AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235360 MtrunA17_Chr8g0344181 92.705 329 18 2 1 323 1 329 0.0 587
Msa1235360 MtrunA17_Chr8g0344191 84.262 305 47 1 1 305 33 336 0.0 526
Msa1235360 MtrunA17_Chr8g0344151 83.828 303 46 1 3 305 4 303 0.0 516
Msa1235360 MtrunA17_Chr2g0310381 42.105 285 152 5 38 315 28 306 2.98e-67 219
Msa1235360 MtrunA17_Chr2g0310391 38.907 311 176 6 12 315 3 306 3.01e-65 213
Msa1235360 MtrunA17_Chr8g0382901 43.609 266 144 2 38 303 492 751 6.17e-65 220
Msa1235360 MtrunA17_Chr8g0382901 40.146 274 137 5 33 303 23 272 7.26e-56 195
Msa1235360 MtrunA17_Chr3g0116681 37.801 291 173 4 14 302 15 299 7.20e-61 202
Msa1235360 MtrunA17_Chr7g0258221 38.870 301 173 4 10 303 6 302 2.64e-57 193
Msa1235360 MtrunA17_Chr1g0174471 36.774 310 185 5 2 303 13 319 5.58e-56 190
Msa1235360 MtrunA17_Chr3g0084921 33.444 302 183 6 12 303 12 305 5.92e-55 187
Msa1235360 MtrunA17_Chr1g0174481 36.486 296 177 4 11 303 11 298 7.64e-55 186
Msa1235360 MtrunA17_Chr3g0086691 35.443 316 188 7 11 314 4 315 1.06e-53 184
Msa1235360 MtrunA17_Chr1g0174421 33.887 301 186 6 8 303 20 312 1.72e-53 178
Msa1235360 MtrunA17_Chr5g0430111 34.576 295 173 6 16 300 7 291 6.73e-53 179
Msa1235360 MtrunA17_Chr4g0058231 34.868 304 178 6 12 303 3 298 7.06e-53 181
Msa1235360 MtrunA17_Chr8g0390881 33.871 310 185 7 5 304 3 302 7.21e-53 181
Msa1235360 MtrunA17_Chr3g0101801 32.432 296 186 4 14 303 18 305 2.73e-52 180
Msa1235360 MtrunA17_Chr5g0430101 35.000 280 161 5 16 285 6 274 2.97e-52 179
Msa1235360 MtrunA17_Chr6g0484811 34.494 316 179 9 1 303 1 301 3.13e-52 179
Msa1235360 MtrunA17_Chr4g0058201 36.667 270 161 4 37 303 27 289 5.97e-52 178
Msa1235360 MtrunA17_Chr3g0101691 35.082 305 182 6 5 302 6 301 3.73e-51 177
Msa1235360 MtrunA17_Chr4g0047661 34.106 302 183 5 12 303 19 314 6.87e-51 176
Msa1235360 MtrunA17_Chr3g0101581 33.108 296 183 5 12 302 13 298 7.75e-51 176
Msa1235360 MtrunA17_Chr3g0101601 35.948 306 175 8 13 308 14 308 7.97e-51 176
Msa1235360 MtrunA17_Chr5g0430091 33.898 295 175 6 16 300 7 291 1.19e-50 175
Msa1235360 MtrunA17_Chr5g0430131 35.206 267 157 5 21 285 24 276 1.22e-50 175
Msa1235360 MtrunA17_Chr6g0484841 35.938 256 152 4 32 285 31 276 1.42e-50 175
Msa1235360 MtrunA17_Chr3g0101651 34.138 290 171 6 37 314 37 318 1.68e-50 175
Msa1235360 MtrunA17_Chr5g0403321 34.680 297 169 6 36 315 32 320 3.69e-50 174
Msa1235360 MtrunA17_Chr3g0094171 33.333 303 189 5 12 307 16 312 4.29e-50 174
Msa1235360 MtrunA17_Chr4g0061381 35.463 313 187 6 12 314 5 312 4.45e-50 174
Msa1235360 MtrunA17_Chr3g0101621 34.985 323 190 8 13 326 11 322 5.08e-50 173
Msa1235360 MtrunA17_Chr7g0235551 36.601 306 183 7 5 304 1 301 5.58e-50 174
Msa1235360 MtrunA17_Chr3g0101611 36.027 297 169 6 38 322 38 325 8.25e-50 173
Msa1235360 MtrunA17_Chr6g0466331 34.169 319 180 10 14 314 8 314 1.01e-49 173
Msa1235360 MtrunA17_Chr5g0403331 32.808 317 191 6 12 314 9 317 1.21e-49 172
Msa1235360 MtrunA17_Chr5g0430081 33.217 286 179 4 17 300 14 289 1.60e-49 172
Msa1235360 MtrunA17_Chr8g0361471 33.856 319 181 10 14 314 8 314 1.81e-49 172
Msa1235360 MtrunA17_Chr3g0101571 34.701 268 164 3 38 302 36 295 2.05e-49 172
Msa1235360 MtrunA17_Chr7g0254641 34.884 258 162 2 34 285 33 290 2.40e-49 172
Msa1235360 MtrunA17_Chr6g0465511 34.169 319 180 10 14 314 8 314 2.50e-49 172
Msa1235360 MtrunA17_Chr8g0372251 33.214 280 169 4 33 302 30 301 2.78e-49 172
Msa1235360 MtrunA17_Chr3g0101711 34.098 305 184 7 5 302 6 300 3.44e-49 171
Msa1235360 MtrunA17_Chr3g0101701 35.907 259 153 4 37 290 37 287 3.54e-49 171
Msa1235360 MtrunA17_Chr3g0094231 34.028 288 172 8 29 307 27 305 6.33e-49 171
Msa1235360 MtrunA17_Chr1g0174451 34.106 302 181 7 11 303 12 304 8.97e-49 170
Msa1235360 MtrunA17_Chr3g0101751 32.432 296 186 5 14 303 18 305 9.81e-49 170
Msa1235360 MtrunA17_Chr5g0430031 31.900 279 171 5 15 283 6 275 1.50e-48 170
Msa1235360 MtrunA17_Chr8g0357421 33.542 319 186 8 11 314 7 314 1.68e-48 169
Msa1235360 MtrunA17_Chr3g0086661 37.984 258 152 5 11 262 4 259 4.47e-48 169
Msa1235360 MtrunA17_Chr4g0035921 31.498 327 194 8 9 315 10 326 4.53e-48 169
Msa1235360 MtrunA17_Chr3g0086651 37.984 258 152 5 11 262 4 259 5.01e-48 168
Msa1235360 MtrunA17_Chr5g0403351 29.653 317 199 6 12 314 10 316 5.12e-48 168
Msa1235360 MtrunA17_Chr3g0101631 35.144 313 178 9 12 308 5 308 8.65e-48 167
Msa1235360 MtrunA17_Chr3g0101671 32.923 325 187 9 10 315 7 319 1.35e-47 167
Msa1235360 MtrunA17_Chr4g0052861 35.018 277 162 6 18 288 18 282 2.71e-47 166
Msa1235360 MtrunA17_Chr5g0401681 35.385 260 157 4 14 263 4 262 3.03e-47 166
Msa1235360 MtrunA17_Chr3g0101821 33.333 309 187 8 1 302 1 297 3.19e-47 166
Msa1235360 MtrunA17_Chr4g0052851 37.600 250 137 5 18 262 17 252 3.28e-47 166
Msa1235360 MtrunA17_Chr4g0058191 35.714 266 160 5 42 303 29 287 4.54e-47 165
Msa1235360 MtrunA17_Chr5g0445751 31.646 316 194 8 11 315 11 315 6.71e-47 160
Msa1235360 MtrunA17_Chr1g0174461 33.221 298 188 4 13 303 10 303 7.92e-47 165
Msa1235360 MtrunA17_Chr8g0362701 37.308 260 155 4 49 303 46 302 1.16e-46 165
Msa1235360 MtrunA17_Chr4g0047631 32.039 309 184 9 5 303 17 309 2.40e-46 164
Msa1235360 MtrunA17_Chr3g0101721 31.879 298 182 6 17 303 13 300 2.86e-46 164
Msa1235360 MtrunA17_Chr3g0116741 31.731 312 190 7 14 314 29 328 3.03e-46 164
Msa1235360 MtrunA17_Chr3g0101761 32.581 310 190 7 1 303 1 298 4.86e-46 163
Msa1235360 MtrunA17_Chr3g0101661 31.190 311 195 6 15 314 15 317 2.44e-45 161
Msa1235360 MtrunA17_Chr6g0451691 33.333 303 175 7 12 292 16 313 3.49e-45 161
Msa1235360 MtrunA17_Chr4g0047641 32.203 295 190 4 13 303 25 313 4.58e-45 160
Msa1235360 MtrunA17_Chr4g0053621 35.338 266 154 4 33 287 26 284 5.10e-45 160
Msa1235360 MtrunA17_Chr8g0357431 33.000 300 185 5 11 302 7 298 6.44e-45 160
Msa1235360 MtrunA17_Chr5g0405001 31.894 301 182 6 12 302 22 309 1.07e-44 159
Msa1235360 MtrunA17_Chr3g0101831 32.468 308 194 6 1 303 1 299 1.55e-44 159
Msa1235360 MtrunA17_Chr5g0445531 33.942 274 164 5 37 305 37 298 1.81e-44 159
Msa1235360 MtrunA17_Chr3g0101811 31.667 300 188 5 10 302 9 298 1.89e-44 159
Msa1235360 MtrunA17_Chr4g0047691 33.942 274 162 8 37 303 51 312 2.26e-44 159
Msa1235360 MtrunA17_Chr1g0162801 31.419 296 187 6 15 303 14 300 2.49e-44 158
Msa1235360 MtrunA17_Chr5g0445451 31.373 306 191 9 7 305 6 299 4.60e-44 157
Msa1235360 MtrunA17_Chr4g0057001 35.581 267 170 2 37 303 49 313 4.79e-44 158
Msa1235360 MtrunA17_Chr5g0445461 31.803 305 191 7 7 305 6 299 6.08e-44 157
Msa1235360 MtrunA17_Chr2g0304871 35.165 273 160 5 33 292 32 300 7.03e-44 157
Msa1235360 MtrunA17_Chr6g0463611 32.886 298 173 9 16 302 25 306 8.37e-44 153
Msa1235360 MtrunA17_Chr6g0451741 33.106 293 174 7 19 292 42 331 1.51e-43 157
Msa1235360 MtrunA17_Chr3g0101731 32.333 300 185 8 10 302 9 297 3.04e-43 155
Msa1235360 MtrunA17_Chr5g0446151 31.973 294 183 6 37 322 40 324 3.66e-43 155
Msa1235360 MtrunA17_Chr2g0280261 35.714 238 143 3 27 262 23 252 3.88e-43 155
