Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238830 | XP_013444931.1 | 84.993 | 673 | 29 | 4 | 1 | 636 | 1 | 638 | 0.0 | 1140 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238830 | sp|Q9ZPH9|PMTF_ARATH | 61.280 | 656 | 168 | 6 | 22 | 636 | 20 | 630 | 0.0 | 817 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238830 | A0A072TP47 | 84.993 | 673 | 29 | 4 | 1 | 636 | 1 | 638 | 0.0 | 1140 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1238830 | Msa1280310 | 0.852598 | 4.155529e-61 | -8.615850e-47 |
Msa0915550 | Msa1238830 | 0.810115 | 1.352911e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238830 | MtrunA17_Chr8g0350391 | 84.993 | 673 | 29 | 4 | 1 | 636 | 1 | 638 | 0.0 | 1140 |
Msa1238830 | MtrunA17_Chr7g0246701 | 67.873 | 663 | 134 | 5 | 14 | 636 | 10 | 633 | 0.0 | 918 |
Msa1238830 | MtrunA17_Chr6g0472571 | 57.534 | 657 | 197 | 6 | 18 | 636 | 22 | 634 | 0.0 | 769 |
Msa1238830 | MtrunA17_Chr1g0203741 | 55.728 | 646 | 198 | 7 | 23 | 629 | 22 | 618 | 0.0 | 738 |
Msa1238830 | MtrunA17_Chr8g0388881 | 51.538 | 650 | 235 | 8 | 24 | 636 | 22 | 628 | 0.0 | 669 |
Msa1238830 | MtrunA17_Chr4g0055031 | 48.678 | 643 | 236 | 9 | 27 | 630 | 18 | 605 | 0.0 | 625 |
Msa1238830 | MtrunA17_Chr8g0361791 | 49.060 | 638 | 237 | 10 | 27 | 629 | 17 | 601 | 0.0 | 619 |
Msa1238830 | MtrunA17_Chr5g0416991 | 48.276 | 638 | 243 | 11 | 27 | 630 | 17 | 601 | 0.0 | 605 |
Msa1238830 | MtrunA17_Chr3g0092501 | 48.195 | 637 | 241 | 12 | 26 | 630 | 20 | 599 | 0.0 | 593 |
Msa1238830 | MtrunA17_Chr7g0214551 | 45.455 | 561 | 232 | 6 | 104 | 622 | 37 | 565 | 0.0 | 525 |
Msa1238830 | MtrunA17_Chr8g0369481 | 42.714 | 597 | 264 | 11 | 70 | 628 | 32 | 588 | 1.95e-164 | 483 |
Msa1238830 | MtrunA17_Chr5g0409411 | 42.399 | 592 | 259 | 11 | 76 | 628 | 42 | 590 | 4.77e-157 | 464 |
Msa1238830 | MtrunA17_Chr8g0350351 | 40.108 | 556 | 249 | 11 | 113 | 629 | 91 | 601 | 2.39e-145 | 434 |
Msa1238830 | MtrunA17_Chr7g0246681 | 41.727 | 556 | 238 | 11 | 113 | 628 | 78 | 587 | 2.95e-145 | 434 |
Msa1238830 | MtrunA17_Chr3g0112341 | 39.928 | 556 | 255 | 12 | 113 | 630 | 156 | 670 | 4.59e-133 | 405 |
Msa1238830 | MtrunA17_Chr1g0183721 | 38.070 | 570 | 256 | 11 | 110 | 628 | 62 | 585 | 1.04e-131 | 399 |
Msa1238830 | MtrunA17_Chr5g0435751 | 39.356 | 559 | 238 | 12 | 106 | 625 | 121 | 617 | 1.23e-130 | 397 |
Msa1238830 | MtrunA17_Chr1g0159741 | 38.366 | 563 | 260 | 12 | 103 | 627 | 145 | 658 | 2.43e-126 | 387 |
Msa1238830 | MtrunA17_Chr1g0167381 | 37.918 | 538 | 250 | 10 | 110 | 604 | 92 | 588 | 2.77e-121 | 373 |
Msa1238830 | MtrunA17_Chr1g0187601 | 38.219 | 539 | 249 | 10 | 110 | 605 | 91 | 588 | 4.70e-120 | 370 |
Msa1238830 | MtrunA17_Chr3g0130381 | 37.123 | 563 | 259 | 14 | 119 | 634 | 268 | 782 | 2.33e-115 | 363 |
