+GGG 0.777476 7_4:+42935514 None:intergenic
TGGACGGAGCCAGCACACGG+CGG 0.777606 7_4:+42937391 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGATATTAAATTGATAA+TGG - chr7_4:42933923-42933942 Msa1155100:intron 10.0%
!!! TGTATTTTTAATTTTTAATC+TGG - chr7_4:42936580-42936599 Msa1155100:intron 10.0%
!! CTTTATAAATGTAAAAAATA+TGG - chr7_4:42937176-42937195 Msa1155100:CDS 10.0%
!!! ATTGAAATTGATTTCAAAAT+CGG + chr7_4:42932914-42932933 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG - chr7_4:42934552-42934571 Msa1155100:CDS 15.0%
!! CAAATTAGTAGTATTAATTA+GGG - chr7_4:42934553-42934572 Msa1155100:CDS 15.0%
!! AAATTAGTAGTATTAATTAG+GGG - chr7_4:42934554-42934573 Msa1155100:CDS 15.0%
!!! TGATTTTAAAATAAGATATG+TGG - chr7_4:42936394-42936413 Msa1155100:intron 15.0%
!! TTCATATAAAGAAAACATTA+AGG - chr7_4:42937738-42937757 Msa1155100:five_prime_UTR 15.0%
!!! TATATTTTTTCTAAGTTTCA+TGG - chr7_4:42937825-42937844 Msa1155100:five_prime_UTR 15.0%
!!! TCTTATGCTTCATTTTTTTA+AGG + chr7_4:42932640-42932659 None:intergenic 20.0%
!! ATCTGATTAATAAGCTATTT+GGG + chr7_4:42932939-42932958 None:intergenic 20.0%
!! AAACTATAAGAGAAACTATT+AGG - chr7_4:42933703-42933722 Msa1155100:CDS 20.0%
!! AAATTTAAAAACTGTTGTGT+AGG - chr7_4:42933848-42933867 Msa1155100:intron 20.0%
!! AATTTAAAAACTGTTGTGTA+GGG - chr7_4:42933849-42933868 Msa1155100:intron 20.0%
!!! AATGAAAATTTTAATCTCCA+TGG + chr7_4:42933906-42933925 None:intergenic 20.0%
!! GAAAATACCTCTAAATTTAA+AGG + chr7_4:42934079-42934098 None:intergenic 20.0%
!!! TGGATTTTTTTTGTTTAGAA+TGG - chr7_4:42934338-42934357 Msa1155100:CDS 20.0%
!!! GGATTTTTTTTGTTTAGAAT+GGG - chr7_4:42934339-42934358 Msa1155100:CDS 20.0%
!! CATTTCTTAAGAAAATTTGT+CGG - chr7_4:42934441-42934460 Msa1155100:CDS 20.0%
!! TTTATTACACATACAAACAA+AGG + chr7_4:42934511-42934530 None:intergenic 20.0%
!! TTGAAAAGGAGTTTATATTT+AGG - chr7_4:42934614-42934633 Msa1155100:intron 20.0%
!! TGAAAAGGAGTTTATATTTA+GGG - chr7_4:42934615-42934634 Msa1155100:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - chr7_4:42934636-42934655 Msa1155100:intron 20.0%
!! ATAAGGTTTAAAAAGTAAAG+AGG + chr7_4:42935116-42935135 None:intergenic 20.0%
!!! ATTATTTTCCAGAAACATTA+GGG - chr7_4:42936307-42936326 Msa1155100:intron 20.0%
!!! TTTTAAAATAAGATATGTGG+TGG - chr7_4:42936397-42936416 Msa1155100:intron 20.0%
!!! GGCTTTACTTTTTTTTTTTT+TGG - chr7_4:42936477-42936496 Msa1155100:intron 20.0%
!!! TTTAATTTTTAATCTGGATG+CGG - chr7_4:42936586-42936605 Msa1155100:intron 20.0%
!!! TTAGTAGAGTTTTTCAATTT+AGG + chr7_4:42936956-42936975 None:intergenic 20.0%
!! TGAAATTCTACAATATTTCT+TGG - chr7_4:42937049-42937068 Msa1155100:intron 20.0%
!!! ATGTAATATTGTTGATTTGA+TGG - chr7_4:42937419-42937438 Msa1155100:CDS 20.0%
!! ATAAAGAAAACATTAAGGTT+AGG - chr7_4:42937743-42937762 Msa1155100:five_prime_UTR 20.0%
!! ATTCAACATTACTTATTCAT+TGG - chr7_4:42937872-42937891 Msa1155100:five_prime_UTR 20.0%
! TAGGAAAAAAAATGTGTAAC+TGG + chr7_4:42932827-42932846 None:intergenic 25.0%
!! TGGATATAGAATGTAGTTTT+AGG + chr7_4:42932846-42932865 None:intergenic 25.0%
! TTTGATTAAGGGATTGAAAA+GGG + chr7_4:42932889-42932908 None:intergenic 25.0%
!!! TTTTGATTAAGGGATTGAAA+AGG + chr7_4:42932890-42932909 None:intergenic 25.0%
!!! CAAAATCGGTTTTTGATTAA+GGG + chr7_4:42932900-42932919 None:intergenic 25.0%
!!! TCAAAATCGGTTTTTGATTA+AGG + chr7_4:42932901-42932920 None:intergenic 25.0%
! GATCTGATTAATAAGCTATT+TGG + chr7_4:42932940-42932959 None:intergenic 25.0%
!! GTTTCTCTTATAGTTTTTGT+AGG + chr7_4:42933699-42933718 None:intergenic 25.0%
! AGATTTAGAGATTAATGAGT+TGG - chr7_4:42933728-42933747 Msa1155100:CDS 25.0%
! ATTTAAAAACTGTTGTGTAG+GGG - chr7_4:42933850-42933869 Msa1155100:intron 25.0%
! TAACCAATTATAAAATGCCA+TGG - chr7_4:42933886-42933905 Msa1155100:intron 25.0%
! AATACCATTCTCAAAACATA+AGG - chr7_4:42933970-42933989 Msa1155100:intron 25.0%
! ACAAGTACCTTTAAATTTAG+AGG - chr7_4:42934069-42934088 Msa1155100:intron 25.0%
!!! TAAATTTAGAGGTATTTTCC+AGG - chr7_4:42934080-42934099 Msa1155100:intron 25.0%
!! TTGTCTTATTGTTGCTATTA+TGG - chr7_4:42934243-42934262 Msa1155100:intron 25.0%
! AAATGTGAAAAAAGCAAAAG+GGG + chr7_4:42934426-42934445 None:intergenic 25.0%
! GAAATGTGAAAAAAGCAAAA+GGG + chr7_4:42934427-42934446 None:intergenic 25.0%
