Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315460 | XP_003627306.2 | 89.691 | 194 | 14 | 2 | 1 | 188 | 136 | 329 | 4.11e-114 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315460 | sp|A0A1D6HSP4|C92C5_MAIZE | 36.413 | 184 | 99 | 6 | 1 | 170 | 138 | 317 | 1.74e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315460 | G7L7J6 | 89.691 | 194 | 14 | 2 | 1 | 188 | 136 | 329 | 1.96e-114 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023060 | Msa1315460 | 0.803300 | 3.722417e-49 | -8.615850e-47 |
| Msa0632650 | Msa1315460 | 0.818629 | 1.773742e-52 | -8.615850e-47 |
| Msa0650600 | Msa1315460 | 0.816939 | 4.268914e-52 | -8.615850e-47 |
| Msa0162140 | Msa1315460 | 0.804934 | 1.702291e-49 | -8.615850e-47 |
| Msa1235360 | Msa1315460 | 0.918898 | 8.818249e-87 | -8.615850e-47 |
| Msa1235370 | Msa1315460 | 0.921785 | 2.289598e-88 | -8.615850e-47 |
| Msa1276540 | Msa1315460 | 0.904808 | 8.327755e-80 | -8.615850e-47 |
| Msa1315450 | Msa1315460 | 0.928931 | 1.435253e-92 | -8.615850e-47 |
| Msa1315460 | Msa1356030 | 0.911065 | 9.264998e-83 | -8.615850e-47 |
| Msa0398560 | Msa1315460 | 0.803952 | 2.727221e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315460 | MtrunA17_Chr8g0344181 | 89.691 | 194 | 14 | 2 | 1 | 188 | 136 | 329 | 3.78e-118 | 344 |
| Msa1315460 | MtrunA17_Chr8g0344151 | 88.824 | 170 | 19 | 0 | 1 | 170 | 134 | 303 | 2.58e-105 | 311 |
| Msa1315460 | MtrunA17_Chr8g0344191 | 87.349 | 166 | 21 | 0 | 5 | 170 | 171 | 336 | 5.57e-98 | 294 |
| Msa1315460 | MtrunA17_Chr8g0382901 | 39.286 | 168 | 96 | 2 | 1 | 168 | 590 | 751 | 5.44e-29 | 113 |
| Msa1315460 | MtrunA17_Chr8g0382901 | 35.088 | 171 | 84 | 5 | 1 | 168 | 126 | 272 | 2.43e-19 | 85.1 |
| Msa1315460 | MtrunA17_Chr2g0310381 | 35.829 | 187 | 107 | 5 | 1 | 180 | 126 | 306 | 3.11e-27 | 107 |
| Msa1315460 | MtrunA17_Chr2g0310391 | 35.294 | 187 | 108 | 5 | 1 | 180 | 126 | 306 | 8.67e-27 | 105 |
| Msa1315460 | MtrunA17_Chr2g0310361 | 37.879 | 132 | 77 | 2 | 37 | 168 | 10 | 136 | 4.72e-24 | 92.4 |
| Msa1315460 | MtrunA17_Chr1g0174471 | 37.143 | 175 | 100 | 4 | 1 | 168 | 148 | 319 | 2.76e-22 | 93.6 |
| Msa1315460 | MtrunA17_Chr3g0086691 | 33.974 | 156 | 96 | 4 | 1 | 152 | 130 | 282 | 3.64e-22 | 93.2 |
| Msa1315460 | MtrunA17_Chr3g0116681 | 33.333 | 168 | 105 | 3 | 1 | 167 | 138 | 299 | 6.75e-22 | 92.4 |
| Msa1315460 | MtrunA17_Chr4g0061381 | 32.143 | 196 | 117 | 7 | 4 | 188 | 132 | 322 | 1.27e-21 | 91.7 |
| Msa1315460 | MtrunA17_Chr7g0235551 | 37.356 | 174 | 100 | 5 | 1 | 169 | 132 | 301 | 4.07e-21 | 90.1 |
| Msa1315460 | MtrunA17_Chr8g0362481 | 33.526 | 173 | 107 | 4 | 1 | 168 | 64 | 233 | 3.88e-20 | 87.0 |
| Msa1315460 | MtrunA17_Chr1g0174481 | 32.749 | 171 | 108 | 3 | 1 | 168 | 132 | 298 | 9.87e-20 | 86.3 |
| Msa1315460 | MtrunA17_Chr4g0058231 | 30.168 | 179 | 108 | 4 | 1 | 168 | 126 | 298 | 1.54e-19 | 85.5 |
| Msa1315460 | MtrunA17_Chr1g0174421 | 30.409 | 171 | 112 | 3 | 1 | 168 | 146 | 312 | 2.74e-19 | 84.0 |
| Msa1315460 | MtrunA17_Chr7g0254641 | 33.962 | 159 | 95 | 4 | 1 | 151 | 135 | 291 | 1.07e-18 | 83.2 |
| Msa1315460 | MtrunA17_Chr3g0086661 | 36.719 | 128 | 76 | 3 | 4 | 127 | 133 | 259 | 2.10e-18 | 82.4 |
| Msa1315460 | MtrunA17_Chr4g0047661 | 30.460 | 174 | 108 | 4 | 1 | 167 | 146 | 313 | 2.14e-18 | 82.4 |
| Msa1315460 | MtrunA17_Chr3g0086651 | 36.719 | 128 | 76 | 3 | 4 | 127 | 133 | 259 | 2.36e-18 | 82.0 |
| Msa1315460 | MtrunA17_Chr4g0058191 | 30.994 | 171 | 107 | 5 | 1 | 167 | 123 | 286 | 4.52e-18 | 81.3 |
| Msa1315460 | MtrunA17_Chr3g0101651 | 27.368 | 190 | 119 | 5 | 1 | 179 | 137 | 318 | 4.77e-18 | 81.3 |
| Msa1315460 | MtrunA17_Chr8g0362701 | 33.526 | 173 | 107 | 4 | 1 | 168 | 133 | 302 | 6.27e-18 | 80.9 |
| Msa1315460 | MtrunA17_Chr4g0058201 | 29.825 | 171 | 110 | 4 | 1 | 168 | 126 | 289 | 6.89e-18 | 80.9 |
| Msa1315460 | MtrunA17_Chr1g0174451 | 30.857 | 175 | 107 | 5 | 1 | 167 | 135 | 303 | 1.23e-17 | 80.1 |
| Msa1315460 | MtrunA17_Chr4g0047631 | 29.885 | 174 | 103 | 7 | 1 | 167 | 147 | 308 | 1.88e-17 | 79.7 |
| Msa1315460 | MtrunA17_Chr6g0451691 | 33.333 | 174 | 92 | 5 | 4 | 157 | 144 | 313 | 2.01e-17 | 79.7 |
| Msa1315460 | MtrunA17_Chr8g0372251 | 29.379 | 177 | 107 | 4 | 1 | 167 | 133 | 301 | 4.98e-17 | 78.2 |
| Msa1315460 | MtrunA17_Chr6g0451741 | 32.164 | 171 | 97 | 5 | 4 | 157 | 163 | 331 | 5.19e-17 | 78.2 |
| Msa1315460 | MtrunA17_Chr4g0053621 | 30.625 | 160 | 93 | 4 | 4 | 152 | 132 | 284 | 6.63e-17 | 78.2 |
| Msa1315460 | MtrunA17_Chr3g0094171 | 30.682 | 176 | 111 | 4 | 4 | 172 | 141 | 312 | 9.78e-17 | 77.4 |
