Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1237090 | XP_013444712.1 | 95.103 | 388 | 18 | 1 | 9 | 395 | 1 | 388 | 0.0 | 754 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1237090 | sp|Q9M153|GDL61_ARATH | 63.333 | 360 | 117 | 5 | 38 | 389 | 28 | 380 | 1.05e-159 | 457 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0199960 | Msa1237090 | 0.826181 | 3.123824e-54 | -8.615850e-47 |
Msa1237090 | Msa1278160 | 0.890203 | 1.218010e-73 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1237090 | MtrunA17_Chr8g0347751 | 95.103 | 388 | 18 | 1 | 9 | 395 | 1 | 388 | 0.0 | 754 |
Msa1237090 | MtrunA17_Chr7g0275291 | 64.304 | 381 | 117 | 3 | 22 | 394 | 11 | 380 | 0.0 | 512 |
Msa1237090 | MtrunA17_Chr7g0254461 | 42.010 | 388 | 203 | 9 | 15 | 389 | 13 | 391 | 1.06e-101 | 306 |
Msa1237090 | MtrunA17_Chr1g0159971 | 41.005 | 378 | 206 | 4 | 20 | 389 | 23 | 391 | 1.47e-97 | 296 |
Msa1237090 | MtrunA17_Chr8g0381581 | 39.481 | 385 | 209 | 4 | 20 | 387 | 8 | 385 | 3.02e-97 | 295 |
Msa1237090 | MtrunA17_Chr1g0159991 | 40.617 | 389 | 214 | 4 | 9 | 389 | 1 | 380 | 2.32e-96 | 293 |
Msa1237090 | MtrunA17_Chr7g0226941 | 39.788 | 377 | 204 | 7 | 24 | 389 | 14 | 378 | 2.25e-93 | 285 |
Msa1237090 | MtrunA17_Chr1g0160101 | 40.106 | 379 | 209 | 5 | 20 | 389 | 18 | 387 | 1.38e-91 | 281 |
Msa1237090 | MtrunA17_Chr1g0160031 | 39.031 | 392 | 220 | 5 | 6 | 389 | 1 | 381 | 1.52e-90 | 278 |
Msa1237090 | MtrunA17_Chr1g0160011 | 39.440 | 393 | 218 | 5 | 6 | 389 | 1 | 382 | 1.57e-90 | 278 |
Msa1237090 | MtrunA17_Chr7g0226931 | 39.946 | 373 | 197 | 6 | 40 | 391 | 34 | 400 | 1.61e-90 | 278 |
Msa1237090 | MtrunA17_Chr7g0226911 | 39.433 | 388 | 204 | 9 | 22 | 391 | 12 | 386 | 9.34e-90 | 276 |
Msa1237090 | MtrunA17_Chr1g0159981 | 38.933 | 375 | 212 | 4 | 23 | 389 | 25 | 390 | 2.78e-87 | 270 |
Msa1237090 | MtrunA17_Chr6g0450701 | 36.269 | 386 | 233 | 6 | 9 | 389 | 1 | 378 | 3.99e-82 | 256 |
Msa1237090 | MtrunA17_Chr7g0273101 | 40.336 | 357 | 185 | 8 | 41 | 383 | 26 | 368 | 7.04e-81 | 253 |
Msa1237090 | MtrunA17_Chr1g0191461 | 36.927 | 371 | 208 | 8 | 21 | 380 | 11 | 366 | 1.61e-75 | 239 |
Msa1237090 | MtrunA17_Chr6g0450711 | 35.854 | 357 | 219 | 4 | 35 | 389 | 113 | 461 | 2.21e-74 | 238 |
Msa1237090 | MtrunA17_Chr8g0352901 | 37.921 | 356 | 208 | 6 | 40 | 389 | 24 | 372 | 5.54e-74 | 235 |
Msa1237090 | MtrunA17_Chr7g0271551 | 40.116 | 344 | 181 | 9 | 45 | 383 | 37 | 360 | 9.89e-73 | 231 |
Msa1237090 | MtrunA17_Chr6g0450731 | 36.292 | 383 | 220 | 9 | 9 | 389 | 1 | 361 | 9.23e-72 | 229 |
Msa1237090 | MtrunA17_Chr6g0450721 | 33.607 | 366 | 224 | 4 | 24 | 389 | 13 | 359 | 5.21e-67 | 216 |
Msa1237090 | MtrunA17_Chr2g0283531 | 38.630 | 365 | 190 | 11 | 33 | 382 | 20 | 365 | 1.25e-66 | 216 |
Msa1237090 | MtrunA17_Chr2g0283501 | 35.310 | 371 | 207 | 10 | 28 | 383 | 15 | 367 | 7.92e-63 | 206 |
Msa1237090 | MtrunA17_Chr2g0283481 | 37.666 | 377 | 201 | 13 | 21 | 383 | 26 | 382 | 5.98e-62 | 204 |
Msa1237090 | MtrunA17_Chr2g0317271 | 35.180 | 361 | 192 | 12 | 33 | 381 | 19 | 349 | 1.14e-56 | 189 |
Msa1237090 | MtrunA17_Chr3g0104821 | 35.328 | 351 | 202 | 11 | 42 | 381 | 42 | 378 | 1.17e-56 | 190 |
Msa1237090 | MtrunA17_Chr2g0317261 | 35.180 | 361 | 192 | 12 | 33 | 381 | 19 | 349 | 5.41e-56 | 187 |
Msa1237090 | MtrunA17_Chr0c01g0489581 | 34.626 | 361 | 194 | 12 | 33 | 381 | 19 | 349 | 9.19e-56 | 187 |
Msa1237090 | MtrunA17_Chr3g0112821 | 36.134 | 357 | 199 | 14 | 34 | 381 | 20 | 356 | 1.87e-55 | 186 |
Msa1237090 | MtrunA17_Chr0c01g0489571 | 34.626 | 361 | 194 | 12 | 33 | 381 | 19 | 349 | 3.93e-55 | 185 |
Msa1237090 | MtrunA17_Chr3g0096551 | 36.022 | 372 | 198 | 13 | 33 | 381 | 18 | 372 | 1.03e-54 | 185 |
Msa1237090 | MtrunA17_Chr2g0283511 | 36.034 | 358 | 191 | 14 | 49 | 389 | 36 | 372 | 1.23e-53 | 182 |
Msa1237090 | MtrunA17_Chr3g0112691 | 35.955 | 356 | 204 | 12 | 34 | 381 | 20 | 359 | 1.99e-53 | 181 |
Msa1237090 | MtrunA17_Chr2g0301581 | 33.600 | 375 | 201 | 12 | 22 | 382 | 12 | 352 | 5.56e-53 | 180 |
Msa1237090 | MtrunA17_Chr3g0093031 | 34.711 | 363 | 201 | 13 | 34 | 381 | 20 | 361 | 5.59e-53 | 180 |
Msa1237090 | MtrunA17_Chr2g0301541 | 33.600 | 375 | 201 | 12 | 22 | 382 | 12 | 352 | 1.49e-52 | 179 |
Msa1237090 | MtrunA17_Chr4g0057991 | 30.000 | 390 | 233 | 11 | 9 | 383 | 5 | 369 | 9.46e-50 | 172 |
Msa1237090 | MtrunA17_Chr8g0339251 | 33.956 | 321 | 185 | 8 | 40 | 354 | 24 | 323 | 2.48e-48 | 167 |
Msa1237090 | MtrunA17_Chr8g0344941 | 32.804 | 378 | 194 | 15 | 19 | 373 | 15 | 355 | 4.11e-43 | 154 |
Msa1237090 | MtrunA17_Chr8g0344931 | 31.117 | 376 | 210 | 8 | 29 | 391 | 22 | 361 | 2.65e-37 | 138 |
Msa1237090 | MtrunA17_Chr2g0283541 | 38.974 | 195 | 115 | 4 | 190 | 382 | 99 | 291 | 1.32e-35 | 132 |
Msa1237090 | MtrunA17_Chr2g0301641 | 30.137 | 365 | 204 | 15 | 43 | 388 | 42 | 374 | 1.54e-35 | 134 |
Msa1237090 | MtrunA17_Chr3g0131321 | 30.513 | 390 | 212 | 12 | 8 | 376 | 2 | 353 | 6.95e-35 | 132 |
Msa1237090 | MtrunA17_Chr5g0432101 | 30.376 | 372 | 195 | 16 | 42 | 389 | 31 | 362 | 1.29e-34 | 131 |
Msa1237090 | MtrunA17_Chr2g0301591 | 31.908 | 304 | 164 | 9 | 22 | 314 | 12 | 283 | 1.31e-34 | 129 |
Msa1237090 | MtrunA17_Chr8g0349321 | 28.406 | 345 | 209 | 8 | 44 | 379 | 37 | 352 | 2.04e-34 | 130 |
Msa1237090 | MtrunA17_Chr5g0396511 | 29.462 | 353 | 209 | 13 | 46 | 386 | 48 | 372 | 5.54e-34 | 130 |
Msa1237090 | MtrunA17_Chr3g0104831 | 31.183 | 279 | 172 | 9 | 109 | 381 | 33 | 297 | 2.67e-33 | 126 |
Msa1237090 | MtrunA17_Chr2g0294301 | 28.861 | 395 | 224 | 14 | 4 | 380 | 1 | 356 | 3.47e-33 | 127 |
Msa1237090 | MtrunA17_Chr2g0301551 | 30.065 | 306 | 169 | 10 | 90 | 383 | 37 | 309 | 4.43e-33 | 126 |
Msa1237090 | MtrunA17_Chr2g0330781 | 29.310 | 348 | 207 | 10 | 44 | 379 | 31 | 351 | 1.63e-32 | 125 |
Msa1237090 | MtrunA17_Chr7g0275011 | 27.642 | 369 | 223 | 13 | 24 | 377 | 12 | 351 | 2.09e-32 | 125 |
Msa1237090 | MtrunA17_Chr8g0374101 | 29.006 | 362 | 217 | 13 | 46 | 391 | 39 | 376 | 3.02e-32 | 125 |
Msa1237090 | MtrunA17_Chr2g0301571 | 30.065 | 306 | 167 | 11 | 90 | 382 | 37 | 308 | 4.37e-32 | 123 |
Msa1237090 | MtrunA17_Chr8g0349341 | 27.424 | 361 | 223 | 8 | 27 | 377 | 19 | 350 | 5.19e-32 | 124 |
Msa1237090 | MtrunA17_Chr3g0086641 | 27.473 | 364 | 213 | 13 | 46 | 391 | 40 | 370 | 2.55e-31 | 122 |
Msa1237090 | MtrunA17_Chr8g0349331 | 27.826 | 345 | 181 | 6 | 44 | 379 | 35 | 320 | 9.60e-31 | 120 |
Msa1237090 | MtrunA17_Chr2g0285061 | 26.316 | 399 | 234 | 13 | 18 | 391 | 2 | 365 | 1.15e-30 | 120 |