! AGAAATGTGAAAAAAGCAAA+AGG + chr7_4:42934428-42934447 None:intergenic 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - chr7_4:42934564-42934583 Msa1155100:CDS 25.0%
!!! ATGCATCTAGTATTTTGAAA+AGG - chr7_4:42934600-42934619 Msa1155100:CDS 25.0%
! GGGACAAAAATAAAATCAAA+TGG - chr7_4:42934635-42934654 Msa1155100:intron 25.0%
! CTACAAATTGAATCCTAATT+TGG + chr7_4:42934731-42934750 None:intergenic 25.0%
! GTGCAATGAAATTAATATAG+AGG - chr7_4:42934750-42934769 Msa1155100:intron 25.0%
! GAAATTAATATAGAGGTGAT+AGG - chr7_4:42934757-42934776 Msa1155100:intron 25.0%
!! TAATATGTTTTGTGCAGATA+TGG - chr7_4:42934878-42934897 Msa1155100:CDS 25.0%
! TGAAGTAAAATGGAGTAAAA+TGG + chr7_4:42935174-42935193 None:intergenic 25.0%
!! ATTTTACTCCATTTTACTTC+AGG - chr7_4:42935173-42935192 Msa1155100:CDS 25.0%
!! CATAGTAAATTTTCTGCATA+AGG + chr7_4:42935472-42935491 None:intergenic 25.0%
! TTGAATTATGTGATGATTCT+GGG - chr7_4:42935717-42935736 Msa1155100:intron 25.0%
!! GATTATTTTCCAGAAACATT+AGG - chr7_4:42936306-42936325 Msa1155100:intron 25.0%
! TTTGCCAAGTATTAAGATAT+AGG + chr7_4:42936347-42936366 None:intergenic 25.0%
!!! ATTTTAAAATCATGTCTGCA+AGG + chr7_4:42936386-42936405 None:intergenic 25.0%
! ATATATATCATGTGAATGTG+TGG - chr7_4:42936512-42936531 Msa1155100:intron 25.0%
! TATATCCATTTGTATCGTAA+TGG - chr7_4:42936657-42936676 Msa1155100:intron 25.0%
!! TTTTATAAGTGATTCAATGC+TGG + chr7_4:42936777-42936796 None:intergenic 25.0%
! AAACATCAATGATTAAAGCA+AGG + chr7_4:42937361-42937380 None:intergenic 25.0%
! AATGAAATTGTGAAGAAATC+AGG + chr7_4:42937395-42937414 None:intergenic 25.0%
!!! TAATATTGTTGATTTGATGG+TGG - chr7_4:42937422-42937441 Msa1155100:CDS 25.0%
AATTCTTATGCTTCATGATC+TGG + chr7_4:42932607-42932626 None:intergenic 30.0%
!! TTGTTATGAAGTGTTGTTGT+CGG + chr7_4:42932747-42932766 None:intergenic 30.0%
TTGTTTGTAAGATTCTGTGA+TGG + chr7_4:42932866-42932885 None:intergenic 30.0%
GAGAAAGAGTAATGAGAAAA+AGG + chr7_4:42933055-42933074 None:intergenic 30.0%
CAGAGAGATGAATTACTATA+GGG - chr7_4:42933269-42933288 Msa1155100:intron 30.0%
!!! GTGTTAGTTTTTTGGAAAGT+TGG - chr7_4:42933395-42933414 Msa1155100:intron 30.0%
TATCTACGTAGCAATCATAT+TGG - chr7_4:42933537-42933556 Msa1155100:intron 30.0%
AAAATAGACTTAGGTGGTTT+GGG - chr7_4:42933589-42933608 Msa1155100:intron 30.0%
! TCTCCATGGCATTTTATAAT+TGG + chr7_4:42933892-42933911 None:intergenic 30.0%
!!! GTATCCTTATGTTTTGAGAA+TGG + chr7_4:42933977-42933996 None:intergenic 30.0%
ATAAGATTGATCTTCAATCC+TGG + chr7_4:42934101-42934120 None:intergenic 30.0%
TATGTTGCAGACTTCATATA+TGG - chr7_4:42934204-42934223 Msa1155100:intron 30.0%
! TATTGTTGCTATTATGGTTG+TGG - chr7_4:42934249-42934268 Msa1155100:intron 30.0%
!! TATGTTTGGGTTGTATTTAC+TGG - chr7_4:42934371-42934390 Msa1155100:CDS 30.0%
AATGTGAAAAAAGCAAAAGG+GGG + chr7_4:42934425-42934444 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG + chr7_4:42934502-42934521 None:intergenic 30.0%
TCAAATGGGTGTTTAGATAT+AGG - chr7_4:42934650-42934669 Msa1155100:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG - chr7_4:42934651-42934670 Msa1155100:intron 30.0%
AGTCAATACATTCCCATAAA+TGG - chr7_4:42935039-42935058 Msa1155100:intron 30.0%
CAGTGATCAATTCTAGTATA+AGG + chr7_4:42935133-42935152 None:intergenic 30.0%
TGCAACTTATTTCATTGAAG+TGG - chr7_4:42935496-42935515 Msa1155100:CDS 30.0%
AGTTATCTGTTCATAACACA+AGG + chr7_4:42935624-42935643 None:intergenic 30.0%
CTTGAATTATGTGATGATTC+TGG - chr7_4:42935716-42935735 Msa1155100:intron 30.0%
TGAATTATGTGATGATTCTG+GGG - chr7_4:42935718-42935737 Msa1155100:intron 30.0%
AAATTTACCAAGCTTGACTT+AGG + chr7_4:42935745-42935764 None:intergenic 30.0%
AGAGATGCAAAGATAATCAA+AGG + chr7_4:42935768-42935787 None:intergenic 30.0%
! AACTAAGATGATCATTTTGC+AGG - chr7_4:42935869-42935888 Msa1155100:intron 30.0%
ATCAAAGGAGATTATGCTAT+TGG - chr7_4:42935931-42935950 Msa1155100:intron 30.0%
ATGGACATGAATGCATTATA+TGG - chr7_4:42936123-42936142 Msa1155100:intron 30.0%
TGGACATGAATGCATTATAT+GGG - chr7_4:42936124-42936143 Msa1155100:intron 30.0%
! TTATTGGTGTCTATCATGAT+TGG - chr7_4:42936244-42936263 Msa1155100:intron 30.0%
TTCATGCATCTTCTCTTAAA+GGG - chr7_4:42936284-42936303 Msa1155100:intron 30.0%
ATGGCCTATATCTTAATACT+TGG - chr7_4:42936340-42936359 Msa1155100:intron 30.0%
! AGTTGCTTTCATGATACTTA+CGG - chr7_4:42936456-42936475 Msa1155100:intron 30.0%