| Msa1315460 | MtrunA17_Chr6g0451781 | 32.335 | 167 | 97 | 5 | 5 | 157 | 178 | 342 | 1.04e-16 | 77.4 |
| Msa1315460 | MtrunA17_Chr3g0084921 | 27.119 | 177 | 116 | 3 | 1 | 168 | 133 | 305 | 1.14e-16 | 77.4 |
| Msa1315460 | MtrunA17_Chr1g0174461 | 30.460 | 174 | 111 | 3 | 1 | 168 | 134 | 303 | 2.88e-16 | 76.3 |
| Msa1315460 | MtrunA17_Chr6g0451801 | 32.143 | 168 | 98 | 5 | 5 | 157 | 143 | 309 | 3.08e-16 | 75.5 |
| Msa1315460 | MtrunA17_Chr3g0101701 | 28.571 | 154 | 98 | 3 | 1 | 150 | 137 | 282 | 3.76e-16 | 75.9 |
| Msa1315460 | MtrunA17_Chr3g0101711 | 28.324 | 173 | 110 | 4 | 1 | 167 | 136 | 300 | 5.56e-16 | 75.5 |
| Msa1315460 | MtrunA17_Chr4g0008101 | 28.824 | 170 | 103 | 5 | 4 | 157 | 142 | 309 | 1.51e-15 | 73.9 |
| Msa1315460 | MtrunA17_Chr3g0094231 | 30.263 | 152 | 94 | 6 | 1 | 148 | 134 | 277 | 2.26e-15 | 73.6 |
| Msa1315460 | MtrunA17_Chr4g0047641 | 29.070 | 172 | 112 | 4 | 1 | 168 | 148 | 313 | 2.52e-15 | 73.6 |
| Msa1315460 | MtrunA17_Chr2g0304871 | 32.258 | 155 | 92 | 3 | 5 | 150 | 143 | 293 | 3.92e-15 | 72.8 |
| Msa1315460 | MtrunA17_Chr6g0472311 | 27.624 | 181 | 112 | 6 | 1 | 168 | 139 | 313 | 4.21e-15 | 72.8 |
| Msa1315460 | MtrunA17_Chr7g0218601 | 27.895 | 190 | 126 | 4 | 1 | 183 | 133 | 318 | 5.75e-15 | 72.4 |
| Msa1315460 | MtrunA17_Chr3g0101691 | 28.902 | 173 | 109 | 4 | 1 | 167 | 137 | 301 | 6.06e-15 | 72.4 |
| Msa1315460 | MtrunA17_Chr5g0403351 | 24.211 | 190 | 125 | 4 | 1 | 179 | 135 | 316 | 7.12e-15 | 72.0 |
| Msa1315460 | MtrunA17_Chr7g0258211 | 29.412 | 170 | 113 | 3 | 1 | 168 | 137 | 301 | 7.73e-15 | 72.0 |
| Msa1315460 | MtrunA17_Chr4g0030741 | 32.487 | 197 | 107 | 8 | 5 | 188 | 165 | 348 | 1.98e-14 | 70.5 |
| Msa1315460 | MtrunA17_Chr4g0039391 | 31.373 | 153 | 96 | 4 | 5 | 152 | 138 | 286 | 2.18e-14 | 70.9 |
| Msa1315460 | MtrunA17_Chr7g0224561 | 30.366 | 191 | 104 | 5 | 5 | 179 | 133 | 310 | 2.47e-14 | 70.5 |
| Msa1315460 | MtrunA17_Chr3g0101581 | 27.907 | 172 | 111 | 4 | 1 | 167 | 135 | 298 | 3.19e-14 | 70.1 |
| Msa1315460 | MtrunA17_Chr5g0430111 | 28.289 | 152 | 98 | 3 | 1 | 150 | 135 | 277 | 3.76e-14 | 70.1 |
| Msa1315460 | MtrunA17_Chr5g0403321 | 26.570 | 207 | 130 | 5 | 1 | 193 | 135 | 333 | 5.00e-14 | 69.7 |
| Msa1315460 | MtrunA17_Chr4g0035921 | 27.322 | 183 | 109 | 6 | 1 | 167 | 135 | 309 | 5.38e-14 | 69.7 |
| Msa1315460 | MtrunA17_Chr6g0466331 | 27.083 | 192 | 117 | 7 | 1 | 179 | 133 | 314 | 6.23e-14 | 69.3 |
| Msa1315460 | MtrunA17_Chr5g0405001 | 29.730 | 148 | 95 | 3 | 1 | 148 | 142 | 280 | 6.52e-14 | 69.3 |
| Msa1315460 | MtrunA17_Chr7g0258221 | 34.286 | 175 | 104 | 4 | 1 | 168 | 132 | 302 | 7.41e-14 | 69.3 |
| Msa1315460 | MtrunA17_Chr6g0484841 | 28.947 | 152 | 96 | 4 | 1 | 150 | 135 | 276 | 7.92e-14 | 68.9 |
| Msa1315460 | MtrunA17_Chr6g0465511 | 27.083 | 192 | 117 | 7 | 1 | 179 | 133 | 314 | 9.12e-14 | 68.9 |
| Msa1315460 | MtrunA17_Chr7g0224551 | 29.843 | 191 | 105 | 5 | 5 | 179 | 133 | 310 | 1.00e-13 | 68.9 |
| Msa1315460 | MtrunA17_Chr7g0255531 | 27.329 | 161 | 103 | 4 | 1 | 152 | 126 | 281 | 1.08e-13 | 68.6 |
| Msa1315460 | MtrunA17_Chr3g0101661 | 24.339 | 189 | 125 | 5 | 1 | 179 | 137 | 317 | 1.11e-13 | 68.6 |
| Msa1315460 | MtrunA17_Chr5g0403331 | 26.842 | 190 | 120 | 5 | 1 | 179 | 136 | 317 | 1.51e-13 | 68.2 |
| Msa1315460 | MtrunA17_Chr8g0361471 | 26.562 | 192 | 118 | 7 | 1 | 179 | 133 | 314 | 1.58e-13 | 68.2 |
| Msa1315460 | MtrunA17_Chr2g0296661 | 27.374 | 179 | 117 | 5 | 1 | 171 | 130 | 303 | 1.69e-13 | 68.2 |
| Msa1315460 | MtrunA17_Chr8g0339311 | 27.848 | 158 | 108 | 2 | 1 | 152 | 144 | 301 | 2.35e-13 | 67.8 |
| Msa1315460 | MtrunA17_Chr5g0430101 | 26.490 | 151 | 98 | 3 | 2 | 150 | 135 | 274 | 2.84e-13 | 67.4 |
| Msa1315460 | MtrunA17_Chr4g0057001 | 28.743 | 167 | 117 | 2 | 1 | 167 | 148 | 312 | 2.89e-13 | 67.4 |
| Msa1315460 | MtrunA17_Chr4g0052851 | 29.921 | 127 | 77 | 2 | 4 | 127 | 135 | 252 | 2.94e-13 | 67.4 |
| Msa1315460 | MtrunA17_Chr3g0101571 | 26.667 | 180 | 116 | 4 | 1 | 172 | 134 | 305 | 4.01e-13 | 67.0 |
| Msa1315460 | MtrunA17_Chr4g0011921 | 29.240 | 171 | 111 | 5 | 1 | 167 | 128 | 292 | 6.50e-13 | 66.2 |
| Msa1315460 | MtrunA17_Chr4g0058261 | 25.000 | 172 | 118 | 5 | 1 | 167 | 162 | 327 | 8.06e-13 | 66.2 |
| Msa1315460 | MtrunA17_Chr5g0402971 | 29.697 | 165 | 104 | 4 | 1 | 156 | 140 | 301 | 8.27e-13 | 65.5 |
| Msa1315460 | MtrunA17_Chr6g0451751 | 27.545 | 167 | 107 | 4 | 4 | 157 | 144 | 309 | 9.10e-13 | 65.9 |