Msa1237090 | MtrunA17_Chr3g0099161 | 27.979 | 386 | 226 | 13 | 8 | 376 | 60 | 410 | 1.16e-30 | 121 |
Msa1237090 | MtrunA17_Chr7g0275021 | 28.415 | 366 | 214 | 14 | 28 | 377 | 18 | 351 | 1.67e-30 | 120 |
Msa1237090 | MtrunA17_Chr8g0341001 | 28.571 | 343 | 206 | 10 | 44 | 374 | 32 | 347 | 2.01e-30 | 119 |
Msa1237090 | MtrunA17_Chr1g0189931 | 30.086 | 349 | 200 | 13 | 43 | 377 | 31 | 349 | 3.05e-30 | 119 |
Msa1237090 | MtrunA17_Chr2g0320671 | 27.978 | 361 | 194 | 10 | 44 | 379 | 30 | 349 | 4.58e-30 | 118 |
Msa1237090 | MtrunA17_Chr1g0189901 | 29.226 | 349 | 203 | 13 | 43 | 377 | 30 | 348 | 6.13e-30 | 118 |
Msa1237090 | MtrunA17_Chr5g0438641 | 26.857 | 350 | 212 | 10 | 44 | 379 | 32 | 351 | 6.66e-30 | 118 |
Msa1237090 | MtrunA17_Chr3g0099151 | 28.721 | 383 | 222 | 14 | 11 | 376 | 58 | 406 | 1.02e-29 | 119 |
Msa1237090 | MtrunA17_Chr3g0077571 | 25.798 | 376 | 237 | 11 | 27 | 391 | 13 | 357 | 5.34e-29 | 115 |
Msa1237090 | MtrunA17_Chr1g0178931 | 26.506 | 332 | 194 | 9 | 45 | 365 | 38 | 330 | 6.87e-29 | 115 |
Msa1237090 | MtrunA17_Chr8g0380041 | 26.567 | 335 | 211 | 8 | 46 | 371 | 33 | 341 | 7.04e-29 | 115 |
Msa1237090 | MtrunA17_Chr8g0349301 | 28.472 | 288 | 175 | 7 | 45 | 327 | 38 | 299 | 2.79e-28 | 113 |
Msa1237090 | MtrunA17_Chr1g0156891 | 27.660 | 376 | 226 | 13 | 20 | 380 | 19 | 363 | 3.70e-28 | 113 |
Msa1237090 | MtrunA17_Chr5g0444401 | 26.361 | 349 | 213 | 10 | 44 | 377 | 28 | 347 | 7.46e-28 | 112 |
Msa1237090 | MtrunA17_Chr7g0275001 | 26.849 | 365 | 223 | 11 | 26 | 377 | 10 | 343 | 1.11e-27 | 112 |
Msa1237090 | MtrunA17_Chr4g0068441 | 26.478 | 389 | 239 | 13 | 4 | 380 | 3 | 356 | 1.38e-27 | 112 |
Msa1237090 | MtrunA17_Chr3g0120861 | 26.437 | 348 | 216 | 10 | 45 | 380 | 39 | 358 | 1.55e-27 | 112 |
Msa1237090 | MtrunA17_Chr4g0017431 | 26.796 | 362 | 222 | 13 | 44 | 391 | 31 | 363 | 1.55e-27 | 112 |
Msa1237090 | MtrunA17_Chr1g0178941 | 26.331 | 338 | 199 | 10 | 43 | 365 | 39 | 341 | 2.11e-27 | 111 |
Msa1237090 | MtrunA17_Chr1g0156911 | 28.022 | 364 | 221 | 13 | 19 | 370 | 12 | 346 | 2.48e-27 | 111 |
Msa1237090 | MtrunA17_Chr5g0438631 | 24.513 | 359 | 235 | 11 | 27 | 374 | 10 | 343 | 5.35e-27 | 110 |
Msa1237090 | MtrunA17_Chr5g0438621 | 24.377 | 361 | 232 | 11 | 27 | 374 | 12 | 344 | 1.23e-26 | 109 |
Msa1237090 | MtrunA17_Chr2g0294311 | 25.326 | 383 | 233 | 16 | 21 | 380 | 9 | 361 | 2.05e-26 | 108 |
Msa1237090 | MtrunA17_Chr5g0405821 | 25.937 | 347 | 215 | 11 | 48 | 380 | 47 | 365 | 2.64e-26 | 108 |
Msa1237090 | MtrunA17_Chr8g0371481 | 26.404 | 356 | 219 | 11 | 39 | 380 | 36 | 362 | 2.68e-26 | 108 |
Msa1237090 | MtrunA17_Chr1g0156921 | 26.190 | 378 | 229 | 12 | 17 | 374 | 9 | 356 | 3.37e-26 | 108 |
Msa1237090 | MtrunA17_Chr3g0099231 | 26.836 | 354 | 202 | 13 | 44 | 376 | 28 | 345 | 1.19e-25 | 107 |
Msa1237090 | MtrunA17_Chr1g0182811 | 27.596 | 366 | 221 | 12 | 27 | 377 | 16 | 352 | 1.81e-25 | 106 |
Msa1237090 | MtrunA17_Chr2g0283191 | 27.246 | 345 | 198 | 15 | 44 | 365 | 38 | 352 | 2.31e-25 | 105 |
Msa1237090 | MtrunA17_Chr3g0105401 | 26.146 | 371 | 224 | 14 | 23 | 375 | 6 | 344 | 3.02e-25 | 105 |
Msa1237090 | MtrunA17_Chr8g0371491 | 25.897 | 390 | 226 | 13 | 18 | 380 | 3 | 356 | 9.45e-25 | 103 |
Msa1237090 | MtrunA17_Chr3g0142921 | 27.193 | 342 | 203 | 12 | 39 | 365 | 31 | 341 | 1.81e-24 | 103 |
Msa1237090 | MtrunA17_Chr4g0046151 | 25.587 | 383 | 227 | 15 | 20 | 376 | 16 | 366 | 2.91e-24 | 102 |
Msa1237090 | MtrunA17_Chr7g0274991 | 25.337 | 371 | 233 | 12 | 22 | 377 | 9 | 350 | 3.18e-24 | 102 |
Msa1237090 | MtrunA17_Chr5g0434621 | 25.731 | 342 | 200 | 12 | 48 | 371 | 29 | 334 | 3.52e-24 | 102 |
Msa1237090 | MtrunA17_Chr7g0266061 | 27.035 | 344 | 190 | 15 | 41 | 365 | 35 | 336 | 3.84e-24 | 102 |
Msa1237090 | MtrunA17_Chr3g0092131 | 25.895 | 363 | 224 | 14 | 27 | 374 | 5 | 337 | 4.76e-24 | 102 |
Msa1237090 | MtrunA17_Chr3g0077581 | 26.536 | 358 | 226 | 9 | 46 | 391 | 38 | 370 | 4.85e-24 | 102 |
Msa1237090 | MtrunA17_Chr5g0437421 | 25.872 | 344 | 226 | 12 | 44 | 378 | 32 | 355 | 6.08e-24 | 101 |
Msa1237090 | MtrunA17_Chr5g0440501 | 30.734 | 218 | 128 | 7 | 184 | 388 | 41 | 248 | 2.47e-23 | 97.8 |
Msa1237090 | MtrunA17_Chr6g0457921 | 25.872 | 344 | 212 | 11 | 48 | 377 | 33 | 347 | 2.64e-23 | 100 |
Msa1237090 | MtrunA17_Chr7g0215961 | 25.613 | 367 | 221 | 15 | 22 | 377 | 12 | 337 | 3.34e-23 | 99.8 |
Msa1237090 | MtrunA17_Chr8g0371471 | 25.352 | 355 | 223 | 11 | 39 | 380 | 36 | 361 | 1.03e-22 | 98.2 |
Msa1237090 | MtrunA17_Chr4g0027521 | 26.453 | 344 | 214 | 11 | 44 | 374 | 27 | 344 | 1.31e-22 | 97.8 |
Msa1237090 | MtrunA17_Chr4g0008851 | 25.613 | 367 | 227 | 13 | 26 | 377 | 16 | 351 | 1.58e-22 | 97.8 |
Msa1237090 | MtrunA17_Chr4g0060811 | 25.948 | 343 | 210 | 11 | 46 | 374 | 29 | 341 | 2.41e-22 | 97.4 |
Msa1237090 | MtrunA17_Chr5g0420811 | 25.298 | 336 | 206 | 12 | 44 | 370 | 33 | 332 | 3.35e-22 | 96.7 |
Msa1237090 | MtrunA17_Chr3g0085881 | 23.952 | 334 | 209 | 9 | 45 | 370 | 34 | 330 | 3.79e-22 | 96.7 |
Msa1237090 | MtrunA17_Chr1g0189891 | 27.326 | 344 | 211 | 14 | 43 | 377 | 28 | 341 | 1.96e-21 | 94.7 |
Msa1237090 | MtrunA17_Chr1g0156931 | 25.320 | 391 | 247 | 14 | 1 | 379 | 1 | 358 | 4.38e-21 | 93.6 |
Msa1237090 | MtrunA17_Chr1g0156901 | 26.271 | 354 | 208 | 15 | 39 | 374 | 45 | 363 | 7.80e-21 | 93.2 |
Msa1237090 | MtrunA17_Chr5g0405831 | 23.333 | 390 | 247 | 15 | 14 | 380 | 4 | 364 | 8.79e-21 | 92.8 |
Msa1237090 | MtrunA17_Chr4g0027571 | 34.694 | 147 | 87 | 2 | 223 | 369 | 72 | 209 | 6.25e-20 | 87.8 |
Msa1237090 | MtrunA17_Chr7g0229581 | 32.468 | 154 | 95 | 2 | 226 | 379 | 8 | 152 | 1.01e-19 | 85.5 |
Msa1237090 | MtrunA17_Chr3g0142941 | 26.136 | 352 | 211 | 13 | 39 | 374 | 42 | 360 | 1.44e-19 | 89.4 |
Msa1237090 | MtrunA17_Chr2g0284921 | 24.654 | 361 | 215 | 15 | 45 | 386 | 35 | 357 | 3.04e-19 | 88.2 |
Msa1237090 | MtrunA17_Chr2g0285001 | 25.439 | 342 | 201 | 15 | 45 | 370 | 34 | 337 | 3.21e-19 | 88.6 |
Msa1237090 | MtrunA17_Chr3g0085231 | 24.022 | 358 | 218 | 9 | 44 | 388 | 31 | 347 | 4.31e-19 | 87.8 |
Msa1237090 | MtrunA17_Chr3g0104801 | 52.222 | 90 | 36 | 3 | 42 | 125 | 42 | 130 | 5.81e-19 | 84.0 |
Msa1237090 | MtrunA17_Chr2g0301561 | 28.814 | 236 | 140 | 8 | 90 | 315 | 37 | 254 | 4.55e-18 | 83.2 |
Msa1237090 | MtrunA17_Chr8g0380031 | 23.754 | 341 | 215 | 10 | 45 | 376 | 85 | 389 | 4.35e-17 | 82.4 |
Msa1237090 | MtrunA17_Chr1g0157001 | 24.561 | 342 | 209 | 12 | 45 | 374 | 44 | 348 | 4.52e-17 | 82.0 |