TACATCCATTACGATACAAA+TGG + chr7_4:42936665-42936684 None:intergenic 30.0%
!!! TCGTAATGGATGTATTTTCT+TGG - chr7_4:42936671-42936690 Msa1155100:intron 30.0%
AATCGATAGAATAACAGCTT+AGG + chr7_4:42936870-42936889 None:intergenic 30.0%
CAAATTGTCGAGATCTATAA+AGG + chr7_4:42936925-42936944 None:intergenic 30.0%
!! TATGGTTTACTTTTGCTATG+AGG - chr7_4:42937194-42937213 Msa1155100:CDS 30.0%
TTTGACATGAATCTAATAGG+AGG + chr7_4:42937288-42937307 None:intergenic 30.0%
TGGTTTGACATGAATCTAAT+AGG + chr7_4:42937291-42937310 None:intergenic 30.0%
! TAAAATTTGCTTTAGCCTAG+AGG + chr7_4:42937330-42937349 None:intergenic 30.0%
! TGGAAATTGATCGAATTTTG+CGG - chr7_4:42937442-42937461 Msa1155100:CDS 30.0%
GGTTCTTTATCATAAATGGT+CGG + chr7_4:42937549-42937568 None:intergenic 30.0%
GTCAGGTTCTTTATCATAAA+TGG + chr7_4:42937553-42937572 None:intergenic 30.0%
AAATTCCCTTTATTGTTCAG+TGG - chr7_4:42937661-42937680 Msa1155100:five_prime_UTR 30.0%
! TGCACAAGTATTCCAATTTT+TGG + chr7_4:42937773-42937792 None:intergenic 30.0%
!! AATACTTGTGCAGTTTTATG+TGG - chr7_4:42937781-42937800 Msa1155100:five_prime_UTR 30.0%
! AATTTGAGTGACGCATTTTG+AGG + chr7_4:42932972-42932991 None:intergenic 35.0%
AGAAAAAGGCAATGGAAATG+AGG + chr7_4:42933041-42933060 None:intergenic 35.0%
GAGTAATGAGAAAAAGGCAA+TGG + chr7_4:42933049-42933068 None:intergenic 35.0%
ATTGAGGAAGGGATGTTAAA+TGG - chr7_4:42933168-42933187 Msa1155100:intron 35.0%
TTGAGGAAGGGATGTTAAAT+GGG - chr7_4:42933169-42933188 Msa1155100:intron 35.0%
!! GTTAAATGGGAAGAGTATTG+AGG - chr7_4:42933182-42933201 Msa1155100:intron 35.0%
GCAGAGAGATGAATTACTAT+AGG - chr7_4:42933268-42933287 Msa1155100:intron 35.0%
!!! AAGGTGTGGTGTTAGTTTTT+TGG - chr7_4:42933387-42933406 Msa1155100:intron 35.0%
! CATGTACTTAAAAGCGTGTT+TGG - chr7_4:42933484-42933503 Msa1155100:intron 35.0%
!! AGATGGTGGAAAATAGACTT+AGG - chr7_4:42933580-42933599 Msa1155100:intron 35.0%
GAAAATAGACTTAGGTGGTT+TGG - chr7_4:42933588-42933607 Msa1155100:intron 35.0%
! TAATGAGTTGGATGCAAATG+TGG - chr7_4:42933740-42933759 Msa1155100:CDS 35.0%
TGGTAGACATGATGCATTAT+TGG - chr7_4:42934163-42934182 Msa1155100:intron 35.0%
! CTTGTTATGTGTAACTTGGA+GGG - chr7_4:42934275-42934294 Msa1155100:CDS 35.0%
! GGAGTTATTGTGTTTTGTGA+AGG - chr7_4:42934296-42934315 Msa1155100:CDS 35.0%
! TTGTGTTTTGTGAAGGACTT+AGG - chr7_4:42934303-42934322 Msa1155100:CDS 35.0%
AGTGTGATGAAATTGAGATG+AGG - chr7_4:42934692-42934711 Msa1155100:intron 35.0%
TGAGAATGTGAAGCCAAATT+AGG - chr7_4:42934715-42934734 Msa1155100:intron 35.0%
ATATATTGTTCTGCTCCATC+TGG + chr7_4:42935009-42935028 None:intergenic 35.0%
CAATACATTCCCATAAATGG+AGG - chr7_4:42935042-42935061 Msa1155100:intron 35.0%
ACTAGCAACCTGAAGTAAAA+TGG + chr7_4:42935184-42935203 None:intergenic 35.0%
!!! TTACTTCAGGTTGCTAGTTT+TGG - chr7_4:42935186-42935205 Msa1155100:CDS 35.0%
TGCGATTTATGTGAATCTCT+TGG + chr7_4:42935255-42935274 None:intergenic 35.0%
ATACAATTTGCCTTGGAAAG+AGG - chr7_4:42935276-42935295 Msa1155100:CDS 35.0%
TCAAATCCAAAAGCAGGAAA+TGG + chr7_4:42935342-42935361 None:intergenic 35.0%
!! TTGACTTGGTTCATTGTTCT+CGG - chr7_4:42935358-42935377 Msa1155100:intron 35.0%
AACTTACTGTAGGCTGTAAA+CGG + chr7_4:42935393-42935412 None:intergenic 35.0%
TACATGAAAACACTGCAATC+TGG - chr7_4:42935645-42935664 Msa1155100:intron 35.0%
CTTCCTAATGGAAATGAGTT+TGG - chr7_4:42935692-42935711 Msa1155100:intron 35.0%
AGACCAAACTCATTTCCATT+AGG + chr7_4:42935698-42935717 None:intergenic 35.0%
GGACATGAATGCATTATATG+GGG - chr7_4:42936125-42936144 Msa1155100:intron 35.0%
GACATGAATGCATTATATGG+GGG - chr7_4:42936126-42936145 Msa1155100:intron 35.0%
CTTAAAATCTGATCCTGTGT+GGG - chr7_4:42936161-42936180 Msa1155100:intron 35.0%
ATCTTTGACAGAGGACTTAT+TGG - chr7_4:42936228-42936247 Msa1155100:intron 35.0%
GTTCATGCATCTTCTCTTAA+AGG - chr7_4:42936283-42936302 Msa1155100:intron 35.0%
ACATTAGGGTTGTGATCTTA+TGG - chr7_4:42936321-42936340 Msa1155100:intron 35.0%
ATCATGTCTGCAAGGAAAAA+TGG + chr7_4:42936378-42936397 None:intergenic 35.0%
! TTTTTAATCTGGATGCGGTT+CGG - chr7_4:42936591-42936610 Msa1155100:intron 35.0%
CTTGGAGAATCTAAGTTGTA+TGG - chr7_4:42936689-42936708 Msa1155100:intron 35.0%
AACTTATGATCTGATCCATG+TGG - chr7_4:42936751-42936770 Msa1155100:intron 35.0%
CTTATAAAAGATCCAGCTAC+TGG - chr7_4:42936788-42936807 Msa1155100:intron 35.0%