| Msa1315460 | MtrunA17_Chr6g0484811 | 26.882 | 186 | 99 | 7 | 1 | 168 | 135 | 301 | 1.01e-12 | 65.9 |
| Msa1315460 | MtrunA17_Chr5g0419691 | 29.605 | 152 | 99 | 4 | 2 | 150 | 129 | 275 | 1.17e-12 | 65.9 |
| Msa1315460 | MtrunA17_Chr5g0430081 | 25.150 | 167 | 113 | 4 | 1 | 165 | 133 | 289 | 1.25e-12 | 65.5 |
| Msa1315460 | MtrunA17_Chr4g0030711 | 29.843 | 191 | 114 | 6 | 5 | 179 | 139 | 325 | 1.67e-12 | 65.1 |
| Msa1315460 | MtrunA17_Chr2g0296651 | 27.742 | 155 | 101 | 3 | 5 | 153 | 133 | 282 | 1.72e-12 | 65.1 |
| Msa1315460 | MtrunA17_Chr3g0101671 | 26.425 | 193 | 119 | 6 | 1 | 180 | 137 | 319 | 2.39e-12 | 64.7 |
| Msa1315460 | MtrunA17_Chr4g0011861 | 29.412 | 153 | 101 | 4 | 1 | 150 | 128 | 276 | 2.64e-12 | 64.3 |
| Msa1315460 | MtrunA17_Chr3g0101831 | 26.901 | 171 | 113 | 4 | 1 | 167 | 136 | 298 | 2.89e-12 | 64.7 |
| Msa1315460 | MtrunA17_Chr4g0052861 | 28.662 | 157 | 98 | 4 | 4 | 153 | 133 | 282 | 4.24e-12 | 63.9 |
| Msa1315460 | MtrunA17_Chr5g0401681 | 29.008 | 131 | 86 | 3 | 4 | 128 | 133 | 262 | 4.71e-12 | 63.9 |
| Msa1315460 | MtrunA17_Chr5g0401691 | 30.519 | 154 | 95 | 4 | 4 | 153 | 152 | 297 | 4.80e-12 | 63.9 |
| Msa1315460 | MtrunA17_Chr3g0101751 | 25.000 | 172 | 116 | 4 | 1 | 167 | 141 | 304 | 5.23e-12 | 63.9 |
| Msa1315460 | MtrunA17_Chr3g0116721 | 28.659 | 164 | 107 | 6 | 9 | 167 | 1 | 159 | 7.23e-12 | 61.6 |
| Msa1315460 | MtrunA17_Chr4g0011871 | 28.758 | 153 | 102 | 4 | 1 | 150 | 128 | 276 | 7.42e-12 | 63.2 |
| Msa1315460 | MtrunA17_Chr1g0200951 | 30.769 | 156 | 99 | 5 | 6 | 157 | 165 | 315 | 9.33e-12 | 63.2 |
| Msa1315460 | MtrunA17_Chr3g0086671 | 44.000 | 75 | 39 | 2 | 56 | 128 | 1 | 74 | 9.81e-12 | 60.1 |
| Msa1315460 | MtrunA17_Chr3g0082701 | 26.901 | 171 | 106 | 4 | 4 | 157 | 142 | 310 | 9.89e-12 | 63.2 |
| Msa1315460 | MtrunA17_Chr4g0030701 | 28.736 | 174 | 110 | 4 | 5 | 168 | 137 | 306 | 1.44e-11 | 62.4 |
| Msa1315460 | MtrunA17_Chr1g0207841 | 26.562 | 192 | 120 | 5 | 5 | 179 | 140 | 327 | 1.57e-11 | 62.4 |
| Msa1315460 | MtrunA17_Chr3g0101801 | 23.256 | 172 | 119 | 3 | 1 | 167 | 141 | 304 | 1.80e-11 | 62.4 |
| Msa1315460 | MtrunA17_Chr5g0430131 | 27.815 | 151 | 97 | 4 | 2 | 150 | 136 | 276 | 2.72e-11 | 61.6 |
| Msa1315460 | MtrunA17_Chr3g0101611 | 28.141 | 199 | 122 | 7 | 1 | 187 | 136 | 325 | 2.88e-11 | 61.6 |
| Msa1315460 | MtrunA17_Chr5g0445531 | 27.451 | 153 | 96 | 4 | 1 | 150 | 138 | 278 | 3.12e-11 | 61.6 |
| Msa1315460 | MtrunA17_Chr4g0056951 | 26.786 | 168 | 120 | 3 | 1 | 167 | 142 | 307 | 3.49e-11 | 61.2 |
| Msa1315460 | MtrunA17_Chr5g0406651 | 27.485 | 171 | 114 | 5 | 1 | 167 | 129 | 293 | 3.73e-11 | 61.2 |
| Msa1315460 | MtrunA17_Chr4g0024771 | 25.974 | 154 | 101 | 4 | 1 | 152 | 138 | 280 | 5.72e-11 | 60.8 |
| Msa1315460 | MtrunA17_Chr5g0430031 | 23.333 | 150 | 104 | 3 | 1 | 148 | 135 | 275 | 6.10e-11 | 60.8 |
| Msa1315460 | MtrunA17_Chr8g0390881 | 25.424 | 177 | 116 | 5 | 1 | 169 | 134 | 302 | 6.39e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315460 | AT5G07990.1 | 33.333 | 147 | 93 | 2 | 4 | 150 | 134 | 275 | 2.54e-20 | 88.2 |
| Msa1315460 | AT5G06900.1 | 33.529 | 170 | 107 | 3 | 1 | 168 | 132 | 297 | 5.45e-20 | 87.4 |
| Msa1315460 | AT1G01280.1 | 34.161 | 161 | 95 | 6 | 1 | 153 | 130 | 287 | 1.05e-18 | 83.6 |
| Msa1315460 | AT3G48320.1 | 26.627 | 169 | 110 | 3 | 1 | 168 | 130 | 285 | 2.92e-18 | 82.4 |
| Msa1315460 | AT3G48310.1 | 27.811 | 169 | 108 | 3 | 1 | 168 | 130 | 285 | 6.75e-18 | 81.3 |
| Msa1315460 | AT3G48280.1 | 29.070 | 172 | 105 | 4 | 1 | 169 | 128 | 285 | 1.11e-17 | 80.5 |
| Msa1315460 | AT4G31940.1 | 31.818 | 176 | 94 | 6 | 1 | 157 | 133 | 301 | 2.67e-17 | 79.7 |
| Msa1315460 | AT4G31970.1 | 31.138 | 167 | 98 | 4 | 1 | 153 | 133 | 296 | 3.73e-17 | 79.3 |
| Msa1315460 | AT3G48300.1 | 27.638 | 199 | 124 | 5 | 1 | 192 | 127 | 312 | 1.95e-16 | 77.0 |
| Msa1315460 | AT3G48300.2 | 27.638 | 199 | 124 | 5 | 1 | 192 | 129 | 314 | 1.96e-16 | 77.0 |
| Msa1315460 | AT5G67310.1 | 30.645 | 186 | 96 | 6 | 2 | 161 | 143 | 321 | 2.14e-16 | 77.0 |
| Msa1315460 | AT4G37310.1 | 34.615 | 130 | 79 | 3 | 4 | 128 | 134 | 262 | 4.79e-16 | 75.9 |
| Msa1315460 | AT4G37400.1 | 32.680 | 153 | 96 | 2 | 1 | 153 | 130 | 275 | 5.20e-16 | 75.9 |
| Msa1315460 | AT3G48270.1 | 25.444 | 169 | 112 | 3 | 1 | 168 | 129 | 284 | 1.80e-15 | 74.3 |
| Msa1315460 | AT3G48290.1 | 27.976 | 168 | 107 | 3 | 1 | 167 | 131 | 285 | 3.69e-15 | 73.2 |
| Msa1315460 | AT3G48290.2 | 27.976 | 168 | 107 | 3 | 1 | 167 | 131 | 285 | 3.99e-15 | 73.2 |
| Msa1315460 | AT4G31950.1 | 30.588 | 170 | 104 | 4 | 1 | 157 | 121 | 289 | 1.24e-14 | 72.0 |