Msa1237090 | MtrunA17_Chr6g0455661 | 25.431 | 232 | 148 | 6 | 170 | 391 | 256 | 472 | 5.26e-17 | 82.4 |
Msa1237090 | MtrunA17_Chr6g0459921 | 25.339 | 221 | 142 | 5 | 179 | 391 | 156 | 361 | 4.14e-16 | 79.0 |
Msa1237090 | MtrunA17_Chr2g0284991 | 22.554 | 368 | 226 | 14 | 22 | 370 | 9 | 336 | 1.15e-15 | 77.8 |
Msa1237090 | MtrunA17_Chr8g0370981 | 24.675 | 385 | 217 | 15 | 45 | 379 | 45 | 406 | 2.99e-15 | 77.0 |
Msa1237090 | MtrunA17_Chr2g0284951 | 24.118 | 340 | 203 | 12 | 45 | 370 | 34 | 332 | 1.19e-14 | 74.7 |
Msa1237090 | MtrunA17_Chr8g0370961 | 22.553 | 235 | 163 | 6 | 145 | 376 | 11 | 229 | 1.87e-14 | 72.8 |
Msa1237090 | MtrunA17_Chr8g0370951 | 24.202 | 376 | 234 | 14 | 22 | 377 | 9 | 353 | 2.26e-14 | 73.9 |
Msa1237090 | MtrunA17_Chr1g0189911 | 29.787 | 141 | 89 | 4 | 237 | 377 | 1 | 131 | 4.51e-13 | 66.6 |
Msa1237090 | MtrunA17_Chr1g0178961 | 24.339 | 189 | 124 | 5 | 184 | 365 | 25 | 201 | 1.01e-12 | 67.0 |
Msa1237090 | MtrunA17_Chr7g0273111 | 48.438 | 64 | 32 | 1 | 30 | 92 | 21 | 84 | 2.31e-11 | 60.1 |
Msa1237090 | MtrunA17_Chr2g0284941 | 23.077 | 377 | 217 | 15 | 22 | 383 | 9 | 327 | 2.46e-11 | 64.7 |
Msa1237090 | MtrunA17_Chr6g0469521 | 30.233 | 129 | 81 | 2 | 226 | 354 | 32 | 151 | 2.57e-11 | 61.6 |
Msa1237090 | MtrunA17_Chr3g0106911 | 47.541 | 61 | 30 | 2 | 321 | 381 | 155 | 213 | 3.86e-11 | 62.4 |
Msa1237090 | MtrunA17_Chr3g0106911 | 34.416 | 154 | 77 | 8 | 69 | 219 | 7 | 139 | 4.75e-11 | 62.4 |
Msa1237090 | MtrunA17_Chr4g0018571 | 26.752 | 157 | 106 | 2 | 223 | 379 | 28 | 175 | 4.35e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1237090 | AT4G01130.1 | 63.333 | 360 | 117 | 5 | 38 | 389 | 28 | 380 | 1.07e-160 | 457 |
Msa1237090 | AT4G01130.2 | 64.748 | 278 | 91 | 4 | 38 | 315 | 28 | 298 | 1.32e-123 | 360 |
Msa1237090 | AT4G01130.3 | 60.133 | 301 | 105 | 5 | 97 | 389 | 1 | 294 | 2.36e-121 | 353 |
Msa1237090 | AT3G26430.1 | 41.053 | 380 | 205 | 5 | 22 | 389 | 6 | 378 | 1.03e-97 | 296 |
Msa1237090 | AT5G14450.1 | 39.796 | 392 | 210 | 7 | 14 | 392 | 11 | 389 | 1.31e-94 | 289 |
Msa1237090 | AT1G67830.1 | 40.608 | 362 | 191 | 4 | 40 | 392 | 26 | 372 | 3.94e-94 | 287 |
Msa1237090 | AT1G56670.1 | 37.726 | 387 | 219 | 7 | 9 | 389 | 1 | 371 | 1.11e-81 | 255 |
Msa1237090 | AT3G27950.1 | 40.000 | 365 | 190 | 9 | 38 | 391 | 26 | 372 | 1.95e-77 | 244 |
Msa1237090 | AT1G09390.1 | 37.143 | 385 | 221 | 8 | 9 | 389 | 1 | 368 | 3.69e-77 | 243 |
Msa1237090 | AT1G54790.3 | 37.772 | 368 | 208 | 8 | 27 | 383 | 14 | 371 | 5.10e-74 | 236 |
Msa1237090 | AT1G54790.1 | 35.890 | 365 | 214 | 7 | 29 | 383 | 16 | 370 | 6.76e-71 | 228 |
Msa1237090 | AT3G05180.1 | 38.177 | 351 | 195 | 7 | 41 | 380 | 33 | 372 | 6.29e-70 | 225 |
Msa1237090 | AT3G62280.1 | 37.168 | 339 | 193 | 5 | 45 | 381 | 37 | 357 | 1.71e-66 | 216 |
Msa1237090 | AT1G54790.2 | 34.439 | 392 | 209 | 9 | 29 | 383 | 16 | 396 | 1.91e-66 | 217 |
Msa1237090 | AT1G31550.2 | 36.623 | 385 | 193 | 15 | 22 | 383 | 15 | 371 | 2.91e-62 | 205 |
Msa1237090 | AT5G45910.1 | 36.667 | 360 | 194 | 10 | 42 | 383 | 28 | 371 | 2.87e-61 | 202 |
Msa1237090 | AT1G28600.1 | 35.753 | 372 | 194 | 14 | 33 | 383 | 19 | 366 | 1.15e-60 | 201 |
Msa1237090 | AT1G28580.1 | 34.805 | 385 | 204 | 13 | 23 | 383 | 12 | 373 | 1.29e-60 | 201 |
Msa1237090 | AT1G28640.1 | 35.025 | 394 | 211 | 11 | 10 | 383 | 3 | 371 | 2.30e-60 | 200 |
Msa1237090 | AT1G28590.1 | 33.166 | 398 | 219 | 12 | 5 | 383 | 3 | 372 | 9.47e-60 | 199 |
Msa1237090 | AT1G31550.1 | 36.198 | 384 | 193 | 15 | 22 | 383 | 15 | 368 | 1.10e-59 | 199 |
Msa1237090 | AT1G28650.1 | 33.676 | 389 | 228 | 8 | 9 | 383 | 1 | 373 | 1.63e-58 | 195 |
Msa1237090 | AT1G28670.1 | 34.010 | 394 | 216 | 11 | 10 | 383 | 3 | 372 | 4.17e-57 | 192 |
Msa1237090 | AT1G28660.1 | 36.247 | 389 | 213 | 13 | 10 | 383 | 3 | 371 | 4.86e-56 | 189 |
Msa1237090 | AT1G28610.2 | 35.294 | 374 | 203 | 15 | 33 | 389 | 19 | 370 | 3.23e-55 | 187 |
Msa1237090 | AT2G27360.1 | 35.135 | 370 | 201 | 11 | 33 | 383 | 21 | 370 | 3.97e-55 | 187 |
Msa1237090 | AT1G28660.2 | 35.733 | 389 | 214 | 13 | 10 | 383 | 3 | 370 | 3.98e-55 | 186 |
Msa1237090 | AT1G56670.2 | 36.422 | 313 | 177 | 7 | 9 | 315 | 1 | 297 | 1.31e-54 | 182 |
Msa1237090 | AT1G28570.1 | 31.937 | 382 | 227 | 13 | 19 | 383 | 5 | 370 | 7.23e-52 | 178 |
Msa1237090 | AT3G48460.1 | 31.328 | 399 | 214 | 13 | 22 | 388 | 8 | 378 | 1.58e-50 | 174 |
Msa1237090 | AT1G28580.2 | 33.876 | 307 | 174 | 9 | 87 | 383 | 5 | 292 | 5.41e-45 | 158 |
Msa1237090 | AT3G62280.2 | 36.604 | 265 | 148 | 5 | 45 | 307 | 37 | 283 | 1.35e-44 | 156 |
Msa1237090 | AT5G40990.1 | 29.820 | 389 | 216 | 13 | 24 | 392 | 23 | 374 | 9.10e-39 | 143 |
Msa1237090 | AT1G53920.1 | 28.934 | 394 | 226 | 13 | 1 | 376 | 7 | 364 | 3.40e-38 | 142 |
Msa1237090 | AT2G23540.1 | 28.846 | 364 | 215 | 11 | 46 | 391 | 50 | 387 | 1.41e-33 | 129 |
Msa1237090 | AT3G14225.1 | 30.398 | 352 | 199 | 11 | 44 | 376 | 37 | 361 | 1.71e-33 | 129 |
Msa1237090 | AT1G53990.1 | 27.979 | 386 | 220 | 13 | 24 | 392 | 21 | 365 | 3.30e-33 | 128 |
Msa1237090 | AT5G15720.1 | 31.014 | 345 | 184 | 12 | 46 | 370 | 32 | 342 | 4.64e-33 | 127 |
Msa1237090 | AT1G53940.2 | 28.767 | 365 | 215 | 11 | 44 | 391 | 39 | 375 | 1.05e-32 | 126 |
Msa1237090 | AT3G14225.2 | 29.598 | 348 | 203 | 11 | 44 | 376 | 37 | 357 | 1.55e-32 | 126 |
Msa1237090 | AT1G06990.1 | 29.023 | 348 | 202 | 11 | 42 | 374 | 35 | 352 | 6.30e-32 | 124 |
Msa1237090 | AT5G08460.1 | 27.348 | 362 | 219 | 10 | 35 | 380 | 40 | 373 | 6.43e-32 | 124 |
Msa1237090 | AT4G26790.1 | 28.045 | 353 | 208 | 11 | 42 | 379 | 27 | 348 | 2.35e-31 | 122 |
Msa1237090 | AT4G26790.2 | 28.045 | 353 | 208 | 11 | 42 | 379 | 27 | 348 | 2.35e-31 | 122 |
Msa1237090 | AT4G10950.2 | 28.940 | 349 | 208 | 13 | 44 | 380 | 71 | 391 | 2.92e-31 | 123 |
Msa1237090 | AT5G03980.1 | 28.729 | 362 | 199 | 14 | 23 | 379 | 9 | 316 | 3.62e-31 | 121 |
Msa1237090 | AT1G28570.3 | 33.333 | 204 | 128 | 4 | 185 | 383 | 7 | 207 | 4.63e-31 | 118 |
Msa1237090 | AT3G50400.1 | 28.767 | 365 | 215 | 13 | 46 | 391 | 36 | 374 | 7.01e-31 | 121 |
Msa1237090 | AT1G28570.2 | 33.333 | 204 | 128 | 4 | 185 | 383 | 98 | 298 | 1.83e-30 | 119 |
Msa1237090 | AT5G03820.1 | 28.571 | 336 | 206 | 10 | 49 | 374 | 38 | 349 | 3.05e-30 | 119 |
Msa1237090 | AT5G03820.2 | 28.571 | 336 | 206 | 10 | 49 | 374 | 66 | 377 | 7.51e-30 | 119 |
Msa1237090 | AT5G22810.1 | 29.915 | 351 | 203 | 12 | 44 | 379 | 34 | 356 | 7.57e-30 | 118 |
Msa1237090 | AT1G29660.1 | 27.869 | 366 | 206 | 11 | 46 | 395 | 34 | 357 | 1.33e-29 | 118 |