ATCCAGCTACTGGTAAAAAA+AGG - chr7_4:42936798-42936817 Msa1155100:intron 35.0%
!!! TACCTTTTTTTACCAGTAGC+TGG + chr7_4:42936803-42936822 None:intergenic 35.0%
TAATCTGATGTCACATCTCT+AGG - chr7_4:42936841-42936860 Msa1155100:intron 35.0%
! GCAAGGTATTTGATGTTCAA+TGG - chr7_4:42937259-42937278 Msa1155100:CDS 35.0%
! ATTGTGAAGAAATCAGGTTG+AGG + chr7_4:42937389-42937408 None:intergenic 35.0%
! GCTACTTTGTCAATTACTTC+GGG + chr7_4:42937498-42937517 None:intergenic 35.0%
! CGCTACTTTGTCAATTACTT+CGG + chr7_4:42937499-42937518 None:intergenic 35.0%
!!! TAGTTTTGACCAAGACCTTA+TGG - chr7_4:42937595-42937614 Msa1155100:five_prime_UTR 35.0%
AGGTTAGGATTGCCAAAAAT+TGG - chr7_4:42937758-42937777 Msa1155100:five_prime_UTR 35.0%
! TGGAAAAAAGAGTTCTGATC+CGG - chr7_4:42937892-42937911 Msa1155100:five_prime_UTR 35.0%
GGATGTGAGAATAATGTGAG+AGG + chr7_4:42932706-42932725 None:intergenic 40.0%
!!! CGGTGGTGGTTTTGTTTTTT+TGG + chr7_4:42932727-42932746 None:intergenic 40.0%
!! TTATGAAGTGTTGTTGTCGG+TGG + chr7_4:42932744-42932763 None:intergenic 40.0%
AGCACCTTGAGTAGAAAAGA+TGG - chr7_4:42933563-42933582 Msa1155100:intron 40.0%
ACCTTGAGTAGAAAAGATGG+TGG - chr7_4:42933566-42933585 Msa1155100:intron 40.0%
! TCCACCATCTTTTCTACTCA+AGG + chr7_4:42933570-42933589 None:intergenic 40.0%
TGGTGGAAAATAGACTTAGG+TGG - chr7_4:42933583-42933602 Msa1155100:intron 40.0%
GACCTGTAGATTGTGTAGTA+AGG - chr7_4:42933625-42933644 Msa1155100:intron 40.0%
CTCCTTACTACACAATCTAC+AGG + chr7_4:42933630-42933649 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr7_4:42933641-42933660 Msa1155100:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - chr7_4:42933663-42933682 Msa1155100:intron 40.0%
AGTCAAATCACTAGAGGTAG+AGG - chr7_4:42933669-42933688 Msa1155100:intron 40.0%
CGGCTACATGGATCAAATTA+CGG + chr7_4:42933785-42933804 None:intergenic 40.0%
CTTATCCCACTAATTGGAGT+CGG + chr7_4:42933805-42933824 None:intergenic 40.0%
! CAAAGCCTTATCCCACTAAT+TGG + chr7_4:42933811-42933830 None:intergenic 40.0%
TGAGGGCAAGATAGTGAAAA+TGG - chr7_4:42934143-42934162 Msa1155100:intron 40.0%
CATGATGCATTATTGGACAC+TGG - chr7_4:42934170-42934189 Msa1155100:intron 40.0%
! GTGCCTTGTTATGTGTAACT+TGG - chr7_4:42934271-42934290 Msa1155100:CDS 40.0%
CCTCCAAGTTACACATAACA+AGG + chr7_4:42934277-42934296 None:intergenic 40.0%
! CCTTGTTATGTGTAACTTGG+AGG - chr7_4:42934274-42934293 Msa1155100:CDS 40.0%
!!! GACTTAGGAGCTTGTTTTTG+TGG - chr7_4:42934318-42934337 Msa1155100:CDS 40.0%
ATGGGATAGTGCTGTATGTT+TGG - chr7_4:42934357-42934376 Msa1155100:CDS 40.0%
TGGGATAGTGCTGTATGTTT+GGG - chr7_4:42934358-42934377 Msa1155100:CDS 40.0%
GCAAAAGGGGGTTACATTAA+GGG + chr7_4:42934413-42934432 None:intergenic 40.0%
AGCAAAAGGGGGTTACATTA+AGG + chr7_4:42934414-42934433 None:intergenic 40.0%
TGGGTGTTTAGATATAGGGA+CGG - chr7_4:42934655-42934674 Msa1155100:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG - chr7_4:42934659-42934678 Msa1155100:intron 40.0%
ATATAGAGGTGATAGGCTGA+TGG - chr7_4:42934764-42934783 Msa1155100:CDS 40.0%
! TCGATTGATTCATCTGCTCT+TGG - chr7_4:42934807-42934826 Msa1155100:CDS 40.0%
AACAAGATTGCTGACAGGAA+AGG - chr7_4:42934919-42934938 Msa1155100:CDS 40.0%
GGTCAACACTTTATATTCCC+CGG - chr7_4:42934967-42934986 Msa1155100:CDS 40.0%
CTCAGAACACCTCCATTTAT+GGG + chr7_4:42935054-42935073 None:intergenic 40.0%
ATCTCTTGGAGCAAAAGACA+TGG + chr7_4:42935241-42935260 None:intergenic 40.0%
ATCGCAGATACAATTTGCCT+TGG - chr7_4:42935269-42935288 Msa1155100:CDS 40.0%
! AGACTTCCATTTCCTGCTTT+TGG - chr7_4:42935333-42935352 Msa1155100:intron 40.0%
!! TCCTGCTTTTGGATTTGACT+TGG - chr7_4:42935344-42935363 Msa1155100:intron 40.0%
ACCAAGTCAAATCCAAAAGC+AGG + chr7_4:42935348-42935367 None:intergenic 40.0%
TGCAATGCAGAACTTACTGT+AGG + chr7_4:42935403-42935422 None:intergenic 40.0%
AGATGACTAGATATCCACCA+GGG + chr7_4:42935535-42935554 None:intergenic 40.0%
GGGCTAAACAGGAAAAAGAA+TGG - chr7_4:42935573-42935592 Msa1155100:CDS 40.0%
AAAAGAATGGTCAGATCTCC+AGG - chr7_4:42935586-42935605 Msa1155100:CDS 40.0%
AGTAGTACGTCGTCTATCAA+AGG - chr7_4:42935916-42935935 Msa1155100:intron 40.0%
CTATTGGAACAATTCCCAAG+TGG - chr7_4:42935947-42935966 Msa1155100:intron 40.0%
!!! ATACATCAACACCGGTTTTC+AGG + chr7_4:42936011-42936030 None:intergenic 40.0%
!! AACCGGTGTTGATGTATATG+AGG - chr7_4:42936014-42936033 Msa1155100:intron 40.0%