| Msa1315460 | AT2G30770.1 | 28.070 | 171 | 106 | 6 | 1 | 166 | 131 | 289 | 4.63e-14 | 70.1 |
| Msa1315460 | AT4G13310.1 | 27.485 | 171 | 110 | 4 | 1 | 166 | 130 | 291 | 1.06e-13 | 68.9 |
| Msa1315460 | AT4G13310.2 | 26.901 | 171 | 111 | 4 | 1 | 166 | 130 | 291 | 1.37e-13 | 68.6 |
| Msa1315460 | AT1G74550.1 | 28.571 | 133 | 83 | 3 | 1 | 127 | 122 | 248 | 1.63e-13 | 68.6 |
| Msa1315460 | AT4G36220.1 | 27.941 | 136 | 90 | 3 | 1 | 136 | 138 | 265 | 3.62e-13 | 67.4 |
| Msa1315460 | AT4G12300.1 | 29.825 | 171 | 114 | 4 | 1 | 168 | 140 | 307 | 5.60e-13 | 67.0 |
| Msa1315460 | AT4G13290.1 | 28.750 | 160 | 100 | 5 | 1 | 155 | 131 | 281 | 1.28e-12 | 65.9 |
| Msa1315460 | AT5G24960.1 | 29.586 | 169 | 107 | 4 | 1 | 166 | 131 | 290 | 3.47e-12 | 64.7 |
| Msa1315460 | AT5G24960.2 | 29.586 | 169 | 107 | 4 | 1 | 166 | 131 | 290 | 3.58e-12 | 64.7 |
| Msa1315460 | AT2G30750.1 | 26.627 | 169 | 111 | 4 | 1 | 166 | 131 | 289 | 6.81e-12 | 63.9 |
| Msa1315460 | AT5G44620.1 | 26.036 | 169 | 121 | 2 | 1 | 167 | 144 | 310 | 1.50e-11 | 62.8 |
| Msa1315460 | AT5G57220.1 | 29.801 | 151 | 98 | 3 | 1 | 150 | 129 | 272 | 1.53e-11 | 62.8 |
Find 48 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGCTTTGGCTATTTC+TGG | 0.077723 | 8_4:+14931012 | None:intergenic |
| TAAGAAGTTTGATTGGTTTA+TGG | 0.179270 | 8_4:-14930527 | Msa1315460:CDS |
| CTTAATGGGGTCCTCAATAT+TGG | 0.210178 | 8_4:-14930616 | Msa1315460:CDS |
| TGTTATAAGTCGCATGGTTT+TGG | 0.225625 | 8_4:-14930719 | Msa1315460:CDS |
| TTACGAGCTTGTTGCCAATA+TGG | 0.293261 | 8_4:+14930892 | None:intergenic |
| ACAAATGACGCTGTCCTTGC+TGG | 0.306475 | 8_4:-14930985 | Msa1315460:five_prime_UTR |
| TTAATGGGGTCCTCAATATT+GGG | 0.313985 | 8_4:-14930615 | Msa1315460:CDS |
| AACATCTTCTTAAACTCTTC+AGG | 0.314482 | 8_4:+14930655 | None:intergenic |
| TTGCCAATATGGACCGTATT+GGG | 0.355477 | 8_4:+14930903 | None:intergenic |
| ACAAGGGTGCGACGCCGGTT+AGG | 0.367767 | 8_4:-14929885 | Msa1315460:intron |
| AACTAGTTAGTTTCTTCAAA+AGG | 0.403214 | 8_4:+14929839 | None:intergenic |
| GGTCCCAATACGGTCCATAT+TGG | 0.410076 | 8_4:-14930906 | Msa1315460:five_prime_UTR |
| TGTGAAGAGAATGAAGGCTT+TGG | 0.411518 | 8_4:-14930551 | Msa1315460:CDS |
| TGCGACGCCGGTTAGGGTTA+CGG | 0.413960 | 8_4:-14929878 | Msa1315460:CDS |
| ACCACCACCGTAACCCTAAC+CGG | 0.417449 | 8_4:+14929871 | None:intergenic |
| GTGAAGAGAATGAAGGCTTT+GGG | 0.421112 | 8_4:-14930550 | Msa1315460:CDS |
| GGGCGGCCCAAATTCTCTGC+TGG | 0.422252 | 8_4:-14930964 | Msa1315460:five_prime_UTR |
| TGATTATGTTGCTAAAGATA+TGG | 0.441940 | 8_4:-14930461 | Msa1315460:CDS |
| ACATCTTCTTAAACTCTTCA+GGG | 0.443345 | 8_4:+14930656 | None:intergenic |
| CTTTGGGTAAGAAGTTTGAT+TGG | 0.443413 | 8_4:-14930534 | Msa1315460:CDS |
| GTTGCCAATATGGACCGTAT+TGG | 0.458748 | 8_4:+14930902 | None:intergenic |
| ATAACTACTCCAACATTACT+TGG | 0.463341 | 8_4:-14930927 | Msa1315460:five_prime_UTR |
| GCCGGTTAGGGTTACGGTGG+TGG | 0.468143 | 8_4:-14929872 | Msa1315460:CDS |
| CAAGGGTGCGACGCCGGTTA+GGG | 0.473436 | 8_4:-14929884 | Msa1315460:intron |
| AACATTACTTGGTCCCAATA+CGG | 0.514480 | 8_4:-14930916 | Msa1315460:five_prime_UTR |
| TGAAGAGTTTAAGAAGATGT+TGG | 0.518059 | 8_4:-14930653 | Msa1315460:CDS |
| TTGGTTTATGGAACATGTGT+TGG | 0.518587 | 8_4:-14930515 | Msa1315460:CDS |
| CAAATGACGCTGTCCTTGCT+GGG | 0.520908 | 8_4:-14930984 | Msa1315460:five_prime_UTR |
| GAATAAAATCCCCAATATTG+AGG | 0.540420 | 8_4:+14930605 | None:intergenic |
| TGAGACTCAAAGTTGAAAGA+TGG | 0.549640 | 8_4:+14930743 | None:intergenic |
| ATTCATTTCTTAGACTTGCA+AGG | 0.553866 | 8_4:-14930577 | Msa1315460:CDS |
| GTTTATGGAACATGTGTTGG+AGG | 0.565313 | 8_4:-14930512 | Msa1315460:CDS |
| CATGAACAAGGGTGCGACGC+CGG | 0.567766 | 8_4:-14929890 | Msa1315460:intron |
| AGAATTTGGGCCGCCCAGCA+AGG | 0.570465 | 8_4:+14930971 | None:intergenic |
| TCTCAATGTTATAAGTCGCA+TGG | 0.578721 | 8_4:-14930725 | Msa1315460:CDS |
| TCATGTACTCATAAGACTCA+AGG | 0.586026 | 8_4:+14930836 | None:intergenic |
| TAATGGGGTCCTCAATATTG+GGG | 0.589856 | 8_4:-14930614 | Msa1315460:CDS |
| TCAAGTTTGACTTCAAGACT+AGG | 0.593248 | 8_4:+14930409 | None:intergenic |
| GTATTGGGACCAAGTAATGT+TGG | 0.601241 | 8_4:+14930918 | None:intergenic |
| TGGAGGAGCACATTGAAAGA+AGG | 0.603017 | 8_4:-14930495 | Msa1315460:CDS |
| CATCTTCTTAAACTCTTCAG+GGG | 0.610959 | 8_4:+14930657 | None:intergenic |
| TTATGTTGCTAAAGATATGG+TGG | 0.612335 | 8_4:-14930458 | Msa1315460:CDS |
| AGGTTATGTGAAGAGAATGA+AGG | 0.616727 | 8_4:-14930557 | Msa1315460:CDS |