Msa1237090 | AT5G41890.1 | 27.882 | 373 | 212 | 13 | 46 | 391 | 33 | 375 | 3.98e-29 | 117 |
Msa1237090 | AT1G71120.1 | 26.667 | 360 | 217 | 10 | 31 | 377 | 18 | 343 | 4.42e-29 | 116 |
Msa1237090 | AT1G29670.1 | 27.298 | 359 | 219 | 11 | 46 | 391 | 34 | 363 | 4.73e-29 | 116 |
Msa1237090 | AT5G03810.1 | 27.083 | 336 | 210 | 9 | 49 | 374 | 35 | 345 | 5.82e-29 | 116 |
Msa1237090 | AT2G42990.1 | 26.816 | 358 | 218 | 11 | 26 | 370 | 12 | 338 | 9.90e-29 | 115 |
Msa1237090 | AT1G29670.2 | 26.562 | 384 | 235 | 12 | 26 | 391 | 77 | 431 | 1.02e-28 | 116 |
Msa1237090 | AT3G16370.1 | 28.125 | 352 | 206 | 11 | 44 | 379 | 30 | 350 | 1.27e-28 | 115 |
Msa1237090 | AT5G33370.1 | 27.005 | 374 | 227 | 12 | 18 | 377 | 6 | 347 | 2.03e-28 | 114 |
Msa1237090 | AT1G54030.1 | 28.190 | 337 | 179 | 12 | 43 | 366 | 51 | 337 | 2.95e-28 | 115 |
Msa1237090 | AT2G19060.1 | 26.234 | 385 | 230 | 13 | 15 | 385 | 1 | 345 | 3.44e-28 | 114 |
Msa1237090 | AT1G71691.2 | 27.762 | 353 | 193 | 10 | 45 | 376 | 56 | 367 | 5.01e-28 | 114 |
Msa1237090 | AT4G10950.1 | 28.367 | 349 | 206 | 14 | 44 | 380 | 71 | 387 | 7.53e-28 | 114 |
Msa1237090 | AT5G18430.1 | 26.203 | 374 | 228 | 11 | 18 | 377 | 8 | 347 | 9.04e-28 | 112 |
Msa1237090 | AT1G75880.1 | 25.773 | 388 | 249 | 11 | 4 | 379 | 12 | 372 | 1.04e-27 | 113 |
Msa1237090 | AT1G75880.2 | 25.515 | 388 | 249 | 11 | 4 | 379 | 12 | 371 | 6.84e-27 | 110 |
Msa1237090 | AT1G75890.2 | 26.374 | 364 | 227 | 11 | 20 | 370 | 23 | 358 | 9.92e-27 | 110 |
Msa1237090 | AT1G75930.1 | 28.342 | 374 | 216 | 14 | 14 | 374 | 1 | 335 | 1.16e-26 | 109 |
Msa1237090 | AT3G04290.1 | 27.011 | 348 | 212 | 12 | 43 | 377 | 28 | 346 | 1.46e-26 | 109 |
Msa1237090 | AT1G75920.2 | 28.075 | 374 | 203 | 13 | 22 | 374 | 7 | 335 | 1.52e-26 | 109 |
Msa1237090 | AT2G04570.1 | 25.946 | 370 | 226 | 12 | 32 | 384 | 12 | 350 | 1.74e-26 | 109 |
Msa1237090 | AT1G75890.3 | 26.374 | 364 | 227 | 11 | 20 | 370 | 52 | 387 | 1.81e-26 | 109 |
Msa1237090 | AT2G19010.2 | 26.562 | 384 | 223 | 12 | 15 | 381 | 28 | 369 | 2.61e-26 | 109 |
Msa1237090 | AT5G42170.1 | 27.536 | 345 | 213 | 10 | 39 | 374 | 45 | 361 | 3.17e-26 | 108 |
Msa1237090 | AT1G75890.1 | 26.757 | 370 | 231 | 11 | 20 | 370 | 23 | 371 | 4.42e-26 | 108 |
Msa1237090 | AT5G45670.1 | 25.905 | 359 | 226 | 11 | 46 | 391 | 31 | 362 | 1.06e-25 | 107 |
Msa1237090 | AT2G19010.1 | 27.078 | 373 | 213 | 13 | 26 | 381 | 9 | 339 | 1.07e-25 | 107 |
Msa1237090 | AT5G15720.3 | 29.054 | 296 | 162 | 9 | 91 | 370 | 48 | 311 | 1.09e-25 | 106 |
Msa1237090 | AT3G53100.1 | 25.895 | 363 | 228 | 9 | 32 | 379 | 12 | 348 | 5.33e-25 | 105 |
Msa1237090 | AT4G18970.2 | 25.414 | 362 | 224 | 11 | 46 | 391 | 30 | 361 | 2.06e-24 | 104 |
Msa1237090 | AT2G19050.1 | 25.862 | 348 | 206 | 13 | 46 | 381 | 33 | 340 | 2.16e-24 | 103 |
Msa1237090 | AT4G18970.1 | 25.414 | 362 | 224 | 11 | 46 | 391 | 30 | 361 | 2.52e-24 | 103 |
Msa1237090 | AT4G28780.1 | 26.648 | 349 | 216 | 12 | 43 | 379 | 30 | 350 | 2.92e-24 | 103 |
Msa1237090 | AT5G45950.1 | 27.219 | 338 | 202 | 14 | 45 | 371 | 41 | 345 | 3.53e-24 | 102 |
Msa1237090 | AT1G20130.1 | 26.050 | 357 | 223 | 11 | 38 | 378 | 198 | 529 | 3.92e-24 | 104 |
Msa1237090 | AT5G03610.1 | 24.855 | 346 | 213 | 8 | 45 | 379 | 44 | 353 | 4.08e-24 | 102 |
Msa1237090 | AT1G20120.1 | 25.915 | 355 | 217 | 12 | 39 | 378 | 73 | 396 | 4.15e-24 | 103 |
Msa1237090 | AT1G20130.2 | 25.779 | 353 | 229 | 9 | 38 | 378 | 178 | 509 | 6.59e-24 | 103 |
Msa1237090 | AT2G31540.1 | 28.011 | 357 | 203 | 15 | 42 | 381 | 33 | 352 | 7.59e-24 | 102 |
Msa1237090 | AT1G54020.2 | 24.931 | 361 | 223 | 10 | 22 | 374 | 11 | 331 | 2.32e-23 | 100 |
Msa1237090 | AT1G59406.1 | 26.667 | 375 | 226 | 13 | 19 | 379 | 7 | 346 | 3.52e-23 | 99.8 |
Msa1237090 | AT1G59030.1 | 26.667 | 375 | 226 | 13 | 19 | 379 | 7 | 346 | 3.52e-23 | 99.8 |
Msa1237090 | AT1G58725.1 | 26.667 | 375 | 226 | 13 | 19 | 379 | 7 | 346 | 3.52e-23 | 99.8 |
Msa1237090 | AT1G33811.1 | 27.072 | 362 | 223 | 14 | 45 | 391 | 35 | 370 | 5.16e-23 | 99.8 |
Msa1237090 | AT2G40250.1 | 23.599 | 339 | 223 | 9 | 44 | 370 | 36 | 350 | 5.35e-23 | 99.8 |
Msa1237090 | AT3G14820.1 | 28.402 | 338 | 200 | 12 | 48 | 374 | 36 | 342 | 5.40e-23 | 99.4 |
Msa1237090 | AT1G75900.1 | 26.301 | 346 | 210 | 11 | 44 | 375 | 43 | 357 | 5.61e-23 | 99.8 |
Msa1237090 | AT1G71250.1 | 25.852 | 352 | 215 | 12 | 44 | 380 | 41 | 361 | 9.40e-23 | 99.0 |
Msa1237090 | AT1G75920.1 | 27.366 | 391 | 199 | 15 | 22 | 374 | 2 | 345 | 9.66e-23 | 98.6 |
Msa1237090 | AT1G53940.1 | 28.772 | 285 | 168 | 8 | 44 | 317 | 39 | 299 | 1.08e-22 | 97.8 |
Msa1237090 | AT1G75920.4 | 27.545 | 334 | 179 | 12 | 60 | 375 | 20 | 308 | 1.11e-22 | 97.8 |
Msa1237090 | AT1G58430.1 | 26.163 | 344 | 216 | 13 | 42 | 373 | 33 | 350 | 1.52e-22 | 98.2 |
Msa1237090 | AT5G45960.1 | 25.893 | 336 | 205 | 12 | 44 | 363 | 47 | 354 | 1.76e-22 | 98.2 |
Msa1237090 | AT5G03600.2 | 27.273 | 374 | 214 | 16 | 18 | 380 | 26 | 352 | 4.07e-22 | 97.1 |
Msa1237090 | AT5G63170.1 | 25.634 | 355 | 204 | 11 | 27 | 365 | 11 | 321 | 6.01e-22 | 96.3 |
Msa1237090 | AT1G20135.1 | 25.876 | 371 | 214 | 16 | 15 | 369 | 1 | 326 | 8.97e-22 | 95.5 |
Msa1237090 | AT5G03600.1 | 28.242 | 347 | 194 | 15 | 45 | 380 | 15 | 317 | 9.00e-22 | 95.5 |
Msa1237090 | AT3G14220.1 | 27.114 | 343 | 201 | 12 | 45 | 376 | 33 | 337 | 1.45e-21 | 95.5 |
Msa1237090 | AT2G30220.1 | 25.824 | 364 | 236 | 12 | 20 | 373 | 9 | 348 | 1.58e-21 | 95.5 |
Msa1237090 | AT1G74460.1 | 25.069 | 363 | 229 | 13 | 26 | 374 | 4 | 337 | 3.63e-21 | 94.4 |
Msa1237090 | AT2G30310.1 | 26.146 | 371 | 230 | 16 | 9 | 365 | 1 | 341 | 4.19e-21 | 94.0 |
Msa1237090 | AT1G71691.1 | 26.230 | 305 | 166 | 9 | 90 | 376 | 3 | 266 | 9.42e-21 | 91.7 |
Msa1237090 | AT2G24560.1 | 25.549 | 364 | 217 | 14 | 27 | 365 | 7 | 341 | 1.07e-20 | 92.8 |
Msa1237090 | AT1G28600.2 | 34.300 | 207 | 99 | 10 | 33 | 223 | 19 | 204 | 1.93e-20 | 89.7 |
Msa1237090 | AT1G54030.2 | 29.119 | 261 | 131 | 10 | 43 | 291 | 51 | 269 | 2.10e-20 | 91.3 |
Msa1237090 | AT1G73610.1 | 25.538 | 372 | 220 | 11 | 19 | 374 | 6 | 336 | 3.10e-20 | 91.3 |
Msa1237090 | AT2G03980.2 | 26.836 | 354 | 197 | 14 | 41 | 372 | 40 | 353 | 3.79e-20 | 91.3 |
Msa1237090 | AT2G03980.3 | 26.836 | 354 | 197 | 14 | 41 | 372 | 40 | 353 | 3.79e-20 | 91.3 |
Msa1237090 | AT2G03980.1 | 26.836 | 354 | 197 | 14 | 41 | 372 | 40 | 353 | 3.79e-20 | 91.3 |
Msa1237090 | AT2G03980.4 | 26.836 | 354 | 197 | 14 | 41 | 372 | 40 | 353 | 3.79e-20 | 91.3 |