AGCCTCATATACATCAACAC+CGG + chr7_4:42936019-42936038 None:intergenic 40.0%
TCCATCAATACGCAACGTTA+TGG - chr7_4:42936104-42936123 Msa1155100:intron 40.0%
TCCATAACGTTGCGTATTGA+TGG + chr7_4:42936108-42936127 None:intergenic 40.0%
! CCACACAGGATCAGATTTTA+AGG + chr7_4:42936163-42936182 None:intergenic 40.0%
CCTTAAAATCTGATCCTGTG+TGG - chr7_4:42936160-42936179 Msa1155100:intron 40.0%
TCAAAGATCGCATCAAGAGT+TGG + chr7_4:42936216-42936235 None:intergenic 40.0%
GATCACAACCCTAATGTTTC+TGG + chr7_4:42936318-42936337 None:intergenic 40.0%
!!! AGTTGTATGGTTTTGTTCCC+AGG - chr7_4:42936702-42936721 Msa1155100:intron 40.0%
GTTGAAAAAGGTTCACACCT+GGG + chr7_4:42936722-42936741 None:intergenic 40.0%
TGTTGAAAAAGGTTCACACC+TGG + chr7_4:42936723-42936742 None:intergenic 40.0%
! GTTCGAGGGTATGTTGAAAA+AGG + chr7_4:42936734-42936753 None:intergenic 40.0%
GGATCAGATCATAAGTTCGA+GGG + chr7_4:42936748-42936767 None:intergenic 40.0%
TGGATCAGATCATAAGTTCG+AGG + chr7_4:42936749-42936768 None:intergenic 40.0%
ATGTTTCAAAGAAGCAGCAC+AGG + chr7_4:42937083-42937102 None:intergenic 40.0%
GTAGAGTTTGAATCAGTGCA+AGG - chr7_4:42937242-42937261 Msa1155100:CDS 40.0%
! AATTGATCGAATTTTGCGGC+CGG - chr7_4:42937446-42937465 Msa1155100:CDS 40.0%
GATAAAGAACCTGACTCACA+CGG - chr7_4:42937558-42937577 Msa1155100:five_prime_UTR 40.0%
TTAGAGCTTCCATAAGGTCT+TGG + chr7_4:42937607-42937626 None:intergenic 40.0%
TGAGAGTTAGAGCTTCCATA+AGG + chr7_4:42937613-42937632 None:intergenic 40.0%
AACTCTCATTCCACTGACAA+CGG - chr7_4:42937625-42937644 Msa1155100:five_prime_UTR 40.0%
CTAAATTACACCGTTGTCAG+TGG + chr7_4:42937638-42937657 None:intergenic 40.0%
CACTGACAACGGTGTAATTT+AGG - chr7_4:42937636-42937655 Msa1155100:five_prime_UTR 40.0%
TTCCCTTTATTGTTCAGTGG+TGG - chr7_4:42937664-42937683 Msa1155100:five_prime_UTR 40.0%
CACCACCACTGAACAATAAA+GGG + chr7_4:42937669-42937688 None:intergenic 40.0%
ACACCACCACTGAACAATAA+AGG + chr7_4:42937670-42937689 None:intergenic 40.0%
!! ACGCATTTTGAGGAAGAAGG+TGG + chr7_4:42932962-42932981 None:intergenic 45.0%
!! GTGACGCATTTTGAGGAAGA+AGG + chr7_4:42932965-42932984 None:intergenic 45.0%
GTCACTCAAATTTCCCACCA+TGG - chr7_4:42932980-42932999 Msa1155100:CDS 45.0%
! GTTCTCTTTTACACCACCCT+TGG - chr7_4:42933081-42933100 Msa1155100:CDS 45.0%
TTGTGGTGGCTATTGAGGAA+GGG - chr7_4:42933157-42933176 Msa1155100:intron 45.0%
ATATGATCCACCTCACTTGC+AGG + chr7_4:42933213-42933232 None:intergenic 45.0%
CTCAACTGACTATTCCTCCT+TGG + chr7_4:42933249-42933268 None:intergenic 45.0%
TGTTTGATTCCACCGCCTAA+TGG - chr7_4:42933327-42933346 Msa1155100:intron 45.0%
GTTTGATTCCACCGCCTAAT+GGG - chr7_4:42933328-42933347 Msa1155100:intron 45.0%
CACACCTTATGCATGCTTTC+AGG + chr7_4:42933375-42933394 None:intergenic 45.0%
! CTGAAAGCATGCATAAGGTG+TGG - chr7_4:42933373-42933392 Msa1155100:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr7_4:42933644-42933663 Msa1155100:intron 45.0%
ACTAATTGGAGTCGGCTACA+TGG + chr7_4:42933797-42933816 None:intergenic 45.0%
! ATGTAGCCGACTCCAATTAG+TGG - chr7_4:42933796-42933815 Msa1155100:intron 45.0%
! TGTAGCCGACTCCAATTAGT+GGG - chr7_4:42933797-42933816 Msa1155100:intron 45.0%
CGACTCCAATTAGTGGGATA+AGG - chr7_4:42933803-42933822 Msa1155100:intron 45.0%
ACTGAGAAGCTACTGCAATG+AGG - chr7_4:42934125-42934144 Msa1155100:intron 45.0%
CTGAGAAGCTACTGCAATGA+GGG - chr7_4:42934126-42934145 Msa1155100:intron 45.0%
GATGCATTATTGGACACTGG+TGG - chr7_4:42934173-42934192 Msa1155100:intron 45.0%
AAGGGGGTTACATTAAGGGA+CGG + chr7_4:42934409-42934428 None:intergenic 45.0%
GTGTTTAGATATAGGGACGG+AGG - chr7_4:42934658-42934677 Msa1155100:intron 45.0%
! CTGTCAGCAATCTTGTTGTG+GGG + chr7_4:42934916-42934935 None:intergenic 45.0%
! CCTGTCAGCAATCTTGTTGT+GGG + chr7_4:42934917-42934936 None:intergenic 45.0%
TCCTGTCAGCAATCTTGTTG+TGG + chr7_4:42934918-42934937 None:intergenic 45.0%
CAACACTTTATATTCCCCGG+TGG - chr7_4:42934970-42934989 Msa1155100:CDS 45.0%
CCTCAGAACACCTCCATTTA+TGG + chr7_4:42935055-42935074 None:intergenic 45.0%
!! CCATAAATGGAGGTGTTCTG+AGG - chr7_4:42935052-42935071 Msa1155100:intron 45.0%
!!! CTTCAGGTTGCTAGTTTTGG+AGG - chr7_4:42935189-42935208 Msa1155100:CDS 45.0%
TGCCTTGGAAAGAGGAATAC+CGG - chr7_4:42935284-42935303 Msa1155100:CDS 45.0%
CCAAGCATAGCAACAAAAGC+CGG + chr7_4:42935306-42935325 None:intergenic 45.0%
GAGATGACTAGATATCCACC+AGG + chr7_4:42935536-42935555 None:intergenic 45.0%