Msa1235360 MtrunA17_Chr5g0401691 35.000 280 170 4 13 288 26 297 5.71e-43 155
Msa1235360 MtrunA17_Chr1g0162811 31.313 297 190 6 12 303 11 298 1.01e-42 154
Msa1235360 MtrunA17_Chr4g0011861 36.111 252 151 6 39 285 30 276 1.22e-42 149
Msa1235360 MtrunA17_Chr4g0017411 35.833 240 140 4 28 262 19 249 1.61e-42 153
Msa1235360 MtrunA17_Chr4g0011881 35.165 273 164 6 17 285 12 275 1.96e-42 153
Msa1235360 MtrunA17_Chr5g0430171 35.526 228 129 4 16 233 7 226 3.51e-42 146
Msa1235360 MtrunA17_Chr4g0052881 32.862 283 179 3 12 288 6 283 3.77e-42 152
Msa1235360 MtrunA17_Chr5g0445441 31.699 306 190 8 7 305 47 340 4.85e-42 153
Msa1235360 MtrunA17_Chr4g0024771 31.560 282 176 6 12 287 10 280 8.43e-42 151
Msa1235360 MtrunA17_Chr5g0445381 31.894 301 186 7 13 305 41 330 1.90e-41 151
Msa1235360 MtrunA17_Chr7g0255531 30.357 280 178 5 17 287 10 281 2.51e-41 150
Msa1235360 MtrunA17_Chr1g0167321 31.429 315 191 7 15 315 11 314 3.22e-41 150
Msa1235360 MtrunA17_Chr4g0011921 33.559 295 182 7 13 302 7 292 3.29e-41 150
Msa1235360 MtrunA17_Chr5g0402971 33.457 269 165 4 34 291 36 301 4.69e-41 145
Msa1235360 MtrunA17_Chr2g0296651 33.106 293 176 5 5 288 1 282 5.12e-41 149
Msa1235360 MtrunA17_Chr6g0463791 31.646 316 188 9 13 314 8 309 5.50e-41 149
Msa1235360 MtrunA17_Chr4g0030741 32.817 323 190 7 14 323 40 348 7.17e-41 146
Msa1235360 MtrunA17_Chr5g0419691 35.458 251 153 5 39 285 30 275 8.01e-41 149
Msa1235360 MtrunA17_Chr6g0463801 36.726 226 133 3 37 260 36 253 9.77e-41 149
Msa1235360 MtrunA17_Chr7g0224561 32.087 321 183 8 11 314 8 310 1.45e-40 148
Msa1235360 MtrunA17_Chr4g0011871 35.458 251 154 5 39 285 30 276 1.65e-40 148
Msa1235360 MtrunA17_Chr5g0446161 33.459 266 160 5 11 267 7 264 1.71e-40 148
Msa1235360 MtrunA17_Chr7g0224551 31.776 321 184 8 11 314 8 310 3.40e-40 147
Msa1235360 MtrunA17_Chr4g0076161 29.195 298 193 6 13 302 8 295 5.11e-40 147
Msa1235360 MtrunA17_Chr6g0451801 31.392 309 193 7 1 292 3 309 6.17e-40 143
Msa1235360 MtrunA17_Chr4g0030701 33.091 275 170 4 39 303 36 306 7.79e-40 146
Msa1235360 MtrunA17_Chr6g0472311 31.206 282 175 6 35 303 38 313 8.54e-40 146
Msa1235360 MtrunA17_Chr5g0406651 33.448 290 179 7 18 302 13 293 1.17e-39 145
Msa1235360 MtrunA17_Chr4g0008101 30.375 293 183 7 18 292 20 309 2.61e-39 145
Msa1235360 MtrunA17_Chr5g0431671 32.549 255 158 4 37 287 37 281 2.80e-39 145
Msa1235360 MtrunA17_Chr5g0431641 30.435 299 188 6 14 302 8 296 2.97e-39 144
Msa1235360 MtrunA17_Chr4g0046691 31.061 264 170 4 34 292 32 288 3.31e-39 140
Msa1235360 MtrunA17_Chr4g0058261 30.292 274 178 6 37 303 61 328 4.48e-39 144
Msa1235360 MtrunA17_Chr2g0296661 32.031 256 161 5 59 306 53 303 9.88e-39 143
Msa1235360 MtrunA17_Chr6g0451781 33.455 275 165 6 44 302 80 352 1.02e-38 144
Msa1235360 MtrunA17_Chr1g0174441 30.033 303 194 6 11 303 31 325 1.15e-38 143
Msa1235360 MtrunA17_Chr5g0445421 30.263 304 176 7 7 305 80 352 1.60e-38 143
Msa1235360 MtrunA17_Chr8g0362481 36.017 236 143 4 73 303 1 233 1.66e-38 141
Msa1235360 MtrunA17_Chr1g0156101 30.769 286 187 5 28 302 22 307 2.59e-38 142
Msa1235360 MtrunA17_Chr1g0156081 30.769 299 191 6 33 315 51 349 5.66e-38 142
Msa1235360 MtrunA17_Chr6g0451751 29.758 289 186 6 19 292 23 309 5.05e-37 139
Msa1235360 MtrunA17_Chr1g0200961 30.769 273 177 4 20 283 6 275 5.60e-37 138
Msa1235360 MtrunA17_Chr7g0258211 31.667 300 192 5 12 303 7 301 5.69e-37 139
Msa1235360 MtrunA17_Chr4g0058281 28.904 301 200 7 7 302 18 309 6.52e-37 138
Msa1235360 MtrunA17_Chr4g0011981 34.657 277 168 7 32 302 23 292 7.47e-37 138
Msa1235360 MtrunA17_Chr4g0011931 31.894 301 189 8 8 302 2 292 1.19e-36 133
Msa1235360 MtrunA17_Chr1g0160851 29.825 285 185 5 14 288 3 282 1.49e-36 137
Msa1235360 MtrunA17_Chr4g0011961 32.852 277 172 7 32 302 23 291 2.11e-36 137
Msa1235360 MtrunA17_Chr7g0218601 30.519 308 201 6 20 318 15 318 2.38e-36 137
Msa1235360 MtrunA17_Chr4g0011901 33.333 276 173 6 32 302 23 292 2.84e-36 136
Msa1235360 MtrunA17_Chr4g0046631 31.136 273 166 5 30 287 35 300 7.88e-36 135
Msa1235360 MtrunA17_Chr2g0310371 44.521 146 80 1 12 157 3 147 2.07e-35 125
Msa1235360 MtrunA17_Chr8g0339311 29.900 301 192 7 6 287 1 301 2.93e-35 134
Msa1235360 MtrunA17_Chr1g0205361 30.769 273 180 5 30 298 26 293 6.48e-35 132
Msa1235360 MtrunA17_Chr4g0020041 29.841 315 200 8 12 315 12 316 7.29e-35 132
Msa1235360 MtrunA17_Chr1g0205371 29.412 289 192 6 6 288 1 283 1.55e-34 132
Msa1235360 MtrunA17_Chr8g0339331 31.538 260 166 8 39 288 39 296 2.51e-34 131
Msa1235360 MtrunA17_Chr6g0458561 31.923 260 162 8 39 288 55 309 5.21e-34 130
Msa1235360 MtrunA17_Chr6g0466941 30.928 291 178 8 18 291 17 301 1.71e-33 129
Msa1235360 MtrunA17_Chr7g0246221 30.827 266 179 3 21 283 17 280 2.30e-33 128
Msa1235360 MtrunA17_Chr3g0082701 28.523 298 191 7 14 292 16 310 6.12e-33 127
Msa1235360 MtrunA17_Chr4g0056951 33.582 268 175 3 37 303 43 308 7.00e-33 127
Msa1235360 MtrunA17_Chr4g0039391 34.074 270 165 6 24 287 24 286 1.48e-32 126
Msa1235360 MtrunA17_Chr8g0355961 29.032 279 190 3 12 286 13 287 6.26e-32 124
Msa1235360 MtrunA17_Chr5g0445411 39.735 151 86 2 13 158 17 167 9.01e-32 117
Msa1235360 MtrunA17_Chr4g0046671 28.261 276 180 4 39 302 45 314 1.51e-31 120
Msa1235360 MtrunA17_Chr6g0466901 28.767 292 186 8 16 291 15 300 1.96e-31 123
Msa1235360 MtrunA17_Chr1g0207841 29.221 308 197 5 24 314 24 327 3.11e-31 123
Msa1235360 MtrunA17_Chr5g0431631 42.857 140 77 2 10 147 23 161 4.65e-31 114
Msa1235360 MtrunA17_Chr4g0030711 30.420 286 179 5 45 314 44 325 5.53e-31 122
Msa1235360 MtrunA17_Chr1g0213671 29.502 261 165 7 36 285 32 284 7.34e-31 122
Msa1235360 MtrunA17_Chr1g0207851 29.553 291 188 5 24 302 24 309 7.78e-31 119
Msa1235360 MtrunA17_Chr7g0265611 28.014 282 184 7 17 288 25 297 1.02e-30 121
Msa1235360 MtrunA17_Chr8g0356001 29.749 279 188 4 12 286 13 287 1.90e-30 120
Msa1235360 MtrunA17_Chr7g0246131 30.712 267 180 3 20 283 16 280 4.00e-30 119
Msa1235360 MtrunA17_Chr7g0218611 31.227 269 177 4 38 302 33 297 1.38e-29 118
Msa1235360 MtrunA17_Chr1g0164211 30.556 288 188 6 32 314 27 307 1.64e-29 117
Msa1235360 MtrunA17_Chr6g0451641 25.994 327 217 10 14 321 15 335 2.29e-29 117
Msa1235360 MtrunA17_Chr4g0039901 28.622 283 195 3 8 287 4 282 2.37e-29 117
Msa1235360 MtrunA17_Chr5g0431501 28.253 269 184 4 38 301 33 297 4.66e-29 116
Msa1235360 MtrunA17_Chr5g0431461 28.253 269 184 4 38 301 33 297 4.66e-29 116
Msa1235360 MtrunA17_Chr5g0395331 28.625 269 187 4 32 297 31 297 2.30e-28 114
Msa1235360 MtrunA17_Chr1g0197851 25.753 299 206 7 8 301 4 291 2.77e-28 114
Msa1235360 MtrunA17_Chr5g0395321 27.723 303 200 6 12 308 14 303 3.25e-28 114
Msa1235360 MtrunA17_Chr5g0431511 28.625 269 183 4 38 301 33 297 3.64e-28 114
Msa1235360 MtrunA17_Chr8g0351801 28.464 267 176 4 48 303 44 306 4.35e-28 114
Msa1235360 MtrunA17_Chr3g0101741 29.614 233 152 4 73 302 1 224 7.30e-28 112
Msa1235360 MtrunA17_Chr2g0314731 27.431 288 188 6 13 287 1 280 1.49e-27 112