Msa1238830 | MtrunA17_Chr3g0113981 | 36.131 | 548 | 266 | 14 | 119 | 632 | 175 | 672 | 1.07e-114 | 358 |
Msa1238830 | MtrunA17_Chr1g0171781 | 33.234 | 674 | 328 | 16 | 5 | 629 | 4 | 604 | 1.10e-114 | 355 |
Msa1238830 | MtrunA17_Chr3g0125511 | 36.702 | 564 | 261 | 17 | 119 | 634 | 233 | 748 | 5.49e-114 | 358 |
Msa1238830 | MtrunA17_Chr5g0437501 | 34.921 | 567 | 260 | 15 | 114 | 628 | 96 | 605 | 4.16e-113 | 352 |
Msa1238830 | MtrunA17_Chr8g0384431 | 37.338 | 541 | 246 | 16 | 119 | 611 | 298 | 793 | 6.05e-112 | 354 |
Msa1238830 | MtrunA17_Chr8g0372471 | 36.036 | 555 | 259 | 16 | 119 | 628 | 387 | 890 | 8.18e-105 | 338 |
Msa1238830 | MtrunA17_Chr1g0155141 | 34.177 | 553 | 265 | 17 | 116 | 628 | 206 | 699 | 1.87e-88 | 290 |
Msa1238830 | MtrunA17_Chr5g0426281 | 30.339 | 590 | 287 | 16 | 104 | 628 | 140 | 670 | 7.29e-82 | 271 |
Msa1238830 | MtrunA17_Chr3g0115931 | 30.034 | 596 | 289 | 15 | 105 | 628 | 149 | 688 | 4.43e-81 | 270 |
Msa1238830 | MtrunA17_Chr5g0404771 | 46.288 | 229 | 103 | 5 | 119 | 336 | 329 | 548 | 6.81e-66 | 226 |
Msa1238830 | MtrunA17_Chr4g0043121 | 32.722 | 327 | 202 | 7 | 109 | 426 | 85 | 402 | 4.01e-53 | 188 |
Msa1238830 | MtrunA17_Chr5g0404761 | 28.477 | 302 | 142 | 9 | 359 | 619 | 1 | 269 | 1.22e-36 | 138 |
Msa1238830 | MtrunA17_Chr4g0043131 | 36.364 | 176 | 76 | 5 | 455 | 627 | 40 | 182 | 6.78e-29 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1238830 | AT4G00750.1 | 61.280 | 656 | 168 | 6 | 22 | 636 | 20 | 630 | 0.0 | 817 |
Msa1238830 | AT2G45750.1 | 60.153 | 655 | 176 | 6 | 22 | 636 | 14 | 623 | 0.0 | 802 |
Msa1238830 | AT1G33170.1 | 55.746 | 583 | 189 | 4 | 88 | 633 | 89 | 639 | 0.0 | 685 |
Msa1238830 | AT4G10440.1 | 53.159 | 649 | 223 | 7 | 24 | 635 | 19 | 623 | 0.0 | 684 |
Msa1238830 | AT1G26850.2 | 48.611 | 648 | 240 | 9 | 27 | 633 | 18 | 613 | 0.0 | 627 |
Msa1238830 | AT1G26850.1 | 48.611 | 648 | 240 | 9 | 27 | 633 | 18 | 613 | 0.0 | 627 |
Msa1238830 | AT4G18030.1 | 48.742 | 636 | 233 | 9 | 33 | 630 | 25 | 605 | 0.0 | 606 |
Msa1238830 | AT2G43200.2 | 45.902 | 549 | 231 | 6 | 109 | 623 | 90 | 606 | 2.03e-175 | 512 |
Msa1238830 | AT2G43200.1 | 45.902 | 549 | 231 | 6 | 109 | 623 | 90 | 606 | 2.03e-175 | 512 |
Msa1238830 | AT1G31850.1 | 43.419 | 585 | 256 | 9 | 81 | 628 | 50 | 596 | 1.45e-168 | 494 |
Msa1238830 | AT1G31850.2 | 43.419 | 585 | 256 | 9 | 81 | 628 | 50 | 596 | 1.45e-168 | 494 |
Msa1238830 | AT1G31850.4 | 43.419 | 585 | 256 | 9 | 81 | 628 | 50 | 596 | 1.45e-168 | 494 |
Msa1238830 | AT1G31850.3 | 43.419 | 585 | 256 | 9 | 81 | 628 | 50 | 596 | 1.45e-168 | 494 |
Msa1238830 | AT1G26850.3 | 48.425 | 508 | 199 | 8 | 27 | 493 | 18 | 503 | 5.15e-168 | 489 |