GGTGGATATCTAGTCATCTC+CGG - chr7_4:42935536-42935555 Msa1155100:CDS 45.0%
GCAGATTCGTGTCTTCCTAA+TGG - chr7_4:42935680-42935699 Msa1155100:intron 45.0%
ACTACATTCATCACCCACAC+AGG + chr7_4:42936177-42936196 None:intergenic 45.0%
AAGATCGCATCAAGAGTTGG+TGG + chr7_4:42936213-42936232 None:intergenic 45.0%
CTTGATGCGATCTTTGACAG+AGG - chr7_4:42936219-42936238 Msa1155100:intron 45.0%
AACTTACAGCAACAGCCTCT+AGG - chr7_4:42937312-42937331 Msa1155100:CDS 45.0%
AGTAGCGCGAATTTCTCATG+CGG - chr7_4:42937512-42937531 Msa1155100:CDS 45.0%
!! TGAAGTGTTGTTGTCGGTGG+TGG + chr7_4:42932741-42932760 None:intergenic 50.0%
TGTTGGTGCGTTTCCATGGT+GGG + chr7_4:42932996-42933015 None:intergenic 50.0%
AACGCACCAACACACGTCAA+TGG - chr7_4:42933004-42933023 Msa1155100:CDS 50.0%
TGTTGTGGATCAACGGTGGA+CGG + chr7_4:42933126-42933145 None:intergenic 50.0%
GTTGCGCTGTTGTGGATCAA+CGG + chr7_4:42933133-42933152 None:intergenic 50.0%
CCTCAATAGCCACCACAAGA+CGG + chr7_4:42933155-42933174 None:intergenic 50.0%
CTTGTGGTGGCTATTGAGGA+AGG - chr7_4:42933156-42933175 Msa1155100:intron 50.0%
ATATGCCGTGTGAGGATCCA+AGG - chr7_4:42933229-42933248 Msa1155100:intron 50.0%
TTCCTCCTTGGATCCTCACA+CGG + chr7_4:42933237-42933256 None:intergenic 50.0%
GGAGAGACATTGTCCTTTGC+CGG - chr7_4:42933290-42933309 Msa1155100:intron 50.0%
AAACAAACCGCAGTCTCCTC+CGG + chr7_4:42933312-42933331 None:intergenic 50.0%
! TTCCACCGCCTAATGGGTAT+CGG - chr7_4:42933334-42933353 Msa1155100:intron 50.0%
! GTGGCCTGAAAGCATGCATA+AGG - chr7_4:42933368-42933387 Msa1155100:intron 50.0%
GGGTTACATTAAGGGACGGA+GGG + chr7_4:42934405-42934424 None:intergenic 50.0%
GAGGTGATAGGCTGATGGAA+TGG - chr7_4:42934769-42934788 Msa1155100:CDS 50.0%
CCCACAACAAGATTGCTGAC+AGG - chr7_4:42934914-42934933 Msa1155100:CDS 50.0%
CACTTTATATTCCCCGGTGG+TGG - chr7_4:42934973-42934992 Msa1155100:CDS 50.0%
TGGAAACATCGTACCACCAC+CGG + chr7_4:42934989-42935008 None:intergenic 50.0%
GGTGGTACGATGTTTCCAGA+TGG - chr7_4:42934991-42935010 Msa1155100:CDS 50.0%
TCTGAGGACTGCACTTGACA+TGG - chr7_4:42935068-42935087 Msa1155100:intron 50.0%
CTGAGGACTGCACTTGACAT+GGG - chr7_4:42935069-42935088 Msa1155100:intron 50.0%
ACTGCACTTGACATGGGATG+TGG - chr7_4:42935075-42935094 Msa1155100:intron 50.0%
CTGCACTTGACATGGGATGT+GGG - chr7_4:42935076-42935095 Msa1155100:intron 50.0%
TGCACTTGACATGGGATGTG+GGG - chr7_4:42935077-42935096 Msa1155100:intron 50.0%
AGCCGGTATTCCTCTTTCCA+AGG + chr7_4:42935289-42935308 None:intergenic 50.0%
! CCGGCTTTTGTTGCTATGCT+TGG - chr7_4:42935303-42935322 Msa1155100:CDS 50.0%
GTGGATAGATTACTTCGCCC+TGG - chr7_4:42935515-42935534 Msa1155100:CDS 50.0%
GATAGATTACTTCGCCCTGG+TGG - chr7_4:42935518-42935537 Msa1155100:CDS 50.0%
!!! AACACCGGTTTTCAGGAGAG+GGG + chr7_4:42936004-42936023 None:intergenic 50.0%
!!! CAACACCGGTTTTCAGGAGA+GGG + chr7_4:42936005-42936024 None:intergenic 50.0%
!!! TCAACACCGGTTTTCAGGAG+AGG + chr7_4:42936006-42936025 None:intergenic 50.0%
ATGAGGCTGACACTAAGCTG+TGG - chr7_4:42936031-42936050 Msa1155100:intron 50.0%
TGAGGCTGACACTAAGCTGT+GGG - chr7_4:42936032-42936051 Msa1155100:intron 50.0%
CTGACACTAAGCTGTGGGTA+CGG - chr7_4:42936037-42936056 Msa1155100:intron 50.0%
!!! AGAGTTGGTGGCTTTTGAGC+TGG + chr7_4:42936201-42936220 None:intergenic 50.0%
GTGATTCAATGCTGGCCACA+TGG + chr7_4:42936769-42936788 None:intergenic 50.0%
GAGGCTGTTGCTGTAAGTTG+TGG + chr7_4:42937311-42937330 None:intergenic 50.0%
CTTACCACAACAGTTCCCTC+CGG + chr7_4:42937468-42937487 None:intergenic 50.0%
GAATTTCTCATGCGGTGAGG+TGG - chr7_4:42937520-42937539 Msa1155100:CDS 50.0%
! TTTTCTCTGCCGTGTGAGTC+AGG + chr7_4:42937570-42937589 None:intergenic 50.0%
! GTGTTGGTGCGTTTCCATGG+TGG + chr7_4:42932997-42933016 None:intergenic 55.0%
! CGTGTGTTGGTGCGTTTCCA+TGG + chr7_4:42933000-42933019 None:intergenic 55.0%
GAGACGCCATTGACGTGTGT+TGG + chr7_4:42933013-42933032 None:intergenic 55.0%
ACAAGACGGTTGCGCTGTTG+TGG + chr7_4:42933141-42933160 None:intergenic 55.0%
ACAACAGCGCAACCGTCTTG+TGG - chr7_4:42933140-42933159 Msa1155100:intron 55.0%
CCGTCTTGTGGTGGCTATTG+AGG - chr7_4:42933152-42933171 Msa1155100:intron 55.0%
TGAGGCTTGTCCTGCAAGTG+AGG - chr7_4:42933200-42933219 Msa1155100:intron 55.0%
GGTGGATCATATGCCGTGTG+AGG - chr7_4:42933221-42933240 Msa1155100:intron 55.0%
GAGACATTGTCCTTTGCCGG+AGG - chr7_4:42933293-42933312 Msa1155100:intron 55.0%