| AAGTCTAAGAAATGAATCCA+AGG | 0.620156 | 8_4:+14930583 | None:intergenic |
| GTCTTGAAGTCAAACTTGAG+AGG | 0.644499 | 8_4:-14930405 | Msa1315460:CDS |
| GAAGTCAAACTTGAGAGGCA+CGG | 0.668845 | 8_4:-14930400 | Msa1315460:CDS |
| ATGACGCTGTCCTTGCTGGG+CGG | 0.705430 | 8_4:-14930981 | Msa1315460:five_prime_UTR |
| GACGCCGGTTAGGGTTACGG+TGG | 0.745470 | 8_4:-14929875 | Msa1315460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACATAATTAATATCAGT+AGG | + | chr8_4:14930545-14930564 | None:intergenic | 15.0% |
| !!! | TCTATTTAAAAGTTTTAAGT+GGG | - | chr8_4:14930603-14930622 | Msa1315460:CDS | 15.0% |
| !! | GTTTACATCTAAAAAAAAAT+TGG | - | chr8_4:14930786-14930805 | Msa1315460:CDS | 15.0% |
| !! | AATACATAATTAATATCAGT+AGG | + | chr8_4:14930545-14930564 | None:intergenic | 15.0% |
| !!! | TCTATTTAAAAGTTTTAAGT+GGG | - | chr8_4:14930603-14930622 | Msa1315460:CDS | 15.0% |
| !! | GTTTACATCTAAAAAAAAAT+TGG | - | chr8_4:14930786-14930805 | Msa1315460:CDS | 15.0% |
| !!! | AAACAAAACAATTTTGTTGA+AGG | - | chr8_4:14930073-14930092 | Msa1315460:intron | 20.0% |
| !!! | ATGAATTGTTTTTGCTTAAT+GGG | - | chr8_4:14930210-14930229 | Msa1315460:intron | 20.0% |
| !!! | CACTTAAAACTTTTAAATAG+AGG | + | chr8_4:14930604-14930623 | None:intergenic | 20.0% |
| !!! | CTCTATTTAAAAGTTTTAAG+TGG | - | chr8_4:14930602-14930621 | Msa1315460:CDS | 20.0% |
| !!! | ATTGGGTTTTGAAAAAAAAT+TGG | + | chr8_4:14930821-14930840 | None:intergenic | 20.0% |
| !!! | AAACAAAACAATTTTGTTGA+AGG | - | chr8_4:14930073-14930092 | Msa1315460:intron | 20.0% |
| !!! | ATGAATTGTTTTTGCTTAAT+GGG | - | chr8_4:14930210-14930229 | Msa1315460:intron | 20.0% |
| !!! | CACTTAAAACTTTTAAATAG+AGG | + | chr8_4:14930604-14930623 | None:intergenic | 20.0% |
| !!! | CTCTATTTAAAAGTTTTAAG+TGG | - | chr8_4:14930602-14930621 | Msa1315460:CDS | 20.0% |
| !!! | ATTGGGTTTTGAAAAAAAAT+TGG | + | chr8_4:14930821-14930840 | None:intergenic | 20.0% |
| !!! | GATGAATTGTTTTTGCTTAA+TGG | - | chr8_4:14930209-14930228 | Msa1315460:intron | 25.0% |
| !!! | TGAATTGTTTTTGCTTAATG+GGG | - | chr8_4:14930211-14930230 | Msa1315460:intron | 25.0% |
| !!! | TAAGAAGTTTGATTGGTTTA+TGG | - | chr8_4:14930313-14930332 | Msa1315460:intron | 25.0% |
| ! | TGATTATGTTGCTAAAGATA+TGG | - | chr8_4:14930379-14930398 | Msa1315460:intron | 25.0% |
| !! | TAAAAAAAAATTGGCCCTTT+TGG | - | chr8_4:14930795-14930814 | Msa1315460:CDS | 25.0% |
| ! | TGAAAAAAAATTGGCCAAAA+GGG | + | chr8_4:14930812-14930831 | None:intergenic | 25.0% |
| ! | TTGAAAAAAAATTGGCCAAA+AGG | + | chr8_4:14930813-14930832 | None:intergenic | 25.0% |
| ! | AAAAGGAAACATTTCATTTC+AGG | + | chr8_4:14930907-14930926 | None:intergenic | 25.0% |
| !! | AACTAGTTAGTTTCTTCAAA+AGG | + | chr8_4:14931004-14931023 | None:intergenic | 25.0% |
| !!! | GATGAATTGTTTTTGCTTAA+TGG | - | chr8_4:14930209-14930228 | Msa1315460:intron | 25.0% |
| !!! | TGAATTGTTTTTGCTTAATG+GGG | - | chr8_4:14930211-14930230 | Msa1315460:intron | 25.0% |
| !!! | TAAGAAGTTTGATTGGTTTA+TGG | - | chr8_4:14930313-14930332 | Msa1315460:intron | 25.0% |
| ! | TGATTATGTTGCTAAAGATA+TGG | - | chr8_4:14930379-14930398 | Msa1315460:intron | 25.0% |
| !! | TAAAAAAAAATTGGCCCTTT+TGG | - | chr8_4:14930795-14930814 | Msa1315460:CDS | 25.0% |
| ! | TGAAAAAAAATTGGCCAAAA+GGG | + | chr8_4:14930812-14930831 | None:intergenic | 25.0% |
| ! | TTGAAAAAAAATTGGCCAAA+AGG | + | chr8_4:14930813-14930832 | None:intergenic | 25.0% |
| ! | AAAAGGAAACATTTCATTTC+AGG | + | chr8_4:14930907-14930926 | None:intergenic | 25.0% |
| !! | AACTAGTTAGTTTCTTCAAA+AGG | + | chr8_4:14931004-14931023 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTGAGGAAAGCTT+TGG | + | chr8_4:14929841-14929860 | None:intergenic | 30.0% |
| ! | TATTTTCCAGCAGAGAATTT+GGG | + | chr8_4:14929885-14929904 | None:intergenic | 30.0% |
| ! | ATATTTTCCAGCAGAGAATT+TGG | + | chr8_4:14929886-14929905 | None:intergenic | 30.0% |
| ATAACTACTCCAACATTACT+TGG | - | chr8_4:14929913-14929932 | Msa1315460:intron | 30.0% | |
| ACATCTTCTTAAACTCTTCA+GGG | + | chr8_4:14930187-14930206 | None:intergenic | 30.0% | |
| AACATCTTCTTAAACTCTTC+AGG | + | chr8_4:14930188-14930207 | None:intergenic | 30.0% | |
| TGAAGAGTTTAAGAAGATGT+TGG | - | chr8_4:14930187-14930206 | Msa1315460:intron | 30.0% | |
| GAATAAAATCCCCAATATTG+AGG | + | chr8_4:14930238-14930257 | None:intergenic | 30.0% | |
| ! | ATATTGGGGATTTTATTCCT+TGG | - | chr8_4:14930240-14930259 | Msa1315460:intron | 30.0% |
| AAGTCTAAGAAATGAATCCA+AGG | + | chr8_4:14930260-14930279 | None:intergenic | 30.0% | |