Msa1235360 MtrunA17_Chr1g0197891 26.531 294 200 7 12 298 8 292 1.54e-27 112
Msa1235360 MtrunA17_Chr1g0176831 28.674 279 190 4 12 287 38 310 1.01e-26 110
Msa1235360 MtrunA17_Chr1g0197881 25.914 301 200 9 8 298 4 291 2.12e-26 108
Msa1235360 MtrunA17_Chr1g0156061 41.007 139 81 1 28 165 45 183 2.29e-26 108
Msa1235360 MtrunA17_Chr5g0395381 28.904 301 174 8 12 308 14 278 2.95e-26 108
Msa1235360 MtrunA17_Chr2g0314721 27.491 291 190 7 9 287 10 291 2.19e-25 106
Msa1235360 MtrunA17_Chr3g0117321 41.026 117 69 0 40 156 9 125 2.28e-25 98.6
Msa1235360 MtrunA17_Chr1g0197871 24.490 294 208 5 12 301 8 291 6.91e-25 104
Msa1235360 MtrunA17_Chr7g0246181 32.971 276 181 3 12 285 9 282 1.14e-24 104
Msa1235360 MtrunA17_Chr1g0200951 30.385 260 165 9 41 292 64 315 2.32e-24 103
Msa1235360 MtrunA17_Chr3g0107561 27.211 294 201 8 12 294 21 312 2.37e-24 101
Msa1235360 MtrunA17_Chr6g0451681 34.591 159 101 2 12 168 36 193 1.30e-23 100
Msa1235360 MtrunA17_Chr5g0430051 46.789 109 50 2 16 116 8 116 1.54e-23 93.6
Msa1235360 MtrunA17_Chr6g0451761 27.915 283 161 8 23 292 26 278 2.51e-23 97.4
Msa1235360 MtrunA17_Chr4g0046321 27.174 276 177 8 39 303 35 297 4.22e-23 99.8
Msa1235360 MtrunA17_Chr4g0046331 27.240 279 173 8 39 303 35 297 5.58e-23 99.4
Msa1235360 MtrunA17_Chr4g0046351 27.240 279 173 8 39 303 35 297 5.61e-23 99.4
Msa1235360 MtrunA17_Chr2g0310361 37.879 132 77 2 172 303 10 136 7.25e-23 92.8
Msa1235360 MtrunA17_Chr8g0370651 24.437 311 194 8 18 298 16 315 1.72e-21 95.1
Msa1235360 MtrunA17_Chr8g0370641 24.233 326 207 10 1 302 5 314 4.87e-21 93.6
Msa1235360 MtrunA17_Chr7g0246121 30.292 274 184 4 12 283 10 278 6.19e-21 93.2
Msa1235360 MtrunA17_Chr3g0105751 25.574 305 203 9 9 294 15 314 6.44e-21 92.4
Msa1235360 MtrunA17_Chr5g0419451 28.906 256 169 6 40 291 62 308 1.53e-20 92.0
Msa1235360 MtrunA17_Chr6g0484771 30.247 162 92 3 73 232 1 143 2.15e-20 85.9
Msa1235360 MtrunA17_Chr3g0107611 25.574 305 200 11 5 287 13 312 3.68e-20 91.3
Msa1235360 MtrunA17_Chr5g0445541 47.312 93 47 1 18 108 18 110 7.84e-20 84.3
Msa1235360 MtrunA17_Chr7g0246151 31.086 267 177 4 21 283 17 280 1.14e-19 89.7
Msa1235360 MtrunA17_Chr5g0432751 25.833 240 167 7 30 262 25 260 5.08e-19 87.8
Msa1235360 MtrunA17_Chr8g0346261 28.063 253 167 8 40 287 86 328 7.49e-18 84.3
Msa1235360 MtrunA17_Chr1g0210091 26.667 285 184 9 5 270 19 297 1.19e-17 83.6
Msa1235360 MtrunA17_Chr5g0445341 41.176 85 49 1 73 156 1 85 1.31e-17 76.6
Msa1235360 MtrunA17_Chr3g0107541 25.000 252 175 6 47 287 59 307 2.01e-16 80.1
Msa1235360 MtrunA17_Chr4g0074581 26.616 263 161 10 9 251 30 280 9.39e-15 75.1
Msa1235360 MtrunA17_Chr5g0431601 38.554 83 50 1 73 155 1 82 2.30e-14 67.8
Msa1235360 MtrunA17_Chr1g0176861 44.186 86 47 1 10 95 10 94 5.22e-14 67.0
Msa1235360 MtrunA17_Chr2g0280001 30.818 159 105 3 11 165 37 194 5.85e-14 70.1
Msa1235360 MtrunA17_Chr4g0076181 42.105 76 44 0 73 148 1 76 6.03e-14 68.9
Msa1235360 MtrunA17_Chr2g0280051 30.189 159 106 3 11 165 47 204 7.40e-14 71.2
Msa1235360 MtrunA17_Chr1g0198191 26.582 158 96 5 34 177 41 192 5.02e-13 69.7
Msa1235360 MtrunA17_Chr2g0280071 27.225 191 132 4 11 195 37 226 5.12e-13 70.1
Msa1235360 MtrunA17_Chr5g0413911 29.146 199 130 4 35 225 39 234 7.05e-13 69.3
Msa1235360 MtrunA17_Chr5g0409051 31.250 176 104 6 34 196 25 196 1.91e-11 64.7
Msa1235360 MtrunA17_Chr3g0086671 50.877 57 28 0 207 263 18 74 3.45e-11 60.5
Msa1235360 MtrunA17_Chr3g0116721 27.976 168 103 7 144 302 1 159 6.15e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235360 AT5G07990.1 38.060 268 159 3 18 285 15 275 2.81e-59 199
Msa1235360 AT5G06900.1 34.694 294 185 4 12 303 9 297 7.72e-51 176
Msa1235360 AT3G48320.1 31.010 287 181 4 18 303 15 285 8.90e-49 170
Msa1235360 AT3G48280.1 31.650 297 180 5 11 304 9 285 8.17e-48 168
Msa1235360 AT3G48310.1 32.472 271 169 3 34 303 28 285 1.68e-47 167
Msa1235360 AT3G48290.1 33.579 271 166 3 34 303 29 286 2.90e-46 164
Msa1235360 AT3G48290.2 33.704 270 165 3 34 302 29 285 6.02e-46 163
Msa1235360 AT3G48270.1 31.365 271 172 3 34 303 27 284 1.07e-45 162
Msa1235360 AT3G48300.1 32.881 295 178 5 40 327 31 312 4.07e-45 160
Msa1235360 AT3G48300.2 32.881 295 178 5 40 327 33 314 4.21e-45 160
Msa1235360 AT3G26310.1 32.143 308 180 8 5 303 6 293 1.77e-44 159
Msa1235360 AT3G26320.1 32.534 292 176 8 19 302 15 293 1.91e-43 156
Msa1235360 AT5G57260.1 31.769 277 176 5 33 303 25 294 1.99e-43 156
Msa1235360 AT3G26170.1 30.897 301 189 8 12 303 7 297 3.51e-43 155
Msa1235360 AT3G26330.1 34.397 282 162 8 30 302 26 293 6.78e-43 155
Msa1235360 AT4G13310.2 31.408 277 176 4 30 301 24 291 8.17e-43 152
Msa1235360 AT3G26300.1 31.650 297 186 7 13 303 9 294 1.10e-42 154
Msa1235360 AT4G13310.1 31.408 277 176 4 30 301 24 291 4.66e-42 152
Msa1235360 AT2G30770.1 32.721 272 166 6 35 301 30 289 5.60e-42 152
Msa1235360 AT4G31940.1 34.545 275 150 8 40 291 33 300 9.60e-42 152
Msa1235360 AT5G25120.1 32.550 298 176 9 13 303 11 290 2.25e-41 150
Msa1235360 AT5G24960.2 33.091 275 172 4 30 301 25 290 2.91e-41 148
Msa1235360 AT4G36220.1 33.480 227 143 3 45 271 47 265 7.37e-41 149
Msa1235360 AT4G37310.1 32.950 261 168 5 10 263 2 262 1.57e-40 149
Msa1235360 AT1G01280.1 33.209 268 164 7 47 305 41 302 1.70e-40 148
Msa1235360 AT1G13110.1 31.900 279 179 6 11 285 7 278 1.73e-40 148
Msa1235360 AT5G24960.1 33.091 275 172 4 30 301 25 290 2.22e-40 148
Msa1235360 AT2G30750.1 32.222 270 170 4 35 301 30 289 2.64e-40 148
Msa1235360 AT5G57220.1 33.730 252 158 4 36 285 28 272 2.71e-40 147
Msa1235360 AT3G26280.1 33.803 284 163 9 13 288 15 281 2.79e-40 148
Msa1235360 AT3G26280.2 33.803 284 163 9 13 288 32 298 2.95e-40 148
Msa1235360 AT4G37400.1 34.979 243 150 3 47 288 40 275 3.53e-40 147
Msa1235360 AT1G11610.1 32.472 271 170 5 34 301 29 289 3.66e-40 147
Msa1235360 AT1G11610.2 32.472 271 170 5 34 301 29 289 3.83e-40 147
Msa1235360 AT4G37430.1 32.258 279 173 5 19 288 9 280 4.50e-40 147
Msa1235360 AT1G13080.1 32.584 267 173 4 35 296 28 292 7.86e-40 146
Msa1235360 AT4G12300.1 31.879 298 193 5 9 303 17 307 1.16e-39 146
Msa1235360 AT4G13290.1 32.432 259 161 5 37 290 32 281 1.44e-39 145
Msa1235360 AT5G67310.1 31.849 292 164 8 33 296 37 321 2.43e-39 145
Msa1235360 AT4G31970.1 33.333 267 157 6 40 288 33 296 2.58e-39 145
Msa1235360 AT3G26290.2 32.759 290 169 9 24 303 34 307 3.25e-39 145
Msa1235360 AT3G26290.1 32.759 290 169 9 24 303 21 294 3.32e-39 145
Msa1235360 AT5G04330.1 32.707 266 169 5 39 301 33 291 3.93e-39 145
Msa1235360 AT5G44620.1 31.655 278 182 3 47 318 55 330 6.99e-39 144
Msa1235360 AT5G25180.1 31.208 298 187 8 11 302 4 289 7.18e-39 144
Msa1235360 AT3G26180.1 30.405 296 187 9 17 303 12 297 2.69e-38 142
Msa1235360 AT2G02580.1 32.886 298 179 8 13 302 9 293 4.14e-38 142
Msa1235360 AT5G25130.1 32.296 257 156 6 13 264 11 254 5.83e-38 141
Msa1235360 AT1G74550.1 30.323 310 190 7 12 314 5 295 9.43e-38 140
Msa1235360 AT2G40890.1 31.698 265 171 4 31 288 20 281 1.13e-37 140