! TCCACCGCCTAATGGGTATC+GGG - chr7_4:42933335-42933354 Msa1155100:intron 55.0%
GGAACCCGATACCCATTAGG+CGG + chr7_4:42933342-42933361 None:intergenic 55.0%
!! GCCTAATGGGTATCGGGTTC+CGG - chr7_4:42933341-42933360 Msa1155100:intron 55.0%
ACCGGAACCCGATACCCATT+AGG + chr7_4:42933345-42933364 None:intergenic 55.0%
ATGCTTTCAGGCCACCTCAC+CGG + chr7_4:42933363-42933382 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG + chr7_4:42934406-42934425 None:intergenic 55.0%
TGCTGACAGGAAAGGTCACC+AGG - chr7_4:42934927-42934946 Msa1155100:CDS 55.0%
GCTGACAGGAAAGGTCACCA+GGG - chr7_4:42934928-42934947 Msa1155100:CDS 55.0%
CTGACAGGAAAGGTCACCAG+GGG - chr7_4:42934929-42934948 Msa1155100:CDS 55.0%
CTTCTCGTTTCATCCACCCC+TGG + chr7_4:42934948-42934967 None:intergenic 55.0%
CAGGGGTGGATGAAACGAGA+AGG - chr7_4:42934946-42934965 Msa1155100:CDS 55.0%
GAAACATCGTACCACCACCG+GGG + chr7_4:42934987-42935006 None:intergenic 55.0%
GGAAACATCGTACCACCACC+GGG + chr7_4:42934988-42935007 None:intergenic 55.0%
TCATCTCCGGTCCTCCTGTT+CGG - chr7_4:42935549-42935568 Msa1155100:CDS 55.0%
TGTTTAGCCCACCGAACAGG+AGG + chr7_4:42935563-42935582 None:intergenic 55.0%
!! TCCTGTTCGGTGGGCTAAAC+AGG - chr7_4:42935562-42935581 Msa1155100:CDS 55.0%
TCCTGTTTAGCCCACCGAAC+AGG + chr7_4:42935566-42935585 None:intergenic 55.0%
ATGGTCAGATCTCCAGGCTG+TGG - chr7_4:42935592-42935611 Msa1155100:CDS 55.0%
AGATCTCCAGGCTGTGGCAA+AGG - chr7_4:42935598-42935617 Msa1155100:CDS 55.0%
GGAAGACACGAATCTGCTGC+TGG + chr7_4:42935677-42935696 None:intergenic 55.0%
CTGGGGACCTAAGTCAAGCT+TGG - chr7_4:42935735-42935754 Msa1155100:intron 55.0%
CAATTCCCAAGTGGCCAGAG+AGG - chr7_4:42935956-42935975 Msa1155100:intron 55.0%
! GTTAGCCTCTCTGGCCACTT+GGG + chr7_4:42935964-42935983 None:intergenic 55.0%
! AGTTAGCCTCTCTGGCCACT+TGG + chr7_4:42935965-42935984 None:intergenic 55.0%
AGGTCCCCTCTCCTGAAAAC+CGG - chr7_4:42935997-42936016 Msa1155100:intron 55.0%
ACACTAAGCTGTGGGTACGG+AGG - chr7_4:42936040-42936059 Msa1155100:intron 55.0%
CACTAAGCTGTGGGTACGGA+GGG - chr7_4:42936041-42936060 Msa1155100:intron 55.0%
! TGATCGAATTTTGCGGCCGG+AGG - chr7_4:42937449-42937468 Msa1155100:CDS 55.0%
! GATCGAATTTTGCGGCCGGA+GGG - chr7_4:42937450-42937469 Msa1155100:CDS 55.0%
CGCGAATTTCTCATGCGGTG+AGG - chr7_4:42937517-42937536 Msa1155100:CDS 55.0%
GCGCTGTTGTGGATCAACGG+TGG + chr7_4:42933130-42933149 None:intergenic 60.0%
ACAGCGCAACCGTCTTGTGG+TGG - chr7_4:42933143-42933162 Msa1155100:intron 60.0%
GGCTTGTCCTGCAAGTGAGG+TGG - chr7_4:42933203-42933222 Msa1155100:intron 60.0%
TGCCGTGTGAGGATCCAAGG+AGG - chr7_4:42933232-42933251 Msa1155100:intron 60.0%
TCCTTTGCCGGAGGAGACTG+CGG - chr7_4:42933302-42933321 Msa1155100:intron 60.0%
ACCCGATACCCATTAGGCGG+TGG + chr7_4:42933339-42933358 None:intergenic 60.0%
!! ATGGGTATCGGGTTCCGGTG+AGG - chr7_4:42933346-42933365 Msa1155100:intron 60.0%
ACAGGAAAGGTCACCAGGGG+TGG - chr7_4:42934932-42934951 Msa1155100:CDS 60.0%
CATGGGATGTGGGGTAAGCG+AGG - chr7_4:42935086-42935105 Msa1155100:intron 60.0%
ACAAGGCCTTTGCCACAGCC+TGG + chr7_4:42935607-42935626 None:intergenic 60.0%
TTCAGGAGAGGGGACCTCGA+AGG + chr7_4:42935994-42936013 None:intergenic 60.0%
ACCGCAGTCTCCTCCGGCAA+AGG + chr7_4:42933306-42933325 None:intergenic 65.0%
! GGTATCGGGTTCCGGTGAGG+TGG - chr7_4:42933349-42933368 Msa1155100:intron 65.0%
TCTCCGGTCCTCCTGTTCGG+TGG - chr7_4:42935552-42935571 Msa1155100:CDS 65.0%
CTCCGGTCCTCCTGTTCGGT+GGG - chr7_4:42935553-42935572 Msa1155100:CDS 65.0%
AGCCCACCGAACAGGAGGAC+CGG + chr7_4:42935558-42935577 None:intergenic 65.0%
! GGTGCGGCAGTTAGCCTCTC+TGG + chr7_4:42935973-42935992 None:intergenic 65.0%
GGCTAACTGCCGCACCTTCG+AGG - chr7_4:42935977-42935996 Msa1155100:intron 65.0%
GAGAGGGGACCTCGAAGGTG+CGG + chr7_4:42935989-42936008 None:intergenic 65.0%
CAGCACACGGCGGCGACCAA+GGG + chr7_4:42933100-42933119 None:intergenic 70.0%
TGGACGGAGCCAGCACACGG+CGG + chr7_4:42933110-42933129 None:intergenic 70.0%
CGGTGGACGGAGCCAGCACA+CGG + chr7_4:42933113-42933132 None:intergenic 70.0%
GCGGCCGGAGGGAACTGTTG+TGG - chr7_4:42937461-42937480 Msa1155100:CDS 70.0%
CACACGGCGGCGACCAAGGG+TGG + chr7_4:42933097-42933116 None:intergenic 75.0%
CCAGCACACGGCGGCGACCA+AGG + chr7_4:42933101-42933120 None:intergenic 75.0%