Msa1237090 | AT1G23500.1 | 24.528 | 371 | 242 | 8 | 11 | 376 | 2 | 339 | 4.18e-20 | 90.9 |
Msa1237090 | AT5G37690.1 | 23.464 | 358 | 230 | 10 | 26 | 370 | 9 | 335 | 8.06e-20 | 90.5 |
Msa1237090 | AT1G58520.3 | 26.761 | 355 | 206 | 13 | 39 | 379 | 25 | 339 | 1.07e-19 | 89.7 |
Msa1237090 | AT1G58525.1 | 26.761 | 355 | 206 | 13 | 39 | 379 | 25 | 339 | 1.07e-19 | 89.7 |
Msa1237090 | AT1G54010.1 | 25.148 | 338 | 200 | 12 | 44 | 368 | 36 | 333 | 1.61e-19 | 89.7 |
Msa1237090 | AT1G20132.1 | 26.879 | 346 | 207 | 12 | 44 | 374 | 61 | 375 | 2.85e-19 | 89.0 |
Msa1237090 | AT5G15720.2 | 27.778 | 288 | 163 | 10 | 46 | 315 | 32 | 292 | 3.03e-19 | 88.2 |
Msa1237090 | AT4G30140.1 | 24.928 | 345 | 211 | 11 | 46 | 381 | 35 | 340 | 5.04e-19 | 87.8 |
Msa1237090 | AT1G71691.3 | 25.172 | 290 | 164 | 7 | 45 | 315 | 56 | 311 | 1.51e-18 | 85.9 |
Msa1237090 | AT1G75920.3 | 26.146 | 371 | 183 | 13 | 22 | 374 | 7 | 304 | 2.09e-18 | 85.5 |
Msa1237090 | AT1G28610.1 | 33.498 | 203 | 106 | 10 | 33 | 223 | 19 | 204 | 2.48e-18 | 84.3 |
Msa1237090 | AT1G54000.1 | 24.309 | 362 | 221 | 15 | 22 | 370 | 14 | 335 | 6.03e-18 | 85.1 |
Msa1237090 | AT3G09930.2 | 23.599 | 339 | 208 | 9 | 45 | 369 | 40 | 341 | 6.18e-18 | 84.7 |
Msa1237090 | AT3G09930.1 | 23.599 | 339 | 208 | 9 | 45 | 369 | 40 | 341 | 6.18e-18 | 84.7 |
Msa1237090 | AT2G31550.1 | 26.064 | 188 | 123 | 5 | 188 | 373 | 36 | 209 | 1.38e-17 | 81.6 |
Msa1237090 | AT2G36325.1 | 24.069 | 349 | 201 | 11 | 45 | 374 | 48 | 351 | 1.13e-16 | 81.3 |
Msa1237090 | AT5G33370.2 | 25.000 | 320 | 199 | 10 | 18 | 323 | 6 | 298 | 2.03e-16 | 80.1 |
Msa1237090 | AT5G37690.2 | 22.626 | 358 | 225 | 11 | 26 | 370 | 9 | 327 | 4.23e-15 | 76.3 |
Msa1237090 | AT2G19050.2 | 24.715 | 263 | 161 | 9 | 46 | 299 | 33 | 267 | 6.98e-14 | 72.0 |
Msa1237090 | AT3G14210.1 | 25.731 | 342 | 199 | 15 | 44 | 370 | 36 | 337 | 1.53e-13 | 72.0 |
Msa1237090 | AT2G24560.2 | 24.625 | 333 | 202 | 12 | 27 | 334 | 7 | 315 | 2.67e-13 | 70.5 |
Msa1237090 | AT1G54020.1 | 22.535 | 284 | 177 | 8 | 95 | 374 | 1 | 245 | 3.31e-11 | 63.9 |
Msa1237090 | AT1G54020.5 | 22.535 | 284 | 177 | 8 | 95 | 374 | 1 | 245 | 3.31e-11 | 63.9 |
Msa1237090 | AT1G54020.3 | 22.535 | 284 | 177 | 8 | 95 | 374 | 1 | 245 | 3.31e-11 | 63.9 |
Msa1237090 | AT4G16233.1 | 30.303 | 132 | 87 | 3 | 262 | 392 | 4 | 131 | 4.88e-11 | 60.5 |
Find 92 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCAAATATGGACTCAAAT+AGG | 0.208570 | 8_2:-16339668 | None:intergenic |
GATCCTATTGATTGCAAATA+TGG | 0.229073 | 8_2:-16339679 | None:intergenic |
CCTTGATACCAGAGGCAATT+TGG | 0.257541 | 8_2:-16340422 | None:intergenic |
ATTCCTTCACCTGATATCTT+TGG | 0.257780 | 8_2:+16340294 | Msa1237090:CDS |
ATAGCTAAGGCCATTCTTAA+TGG | 0.262867 | 8_2:+16341803 | Msa1237090:CDS |
ATATTGCCACACAATGCTTT+AGG | 0.268393 | 8_2:-16341701 | None:intergenic |
TTTCGTCATCCTACATCTTA+TGG | 0.278515 | 8_2:+16340826 | Msa1237090:CDS |
CATCCCAACTCACATAGTTT+TGG | 0.291777 | 8_2:-16341748 | None:intergenic |
TATTGCCACACAATGCTTTA+GGG | 0.349859 | 8_2:-16341700 | None:intergenic |
TGCAAATATGGACTCAAATA+GGG | 0.358310 | 8_2:-16339667 | None:intergenic |
ACTACATCTTTCTTTGTAAG+TGG | 0.366369 | 8_2:+16339757 | Msa1237090:CDS |
CAATAAGATTTGTCGAACTT+TGG | 0.366823 | 8_2:+16341951 | Msa1237090:three_prime_UTR |
AGTCCATATTTGCAATCAAT+AGG | 0.373537 | 8_2:+16339676 | Msa1237090:CDS |
GGAGATTCAAATTCGGATAC+AGG | 0.374341 | 8_2:+16339206 | Msa1237090:CDS |
AAGCTCCATTAGAGCAGAAT+TGG | 0.374960 | 8_2:-16340803 | None:intergenic |
GGACACCAATTCTGCTCTAA+TGG | 0.377223 | 8_2:+16340798 | Msa1237090:CDS |
ACATTTATGGTATTAAATCT+TGG | 0.377620 | 8_2:+16340601 | Msa1237090:CDS |
CAACTTTGGAGATTCAAATT+CGG | 0.394993 | 8_2:+16339199 | Msa1237090:CDS |
ATAGACTTTCCAAAGATATC+AGG | 0.399393 | 8_2:-16340303 | None:intergenic |
CATAGTTTATGAAGAAGAAA+TGG | 0.406387 | 8_2:-16341842 | None:intergenic |
TTTCAAGGAATATTCAACTT+TGG | 0.420748 | 8_2:+16339185 | Msa1237090:CDS |
CCATGCAATTTACTACCAAT+GGG | 0.422566 | 8_2:-16339043 | None:intergenic |
TTGCCCTTCAAATACAACTA+AGG | 0.425308 | 8_2:+16339791 | Msa1237090:CDS |
AGTTGTATTTGAAGGGCAAA+AGG | 0.427516 | 8_2:-16339787 | None:intergenic |
ACCATGCAATTTACTACCAA+TGG | 0.430391 | 8_2:-16339044 | None:intergenic |
ATAGACATAAATCAATCAAT+AGG | 0.435117 | 8_2:-16341875 | None:intergenic |
CCAAATTGCCTCTGGTATCA+AGG | 0.451098 | 8_2:+16340422 | Msa1237090:CDS |
AATGAGCTCCTTTAAGATGT+TGG | 0.452211 | 8_2:+16339085 | Msa1237090:CDS |
GCACAAGTAGAGGGTTTCAA+TGG | 0.454154 | 8_2:-16340258 | None:intergenic |
TTTGCCTTAGTTGTATTTGA+AGG | 0.454695 | 8_2:-16339795 | None:intergenic |
CCATCTGAAGAACGTCCAAC+TGG | 0.456239 | 8_2:-16339290 | None:intergenic |
GGAAGCTCCACCAAGTATCC+AGG | 0.461563 | 8_2:-16340640 | None:intergenic |
TTTATGAAAATCATGAACCT+TGG | 0.463351 | 8_2:-16339833 | None:intergenic |
TCCATGACCACAACATGCTT+TGG | 0.463440 | 8_2:-16341657 | None:intergenic |
GCAGCCAGTGGTGGTATCAA+TGG | 0.466256 | 8_2:+16340369 | Msa1237090:CDS |
CCAGCACAACCTGGTCCCTA+TGG | 0.472649 | 8_2:+16339248 | Msa1237090:CDS |
AGATGCTTCCCTCATTTATG+TGG | 0.472692 | 8_2:+16340777 | Msa1237090:CDS |
GCAATTTGGTAGATGATTTG+AGG | 0.477959 | 8_2:-16340408 | None:intergenic |
AAACTTGCAGCTGAGGCACT+TGG | 0.478877 | 8_2:+16339640 | Msa1237090:intron |
GGGATGCTACCCTGGATACT+TGG | 0.483418 | 8_2:+16340630 | Msa1237090:CDS |
CCATAGGGACCAGGTTGTGC+TGG | 0.484792 | 8_2:-16339248 | None:intergenic |
ATCATCTACCAAATTGCCTC+TGG | 0.492203 | 8_2:+16340414 | Msa1237090:CDS |
TTGAAATAAGTCATTCCATA+GGG | 0.495907 | 8_2:-16339263 | None:intergenic |
GGTCCAGTGGGATGCTACCC+TGG | 0.496391 | 8_2:+16340622 | Msa1237090:CDS |
CCAGTTGGACGTTCTTCAGA+TGG | 0.509153 | 8_2:+16339290 | Msa1237090:CDS |
TGCTAACAAGATTATAGCTA+AGG | 0.510664 | 8_2:+16341790 | Msa1237090:CDS |
TCTATTTATATGTTCTACAT+TGG | 0.519833 | 8_2:+16340321 | Msa1237090:CDS |
ACCAAAGCATGTTGTGGTCA+TGG | 0.521323 | 8_2:+16341656 | Msa1237090:CDS |
GTTGTATTTGAAGGGCAAAA+GGG | 0.523722 | 8_2:-16339786 | None:intergenic |
TTTGAAATAAGTCATTCCAT+AGG | 0.526980 | 8_2:-16339264 | None:intergenic |
CTTACAAAGAAAGATGTAGT+TGG | 0.531384 | 8_2:-16339754 | None:intergenic |
ATGCTACCCTGGATACTTGG+TGG | 0.535658 | 8_2:+16340633 | Msa1237090:CDS |
TCTAAGTCAGAACTAGTATG+AGG | 0.536472 | 8_2:-16340661 | None:intergenic |
GCATGTTGTGGTCATGGAGG+GGG | 0.536482 | 8_2:+16341662 | Msa1237090:CDS |
TTGCCTTAGTTGTATTTGAA+GGG | 0.537401 | 8_2:-16339794 | None:intergenic |
CAAAACTATGTGAGTTGGGA+TGG | 0.538942 | 8_2:+16341749 | Msa1237090:CDS |