Msa1235360 AT5G24950.1 30.224 268 175 4 37 301 31 289 1.52e-37 140
Msa1235360 AT3G53280.1 33.591 259 157 6 38 290 28 277 2.38e-37 140
Msa1235360 AT4G37410.1 32.404 287 174 7 10 288 3 277 3.06e-37 139
Msa1235360 AT4G13770.1 30.000 290 185 7 20 302 14 292 5.14e-37 139
Msa1235360 AT5G42590.1 29.110 292 194 6 13 301 9 290 1.18e-36 138
Msa1235360 AT3G26190.1 31.716 268 168 6 30 290 20 279 1.33e-36 137
Msa1235360 AT3G52970.1 31.317 281 185 4 10 285 8 285 1.86e-36 137
Msa1235360 AT4G31500.1 29.316 307 194 7 3 302 1 291 1.98e-36 137
Msa1235360 AT3G44250.1 32.061 262 158 5 38 290 28 278 6.99e-36 135
Msa1235360 AT2G24180.1 33.086 269 162 7 33 295 31 287 1.23e-35 135
Msa1235360 AT5G06905.1 29.352 293 198 4 13 303 9 294 5.34e-35 134
Msa1235360 AT4G37330.1 31.818 286 168 10 12 287 8 276 1.02e-34 132
Msa1235360 AT5G25140.1 30.605 281 175 7 11 285 4 270 1.36e-34 132
Msa1235360 AT3G26200.1 30.597 268 171 6 30 290 20 279 1.38e-34 132
Msa1235360 AT4G37370.1 30.986 284 179 7 12 288 6 279 1.64e-33 129
Msa1235360 AT4G22710.1 33.784 222 142 5 47 265 62 281 1.77e-33 129
Msa1235360 AT3G52970.2 30.169 295 184 6 10 285 8 299 3.33e-33 129
Msa1235360 AT2G45560.2 29.630 270 180 5 21 283 21 287 4.13e-33 125
Msa1235360 AT4G22690.1 33.333 222 143 5 47 265 93 312 1.11e-32 127
Msa1235360 AT5G10610.1 28.873 284 187 6 11 288 5 279 1.15e-32 127
Msa1235360 AT1G13090.1 29.502 261 161 6 35 285 25 272 1.56e-32 123
Msa1235360 AT4G37320.1 28.873 284 183 7 13 287 6 279 1.70e-32 126
Msa1235360 AT3G26270.1 30.634 284 182 7 30 305 24 300 1.95e-32 126
Msa1235360 AT5G36220.1 28.920 287 186 7 12 288 8 286 3.34e-32 125
Msa1235360 AT4G12320.1 27.640 322 216 7 12 323 21 335 4.03e-32 125
Msa1235360 AT2G45550.1 29.836 305 194 7 15 306 15 312 4.10e-32 125
Msa1235360 AT3G53300.1 32.443 262 162 8 35 289 25 278 4.60e-32 125
Msa1235360 AT4G20240.2 30.258 271 177 5 30 297 25 286 4.86e-32 124
Msa1235360 AT2G23190.1 32.155 283 169 9 15 288 56 324 8.02e-32 125
Msa1235360 AT2G45560.1 29.630 270 180 5 21 283 21 287 9.33e-32 124
Msa1235360 AT2G42250.1 28.358 268 185 3 38 303 41 303 1.20e-31 124
Msa1235360 AT3G26160.1 27.797 295 194 8 12 296 7 292 1.79e-31 124
Msa1235360 AT4G20240.1 30.258 271 177 5 30 297 25 286 3.21e-31 122
Msa1235360 AT1G13090.2 29.502 261 161 6 35 285 25 272 5.01e-31 122
Msa1235360 AT3G26210.1 30.522 249 165 4 45 290 38 281 7.93e-31 122
Msa1235360 AT4G31950.1 32.714 269 151 8 40 291 33 288 1.13e-30 121
Msa1235360 AT4G12330.1 29.204 226 155 3 47 268 55 279 3.82e-30 120
Msa1235360 AT5G10600.1 28.462 260 170 5 11 262 22 273 7.94e-30 119
Msa1235360 AT3G20940.1 28.214 280 191 5 27 302 31 304 9.22e-30 119
Msa1235360 AT2G45570.1 31.650 297 187 7 5 293 9 297 1.40e-29 118
Msa1235360 AT4G37340.1 30.662 287 177 9 12 288 6 280 1.55e-29 118
Msa1235360 AT1G33720.1 29.900 301 191 9 9 297 8 300 1.58e-29 118
Msa1235360 AT3G26150.1 26.246 301 203 8 12 303 7 297 1.67e-29 118
Msa1235360 AT1G74540.1 27.985 268 167 8 12 265 2 257 1.74e-29 118
Msa1235360 AT3G26830.1 31.923 260 162 6 15 265 4 257 1.97e-29 117
Msa1235360 AT2G45560.3 30.493 223 148 4 21 239 21 240 2.19e-29 113
Msa1235360 AT3G25180.2 28.731 268 183 5 23 285 23 287 6.19e-28 112
Msa1235360 AT3G20110.1 28.041 296 200 6 12 303 15 301 1.05e-27 113
Msa1235360 AT3G25180.1 28.731 268 183 5 23 285 23 287 1.65e-27 112
Msa1235360 AT2G23220.1 29.242 277 174 7 20 288 33 295 5.10e-27 111
Msa1235360 AT3G26220.1 28.417 278 183 7 14 284 8 276 1.07e-26 110
Msa1235360 AT4G37360.1 28.571 287 183 8 12 288 6 280 1.12e-26 110
Msa1235360 AT2G46660.1 31.373 255 155 10 37 285 69 309 1.29e-26 110
Msa1235360 AT3G28740.1 30.268 261 169 6 34 288 35 288 3.55e-26 108
Msa1235360 AT3G20950.1 27.243 301 197 8 18 303 15 308 8.41e-26 107
Msa1235360 AT2G25160.2 28.470 281 177 8 21 285 17 289 1.05e-25 107
Msa1235360 AT3G32047.1 27.413 259 176 5 49 303 53 303 2.08e-25 106
Msa1235360 AT2G25160.1 28.470 281 177 8 21 285 17 289 2.58e-25 106
Msa1235360 AT4G15360.1 25.902 305 208 6 12 303 5 304 5.34e-25 105
Msa1235360 AT3G61040.2 28.195 266 179 5 39 301 34 290 1.25e-24 103
Msa1235360 AT4G20235.1 24.585 301 183 6 13 302 6 273 2.74e-24 101
Msa1235360 AT3G61040.1 28.195 266 179 5 39 301 34 290 5.42e-24 102
Msa1235360 AT4G12310.1 28.028 289 184 5 45 318 51 330 7.40e-24 102
Msa1235360 AT3G20090.2 26.275 255 179 4 52 303 58 306 9.63e-24 102
Msa1235360 AT1G50520.1 27.757 263 177 6 47 303 52 307 1.74e-23 101
Msa1235360 AT1G13100.1 28.571 245 158 6 48 285 38 272 3.68e-23 100
Msa1235360 AT2G45580.3 29.344 259 172 5 45 295 45 300 5.58e-23 99.0
Msa1235360 AT2G45580.1 29.344 259 172 5 45 295 45 300 1.63e-22 98.6
Msa1235360 AT3G26230.1 27.899 276 183 8 18 285 7 274 2.50e-22 97.8
Msa1235360 AT3G61880.1 30.651 261 166 8 31 285 58 309 4.77e-22 97.1
Msa1235360 AT3G61880.2 30.651 261 166 8 31 285 58 309 6.36e-22 96.7
Msa1235360 AT5G09970.1 27.925 265 167 10 40 292 71 323 1.21e-21 95.9
Msa1235360 AT1G01190.1 27.692 260 171 8 9 263 50 297 5.95e-21 94.0
Msa1235360 AT1G01190.2 27.692 260 171 8 9 263 55 302 7.34e-21 93.6
Msa1235360 AT3G20120.4 28.016 257 169 5 53 303 57 303 1.01e-20 93.2
Msa1235360 AT1G58260.1 24.407 295 209 9 10 291 9 302 1.29e-20 92.8
Msa1235360 AT3G20100.1 25.670 261 184 5 47 303 50 304 1.96e-20 92.4
Msa1235360 AT2G14100.1 26.275 255 176 5 53 303 59 305 3.09e-20 91.7
Msa1235360 AT5G47990.1 28.041 296 196 6 18 302 15 304 8.27e-20 90.5
Msa1235360 AT3G20140.1 24.199 281 202 5 27 303 31 304 8.32e-20 90.5
Msa1235360 AT3G20080.2 28.617 311 184 10 30 330 37 319 1.48e-19 89.7
Msa1235360 AT3G20080.1 28.617 311 184 10 30 330 37 319 1.48e-19 89.7
Msa1235360 AT5G05260.1 26.103 272 179 7 34 290 36 300 7.25e-19 87.4
Msa1235360 AT1G79370.1 26.299 308 189 10 12 287 14 315 9.80e-19 87.4
Msa1235360 AT1G74110.1 28.409 264 173 8 40 291 65 324 1.00e-18 87.4
Msa1235360 AT3G20130.1 24.444 270 190 6 53 315 58 320 1.13e-18 87.0
Msa1235360 AT4G15330.1 24.354 271 194 6 36 302 36 299 1.61e-18 86.7
Msa1235360 AT3G26180.2 37.500 112 68 1 10 121 4 113 1.85e-18 85.5
Msa1235360 AT5G05260.2 28.455 246 157 7 34 260 36 281 2.77e-18 85.9
Msa1235360 AT1G50560.1 25.670 261 180 6 49 302 54 307 7.90e-18 84.7
Msa1235360 AT5G42580.1 26.721 247 161 4 58 302 60 288 1.06e-17 84.3
Msa1235360 AT5G35917.1 28.800 250 157 7 32 260 36 285 1.18e-17 84.0
Msa1235360 AT2G05180.1 26.014 296 203 6 18 303 15 304 1.56e-17 83.6
Msa1235360 AT1G13710.1 25.902 305 197 9 11 292 6 304 4.53e-17 82.4
Msa1235360 AT4G15350.1 26.437 261 177 8 49 302 45 297 4.85e-17 82.0
Msa1235360 AT4G39950.1 23.203 306 221 8 15 307 33 337 5.13e-17 82.0
Msa1235360 AT4G39950.2 23.203 306 221 8 15 307 73 377 5.21e-17 82.4
Msa1235360 AT3G53305.1 30.435 161 107 2 73 231 1 158 3.03e-16 79.0
Msa1235360 AT1G16400.1 24.399 291 205 7 11 287 17 306 3.26e-16 79.7
Msa1235360 AT3G20960.2 22.727 242 178 4 65 303 69 304 6.95e-16 79.0
Msa1235360 AT5G35715.1 26.201 229 156 6 73 293 1 224 1.16e-15 77.8