| ATTCATTTCTTAGACTTGCA+AGG | - | chr8_4:14930263-14930282 | Msa1315460:intron | 30.0% | |
| TTATGTTGCTAAAGATATGG+TGG | - | chr8_4:14930382-14930401 | Msa1315460:CDS | 30.0% | |
| TAATGAAGATGCTCATTTAG+AGG | + | chr8_4:14930577-14930596 | None:intergenic | 30.0% | |
| !! | AAACTCGATTTGGAAAACAT+TGG | + | chr8_4:14930652-14930671 | None:intergenic | 30.0% |
| ! | TTTACCGAGTTTACGTTTTT+AGG | - | chr8_4:14930684-14930703 | Msa1315460:CDS | 30.0% |
| !! | AACTCGATTTCTGGTAAAAT+CGG | - | chr8_4:14930734-14930753 | Msa1315460:CDS | 30.0% |
| AGATGTAAACTCGTAAAACT+CGG | + | chr8_4:14930776-14930795 | None:intergenic | 30.0% | |
| TCAGGAACATGTTACTATAA+AGG | + | chr8_4:14930889-14930908 | None:intergenic | 30.0% | |
| TTGTTCATGATTTGAGAACT+CGG | + | chr8_4:14930939-14930958 | None:intergenic | 30.0% | |
| AGTTCTCAAATCATGAACAA+GGG | - | chr8_4:14930939-14930958 | Msa1315460:five_prime_UTR | 30.0% | |
| !!! | ATTTGTTTTGAGGAAAGCTT+TGG | + | chr8_4:14929841-14929860 | None:intergenic | 30.0% |
| ! | TATTTTCCAGCAGAGAATTT+GGG | + | chr8_4:14929885-14929904 | None:intergenic | 30.0% |
| ! | ATATTTTCCAGCAGAGAATT+TGG | + | chr8_4:14929886-14929905 | None:intergenic | 30.0% |
| ATAACTACTCCAACATTACT+TGG | - | chr8_4:14929913-14929932 | Msa1315460:intron | 30.0% | |
| ACATCTTCTTAAACTCTTCA+GGG | + | chr8_4:14930187-14930206 | None:intergenic | 30.0% | |
| AACATCTTCTTAAACTCTTC+AGG | + | chr8_4:14930188-14930207 | None:intergenic | 30.0% | |
| TGAAGAGTTTAAGAAGATGT+TGG | - | chr8_4:14930187-14930206 | Msa1315460:intron | 30.0% | |
| GAATAAAATCCCCAATATTG+AGG | + | chr8_4:14930238-14930257 | None:intergenic | 30.0% | |
| ! | ATATTGGGGATTTTATTCCT+TGG | - | chr8_4:14930240-14930259 | Msa1315460:intron | 30.0% |
| AAGTCTAAGAAATGAATCCA+AGG | + | chr8_4:14930260-14930279 | None:intergenic | 30.0% | |
| ATTCATTTCTTAGACTTGCA+AGG | - | chr8_4:14930263-14930282 | Msa1315460:intron | 30.0% | |
| TTATGTTGCTAAAGATATGG+TGG | - | chr8_4:14930382-14930401 | Msa1315460:CDS | 30.0% | |
| TAATGAAGATGCTCATTTAG+AGG | + | chr8_4:14930577-14930596 | None:intergenic | 30.0% | |
| !! | AAACTCGATTTGGAAAACAT+TGG | + | chr8_4:14930652-14930671 | None:intergenic | 30.0% |
| ! | TTTACCGAGTTTACGTTTTT+AGG | - | chr8_4:14930684-14930703 | Msa1315460:CDS | 30.0% |
| !! | AACTCGATTTCTGGTAAAAT+CGG | - | chr8_4:14930734-14930753 | Msa1315460:CDS | 30.0% |
| AGATGTAAACTCGTAAAACT+CGG | + | chr8_4:14930776-14930795 | None:intergenic | 30.0% | |
| TCAGGAACATGTTACTATAA+AGG | + | chr8_4:14930889-14930908 | None:intergenic | 30.0% | |
| TTGTTCATGATTTGAGAACT+CGG | + | chr8_4:14930939-14930958 | None:intergenic | 30.0% | |
| AGTTCTCAAATCATGAACAA+GGG | - | chr8_4:14930939-14930958 | Msa1315460:five_prime_UTR | 30.0% | |
| AACATTACTTGGTCCCAATA+CGG | - | chr8_4:14929924-14929943 | Msa1315460:intron | 35.0% | |
| TCATGTACTCATAAGACTCA+AGG | + | chr8_4:14930007-14930026 | None:intergenic | 35.0% | |
| TGAGACTCAAAGTTGAAAGA+TGG | + | chr8_4:14930100-14930119 | None:intergenic | 35.0% | |
| TCTCAATGTTATAAGTCGCA+TGG | - | chr8_4:14930115-14930134 | Msa1315460:intron | 35.0% | |
| ! | TGTTATAAGTCGCATGGTTT+TGG | - | chr8_4:14930121-14930140 | Msa1315460:intron | 35.0% |
| ! | GTTATAAGTCGCATGGTTTT+GGG | - | chr8_4:14930122-14930141 | Msa1315460:intron | 35.0% |
| !! | TTATAAGTCGCATGGTTTTG+GGG | - | chr8_4:14930123-14930142 | Msa1315460:intron | 35.0% |
| CATCTTCTTAAACTCTTCAG+GGG | + | chr8_4:14930186-14930205 | None:intergenic | 35.0% | |
| TTAATGGGGTCCTCAATATT+GGG | - | chr8_4:14930225-14930244 | Msa1315460:intron | 35.0% | |
| AGGTTATGTGAAGAGAATGA+AGG | - | chr8_4:14930283-14930302 | Msa1315460:intron | 35.0% | |
| CTTTGGGTAAGAAGTTTGAT+TGG | - | chr8_4:14930306-14930325 | Msa1315460:intron | 35.0% | |
| TTGGTTTATGGAACATGTGT+TGG | - | chr8_4:14930325-14930344 | Msa1315460:intron | 35.0% | |
| ! | TCAAGTTTGACTTCAAGACT+AGG | + | chr8_4:14930434-14930453 | None:intergenic | 35.0% |
| AAACGTAAACTCGGTAAACT+CGG | + | chr8_4:14930682-14930701 | None:intergenic | 35.0% | |
| GGTACCTAAAAACGTAAACT+CGG | + | chr8_4:14930691-14930710 | None:intergenic | 35.0% | |
| GTTCTTGTAGAAAACGCATT+GGG | + | chr8_4:14930838-14930857 | None:intergenic | 35.0% | |
| TGTTCTTGTAGAAAACGCAT+TGG | + | chr8_4:14930839-14930858 | None:intergenic | 35.0% | |
| GAGTTCTCAAATCATGAACA+AGG | - | chr8_4:14930938-14930957 | Msa1315460:five_prime_UTR | 35.0% | |
| AACATTACTTGGTCCCAATA+CGG | - | chr8_4:14929924-14929943 | Msa1315460:intron | 35.0% | |
| TCATGTACTCATAAGACTCA+AGG | + | chr8_4:14930007-14930026 | None:intergenic | 35.0% | |