AAGCATGTTGTGGTCATGGA+GGG | 0.551557 | 8_2:+16341660 | Msa1237090:CDS |
ACTTAGTGAGCCATTAAGAA+TGG | 0.555401 | 8_2:-16341813 | None:intergenic |
TATATAATGTGATTCCCCAT+TGG | 0.555805 | 8_2:+16339028 | Msa1237090:five_prime_UTR |
GTATTAAATCTTGGTCCAGT+GGG | 0.556708 | 8_2:+16340610 | Msa1237090:CDS |
TTCTAGGAGTTATATGCACA+AGG | 0.558664 | 8_2:+16340571 | Msa1237090:intron |
CAATCCATTGATACCACCAC+TGG | 0.565648 | 8_2:-16340373 | None:intergenic |
CCCATTGGTAGTAAATTGCA+TGG | 0.566004 | 8_2:+16339043 | Msa1237090:exon |
CACAAGTAGAGGGTTTCAAT+GGG | 0.566749 | 8_2:-16340257 | None:intergenic |
GTTCATGTACCATAAGATGT+AGG | 0.569383 | 8_2:-16340835 | None:intergenic |
AATGCTACAATTCAAATCCA+AGG | 0.569519 | 8_2:+16339816 | Msa1237090:CDS |
AATTGGTGTCCACATAAATG+AGG | 0.573639 | 8_2:-16340786 | None:intergenic |
TATCCAGGGTAGCATCCCAC+TGG | 0.576811 | 8_2:-16340625 | None:intergenic |
GGTATTAAATCTTGGTCCAG+TGG | 0.578970 | 8_2:+16340609 | Msa1237090:CDS |
TTGGACGTTCTTCAGATGGA+AGG | 0.580592 | 8_2:+16339294 | Msa1237090:CDS |
AGCATGTTGTGGTCATGGAG+GGG | 0.581931 | 8_2:+16341661 | Msa1237090:CDS |
TCAGCATTTCCAGCACAACC+TGG | 0.586185 | 8_2:+16339239 | Msa1237090:CDS |
TTCAGATGGAAGGCTCATTG+TGG | 0.589337 | 8_2:+16339304 | Msa1237090:CDS |
CTAGGAGTTATATGCACAAG+GGG | 0.599018 | 8_2:+16340573 | Msa1237090:intron |
ATTGGTGTCCACATAAATGA+GGG | 0.604615 | 8_2:-16340785 | None:intergenic |
GATTCAAATTCGGATACAGG+TGG | 0.612757 | 8_2:+16339209 | Msa1237090:CDS |
CACAGTACCAAAGCATGTTG+TGG | 0.617395 | 8_2:+16341650 | Msa1237090:CDS |
AGTTCTGACTTAGATGAACA+TGG | 0.622431 | 8_2:+16340670 | Msa1237090:CDS |
TAAGTCATTCCATAGGGACC+AGG | 0.627391 | 8_2:-16339257 | None:intergenic |
AAAGCATGTTGTGGTCATGG+AGG | 0.628243 | 8_2:+16341659 | Msa1237090:CDS |
TTTCCAAAGATATCAGGTGA+AGG | 0.628282 | 8_2:-16340297 | None:intergenic |
TCTAGGAGTTATATGCACAA+GGG | 0.628436 | 8_2:+16340572 | Msa1237090:intron |
GAAGCTCCACCAAGTATCCA+GGG | 0.631396 | 8_2:-16340639 | None:intergenic |
TACTCTAACCTTGATACCAG+AGG | 0.652573 | 8_2:-16340430 | None:intergenic |
TTTGACCCTAAAGCATTGTG+TGG | 0.654114 | 8_2:+16341695 | Msa1237090:CDS |
AGTTGGCAAAAGTACAGTAG+AGG | 0.657718 | 8_2:-16339737 | None:intergenic |
AGTTTATGAAGAAGAAATGG+AGG | 0.667290 | 8_2:-16341839 | None:intergenic |
TAGGATCAGACTACACACAT+GGG | 0.670588 | 8_2:+16339695 | Msa1237090:CDS |
ATAGGATCAGACTACACACA+TGG | 0.682252 | 8_2:+16339694 | Msa1237090:CDS |
CATGCAATTTACTACCAATG+GGG | 0.715076 | 8_2:-16339042 | None:intergenic |
AGGATCAGACTACACACATG+GGG | 0.718068 | 8_2:+16339696 | Msa1237090:CDS |
TAGGAGTTATATGCACAAGG+GGG | 0.765966 | 8_2:+16340574 | Msa1237090:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATCATATATAATACATTAA+AGG | - | chr8_2:16340902-16340921 | None:intergenic | 10.0% |
!!! | AATTTCTAAATATTTTTGTT+GGG | + | chr8_2:16341066-16341085 | Msa1237090:intron | 10.0% |
!! | AATTAATATGAATATCAAAT+TGG | - | chr8_2:16341244-16341263 | None:intergenic | 10.0% |
!!! | GATATTTTACTTTTTTTAAA+AGG | - | chr8_2:16341331-16341350 | None:intergenic | 10.0% |
!! | ATATGATATATTTCAAATTT+CGG | + | chr8_2:16341491-16341510 | Msa1237090:intron | 10.0% |
!! | AACAAATAATATATGAAATG+TGG | - | chr8_2:16339617-16339636 | None:intergenic | 15.0% |
!!! | AATCACATTTAAGTTATTTA+TGG | - | chr8_2:16339880-16339899 | None:intergenic | 15.0% |
!! | TTATTAAAATTAACAAACCA+AGG | - | chr8_2:16340865-16340884 | None:intergenic | 15.0% |
!! | TTCAATTGAAATATTTGAAT+TGG | - | chr8_2:16341039-16341058 | None:intergenic | 15.0% |
!! | AAAAATATTTAGAAATTGAG+AGG | - | chr8_2:16341063-16341082 | None:intergenic | 15.0% |
!!! | CAATTTCTAAATATTTTTGT+TGG | + | chr8_2:16341065-16341084 | Msa1237090:intron | 15.0% |
!! | TCTATGTAAATTATATTGTT+TGG | - | chr8_2:16341384-16341403 | None:intergenic | 15.0% |
!! | TATACATAAGAGATAACTAA+CGG | - | chr8_2:16339517-16339536 | None:intergenic | 20.0% |
!! | TATAAATTAGTCAAGAACTA+AGG | - | chr8_2:16340146-16340165 | None:intergenic | 20.0% |
!! | TCTATTTATATGTTCTACAT+TGG | + | chr8_2:16340321-16340340 | Msa1237090:CDS | 20.0% |
!!! | TGGATGTTGTATATTATTTT+AGG | + | chr8_2:16340467-16340486 | Msa1237090:intron | 20.0% |
!! | ACATTTATGGTATTAAATCT+TGG | + | chr8_2:16340601-16340620 | Msa1237090:CDS | 20.0% |
!! | GTTCATTTATAATGACTAAA+AGG | - | chr8_2:16340928-16340947 | None:intergenic | 20.0% |
!!! | TGAAGTTTAGAACATTTATA+GGG | + | chr8_2:16341185-16341204 | Msa1237090:intron | 20.0% |
!! | TTAAGTCAGAAATATGATTA+AGG | - | chr8_2:16341295-16341314 | None:intergenic | 20.0% |
!!! | TACAACATGAGTTTTTTTAT+AGG | - | chr8_2:16341446-16341465 | None:intergenic | 20.0% |
!!! | ATCATATTATTTTATGCATG+TGG | - | chr8_2:16341478-16341497 | None:intergenic | 20.0% |
!! | ATAGACATAAATCAATCAAT+AGG | - | chr8_2:16341878-16341897 | None:intergenic | 20.0% |
! | TTTCAAGGAATATTCAACTT+TGG | + | chr8_2:16339185-16339204 | Msa1237090:CDS | 25.0% |
! | TTGAAATAAGTCATTCCATA+GGG | - | chr8_2:16339266-16339285 | None:intergenic | 25.0% |
!! | TTTGAAATAAGTCATTCCAT+AGG | - | chr8_2:16339267-16339286 | None:intergenic | 25.0% |
! | ACTTATTTCAAAAAACCAGT+TGG | + | chr8_2:16339275-16339294 | Msa1237090:CDS | 25.0% |
!!! | ATTGTGGATTTTTTAGGTAA+TGG | + | chr8_2:16339320-16339339 | Msa1237090:intron | 25.0% |
! | ACCTCAAATAATATTGCATT+CGG | - | chr8_2:16339398-16339417 | None:intergenic | 25.0% |
! | TCAATGTTTGAATTTCGATT+GGG | - | chr8_2:16339450-16339469 | None:intergenic | 25.0% |
! | ATCAATGTTTGAATTTCGAT+TGG | - | chr8_2:16339451-16339470 | None:intergenic | 25.0% |
! | ATACATAAGAGATAACTAAC+GGG | - | chr8_2:16339516-16339535 | None:intergenic | 25.0% |
! | TTTATGAAAATCATGAACCT+TGG | - | chr8_2:16339836-16339855 | None:intergenic | 25.0% |
!! | GTTCATGATTTTCATAAAAG+AGG | + | chr8_2:16339838-16339857 | Msa1237090:CDS | 25.0% |
!!! | ATATATTTCTAGTCCCTATT+AGG | - | chr8_2:16340181-16340200 | None:intergenic | 25.0% |
! | GTTGAATATACGAAATTTCT+AGG | + | chr8_2:16340555-16340574 | Msa1237090:intron | 25.0% |
! | AAAATTAACAAACCAAGGAA+AGG | - | chr8_2:16340860-16340879 | None:intergenic | 25.0% |
!!! | AATTGCTCACTTTTTGAATT+CGG | - | chr8_2:16341163-16341182 | None:intergenic | 25.0% |
!! | GTGAAGTTTAGAACATTTAT+AGG | + | chr8_2:16341184-16341203 | Msa1237090:intron | 25.0% |
!!! | GTTACAAGTAGTTATTTCTA+AGG | + | chr8_2:16341534-16341553 | Msa1237090:intron | 25.0% |
! | CATAGTTTATGAAGAAGAAA+TGG | - | chr8_2:16341845-16341864 | None:intergenic | 25.0% |