Msa1235360 AT2G27000.1 26.275 255 165 6 59 303 61 302 1.17e-15 78.2
Msa1235360 AT3G53290.1 26.570 207 137 6 91 290 11 209 3.88e-15 76.3
Msa1235360 AT2G22330.1 24.060 266 191 7 32 287 52 316 9.23e-15 75.5
Msa1235360 AT2G22330.2 24.060 266 191 7 32 287 75 339 1.15e-14 75.1
Msa1235360 AT5G04630.1 28.235 170 112 4 5 165 1 169 2.74e-14 73.9
Msa1235360 AT1G16410.2 28.293 205 135 6 6 199 8 211 3.07e-14 73.6
Msa1235360 AT1G16410.1 24.407 295 203 11 12 288 16 308 4.76e-14 73.2
Msa1235360 AT3G10560.1 31.343 134 86 3 37 165 45 177 2.74e-13 70.9
Msa1235360 AT3G61035.1 26.182 275 172 9 47 311 51 304 7.14e-13 68.9
Msa1235360 AT1G28430.1 22.267 247 182 5 59 302 62 301 3.63e-12 67.4
Msa1235360 AT2G12190.1 29.651 172 108 4 38 200 32 199 4.71e-12 67.0
Msa1235360 AT4G15380.1 24.016 254 153 6 65 302 70 299 1.09e-11 65.9

Find 77 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAAGCTTTGGCTATTTC+TGG 0.077723 8_2:-13323146 None:intergenic
CCTATTATGGGCCATGATTT+TGG 0.106357 8_2:-13323008 None:intergenic
TAAGAAGTTTGATTGGTTTA+TGG 0.179270 8_2:+13323631 Msa1235360:CDS
AAGATTGAGATTTCCTATTA+TGG 0.181940 8_2:-13323021 None:intergenic
AATTATTGCCACTTCCTAAT+TGG 0.202104 8_2:+13322895 Msa1235360:CDS
CTTAATGGGGTCCTCAATAT+TGG 0.210178 8_2:+13323542 Msa1235360:CDS
ATGGACCCATCATGCATTTA+TGG 0.211006 8_2:+13323090 Msa1235360:CDS
TGTTATAAGTCGCATGGTTT+TGG 0.225625 8_2:+13323439 Msa1235360:CDS
ATAGGAAATCTCAATCTTAT+TGG 0.239547 8_2:+13323026 Msa1235360:CDS
CCAAAATCATGGCCCATAAT+AGG 0.290645 8_2:+13323008 Msa1235360:CDS
TTACGAGCTTGTTGCCAATA+TGG 0.293261 8_2:-13323266 None:intergenic
TTAATGGGGTCCTCAATATT+GGG 0.313985 8_2:+13323543 Msa1235360:CDS
AACATCTTCTTAAACTCTTC+AGG 0.314482 8_2:-13323503 None:intergenic
ACAAATGACGCTGTCCTTGC+GGG 0.329831 8_2:+13323173 Msa1235360:CDS
AGATTGAGATTTCCTATTAT+GGG 0.346533 8_2:-13323020 None:intergenic
ATTATTGCCACTTCCTAATT+GGG 0.353868 8_2:+13322896 Msa1235360:CDS
TTGCCAATATGGACCGTATT+GGG 0.355477 8_2:-13323255 None:intergenic
ACAAGGGTGCGACGCCGGTT+AGG 0.367767 8_2:+13324273 Msa1235360:intron
GGAAAGCTTTGGCTATTTCT+GGG 0.373033 8_2:-13323145 None:intergenic
CCCATCATGCATTTATGGTT+CGG 0.376694 8_2:+13323095 Msa1235360:CDS
AACTAGTTAGTTTCTTCAAA+AGG 0.403214 8_2:-13324319 None:intergenic
GGTCCCAATACGGTCCATAT+TGG 0.410076 8_2:+13323252 Msa1235360:CDS
TGTGAAGAGAATGAAGGCTT+TGG 0.411518 8_2:+13323607 Msa1235360:CDS
TGCGACGCCGGTTAGGGTTA+CGG 0.413960 8_2:+13324280 Msa1235360:CDS
ACCACCACCGTAACCCTAAC+CGG 0.417449 8_2:-13324287 None:intergenic
GTGAAGAGAATGAAGGCTTT+GGG 0.421112 8_2:+13323608 Msa1235360:CDS
GGGCGGCCCAAATTCTCTGC+TGG 0.422125 8_2:+13323194 Msa1235360:CDS
TGATTATGTTGCTAAAGATA+TGG 0.441940 8_2:+13323697 Msa1235360:CDS
ACATCTTCTTAAACTCTTCA+GGG 0.443345 8_2:-13323502 None:intergenic
CTTTGGGTAAGAAGTTTGAT+TGG 0.443413 8_2:+13323624 Msa1235360:CDS
GGCTCTAAACCTGTCATTGT+AGG 0.451928 8_2:+13323116 Msa1235360:CDS
GTTGCCAATATGGACCGTAT+TGG 0.458748 8_2:-13323256 None:intergenic
ATAACTACTCCAACATTACT+TGG 0.463341 8_2:+13323231 Msa1235360:CDS
GCCGGTTAGGGTTACGGTGG+TGG 0.468143 8_2:+13324286 Msa1235360:CDS
CAAGGGTGCGACGCCGGTTA+GGG 0.473436 8_2:+13324274 Msa1235360:intron
GTGGAGACGAAGACGGCGGC+GGG 0.478346 8_2:-13322958 None:intergenic
GGGCTTGATCCTACAATGAC+AGG 0.481006 8_2:-13323125 None:intergenic
TACCACCTGGCCCAAAATCA+TGG 0.485998 8_2:+13322997 Msa1235360:CDS
CTCCCACATCAATCCCTCCA+TGG 0.486601 8_2:+13323053 Msa1235360:CDS
GGTGGAGACGAAGACGGCGG+CGG 0.507682 8_2:-13322959 None:intergenic
CAGGTGGTAGATTGTATCTA+CGG 0.511481 8_2:-13322983 None:intergenic
AACATTACTTGGTCCCAATA+CGG 0.514480 8_2:+13323242 Msa1235360:CDS
TGAAGAGTTTAAGAAGATGT+TGG 0.518059 8_2:+13323505 Msa1235360:CDS
TTGGTTTATGGAACATGTGT+TGG 0.518587 8_2:+13323643 Msa1235360:CDS
AACAAATGACGCTGTCCTTG+CGG 0.527641 8_2:+13323172 Msa1235360:CDS
GAATAAAATCCCCAATATTG+AGG 0.540420 8_2:-13323553 None:intergenic
AGAATTTGGGCCGCCCCGCA+AGG 0.543729 8_2:-13323187 None:intergenic
GCCGAACCATAAATGCATGA+TGG 0.546797 8_2:-13323096 None:intergenic
TGAGACTCAAAGTTGAAAGA+TGG 0.549640 8_2:-13323415 None:intergenic
ATTCATTTCTTAGACTTGCA+AGG 0.553866 8_2:+13323581 Msa1235360:CDS
CCGAACCATAAATGCATGAT+GGG 0.556874 8_2:-13323095 None:intergenic
CGTAGATACAATCTACCACC+TGG 0.557476 8_2:+13322984 Msa1235360:CDS
TCCCACATCAATCCCTCCAT+GGG 0.562657 8_2:+13323054 Msa1235360:CDS
AAAATGACCCAATTAGGAAG+TGG 0.562868 8_2:-13322903 None:intergenic
GTTTATGGAACATGTGTTGG+AGG 0.565313 8_2:+13323646 Msa1235360:CDS
CATGAACAAGGGTGCGACGC+CGG 0.567766 8_2:+13324268 Msa1235360:intron
GGCGGCGGGTAAAGAGAAGA+AGG 0.570026 8_2:-13322944 None:intergenic
GTAGATTGTATCTACGGCGG+TGG 0.571670 8_2:-13322977 None:intergenic
TCTCAATGTTATAAGTCGCA+TGG 0.578721 8_2:+13323433 Msa1235360:CDS
TCATGTACTCATAAGACTCA+AGG 0.586026 8_2:-13323322 None:intergenic
TAATGGGGTCCTCAATATTG+GGG 0.589856 8_2:+13323544 Msa1235360:CDS
TCAAGTTTGACTTCAAGACT+AGG 0.593248 8_2:-13323749 None:intergenic
GTATTGGGACCAAGTAATGT+TGG 0.601241 8_2:-13323240 None:intergenic
TGGAGGAGCACATTGAAAGA+AGG 0.603017 8_2:+13323663 Msa1235360:CDS
CATCTTCTTAAACTCTTCAG+GGG 0.610959 8_2:-13323501 None:intergenic
TTATGTTGCTAAAGATATGG+TGG 0.612335 8_2:+13323700 Msa1235360:CDS
AGGTTATGTGAAGAGAATGA+AGG 0.616727 8_2:+13323601 Msa1235360:CDS
AAGTCTAAGAAATGAATCCA+AGG 0.620156 8_2:-13323575 None:intergenic
GCCCATGGAGGGATTGATGT+GGG 0.636794 8_2:-13323055 None:intergenic
CAAATGACGCTGTCCTTGCG+GGG 0.640095 8_2:+13323174 Msa1235360:CDS
GTCTTGAAGTCAAACTTGAG+AGG 0.644499 8_2:+13323753 Msa1235360:CDS
GAAGTCAAACTTGAGAGGCA+CGG 0.668845 8_2:+13323758 Msa1235360:CDS
TACGGCGGTGGAGACGAAGA+CGG 0.669690 8_2:-13322965 None:intergenic
AGCCCATGGAGGGATTGATG+TGG 0.698541 8_2:-13323056 None:intergenic
GGCGGTGGAGACGAAGACGG+CGG 0.708172 8_2:-13322962 None:intergenic
GTGGTAGATTGTATCTACGG+CGG 0.717323 8_2:-13322980 None:intergenic
GACGCCGGTTAGGGTTACGG+TGG 0.745470 8_2:+13324283 Msa1235360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACATAATTAATATCAGT+AGG - chr8_2:13323863-13323882 None:intergenic 15.0%
!!! TCTATTTAAAAGTTTTAAGT+GGG + chr8_2:13323921-13323940 Msa1235360:intron 15.0%
!! GTTTACATCTAAAAAAAAAT+TGG + chr8_2:13324104-13324123 Msa1235360:intron 15.0%
!! AATACATAATTAATATCAGT+AGG - chr8_2:13323863-13323882 None:intergenic 15.0%
!!! TCTATTTAAAAGTTTTAAGT+GGG + chr8_2:13323921-13323940 Msa1235360:intron 15.0%
!! GTTTACATCTAAAAAAAAAT+TGG + chr8_2:13324104-13324123 Msa1235360:intron 15.0%
!!! AAACAAAACAATTTTGTTGA+AGG + chr8_2:13323391-13323410 Msa1235360:CDS 20.0%
!!! ATGAATTGTTTTTGCTTAAT+GGG + chr8_2:13323528-13323547 Msa1235360:CDS 20.0%
!!! CACTTAAAACTTTTAAATAG+AGG - chr8_2:13323922-13323941 None:intergenic 20.0%
!!! CTCTATTTAAAAGTTTTAAG+TGG + chr8_2:13323920-13323939 Msa1235360:intron 20.0%
!!! ATTGGGTTTTGAAAAAAAAT+GGG - chr8_2:13324139-13324158 None:intergenic 20.0%
!!! AAACAAAACAATTTTGTTGA+AGG + chr8_2:13323391-13323410 Msa1235360:CDS 20.0%