CCTTGGTCGCCGCCGTGTGC+TGG - chr7_4:42933098-42933117 Msa1155100:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 42932595 42937925 42932595 ID=Msa1155100;Name=Msa1155100
chr7_4 mRNA 42932595 42937925 42932595 ID=Msa1155100-mRNA-1;Parent=Msa1155100;Name=Msa1155100-mRNA-1;_AED=0.07;_eAED=0.07;_QI=381|1|1|1|1|1|7|299|589
chr7_4 exon 42932595 42933101 42932595 ID=Msa1155100-mRNA-1:exon:10680;Parent=Msa1155100-mRNA-1
chr7_4 exon 42933701 42933796 42933701 ID=Msa1155100-mRNA-1:exon:10679;Parent=Msa1155100-mRNA-1
chr7_4 exon 42934255 42934629 42934255 ID=Msa1155100-mRNA-1:exon:10678;Parent=Msa1155100-mRNA-1
chr7_4 exon 42934764 42935025 42934764 ID=Msa1155100-mRNA-1:exon:10677;Parent=Msa1155100-mRNA-1
chr7_4 exon 42935115 42935325 42935115 ID=Msa1155100-mRNA-1:exon:10676;Parent=Msa1155100-mRNA-1
chr7_4 exon 42935422 42935625 42935422 ID=Msa1155100-mRNA-1:exon:10675;Parent=Msa1155100-mRNA-1
chr7_4 exon 42937131 42937925 42937131 ID=Msa1155100-mRNA-1:exon:10674;Parent=Msa1155100-mRNA-1
chr7_4 five_prime_UTR 42937545 42937925 42937545 ID=Msa1155100-mRNA-1:five_prime_utr;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42937131 42937544 42937131 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42935422 42935625 42935422 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42935115 42935325 42935115 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42934764 42935025 42934764 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42934255 42934629 42934255 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42933701 42933796 42933701 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 CDS 42932894 42933101 42932894 ID=Msa1155100-mRNA-1:cds;Parent=Msa1155100-mRNA-1
chr7_4 three_prime_UTR 42932595 42932893 42932595 ID=Msa1155100-mRNA-1:three_prime_utr;Parent=Msa1155100-mRNA-1
Gene Sequence

>Msa1155100

ATGCGTCACTCAAATTTCCCACCATGGAAACGCACCAACACACGTCAATGGCGTCTCATCGACCTCATTTCCATTGCCTTTTTCTCATTACTCTTTCTCTTCTTTGTTCTCTTTTACACCACCCTTGGTCGCCGCCGTGTGCTGGCTCCGTCCACCGTTGATCCACAACAGCGCAACCGTCTTGTGGTGGCTATTGAGGAAGGGATGTTAAATGGGAAGAGTATTGAGGCTTGTCCTGCAAGTGAGGTGGATCATATGCCGTGTGAGGATCCAAGGAGGAATAGTCAGTTGAGCAGAGAGATGAATTACTATAGGGAGAGACATTGTCCTTTGCCGGAGGAGACTGCGGTTTGTTTGATTCCACCGCCTAATGGGTATCGGGTTCCGGTGAGGTGGCCTGAAAGCATGCATAAGATATGGCATAGCAACATGCCCCACAACAAGATTGCTGACAGGAAAGGTCACCAGGGGTGGATGAAACGAGAAGGTCAACACTTTATATTCCCCGGTGGTGGTACGATGTTTCCAGATGGAGCAGAACAATATATCAAAAAACTTAGTCAATACATTCCCATAAATGGAGGTGTTCTGAGGACTGCACTTGACATGGGATGTGGGGTTGCTAGTTTTGGAGGATATTTACTAGCTCAAGATATTTTAACCATGTCTTTTGCTCCAAGAGATTCACATAAATCGCAGATACAATTTGCCTTGGAAAGAGGAATACCGGCTTTTGTTGCTATGCTTGGCACTCAAAGACTTCCATTTCCTGCTTTTGGATTTGACTTGGTTCATTGTTCTCGGTGTTTGATACCGTTTACAGCCTACAATGCAACTTATTTCATTGAAGTGGATAGATTACTTCGCCCTGGTGGATATCTAGTCATCTCCGGTCCTCCTGTTCGGTGGGCTAAACAGGAAAAAGAATGGTCAGATCTCCAGGCTGTGGCAAAGGCCTTGTGTTATGAACAGATAACTGTACATGAAAACACTGCAATCTGGAAGAAGCCAGCAGCAGATTCGTGTCTTCCTAATGGAAATGAGTTTGGTCTTGAATTATGTGATGATTCTGGGGACCTAAGTCAAGCTTGGTACTTTAAATTGAAGAAATGTGTAAGTAGTACGTCGTCTATCAAAGGAGATTATGCTATTGGAACAATTCCCAAGTGGCCAGAGAGGCTAACTGCCGCACCTTCGAGGTCCCCTCTCCTGAAAACCGGTGTTGATGTATATGAGGCTGACACTAAGCTGTGGGTACGGAGGGTTGCACATTATAAGAATTCACTAAATATAAAGTTGGGGACTCCATCAATACGCAACGTTATGGACATGAATGCATTATATGGGGGTTTTGCAGCTGCCTTAAAATCTGATCCTGTGTGGGTGATGAATGTAGTTCCAGCTCAAAAGCCACCAACTCTTGATGCGATCTTTGACAGAGGACTTATTGGTGTCTATCATGATTGGTGTGAACCTTTTTCAACATACCCTCGAACTTATGATCTGATCCATGTGGCCAGCATTGAATCACTTATAAAAGATCCAGCTACTGGTAAAAAAAGATGTAATATTGTTGATTTGATGGTGGAAATTGATCGAATTTTGCGGCCGGAGGGAACTGTTGTGGTAAGAGATGCTCCCGAAGTAATTGACAAAGTAGCGCGAATTTCTCATGCGGTGAGGTGGAAGCCGACCATTTATGATAAAGAACCTGACTCACACGGCAGAGAAAAAATTCTAGTTTTGACCAAGACCTTATGGAAGCTCTAA
Protein sequence

>Msa1155100

MRHSNFPPWKRTNTRQWRLIDLISIAFFSLLFLFFVLFYTTLGRRRVLAPSTVDPQQRNRLVVAIEEGMLNGKSIEACPASEVDHMPCEDPRRNSQLSREMNYYRERHCPLPEETAVCLIPPPNGYRVPVRWPESMHKIWHSNMPHNKIADRKGHQGWMKREGQHFIFPGGGTMFPDGAEQYIKKLSQYIPINGGVLRTALDMGCGVASFGGYLLAQDILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTQRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVRWAKQEKEWSDLQAVAKALCYEQITVHENTAIWKKPAADSCLPNGNEFGLELCDDSGDLSQAWYFKLKKCVSSTSSIKGDYAIGTIPKWPERLTAAPSRSPLLKTGVDVYEADTKLWVRRVAHYKNSLNIKLGTPSIRNVMDMNALYGGFAAALKSDPVWVMNVVPAQKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHVASIESLIKDPATGKKRCNIVDLMVEIDRILRPEGTVVVRDAPEVIDKVARISHAVRWKPTIYDKEPDSHGREKILVLTKTLWKL*