| TGAGACTCAAAGTTGAAAGA+TGG | + | chr8_4:14930100-14930119 | None:intergenic | 35.0% | |
| TCTCAATGTTATAAGTCGCA+TGG | - | chr8_4:14930115-14930134 | Msa1315460:intron | 35.0% | |
| ! | TGTTATAAGTCGCATGGTTT+TGG | - | chr8_4:14930121-14930140 | Msa1315460:intron | 35.0% |
| ! | GTTATAAGTCGCATGGTTTT+GGG | - | chr8_4:14930122-14930141 | Msa1315460:intron | 35.0% |
| !! | TTATAAGTCGCATGGTTTTG+GGG | - | chr8_4:14930123-14930142 | Msa1315460:intron | 35.0% |
| CATCTTCTTAAACTCTTCAG+GGG | + | chr8_4:14930186-14930205 | None:intergenic | 35.0% | |
| TTAATGGGGTCCTCAATATT+GGG | - | chr8_4:14930225-14930244 | Msa1315460:intron | 35.0% | |
| AGGTTATGTGAAGAGAATGA+AGG | - | chr8_4:14930283-14930302 | Msa1315460:intron | 35.0% | |
| CTTTGGGTAAGAAGTTTGAT+TGG | - | chr8_4:14930306-14930325 | Msa1315460:intron | 35.0% | |
| TTGGTTTATGGAACATGTGT+TGG | - | chr8_4:14930325-14930344 | Msa1315460:intron | 35.0% | |
| ! | TCAAGTTTGACTTCAAGACT+AGG | + | chr8_4:14930434-14930453 | None:intergenic | 35.0% |
| AAACGTAAACTCGGTAAACT+CGG | + | chr8_4:14930682-14930701 | None:intergenic | 35.0% | |
| GGTACCTAAAAACGTAAACT+CGG | + | chr8_4:14930691-14930710 | None:intergenic | 35.0% | |
| GTTCTTGTAGAAAACGCATT+GGG | + | chr8_4:14930838-14930857 | None:intergenic | 35.0% | |
| TGTTCTTGTAGAAAACGCAT+TGG | + | chr8_4:14930839-14930858 | None:intergenic | 35.0% | |
| GAGTTCTCAAATCATGAACA+AGG | - | chr8_4:14930938-14930957 | Msa1315460:five_prime_UTR | 35.0% | |
| !! | GGAAAGCTTTGGCTATTTCT+GGG | + | chr8_4:14929830-14929849 | None:intergenic | 40.0% |
| ! | AGGAAAGCTTTGGCTATTTC+TGG | + | chr8_4:14929831-14929850 | None:intergenic | 40.0% |
| GTATTGGGACCAAGTAATGT+TGG | + | chr8_4:14929925-14929944 | None:intergenic | 40.0% | |
| TTGCCAATATGGACCGTATT+GGG | + | chr8_4:14929940-14929959 | None:intergenic | 40.0% | |
| !! | TTACGAGCTTGTTGCCAATA+TGG | + | chr8_4:14929951-14929970 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGGAAGAAGTATT+TGG | - | chr8_4:14930136-14930155 | Msa1315460:intron | 40.0% |
| CTTAATGGGGTCCTCAATAT+TGG | - | chr8_4:14930224-14930243 | Msa1315460:intron | 40.0% | |
| TAATGGGGTCCTCAATATTG+GGG | - | chr8_4:14930226-14930245 | Msa1315460:intron | 40.0% | |
| TGTGAAGAGAATGAAGGCTT+TGG | - | chr8_4:14930289-14930308 | Msa1315460:intron | 40.0% | |
| GTGAAGAGAATGAAGGCTTT+GGG | - | chr8_4:14930290-14930309 | Msa1315460:intron | 40.0% | |
| GTTTATGGAACATGTGTTGG+AGG | - | chr8_4:14930328-14930347 | Msa1315460:intron | 40.0% | |
| GTCTTGAAGTCAAACTTGAG+AGG | - | chr8_4:14930435-14930454 | Msa1315460:CDS | 40.0% | |
| ! | CGGAGTGTTAAAACTCGATT+TGG | + | chr8_4:14930662-14930681 | None:intergenic | 40.0% |
| ! | CCTCTGAGTTAACACGATTT+TGG | + | chr8_4:14930712-14930731 | None:intergenic | 40.0% |
| CCAAAATCGTGTTAACTCAG+AGG | - | chr8_4:14930709-14930728 | Msa1315460:CDS | 40.0% | |
| TCAGAGGTAAACTCGATTTC+TGG | - | chr8_4:14930725-14930744 | Msa1315460:CDS | 40.0% | |
| !! | CGATTTCTGGTAAAATCGGA+AGG | - | chr8_4:14930738-14930757 | Msa1315460:CDS | 40.0% |
| GAACTCGGAGAAGAAAGAAA+AGG | + | chr8_4:14930924-14930943 | None:intergenic | 40.0% | |
| !! | GGAAAGCTTTGGCTATTTCT+GGG | + | chr8_4:14929830-14929849 | None:intergenic | 40.0% |
| ! | AGGAAAGCTTTGGCTATTTC+TGG | + | chr8_4:14929831-14929850 | None:intergenic | 40.0% |
| GTATTGGGACCAAGTAATGT+TGG | + | chr8_4:14929925-14929944 | None:intergenic | 40.0% | |
| TTGCCAATATGGACCGTATT+GGG | + | chr8_4:14929940-14929959 | None:intergenic | 40.0% | |
| !! | TTACGAGCTTGTTGCCAATA+TGG | + | chr8_4:14929951-14929970 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGGAAGAAGTATT+TGG | - | chr8_4:14930136-14930155 | Msa1315460:intron | 40.0% |
| CTTAATGGGGTCCTCAATAT+TGG | - | chr8_4:14930224-14930243 | Msa1315460:intron | 40.0% | |
| TAATGGGGTCCTCAATATTG+GGG | - | chr8_4:14930226-14930245 | Msa1315460:intron | 40.0% | |
| TGTGAAGAGAATGAAGGCTT+TGG | - | chr8_4:14930289-14930308 | Msa1315460:intron | 40.0% | |
| GTGAAGAGAATGAAGGCTTT+GGG | - | chr8_4:14930290-14930309 | Msa1315460:intron | 40.0% | |
| GTTTATGGAACATGTGTTGG+AGG | - | chr8_4:14930328-14930347 | Msa1315460:intron | 40.0% | |
| GTCTTGAAGTCAAACTTGAG+AGG | - | chr8_4:14930435-14930454 | Msa1315460:CDS | 40.0% | |
| ! | CGGAGTGTTAAAACTCGATT+TGG | + | chr8_4:14930662-14930681 | None:intergenic | 40.0% |
| ! | CCTCTGAGTTAACACGATTT+TGG | + | chr8_4:14930712-14930731 | None:intergenic | 40.0% |
| CCAAAATCGTGTTAACTCAG+AGG | - | chr8_4:14930709-14930728 | Msa1315460:CDS | 40.0% | |