Msa1238830 | AT4G19120.1 | 44.283 | 551 | 239 | 9 | 113 | 628 | 73 | 590 | 3.54e-163 | 481 |
Msa1238830 | AT4G19120.2 | 44.283 | 551 | 239 | 9 | 113 | 628 | 73 | 590 | 3.54e-163 | 481 |
Msa1238830 | AT4G00740.1 | 40.957 | 564 | 248 | 9 | 109 | 631 | 77 | 596 | 3.28e-149 | 445 |
Msa1238830 | AT4G00740.2 | 40.957 | 564 | 248 | 9 | 109 | 631 | 77 | 596 | 3.28e-149 | 445 |
Msa1238830 | AT2G39750.1 | 40.813 | 566 | 252 | 13 | 105 | 630 | 172 | 694 | 1.52e-137 | 418 |
Msa1238830 | AT4G19120.3 | 47.552 | 429 | 188 | 7 | 113 | 506 | 73 | 499 | 3.23e-137 | 410 |
Msa1238830 | AT5G06050.1 | 39.153 | 567 | 258 | 15 | 104 | 627 | 141 | 663 | 2.74e-130 | 399 |
Msa1238830 | AT1G77260.1 | 36.780 | 590 | 274 | 14 | 77 | 626 | 124 | 654 | 4.20e-127 | 390 |
Msa1238830 | AT1G04430.1 | 34.351 | 655 | 315 | 16 | 28 | 628 | 20 | 613 | 7.81e-124 | 380 |
Msa1238830 | AT1G04430.3 | 34.351 | 655 | 315 | 16 | 28 | 628 | 20 | 613 | 7.81e-124 | 380 |
Msa1238830 | AT1G04430.2 | 34.351 | 655 | 315 | 16 | 28 | 628 | 20 | 613 | 7.81e-124 | 380 |
Msa1238830 | AT5G14430.1 | 37.258 | 569 | 269 | 10 | 110 | 631 | 80 | 607 | 2.25e-121 | 374 |
Msa1238830 | AT4G14360.1 | 37.918 | 538 | 250 | 11 | 110 | 604 | 76 | 572 | 4.43e-121 | 372 |
Msa1238830 | AT4G14360.2 | 37.918 | 538 | 250 | 11 | 110 | 604 | 76 | 572 | 4.43e-121 | 372 |
Msa1238830 | AT3G23300.2 | 36.879 | 564 | 270 | 12 | 110 | 628 | 79 | 601 | 8.24e-121 | 372 |
Msa1238830 | AT3G23300.1 | 36.879 | 564 | 270 | 12 | 110 | 628 | 79 | 601 | 8.24e-121 | 372 |
Msa1238830 | AT5G14430.2 | 36.907 | 569 | 271 | 10 | 110 | 631 | 80 | 607 | 1.89e-119 | 369 |
Msa1238830 | AT1G29470.1 | 33.923 | 622 | 312 | 18 | 62 | 634 | 190 | 761 | 6.73e-113 | 356 |
Msa1238830 | AT1G29470.2 | 33.923 | 622 | 312 | 18 | 62 | 634 | 190 | 761 | 6.73e-113 | 356 |
Msa1238830 | AT3G51070.1 | 37.633 | 566 | 253 | 18 | 119 | 635 | 381 | 895 | 1.22e-112 | 359 |
Msa1238830 | AT3G56080.1 | 36.563 | 547 | 258 | 16 | 119 | 628 | 114 | 608 | 1.61e-112 | 350 |
Msa1238830 | AT2G34300.2 | 35.866 | 566 | 261 | 14 | 119 | 634 | 250 | 763 | 2.30e-112 | 355 |
Msa1238830 | AT2G34300.3 | 35.866 | 566 | 261 | 14 | 119 | 634 | 250 | 763 | 2.30e-112 | 355 |
Msa1238830 | AT2G34300.1 | 35.866 | 566 | 261 | 14 | 119 | 634 | 250 | 763 | 2.30e-112 | 355 |
Msa1238830 | AT5G04060.1 | 35.189 | 557 | 277 | 12 | 113 | 629 | 86 | 598 | 1.05e-110 | 345 |
Msa1238830 | AT5G64030.1 | 35.907 | 557 | 262 | 15 | 119 | 628 | 308 | 816 | 1.20e-110 | 352 |
Msa1238830 | AT3G10200.1 | 35.778 | 559 | 273 | 13 | 113 | 629 | 75 | 589 | 1.83e-110 | 345 |
Msa1238830 | AT2G40280.1 | 36.330 | 545 | 259 | 16 | 119 | 628 | 90 | 581 | 6.79e-110 | 343 |
Msa1238830 | AT3G10200.2 | 36.811 | 508 | 236 | 11 | 113 | 579 | 75 | 538 | 5.45e-101 | 320 |