!!! ATGAATTGTTTTTGCTTAAT+GGG + chr8_2:13323528-13323547 Msa1235360:CDS 20.0%
!!! CACTTAAAACTTTTAAATAG+AGG - chr8_2:13323922-13323941 None:intergenic 20.0%
!!! CTCTATTTAAAAGTTTTAAG+TGG + chr8_2:13323920-13323939 Msa1235360:intron 20.0%
!!! ATTGGGTTTTGAAAAAAAAT+GGG - chr8_2:13324139-13324158 None:intergenic 20.0%
! GTAAAAAAAATGACCCAATT+AGG - chr8_2:13322912-13322931 None:intergenic 25.0%
! AGATTGAGATTTCCTATTAT+GGG - chr8_2:13323023-13323042 None:intergenic 25.0%
! AAGATTGAGATTTCCTATTA+TGG - chr8_2:13323024-13323043 None:intergenic 25.0%
! ATAGGAAATCTCAATCTTAT+TGG + chr8_2:13323026-13323045 Msa1235360:CDS 25.0%
!!! GATGAATTGTTTTTGCTTAA+TGG + chr8_2:13323527-13323546 Msa1235360:CDS 25.0%
!!! TGAATTGTTTTTGCTTAATG+GGG + chr8_2:13323529-13323548 Msa1235360:CDS 25.0%
!!! TAAGAAGTTTGATTGGTTTA+TGG + chr8_2:13323631-13323650 Msa1235360:CDS 25.0%
! TGATTATGTTGCTAAAGATA+TGG + chr8_2:13323697-13323716 Msa1235360:CDS 25.0%
!! TTTATCGAGTTTACGTTTTT+AGG + chr8_2:13324002-13324021 Msa1235360:intron 25.0%
!! TAAAAAAAAATTGGCCCTTT+TGG + chr8_2:13324113-13324132 Msa1235360:intron 25.0%
!!! CATTGGGTTTTGAAAAAAAA+TGG - chr8_2:13324140-13324159 None:intergenic 25.0%
! AAAAGGAAACATTTCATTTC+AGG - chr8_2:13324225-13324244 None:intergenic 25.0%
!! AACTAGTTAGTTTCTTCAAA+AGG - chr8_2:13324322-13324341 None:intergenic 25.0%
! GTAAAAAAAATGACCCAATT+AGG - chr8_2:13322912-13322931 None:intergenic 25.0%
! AGATTGAGATTTCCTATTAT+GGG - chr8_2:13323023-13323042 None:intergenic 25.0%
! AAGATTGAGATTTCCTATTA+TGG - chr8_2:13323024-13323043 None:intergenic 25.0%
! ATAGGAAATCTCAATCTTAT+TGG + chr8_2:13323026-13323045 Msa1235360:CDS 25.0%
!!! GATGAATTGTTTTTGCTTAA+TGG + chr8_2:13323527-13323546 Msa1235360:CDS 25.0%
!!! TGAATTGTTTTTGCTTAATG+GGG + chr8_2:13323529-13323548 Msa1235360:CDS 25.0%
!!! TAAGAAGTTTGATTGGTTTA+TGG + chr8_2:13323631-13323650 Msa1235360:CDS 25.0%
! TGATTATGTTGCTAAAGATA+TGG + chr8_2:13323697-13323716 Msa1235360:CDS 25.0%
!! TTTATCGAGTTTACGTTTTT+AGG + chr8_2:13324002-13324021 Msa1235360:intron 25.0%
!! TAAAAAAAAATTGGCCCTTT+TGG + chr8_2:13324113-13324132 Msa1235360:intron 25.0%
!!! CATTGGGTTTTGAAAAAAAA+TGG - chr8_2:13324140-13324159 None:intergenic 25.0%
! AAAAGGAAACATTTCATTTC+AGG - chr8_2:13324225-13324244 None:intergenic 25.0%
!! AACTAGTTAGTTTCTTCAAA+AGG - chr8_2:13324322-13324341 None:intergenic 25.0%
! AATTATTGCCACTTCCTAAT+TGG + chr8_2:13322895-13322914 Msa1235360:CDS 30.0%
! ATTATTGCCACTTCCTAATT+GGG + chr8_2:13322896-13322915 Msa1235360:CDS 30.0%
!!! ATTTGTTTTGAGGAAAGCTT+TGG - chr8_2:13323159-13323178 None:intergenic 30.0%
! TATTTTCCAGCAGAGAATTT+GGG - chr8_2:13323203-13323222 None:intergenic 30.0%
! ATATTTTCCAGCAGAGAATT+TGG - chr8_2:13323204-13323223 None:intergenic 30.0%
ATAACTACTCCAACATTACT+TGG + chr8_2:13323231-13323250 Msa1235360:CDS 30.0%
ACATCTTCTTAAACTCTTCA+GGG - chr8_2:13323505-13323524 None:intergenic 30.0%
AACATCTTCTTAAACTCTTC+AGG - chr8_2:13323506-13323525 None:intergenic 30.0%
TGAAGAGTTTAAGAAGATGT+TGG + chr8_2:13323505-13323524 Msa1235360:CDS 30.0%
GAATAAAATCCCCAATATTG+AGG - chr8_2:13323556-13323575 None:intergenic 30.0%
! ATATTGGGGATTTTATTCCT+TGG + chr8_2:13323558-13323577 Msa1235360:CDS 30.0%
AAGTCTAAGAAATGAATCCA+AGG - chr8_2:13323578-13323597 None:intergenic 30.0%
ATTCATTTCTTAGACTTGCA+AGG + chr8_2:13323581-13323600 Msa1235360:CDS 30.0%
TTATGTTGCTAAAGATATGG+TGG + chr8_2:13323700-13323719 Msa1235360:CDS 30.0%
TAATGAAGATGCTCATTTAG+AGG - chr8_2:13323895-13323914 None:intergenic 30.0%
!! AAACTCGATTTGGAAAACAT+TGG - chr8_2:13323970-13323989 None:intergenic 30.0%
AAACGTAAACTCGATAAACT+CGG - chr8_2:13324000-13324019 None:intergenic 30.0%
!! AACTCGATTTCTGGTAAAAT+CGG + chr8_2:13324052-13324071 Msa1235360:intron 30.0%
AGATGTAAACTCGTAAAACT+CGG - chr8_2:13324094-13324113 None:intergenic 30.0%
TGAAAAAAAATGGGCCAAAA+GGG - chr8_2:13324130-13324149 None:intergenic 30.0%
TTGAAAAAAAATGGGCCAAA+AGG - chr8_2:13324131-13324150 None:intergenic 30.0%
TCAGGAACATGTTACTATAA+AGG - chr8_2:13324207-13324226 None:intergenic 30.0%
TTGTTCATGATTTGAGAACT+CGG - chr8_2:13324257-13324276 None:intergenic 30.0%
AGTTCTCAAATCATGAACAA+GGG + chr8_2:13324257-13324276 Msa1235360:intron 30.0%
! AATTATTGCCACTTCCTAAT+TGG + chr8_2:13322895-13322914 Msa1235360:CDS 30.0%
! ATTATTGCCACTTCCTAATT+GGG + chr8_2:13322896-13322915 Msa1235360:CDS 30.0%
!!! ATTTGTTTTGAGGAAAGCTT+TGG - chr8_2:13323159-13323178 None:intergenic 30.0%
! TATTTTCCAGCAGAGAATTT+GGG - chr8_2:13323203-13323222 None:intergenic 30.0%
! ATATTTTCCAGCAGAGAATT+TGG - chr8_2:13323204-13323223 None:intergenic 30.0%
ATAACTACTCCAACATTACT+TGG + chr8_2:13323231-13323250 Msa1235360:CDS 30.0%
ACATCTTCTTAAACTCTTCA+GGG - chr8_2:13323505-13323524 None:intergenic 30.0%
AACATCTTCTTAAACTCTTC+AGG - chr8_2:13323506-13323525 None:intergenic 30.0%
TGAAGAGTTTAAGAAGATGT+TGG + chr8_2:13323505-13323524 Msa1235360:CDS 30.0%
GAATAAAATCCCCAATATTG+AGG - chr8_2:13323556-13323575 None:intergenic 30.0%
! ATATTGGGGATTTTATTCCT+TGG + chr8_2:13323558-13323577 Msa1235360:CDS 30.0%
AAGTCTAAGAAATGAATCCA+AGG - chr8_2:13323578-13323597 None:intergenic 30.0%
ATTCATTTCTTAGACTTGCA+AGG + chr8_2:13323581-13323600 Msa1235360:CDS 30.0%
TTATGTTGCTAAAGATATGG+TGG + chr8_2:13323700-13323719 Msa1235360:CDS 30.0%
TAATGAAGATGCTCATTTAG+AGG - chr8_2:13323895-13323914 None:intergenic 30.0%
!! AAACTCGATTTGGAAAACAT+TGG - chr8_2:13323970-13323989 None:intergenic 30.0%
AAACGTAAACTCGATAAACT+CGG - chr8_2:13324000-13324019 None:intergenic 30.0%
!! AACTCGATTTCTGGTAAAAT+CGG + chr8_2:13324052-13324071 Msa1235360:intron 30.0%
AGATGTAAACTCGTAAAACT+CGG - chr8_2:13324094-13324113 None:intergenic 30.0%
TGAAAAAAAATGGGCCAAAA+GGG - chr8_2:13324130-13324149 None:intergenic 30.0%
TTGAAAAAAAATGGGCCAAA+AGG - chr8_2:13324131-13324150 None:intergenic 30.0%
TCAGGAACATGTTACTATAA+AGG - chr8_2:13324207-13324226 None:intergenic 30.0%
TTGTTCATGATTTGAGAACT+CGG - chr8_2:13324257-13324276 None:intergenic 30.0%
AGTTCTCAAATCATGAACAA+GGG + chr8_2:13324257-13324276 Msa1235360:intron 30.0%
AAAATGACCCAATTAGGAAG+TGG - chr8_2:13322906-13322925 None:intergenic 35.0%
! CTATTATGGGCCATGATTTT+GGG - chr8_2:13323010-13323029 None:intergenic 35.0%
!!! CATATTTTTTAGTGAGCCCA+TGG - chr8_2:13323073-13323092 None:intergenic 35.0%
CATGGGCTCACTAAAAAATA+TGG + chr8_2:13323071-13323090 Msa1235360:CDS 35.0%
AACATTACTTGGTCCCAATA+CGG + chr8_2:13323242-13323261 Msa1235360:CDS 35.0%
TCATGTACTCATAAGACTCA+AGG - chr8_2:13323325-13323344 None:intergenic 35.0%
TGAGACTCAAAGTTGAAAGA+TGG - chr8_2:13323418-13323437 None:intergenic 35.0%
TCTCAATGTTATAAGTCGCA+TGG + chr8_2:13323433-13323452 Msa1235360:CDS 35.0%
! TGTTATAAGTCGCATGGTTT+TGG + chr8_2:13323439-13323458 Msa1235360:CDS 35.0%
! GTTATAAGTCGCATGGTTTT+GGG + chr8_2:13323440-13323459 Msa1235360:CDS 35.0%
!! TTATAAGTCGCATGGTTTTG+GGG + chr8_2:13323441-13323460 Msa1235360:CDS 35.0%
CATCTTCTTAAACTCTTCAG+GGG - chr8_2:13323504-13323523 None:intergenic 35.0%