| TCAGAGGTAAACTCGATTTC+TGG | - | chr8_4:14930725-14930744 | Msa1315460:CDS | 40.0% | |
| !! | CGATTTCTGGTAAAATCGGA+AGG | - | chr8_4:14930738-14930757 | Msa1315460:CDS | 40.0% |
| GAACTCGGAGAAGAAAGAAA+AGG | + | chr8_4:14930924-14930943 | None:intergenic | 40.0% | |
| !!! | GGACAGCGTCATTTGTTTTG+AGG | + | chr8_4:14929851-14929870 | None:intergenic | 45.0% |
| GTTGCCAATATGGACCGTAT+TGG | + | chr8_4:14929941-14929960 | None:intergenic | 45.0% | |
| ! | TGGAGGAGCACATTGAAAGA+AGG | - | chr8_4:14930345-14930364 | Msa1315460:intron | 45.0% |
| GAAGTCAAACTTGAGAGGCA+CGG | - | chr8_4:14930440-14930459 | Msa1315460:CDS | 45.0% | |
| ! | CGGAGTCAAAGCTTTTACTC+AGG | - | chr8_4:14930460-14930479 | Msa1315460:CDS | 45.0% |
| !!! | GGACAGCGTCATTTGTTTTG+AGG | + | chr8_4:14929851-14929870 | None:intergenic | 45.0% |
| GTTGCCAATATGGACCGTAT+TGG | + | chr8_4:14929941-14929960 | None:intergenic | 45.0% | |
| ! | TGGAGGAGCACATTGAAAGA+AGG | - | chr8_4:14930345-14930364 | Msa1315460:intron | 45.0% |
| GAAGTCAAACTTGAGAGGCA+CGG | - | chr8_4:14930440-14930459 | Msa1315460:CDS | 45.0% | |
| ! | CGGAGTCAAAGCTTTTACTC+AGG | - | chr8_4:14930460-14930479 | Msa1315460:CDS | 45.0% |
| ACAAATGACGCTGTCCTTGC+TGG | - | chr8_4:14929855-14929874 | Msa1315460:CDS | 50.0% | |
| CAAATGACGCTGTCCTTGCT+GGG | - | chr8_4:14929856-14929875 | Msa1315460:CDS | 50.0% | |
| GGTCCCAATACGGTCCATAT+TGG | - | chr8_4:14929934-14929953 | Msa1315460:intron | 50.0% | |
| ACAAATGACGCTGTCCTTGC+TGG | - | chr8_4:14929855-14929874 | Msa1315460:CDS | 50.0% | |
| CAAATGACGCTGTCCTTGCT+GGG | - | chr8_4:14929856-14929875 | Msa1315460:CDS | 50.0% | |
| GGTCCCAATACGGTCCATAT+TGG | - | chr8_4:14929934-14929953 | Msa1315460:intron | 50.0% | |
| ACCACCACCGTAACCCTAAC+CGG | + | chr8_4:14930972-14930991 | None:intergenic | 55.0% | |
| ACCACCACCGTAACCCTAAC+CGG | + | chr8_4:14930972-14930991 | None:intergenic | 55.0% | |
| ATGACGCTGTCCTTGCTGGG+CGG | - | chr8_4:14929859-14929878 | Msa1315460:CDS | 60.0% | |
| AGAATTTGGGCCGCCCAGCA+AGG | + | chr8_4:14929872-14929891 | None:intergenic | 60.0% | |
| ! | CATGAACAAGGGTGCGACGC+CGG | - | chr8_4:14930950-14930969 | Msa1315460:five_prime_UTR | 60.0% |
| ! | TGCGACGCCGGTTAGGGTTA+CGG | - | chr8_4:14930962-14930981 | Msa1315460:five_prime_UTR | 60.0% |
| ATGACGCTGTCCTTGCTGGG+CGG | - | chr8_4:14929859-14929878 | Msa1315460:CDS | 60.0% | |
| AGAATTTGGGCCGCCCAGCA+AGG | + | chr8_4:14929872-14929891 | None:intergenic | 60.0% | |
| ! | CATGAACAAGGGTGCGACGC+CGG | - | chr8_4:14930950-14930969 | Msa1315460:five_prime_UTR | 60.0% |
| ! | TGCGACGCCGGTTAGGGTTA+CGG | - | chr8_4:14930962-14930981 | Msa1315460:five_prime_UTR | 60.0% |
| GGGCGGCCCAAATTCTCTGC+TGG | - | chr8_4:14929876-14929895 | Msa1315460:CDS | 65.0% | |
| ! | ACAAGGGTGCGACGCCGGTT+AGG | - | chr8_4:14930955-14930974 | Msa1315460:five_prime_UTR | 65.0% |
| ! | CAAGGGTGCGACGCCGGTTA+GGG | - | chr8_4:14930956-14930975 | Msa1315460:five_prime_UTR | 65.0% |
| ! | GACGCCGGTTAGGGTTACGG+TGG | - | chr8_4:14930965-14930984 | Msa1315460:five_prime_UTR | 65.0% |
| GCCGGTTAGGGTTACGGTGG+TGG | - | chr8_4:14930968-14930987 | Msa1315460:five_prime_UTR | 65.0% | |
| GGGCGGCCCAAATTCTCTGC+TGG | - | chr8_4:14929876-14929895 | Msa1315460:CDS | 65.0% | |
| ! | ACAAGGGTGCGACGCCGGTT+AGG | - | chr8_4:14930955-14930974 | Msa1315460:five_prime_UTR | 65.0% |
| ! | CAAGGGTGCGACGCCGGTTA+GGG | - | chr8_4:14930956-14930975 | Msa1315460:five_prime_UTR | 65.0% |
| ! | GACGCCGGTTAGGGTTACGG+TGG | - | chr8_4:14930965-14930984 | Msa1315460:five_prime_UTR | 65.0% |
| GCCGGTTAGGGTTACGGTGG+TGG | - | chr8_4:14930968-14930987 | Msa1315460:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14929825 | 14931037 | 14929825 | ID=Msa1315460;Name=Msa1315460 |
| chr8_4 | mRNA | 14929825 | 14931037 | 14929825 | ID=Msa1315460-mRNA-1;Parent=Msa1315460;Name=Msa1315460-mRNA-1;_AED=0.29;_eAED=0.29;_QI=147|0|0.5|0.5|1|1|2|0|195 |
| chr8_4 | exon | 14929825 | 14929902 | 14929825 | ID=Msa1315460-mRNA-1:exon:5686;Parent=Msa1315460-mRNA-1 |
| chr8_4 | exon | 14930381 | 14931037 | 14930381 | ID=Msa1315460-mRNA-1:exon:5685;Parent=Msa1315460-mRNA-1 |
| chr8_4 | five_prime_UTR | 14930891 | 14931037 | 14930891 | ID=Msa1315460-mRNA-1:five_prime_utr;Parent=Msa1315460-mRNA-1 |
| chr8_4 | CDS | 14930381 | 14930890 | 14930381 | ID=Msa1315460-mRNA-1:cds;Parent=Msa1315460-mRNA-1 |
| chr8_4 | CDS | 14929825 | 14929902 | 14929825 | ID=Msa1315460-mRNA-1:cds;Parent=Msa1315460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