TATATAATGTGATTCCCCAT+TGG | + | chr8_2:16339028-16339047 | Msa1237090:five_prime_UTR | 30.0% | |
! | TGCATTTTCCAACATCTTAA+AGG | - | chr8_2:16339096-16339115 | None:intergenic | 30.0% |
! | CAACTTTGGAGATTCAAATT+CGG | + | chr8_2:16339199-16339218 | Msa1237090:CDS | 30.0% |
ATAATATTGCATTCGGTTGA+AGG | - | chr8_2:16339391-16339410 | None:intergenic | 30.0% | |
ACCGAATGCAATATTATTTG+AGG | + | chr8_2:16339394-16339413 | Msa1237090:intron | 30.0% | |
ACGTGTCTACATTTAGTATT+TGG | - | chr8_2:16339425-16339444 | None:intergenic | 30.0% | |
TGCAAATATGGACTCAAATA+GGG | - | chr8_2:16339670-16339689 | None:intergenic | 30.0% | |
TTGCAAATATGGACTCAAAT+AGG | - | chr8_2:16339671-16339690 | None:intergenic | 30.0% | |
AGTCCATATTTGCAATCAAT+AGG | + | chr8_2:16339676-16339695 | Msa1237090:CDS | 30.0% | |
! | GATCCTATTGATTGCAAATA+TGG | - | chr8_2:16339682-16339701 | None:intergenic | 30.0% |
CTTACAAAGAAAGATGTAGT+TGG | - | chr8_2:16339757-16339776 | None:intergenic | 30.0% | |
ACTACATCTTTCTTTGTAAG+TGG | + | chr8_2:16339757-16339776 | Msa1237090:CDS | 30.0% | |
TTGCCTTAGTTGTATTTGAA+GGG | - | chr8_2:16339797-16339816 | None:intergenic | 30.0% | |
TTTGCCTTAGTTGTATTTGA+AGG | - | chr8_2:16339798-16339817 | None:intergenic | 30.0% | |
AATGCTACAATTCAAATCCA+AGG | + | chr8_2:16339816-16339835 | Msa1237090:CDS | 30.0% | |
! | TTTCAAAATTTTATCCGTGC+CGG | + | chr8_2:16340057-16340076 | Msa1237090:intron | 30.0% |
GACTCAAAACCAATGAATTA+CGG | - | chr8_2:16340124-16340143 | None:intergenic | 30.0% | |
TACTAACTTCTAGTCCTAAT+AGG | + | chr8_2:16340164-16340183 | Msa1237090:intron | 30.0% | |
ACTAACTTCTAGTCCTAATA+GGG | + | chr8_2:16340165-16340184 | Msa1237090:intron | 30.0% | |
! | TGAAGGAATCTTGATTTTTG+AGG | - | chr8_2:16340283-16340302 | None:intergenic | 30.0% |
ATAGACTTTCCAAAGATATC+AGG | - | chr8_2:16340306-16340325 | None:intergenic | 30.0% | |
AGAGTAGATATTTCATGTCA+TGG | + | chr8_2:16340447-16340466 | Msa1237090:intron | 30.0% | |
! | ACACTCTAAAGAAATGCAAA+TGG | - | chr8_2:16340986-16341005 | None:intergenic | 30.0% |
! | TATTTCTGACTTAATGCAAC+TGG | + | chr8_2:16341301-16341320 | Msa1237090:intron | 30.0% |
AACACAAATTGAAACCGTAA+AGG | - | chr8_2:16341612-16341631 | None:intergenic | 30.0% | |
TGCTAACAAGATTATAGCTA+AGG | + | chr8_2:16341790-16341809 | Msa1237090:CDS | 30.0% | |
AGTTTATGAAGAAGAAATGG+AGG | - | chr8_2:16341842-16341861 | None:intergenic | 30.0% | |
CAATAAGATTTGTCGAACTT+TGG | + | chr8_2:16341951-16341970 | Msa1237090:three_prime_UTR | 30.0% | |
CATGCAATTTACTACCAATG+GGG | - | chr8_2:16339045-16339064 | None:intergenic | 35.0% | |
CCATGCAATTTACTACCAAT+GGG | - | chr8_2:16339046-16339065 | None:intergenic | 35.0% | |
ACCATGCAATTTACTACCAA+TGG | - | chr8_2:16339047-16339066 | None:intergenic | 35.0% | |
!! | AATGAGCTCCTTTAAGATGT+TGG | + | chr8_2:16339085-16339104 | Msa1237090:CDS | 35.0% |
! | TGCTCAAACTGTGATTTTCA+AGG | + | chr8_2:16339170-16339189 | Msa1237090:CDS | 35.0% |
!!! | AGGCTCATTGTGGATTTTTT+AGG | + | chr8_2:16339314-16339333 | Msa1237090:CDS | 35.0% |
TGTCCAACACATGAGAAAAT+TGG | + | chr8_2:16339589-16339608 | Msa1237090:intron | 35.0% | |
! | GAACCAATTTTCTCATGTGT+TGG | - | chr8_2:16339595-16339614 | None:intergenic | 35.0% |
GTTGTATTTGAAGGGCAAAA+GGG | - | chr8_2:16339789-16339808 | None:intergenic | 35.0% | |
AGTTGTATTTGAAGGGCAAA+AGG | - | chr8_2:16339790-16339809 | None:intergenic | 35.0% | |
TTGCCCTTCAAATACAACTA+AGG | + | chr8_2:16339791-16339810 | Msa1237090:CDS | 35.0% | |
!!! | ATTTTTGAGGCACAAGTAGA+GGG | - | chr8_2:16340270-16340289 | None:intergenic | 35.0% |
ATTCCTTCACCTGATATCTT+TGG | + | chr8_2:16340294-16340313 | Msa1237090:CDS | 35.0% | |
TTTCCAAAGATATCAGGTGA+AGG | - | chr8_2:16340300-16340319 | None:intergenic | 35.0% | |
GCAATTTGGTAGATGATTTG+AGG | - | chr8_2:16340411-16340430 | None:intergenic | 35.0% | |
AGGCTACAATCTTCACAATT+AGG | + | chr8_2:16340487-16340506 | Msa1237090:intron | 35.0% | |
! | TTCTAGGAGTTATATGCACA+AGG | + | chr8_2:16340571-16340590 | Msa1237090:intron | 35.0% |
TCTAGGAGTTATATGCACAA+GGG | + | chr8_2:16340572-16340591 | Msa1237090:intron | 35.0% | |
GTATTAAATCTTGGTCCAGT+GGG | + | chr8_2:16340610-16340629 | Msa1237090:CDS | 35.0% | |
TCTAAGTCAGAACTAGTATG+AGG | - | chr8_2:16340664-16340683 | None:intergenic | 35.0% | |
! | AGTTCTGACTTAGATGAACA+TGG | + | chr8_2:16340670-16340689 | Msa1237090:CDS | 35.0% |
! | ATTGGTGTCCACATAAATGA+GGG | - | chr8_2:16340788-16340807 | None:intergenic | 35.0% |
! | AATTGGTGTCCACATAAATG+AGG | - | chr8_2:16340789-16340808 | None:intergenic | 35.0% |
TTTCGTCATCCTACATCTTA+TGG | + | chr8_2:16340826-16340845 | Msa1237090:CDS | 35.0% | |
GTTCATGTACCATAAGATGT+AGG | - | chr8_2:16340838-16340857 | None:intergenic | 35.0% | |
TAGAGTGTGTGTTTGAATGA+AGG | + | chr8_2:16340998-16341017 | Msa1237090:intron | 35.0% | |
TAAAGGATTCATCACACTTG+TGG | - | chr8_2:16341595-16341614 | None:intergenic | 35.0% | |
CAAGTGTGATGAATCCTTTA+CGG | + | chr8_2:16341595-16341614 | Msa1237090:intron | 35.0% | |
ACGGTTTCAATTTGTGTTCT+TGG | + | chr8_2:16341614-16341633 | Msa1237090:intron | 35.0% | |
TATTGCCACACAATGCTTTA+GGG | - | chr8_2:16341703-16341722 | None:intergenic | 35.0% | |
ATATTGCCACACAATGCTTT+AGG | - | chr8_2:16341704-16341723 | None:intergenic | 35.0% | |
! | ATCCCAACTCACATAGTTTT+GGG | - | chr8_2:16341750-16341769 | None:intergenic | 35.0% |
ATAGCTAAGGCCATTCTTAA+TGG | + | chr8_2:16341803-16341822 | Msa1237090:CDS | 35.0% | |
ACTTAGTGAGCCATTAAGAA+TGG | - | chr8_2:16341816-16341835 | None:intergenic | 35.0% | |
! | CCCATTGGTAGTAAATTGCA+TGG | + | chr8_2:16339043-16339062 | Msa1237090:exon | 40.0% |
GGAGATTCAAATTCGGATAC+AGG | + | chr8_2:16339206-16339225 | Msa1237090:CDS | 40.0% | |
GATTCAAATTCGGATACAGG+TGG | + | chr8_2:16339209-16339228 | Msa1237090:CDS | 40.0% | |
ATAGGATCAGACTACACACA+TGG | + | chr8_2:16339694-16339713 | Msa1237090:CDS | 40.0% | |
TAGGATCAGACTACACACAT+GGG | + | chr8_2:16339695-16339714 | Msa1237090:CDS | 40.0% | |
! | AGTTGGCAAAAGTACAGTAG+AGG | - | chr8_2:16339740-16339759 | None:intergenic | 40.0% |
TGTCTGTGTCCGTAATTCAT+TGG | + | chr8_2:16340112-16340131 | Msa1237090:intron | 40.0% | |
CACAAGTAGAGGGTTTCAAT+GGG | - | chr8_2:16340260-16340279 | None:intergenic | 40.0% | |
!!! | GATTTTTGAGGCACAAGTAG+AGG | - | chr8_2:16340271-16340290 | None:intergenic | 40.0% |
ACTTCAAAAATAGCAGCCAG+TGG | + | chr8_2:16340357-16340376 | Msa1237090:CDS | 40.0% | |
ATCATCTACCAAATTGCCTC+TGG | + | chr8_2:16340414-16340433 | Msa1237090:CDS | 40.0% | |
TACTCTAACCTTGATACCAG+AGG | - | chr8_2:16340433-16340452 | None:intergenic | 40.0% | |