TTAATGGGGTCCTCAATATT+GGG + chr8_2:13323543-13323562 Msa1235360:CDS 35.0%
AGGTTATGTGAAGAGAATGA+AGG + chr8_2:13323601-13323620 Msa1235360:CDS 35.0%
CTTTGGGTAAGAAGTTTGAT+TGG + chr8_2:13323624-13323643 Msa1235360:CDS 35.0%
TTGGTTTATGGAACATGTGT+TGG + chr8_2:13323643-13323662 Msa1235360:CDS 35.0%
! TCAAGTTTGACTTCAAGACT+AGG - chr8_2:13323752-13323771 None:intergenic 35.0%
GTTCTTGTAGAAAACGCATT+GGG - chr8_2:13324156-13324175 None:intergenic 35.0%
TGTTCTTGTAGAAAACGCAT+TGG - chr8_2:13324157-13324176 None:intergenic 35.0%
GAGTTCTCAAATCATGAACA+AGG + chr8_2:13324256-13324275 Msa1235360:intron 35.0%
AAAATGACCCAATTAGGAAG+TGG - chr8_2:13322906-13322925 None:intergenic 35.0%
! CTATTATGGGCCATGATTTT+GGG - chr8_2:13323010-13323029 None:intergenic 35.0%
!!! CATATTTTTTAGTGAGCCCA+TGG - chr8_2:13323073-13323092 None:intergenic 35.0%
CATGGGCTCACTAAAAAATA+TGG + chr8_2:13323071-13323090 Msa1235360:CDS 35.0%
AACATTACTTGGTCCCAATA+CGG + chr8_2:13323242-13323261 Msa1235360:CDS 35.0%
TCATGTACTCATAAGACTCA+AGG - chr8_2:13323325-13323344 None:intergenic 35.0%
TGAGACTCAAAGTTGAAAGA+TGG - chr8_2:13323418-13323437 None:intergenic 35.0%
TCTCAATGTTATAAGTCGCA+TGG + chr8_2:13323433-13323452 Msa1235360:CDS 35.0%
! TGTTATAAGTCGCATGGTTT+TGG + chr8_2:13323439-13323458 Msa1235360:CDS 35.0%
! GTTATAAGTCGCATGGTTTT+GGG + chr8_2:13323440-13323459 Msa1235360:CDS 35.0%
!! TTATAAGTCGCATGGTTTTG+GGG + chr8_2:13323441-13323460 Msa1235360:CDS 35.0%
CATCTTCTTAAACTCTTCAG+GGG - chr8_2:13323504-13323523 None:intergenic 35.0%
TTAATGGGGTCCTCAATATT+GGG + chr8_2:13323543-13323562 Msa1235360:CDS 35.0%
AGGTTATGTGAAGAGAATGA+AGG + chr8_2:13323601-13323620 Msa1235360:CDS 35.0%
CTTTGGGTAAGAAGTTTGAT+TGG + chr8_2:13323624-13323643 Msa1235360:CDS 35.0%
TTGGTTTATGGAACATGTGT+TGG + chr8_2:13323643-13323662 Msa1235360:CDS 35.0%
! TCAAGTTTGACTTCAAGACT+AGG - chr8_2:13323752-13323771 None:intergenic 35.0%
GTTCTTGTAGAAAACGCATT+GGG - chr8_2:13324156-13324175 None:intergenic 35.0%
TGTTCTTGTAGAAAACGCAT+TGG - chr8_2:13324157-13324176 None:intergenic 35.0%
GAGTTCTCAAATCATGAACA+AGG + chr8_2:13324256-13324275 Msa1235360:intron 35.0%
CAGGTGGTAGATTGTATCTA+CGG - chr8_2:13322986-13323005 None:intergenic 40.0%
! CCTATTATGGGCCATGATTT+TGG - chr8_2:13323011-13323030 None:intergenic 40.0%
CCAAAATCATGGCCCATAAT+AGG + chr8_2:13323008-13323027 Msa1235360:CDS 40.0%
!!! TTTTTTAGTGAGCCCATGGA+GGG - chr8_2:13323069-13323088 None:intergenic 40.0%
!!! ATTTTTTAGTGAGCCCATGG+AGG - chr8_2:13323070-13323089 None:intergenic 40.0%
ATGGACCCATCATGCATTTA+TGG + chr8_2:13323090-13323109 Msa1235360:CDS 40.0%
CCGAACCATAAATGCATGAT+GGG - chr8_2:13323098-13323117 None:intergenic 40.0%
CCCATCATGCATTTATGGTT+CGG + chr8_2:13323095-13323114 Msa1235360:CDS 40.0%
!! GGAAAGCTTTGGCTATTTCT+GGG - chr8_2:13323148-13323167 None:intergenic 40.0%
! AGGAAAGCTTTGGCTATTTC+TGG - chr8_2:13323149-13323168 None:intergenic 40.0%
GTATTGGGACCAAGTAATGT+TGG - chr8_2:13323243-13323262 None:intergenic 40.0%
TTGCCAATATGGACCGTATT+GGG - chr8_2:13323258-13323277 None:intergenic 40.0%
!! TTACGAGCTTGTTGCCAATA+TGG - chr8_2:13323269-13323288 None:intergenic 40.0%
!!! GGTTTTGGGGAAGAAGTATT+TGG + chr8_2:13323454-13323473 Msa1235360:CDS 40.0%
CTTAATGGGGTCCTCAATAT+TGG + chr8_2:13323542-13323561 Msa1235360:CDS 40.0%
TAATGGGGTCCTCAATATTG+GGG + chr8_2:13323544-13323563 Msa1235360:CDS 40.0%
TGTGAAGAGAATGAAGGCTT+TGG + chr8_2:13323607-13323626 Msa1235360:CDS 40.0%
GTGAAGAGAATGAAGGCTTT+GGG + chr8_2:13323608-13323627 Msa1235360:CDS 40.0%
GTTTATGGAACATGTGTTGG+AGG + chr8_2:13323646-13323665 Msa1235360:CDS 40.0%
GTCTTGAAGTCAAACTTGAG+AGG + chr8_2:13323753-13323772 Msa1235360:CDS 40.0%
! CGGAGTGTTAAAACTCGATT+TGG - chr8_2:13323980-13323999 None:intergenic 40.0%
! CCTCTGAGTTAACACGATTT+TGG - chr8_2:13324030-13324049 None:intergenic 40.0%
CCAAAATCGTGTTAACTCAG+AGG + chr8_2:13324027-13324046 Msa1235360:intron 40.0%
TCAGAGGTAAACTCGATTTC+TGG + chr8_2:13324043-13324062 Msa1235360:intron 40.0%
!! CGATTTCTGGTAAAATCGGA+AGG + chr8_2:13324056-13324075 Msa1235360:intron 40.0%
GAACTCGGAGAAGAAAGAAA+AGG - chr8_2:13324242-13324261 None:intergenic 40.0%
CAGGTGGTAGATTGTATCTA+CGG - chr8_2:13322986-13323005 None:intergenic 40.0%
! CCTATTATGGGCCATGATTT+TGG - chr8_2:13323011-13323030 None:intergenic 40.0%
CCAAAATCATGGCCCATAAT+AGG + chr8_2:13323008-13323027 Msa1235360:CDS 40.0%
!!! TTTTTTAGTGAGCCCATGGA+GGG - chr8_2:13323069-13323088 None:intergenic 40.0%
!!! ATTTTTTAGTGAGCCCATGG+AGG - chr8_2:13323070-13323089 None:intergenic 40.0%
ATGGACCCATCATGCATTTA+TGG + chr8_2:13323090-13323109 Msa1235360:CDS 40.0%
CCGAACCATAAATGCATGAT+GGG - chr8_2:13323098-13323117 None:intergenic 40.0%
CCCATCATGCATTTATGGTT+CGG + chr8_2:13323095-13323114 Msa1235360:CDS 40.0%
!! GGAAAGCTTTGGCTATTTCT+GGG - chr8_2:13323148-13323167 None:intergenic 40.0%
! AGGAAAGCTTTGGCTATTTC+TGG - chr8_2:13323149-13323168 None:intergenic 40.0%
GTATTGGGACCAAGTAATGT+TGG - chr8_2:13323243-13323262 None:intergenic 40.0%
TTGCCAATATGGACCGTATT+GGG - chr8_2:13323258-13323277 None:intergenic 40.0%
!! TTACGAGCTTGTTGCCAATA+TGG - chr8_2:13323269-13323288 None:intergenic 40.0%
!!! GGTTTTGGGGAAGAAGTATT+TGG + chr8_2:13323454-13323473 Msa1235360:CDS 40.0%
CTTAATGGGGTCCTCAATAT+TGG + chr8_2:13323542-13323561 Msa1235360:CDS 40.0%
TAATGGGGTCCTCAATATTG+GGG + chr8_2:13323544-13323563 Msa1235360:CDS 40.0%
TGTGAAGAGAATGAAGGCTT+TGG + chr8_2:13323607-13323626 Msa1235360:CDS 40.0%
GTGAAGAGAATGAAGGCTTT+GGG + chr8_2:13323608-13323627 Msa1235360:CDS 40.0%
GTTTATGGAACATGTGTTGG+AGG + chr8_2:13323646-13323665 Msa1235360:CDS 40.0%
GTCTTGAAGTCAAACTTGAG+AGG + chr8_2:13323753-13323772 Msa1235360:CDS 40.0%
! CGGAGTGTTAAAACTCGATT+TGG - chr8_2:13323980-13323999 None:intergenic 40.0%
! CCTCTGAGTTAACACGATTT+TGG - chr8_2:13324030-13324049 None:intergenic 40.0%
CCAAAATCGTGTTAACTCAG+AGG + chr8_2:13324027-13324046 Msa1235360:intron 40.0%
TCAGAGGTAAACTCGATTTC+TGG + chr8_2:13324043-13324062 Msa1235360:intron 40.0%
!! CGATTTCTGGTAAAATCGGA+AGG + chr8_2:13324056-13324075 Msa1235360:intron 40.0%
GAACTCGGAGAAGAAAGAAA+AGG - chr8_2:13324242-13324261 None:intergenic 40.0%
GTGGTAGATTGTATCTACGG+CGG - chr8_2:13322983-13323002 None:intergenic 45.0%
CGTAGATACAATCTACCACC+TGG + chr8_2:13322984-13323003 Msa1235360:CDS 45.0%
GCCGAACCATAAATGCATGA+TGG - chr8_2:13323099-13323118 None:intergenic 45.0%
!! GGCTCTAAACCTGTCATTGT+AGG + chr8_2:13323116-13323135 Msa1235360:CDS 45.0%
!!! GGACAGCGTCATTTGTTTTG+AGG - chr8_2:13323169-13323188 None:intergenic 45.0%
AACAAATGACGCTGTCCTTG+CGG + chr8_2:13323172-13323191 Msa1235360:CDS 45.0%
GTTGCCAATATGGACCGTAT+TGG - chr8_2:13323259-13323278 None:intergenic 45.0%
! TGGAGGAGCACATTGAAAGA+AGG + chr8_2:13323663-13323682 Msa1235360:CDS 45.0%
GAAGTCAAACTTGAGAGGCA+CGG + chr8_2:13323758-13323777 Msa1235360:CDS 45.0%
! CGGAGTCAAAGCTTTTACTC+AGG + chr8_2:13323778-13323797 Msa1235360:CDS 45.0%
GTGGTAGATTGTATCTACGG+CGG - chr8_2:13322983-13323002 None:intergenic 45.0%
CGTAGATACAATCTACCACC+TGG + chr8_2:13322984-13323003 Msa1235360:CDS 45.0%
GCCGAACCATAAATGCATGA+TGG - chr8_2:13323099-13323118 None:intergenic 45.0%
!! GGCTCTAAACCTGTCATTGT+AGG + chr8_2:13323116-13323135 Msa1235360:CDS 45.0%
!!! GGACAGCGTCATTTGTTTTG+AGG - chr8_2:13323169-13323188 None:intergenic 45.0%
AACAAATGACGCTGTCCTTG+CGG + chr8_2:13323172-13323191 Msa1235360:CDS 45.0%
GTTGCCAATATGGACCGTAT+TGG - chr8_2:13323259-13323278 None:intergenic 45.0%
! TGGAGGAGCACATTGAAAGA+AGG + chr8_2:13323663-13323682 Msa1235360:CDS 45.0%
GAAGTCAAACTTGAGAGGCA+CGG + chr8_2:13323758-13323777 Msa1235360:CDS 45.0%
! CGGAGTCAAAGCTTTTACTC+AGG + chr8_2:13323778-13323797 Msa1235360:CDS 45.0%
GTAGATTGTATCTACGGCGG+TGG - chr8_2:13322980-13322999 None:intergenic 50.0%
TACCACCTGGCCCAAAATCA+TGG + chr8_2:13322997-13323016 Msa1235360:CDS 50.0%
TCCCACATCAATCCCTCCAT+GGG + chr8_2:13323054-13323073 Msa1235360:CDS 50.0%
GGGCTTGATCCTACAATGAC+AGG - chr8_2:13323128-13323147 None:intergenic 50.0%
ACAAATGACGCTGTCCTTGC+GGG + chr8_2:13323173-13323192 Msa1235360:CDS 50.0%
GGTCCCAATACGGTCCATAT+TGG + chr8_2:13323252-13323271 Msa1235360:CDS 50.0%
GTAGATTGTATCTACGGCGG+TGG - chr8_2:13322980-13322999 None:intergenic 50.0%
TACCACCTGGCCCAAAATCA+TGG + chr8_2:13322997-13323016 Msa1235360:CDS 50.0%
TCCCACATCAATCCCTCCAT+GGG + chr8_2:13323054-13323073 Msa1235360:CDS 50.0%
GGGCTTGATCCTACAATGAC+AGG - chr8_2:13323128-13323147 None:intergenic 50.0%
ACAAATGACGCTGTCCTTGC+GGG + chr8_2:13323173-13323192 Msa1235360:CDS 50.0%
GGTCCCAATACGGTCCATAT+TGG + chr8_2:13323252-13323271 Msa1235360:CDS 50.0%
! ATGGGCCATGATTTTGGGCC+AGG - chr8_2:13323005-13323024 None:intergenic 55.0%
CTCCCACATCAATCCCTCCA+TGG + chr8_2:13323053-13323072 Msa1235360:CDS 55.0%
GCCCATGGAGGGATTGATGT+GGG - chr8_2:13323058-13323077 None:intergenic 55.0%
AGCCCATGGAGGGATTGATG+TGG - chr8_2:13323059-13323078 None:intergenic 55.0%
CAAATGACGCTGTCCTTGCG+GGG + chr8_2:13323174-13323193 Msa1235360:CDS 55.0%
ACCACCACCGTAACCCTAAC+CGG - chr8_2:13324290-13324309 None:intergenic 55.0%
! ATGGGCCATGATTTTGGGCC+AGG - chr8_2:13323005-13323024 None:intergenic 55.0%
CTCCCACATCAATCCCTCCA+TGG + chr8_2:13323053-13323072 Msa1235360:CDS 55.0%
GCCCATGGAGGGATTGATGT+GGG - chr8_2:13323058-13323077 None:intergenic 55.0%
AGCCCATGGAGGGATTGATG+TGG - chr8_2:13323059-13323078 None:intergenic 55.0%
CAAATGACGCTGTCCTTGCG+GGG + chr8_2:13323174-13323193 Msa1235360:CDS 55.0%
ACCACCACCGTAACCCTAAC+CGG - chr8_2:13324290-13324309 None:intergenic 55.0%
GGCGGCGGGTAAAGAGAAGA+AGG - chr8_2:13322947-13322966 None:intergenic 60.0%
TACGGCGGTGGAGACGAAGA+CGG - chr8_2:13322968-13322987 None:intergenic 60.0%
! GGCCATGATTTTGGGCCAGG+TGG - chr8_2:13323002-13323021 None:intergenic 60.0%
! CATGAACAAGGGTGCGACGC+CGG + chr8_2:13324268-13324287 Msa1235360:intron 60.0%
! TGCGACGCCGGTTAGGGTTA+CGG + chr8_2:13324280-13324299 Msa1235360:CDS 60.0%
GGCGGCGGGTAAAGAGAAGA+AGG - chr8_2:13322947-13322966 None:intergenic 60.0%
TACGGCGGTGGAGACGAAGA+CGG - chr8_2:13322968-13322987 None:intergenic 60.0%
! GGCCATGATTTTGGGCCAGG+TGG - chr8_2:13323002-13323021 None:intergenic 60.0%
! CATGAACAAGGGTGCGACGC+CGG + chr8_2:13324268-13324287 Msa1235360:intron 60.0%
! TGCGACGCCGGTTAGGGTTA+CGG + chr8_2:13324280-13324299 Msa1235360:CDS 60.0%
ATGACGCTGTCCTTGCGGGG+CGG + chr8_2:13323177-13323196 Msa1235360:CDS 65.0%
AGAATTTGGGCCGCCCCGCA+AGG - chr8_2:13323190-13323209 None:intergenic 65.0%
GGGCGGCCCAAATTCTCTGC+TGG + chr8_2:13323194-13323213 Msa1235360:CDS 65.0%
! ACAAGGGTGCGACGCCGGTT+AGG + chr8_2:13324273-13324292 Msa1235360:intron 65.0%
! CAAGGGTGCGACGCCGGTTA+GGG + chr8_2:13324274-13324293 Msa1235360:intron 65.0%
! GACGCCGGTTAGGGTTACGG+TGG + chr8_2:13324283-13324302 Msa1235360:CDS 65.0%
GCCGGTTAGGGTTACGGTGG+TGG + chr8_2:13324286-13324305 Msa1235360:CDS 65.0%
ATGACGCTGTCCTTGCGGGG+CGG + chr8_2:13323177-13323196 Msa1235360:CDS 65.0%
AGAATTTGGGCCGCCCCGCA+AGG - chr8_2:13323190-13323209 None:intergenic 65.0%
GGGCGGCCCAAATTCTCTGC+TGG + chr8_2:13323194-13323213 Msa1235360:CDS 65.0%
! ACAAGGGTGCGACGCCGGTT+AGG + chr8_2:13324273-13324292 Msa1235360:intron 65.0%
! CAAGGGTGCGACGCCGGTTA+GGG + chr8_2:13324274-13324293 Msa1235360:intron 65.0%
! GACGCCGGTTAGGGTTACGG+TGG + chr8_2:13324283-13324302 Msa1235360:CDS 65.0%
GCCGGTTAGGGTTACGGTGG+TGG + chr8_2:13324286-13324305 Msa1235360:CDS 65.0%
GTGGAGACGAAGACGGCGGC+GGG - chr8_2:13322961-13322980 None:intergenic 70.0%
GGTGGAGACGAAGACGGCGG+CGG - chr8_2:13322962-13322981 None:intergenic 70.0%
GGCGGTGGAGACGAAGACGG+CGG - chr8_2:13322965-13322984 None:intergenic 70.0%
GTGGAGACGAAGACGGCGGC+GGG - chr8_2:13322961-13322980 None:intergenic 70.0%
GGTGGAGACGAAGACGGCGG+CGG - chr8_2:13322962-13322981 None:intergenic 70.0%
GGCGGTGGAGACGAAGACGG+CGG - chr8_2:13322965-13322984 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 13322885 13324355 13322885 ID=Msa1235360;Name=Msa1235360
chr8_2 mRNA 13322885 13324355 13322885 ID=Msa1235360-mRNA-1;Parent=Msa1235360;Name=Msa1235360-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.5|1|1|2|0|330
chr8_2 exon 13322885 13323799 13322885 ID=Msa1235360-mRNA-1:exon:5139;Parent=Msa1235360-mRNA-1
chr8_2 exon 13324278 13324355 13324278 ID=Msa1235360-mRNA-1:exon:5140;Parent=Msa1235360-mRNA-1
chr8_2 CDS 13322885 13323799 13322885 ID=Msa1235360-mRNA-1:cds;Parent=Msa1235360-mRNA-1
chr8_2 CDS 13324278 13324355 13324278 ID=Msa1235360-mRNA-1:cds;Parent=Msa1235360-mRNA-1
Gene Sequence

>Msa1235360

ATGGTAGTAGAATTATTGCCACTTCCTAATTGGGTCATTTTTTTTACAACATTTATCGTCCTTCTTCTCTTTACCCGCCGCCGTCTTCGTCTCCACCGCCGTAGATACAATCTACCACCTGGCCCAAAATCATGGCCCATAATAGGAAATCTCAATCTTATTGGATCACTCCCACATCAATCCCTCCATGGGCTCACTAAAAAATATGGACCCATCATGCATTTATGGTTCGGCTCTAAACCTGTCATTGTAGGATCAAGCCCAGAAATAGCCAAAGCTTTCCTCAAAACAAATGACGCTGTCCTTGCGGGGCGGCCCAAATTCTCTGCTGGAAAATATACTACTTATAACTACTCCAACATTACTTGGTCCCAATACGGTCCATATTGGCAACAAGCTCGTAAAATGTGTTTACTAGAACTGTTTAGTGTAAAACGCCTTGAGTCTTATGAGTACATGAGAAAACAAGAGTTACATGCTTTTTTGCATGAACTATTCAACTCAAAAAACAAAACAATTTTGTTGAAGGACCATCTTTCAACTTTGAGTCTCAATGTTATAAGTCGCATGGTTTTGGGGAAGAAGTATTTGGAGAAGAGTGAAAATGCTATTATTTCCCCTGAAGAGTTTAAGAAGATGTTGGATGAATTGTTTTTGCTTAATGGGGTCCTCAATATTGGGGATTTTATTCCTTGGATTCATTTCTTAGACTTGCAAGGTTATGTGAAGAGAATGAAGGCTTTGGGTAAGAAGTTTGATTGGTTTATGGAACATGTGTTGGAGGAGCACATTGAAAGAAGGAAATGTGTTAATGATTATGTTGCTAAAGATATGGTGGATGTGCTTTTGAAGCTTGCTGAGAATCCTAGTCTTGAAGTCAAACTTGAGAGGCACGGAGTCAAAGCTTTTACTCAGGGTGCGACGCCGGTTAGGGTTACGGTGGTGGTGTTTGTTGACCTTTTGAAGAAACTAACTAGTTTATTTTTTAGATAG
Protein sequence

>Msa1235360

MVVELLPLPNWVIFFTTFIVLLLFTRRRLRLHRRRYNLPPGPKSWPIIGNLNLIGSLPHQSLHGLTKKYGPIMHLWFGSKPVIVGSSPEIAKAFLKTNDAVLAGRPKFSAGKYTTYNYSNITWSQYGPYWQQARKMCLLELFSVKRLESYEYMRKQELHAFLHELFNSKNKTILLKDHLSTLSLNVISRMVLGKKYLEKSENAIISPEEFKKMLDELFLLNGVLNIGDFIPWIHFLDLQGYVKRMKALGKKFDWFMEHVLEEHIERRKCVNDYVAKDMVDVLLKLAENPSLEVKLERHGVKAFTQGATPVRVTVVVFVDLLKKLTSLFFR*