CTAGGAGTTATATGCACAAG+GGG | + | chr8_2:16340573-16340592 | Msa1237090:intron | 40.0% | |
TAGGAGTTATATGCACAAGG+GGG | + | chr8_2:16340574-16340593 | Msa1237090:intron | 40.0% | |
GGTATTAAATCTTGGTCCAG+TGG | + | chr8_2:16340609-16340628 | Msa1237090:CDS | 40.0% | |
AGATGCTTCCCTCATTTATG+TGG | + | chr8_2:16340777-16340796 | Msa1237090:CDS | 40.0% | |
AAGCTCCATTAGAGCAGAAT+TGG | - | chr8_2:16340806-16340825 | None:intergenic | 40.0% | |
ATGGTACATGAACCTTTCCT+TGG | + | chr8_2:16340845-16340864 | Msa1237090:intron | 40.0% | |
TCAATTTGTGTTCTTGGAGC+AGG | + | chr8_2:16341620-16341639 | Msa1237090:intron | 40.0% | |
!! | TTTGACCCTAAAGCATTGTG+TGG | + | chr8_2:16341695-16341714 | Msa1237090:CDS | 40.0% |
!! | TCCCAACTCACATAGTTTTG+GGG | - | chr8_2:16341749-16341768 | None:intergenic | 40.0% |
! | CATCCCAACTCACATAGTTT+TGG | - | chr8_2:16341751-16341770 | None:intergenic | 40.0% |
! | CAAAACTATGTGAGTTGGGA+TGG | + | chr8_2:16341749-16341768 | Msa1237090:CDS | 40.0% |
TAAGTCATTCCATAGGGACC+AGG | - | chr8_2:16339260-16339279 | None:intergenic | 45.0% | |
TTGGACGTTCTTCAGATGGA+AGG | + | chr8_2:16339294-16339313 | Msa1237090:CDS | 45.0% | |
TTCAGATGGAAGGCTCATTG+TGG | + | chr8_2:16339304-16339323 | Msa1237090:CDS | 45.0% | |
ACGGGATTGAGTCTAACAGA+AGG | - | chr8_2:16339498-16339517 | None:intergenic | 45.0% | |
TGTTGCTAAACTTGCAGCTG+AGG | + | chr8_2:16339633-16339652 | Msa1237090:intron | 45.0% | |
AGGATCAGACTACACACATG+GGG | + | chr8_2:16339696-16339715 | Msa1237090:CDS | 45.0% | |
!! | ATGTTTTGAGCTCTGCTGCA+CGG | + | chr8_2:16339937-16339956 | Msa1237090:intron | 45.0% |
GCACGGATATCTCTGATTGA+AGG | + | chr8_2:16339954-16339973 | Msa1237090:intron | 45.0% | |
GCACAAGTAGAGGGTTTCAA+TGG | - | chr8_2:16340261-16340280 | None:intergenic | 45.0% | |
TCAAAAATAGCAGCCAGTGG+TGG | + | chr8_2:16340360-16340379 | Msa1237090:CDS | 45.0% | |
CAATCCATTGATACCACCAC+TGG | - | chr8_2:16340376-16340395 | None:intergenic | 45.0% | |
CCTTGATACCAGAGGCAATT+TGG | - | chr8_2:16340425-16340444 | None:intergenic | 45.0% | |
CCAAATTGCCTCTGGTATCA+AGG | + | chr8_2:16340422-16340441 | Msa1237090:CDS | 45.0% | |
ACAAGGGGGACGTACATTTA+TGG | + | chr8_2:16340588-16340607 | Msa1237090:CDS | 45.0% | |
GGACACCAATTCTGCTCTAA+TGG | + | chr8_2:16340798-16340817 | Msa1237090:CDS | 45.0% | |
CACAGTACCAAAGCATGTTG+TGG | + | chr8_2:16341650-16341669 | Msa1237090:CDS | 45.0% | |
ACCAAAGCATGTTGTGGTCA+TGG | + | chr8_2:16341656-16341675 | Msa1237090:CDS | 45.0% | |
TCCATGACCACAACATGCTT+TGG | - | chr8_2:16341660-16341679 | None:intergenic | 45.0% | |
AAAGCATGTTGTGGTCATGG+AGG | + | chr8_2:16341659-16341678 | Msa1237090:CDS | 45.0% | |
AAGCATGTTGTGGTCATGGA+GGG | + | chr8_2:16341660-16341679 | Msa1237090:CDS | 45.0% | |
ACCCCCAAAACTATGTGAGT+TGG | + | chr8_2:16341744-16341763 | Msa1237090:CDS | 45.0% | |
!!! | CCCAACTCACATAGTTTTGG+GGG | - | chr8_2:16341748-16341767 | None:intergenic | 45.0% |
CCCCCAAAACTATGTGAGTT+GGG | + | chr8_2:16341745-16341764 | Msa1237090:CDS | 45.0% | |
!! | TTATAAACAAAAAATTATAT+TGG | + | chr8_2:16341567-16341586 | Msa1237090:intron | 5.0% |
TCAGCATTTCCAGCACAACC+TGG | + | chr8_2:16339239-16339258 | Msa1237090:CDS | 50.0% | |
CCATCTGAAGAACGTCCAAC+TGG | - | chr8_2:16339293-16339312 | None:intergenic | 50.0% | |
CCAGTTGGACGTTCTTCAGA+TGG | + | chr8_2:16339290-16339309 | Msa1237090:CDS | 50.0% | |
! | AAACTTGCAGCTGAGGCACT+TGG | + | chr8_2:16339640-16339659 | Msa1237090:intron | 50.0% |
CATGATACGTGTCGAACACC+AGG | - | chr8_2:16339985-16340004 | None:intergenic | 50.0% | |
CACAAGTGTCAGTGTCGTGT+CGG | - | chr8_2:16340015-16340034 | None:intergenic | 50.0% | |
ATGCTACCCTGGATACTTGG+TGG | + | chr8_2:16340633-16340652 | Msa1237090:CDS | 50.0% | |
GAAGCTCCACCAAGTATCCA+GGG | - | chr8_2:16340642-16340661 | None:intergenic | 50.0% | |
AGCATGTTGTGGTCATGGAG+GGG | + | chr8_2:16341661-16341680 | Msa1237090:CDS | 50.0% | |
! | CTCTGATTGAAGGCGTGTCC+TGG | + | chr8_2:16339964-16339983 | Msa1237090:intron | 55.0% |
TGACACTGACACAGACACGC+CGG | - | chr8_2:16340079-16340098 | None:intergenic | 55.0% | |
GCAGCCAGTGGTGGTATCAA+TGG | + | chr8_2:16340369-16340388 | Msa1237090:CDS | 55.0% | |
TATCCAGGGTAGCATCCCAC+TGG | - | chr8_2:16340628-16340647 | None:intergenic | 55.0% | |
GGGATGCTACCCTGGATACT+TGG | + | chr8_2:16340630-16340649 | Msa1237090:CDS | 55.0% | |
GGAAGCTCCACCAAGTATCC+AGG | - | chr8_2:16340643-16340662 | None:intergenic | 55.0% | |
GCATGTTGTGGTCATGGAGG+GGG | + | chr8_2:16341662-16341681 | Msa1237090:CDS | 55.0% | |
CCATAGGGACCAGGTTGTGC+TGG | - | chr8_2:16339251-16339270 | None:intergenic | 60.0% | |
CCAGCACAACCTGGTCCCTA+TGG | + | chr8_2:16339248-16339267 | Msa1237090:CDS | 60.0% | |
CTGACACAGACACGCCGGCA+CGG | - | chr8_2:16340074-16340093 | None:intergenic | 65.0% | |
GGTCCAGTGGGATGCTACCC+TGG | + | chr8_2:16340622-16340641 | Msa1237090:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 16339014 | 16342013 | 16339014 | ID=Msa1237090;Name=Msa1237090 |
chr8_2 | mRNA | 16339014 | 16342013 | 16339014 | ID=Msa1237090-mRNA-1;Parent=Msa1237090;Name=Msa1237090-mRNA-1;_AED=0.08;_eAED=0.08;_QI=48|1|1|1|1|1|5|127|395 |
chr8_2 | exon | 16339014 | 16339335 | 16339014 | ID=Msa1237090-mRNA-1:exon:6106;Parent=Msa1237090-mRNA-1 |
chr8_2 | exon | 16339650 | 16339859 | 16339650 | ID=Msa1237090-mRNA-1:exon:6107;Parent=Msa1237090-mRNA-1 |
chr8_2 | exon | 16340256 | 16340443 | 16340256 | ID=Msa1237090-mRNA-1:exon:6108;Parent=Msa1237090-mRNA-1 |
chr8_2 | exon | 16340577 | 16340847 | 16340577 | ID=Msa1237090-mRNA-1:exon:6109;Parent=Msa1237090-mRNA-1 |
chr8_2 | exon | 16341642 | 16342013 | 16341642 | ID=Msa1237090-mRNA-1:exon:6110;Parent=Msa1237090-mRNA-1 |
chr8_2 | five_prime_UTR | 16339014 | 16339061 | 16339014 | ID=Msa1237090-mRNA-1:five_prime_utr;Parent=Msa1237090-mRNA-1 |
chr8_2 | CDS | 16339062 | 16339335 | 16339062 | ID=Msa1237090-mRNA-1:cds;Parent=Msa1237090-mRNA-1 |
chr8_2 | CDS | 16339650 | 16339859 | 16339650 | ID=Msa1237090-mRNA-1:cds;Parent=Msa1237090-mRNA-1 |
chr8_2 | CDS | 16340256 | 16340443 | 16340256 | ID=Msa1237090-mRNA-1:cds;Parent=Msa1237090-mRNA-1 |
chr8_2 | CDS | 16340577 | 16340847 | 16340577 | ID=Msa1237090-mRNA-1:cds;Parent=Msa1237090-mRNA-1 |
chr8_2 | CDS | 16341642 | 16341886 | 16341642 | ID=Msa1237090-mRNA-1:cds;Parent=Msa1237090-mRNA-1 |
chr8_2 | three_prime_UTR | 16341887 | 16342013 | 16341887 | ID=Msa1237090-mRNA-1:three_prime_utr;Parent=Msa1237090-mRNA-1 |
Gene Sequence |
Protein sequence |