Msa1238830 | AT3G56080.2 | 37.214 | 481 | 221 | 14 | 119 | 562 | 114 | 550 | 2.74e-99 | 314 |
Msa1238830 | AT3G51070.2 | 38.086 | 491 | 213 | 15 | 119 | 562 | 381 | 827 | 1.43e-96 | 315 |
Msa1238830 | AT1G19430.1 | 33.273 | 550 | 275 | 17 | 116 | 628 | 228 | 722 | 1.23e-84 | 280 |
Msa1238830 | AT1G19430.3 | 33.273 | 550 | 275 | 17 | 116 | 628 | 228 | 722 | 1.23e-84 | 280 |
Msa1238830 | AT2G03480.2 | 30.144 | 554 | 314 | 12 | 105 | 627 | 81 | 592 | 3.38e-80 | 265 |
Msa1238830 | AT2G03480.1 | 29.754 | 568 | 309 | 12 | 105 | 627 | 81 | 603 | 8.19e-80 | 265 |
Msa1238830 | AT1G13860.4 | 30.225 | 579 | 296 | 15 | 102 | 625 | 73 | 598 | 1.39e-78 | 261 |
Msa1238830 | AT1G13860.3 | 30.225 | 579 | 296 | 15 | 102 | 625 | 73 | 598 | 1.39e-78 | 261 |
Msa1238830 | AT1G13860.1 | 30.225 | 579 | 296 | 15 | 102 | 625 | 73 | 598 | 1.39e-78 | 261 |
Msa1238830 | AT1G13860.5 | 30.225 | 579 | 296 | 15 | 102 | 625 | 73 | 598 | 1.39e-78 | 261 |
Msa1238830 | AT1G78240.1 | 29.592 | 588 | 305 | 15 | 102 | 627 | 138 | 678 | 1.45e-74 | 253 |
Msa1238830 | AT1G78240.2 | 29.592 | 588 | 305 | 15 | 102 | 627 | 138 | 678 | 1.45e-74 | 253 |
Msa1238830 | AT1G13860.2 | 31.106 | 479 | 236 | 13 | 199 | 625 | 6 | 442 | 7.85e-67 | 226 |
Msa1238830 | AT1G19430.2 | 32.216 | 388 | 207 | 13 | 116 | 467 | 228 | 595 | 6.06e-50 | 183 |
Msa1238830 | AT2G03480.3 | 29.526 | 359 | 232 | 6 | 105 | 454 | 81 | 427 | 5.37e-48 | 174 |
Find 189 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTTGTTCTTGTAGTTTA+AGG | 0.067114 | 8_2:+19671724 | None:intergenic |
CGGTAGATAAGTTTCTTTCT+AGG | 0.219333 | 8_2:+19671286 | None:intergenic |
CAGTGTTTCTGCCAGTTTAT+TGG | 0.229481 | 8_2:+19666531 | None:intergenic |
AATGCATACGTTGATGATAT+TGG | 0.260687 | 8_2:-19671040 | Msa1238830:CDS |
CATTGAACCGGACCCAATTC+TGG | 0.263748 | 8_2:+19671113 | None:intergenic |
CGCAAAATTACACCACCTTT+TGG | 0.268044 | 8_2:+19664456 | None:intergenic |
TGTCTTATGTCTCAATGATT+TGG | 0.268755 | 8_2:-19664051 | Msa1238830:three_prime_UTR |
CACTGGTTGATGATCCTGTT+TGG | 0.271747 | 8_2:-19665526 | Msa1238830:CDS |
CTCAAGGTGCCTCATTCCTT+GGG | 0.284464 | 8_2:-19667591 | Msa1238830:CDS |
CCTCTGTCAGGTGGCAAGTT+GGG | 0.284665 | 8_2:-19667780 | Msa1238830:intron |
GGTTCAATGGGAACCGGTTC+AGG | 0.289569 | 8_2:-19671099 | Msa1238830:CDS |
TAAACACGCGCCGTCTTTAA+TGG | 0.291956 | 8_2:+19671382 | None:intergenic |
TATTATTACCAAGCCATATC+TGG | 0.306114 | 8_2:+19666312 | None:intergenic |
TGGGAACCGGTTCAGGTTCC+CGG | 0.309672 | 8_2:-19671092 | Msa1238830:CDS |
TGATGGTACTATTGTTGTTA+TGG | 0.313842 | 8_2:+19671461 | None:intergenic |
GTCTTATGTCTCAATGATTT+GGG | 0.319739 | 8_2:-19664050 | Msa1238830:three_prime_UTR |
TTTGATAAGGTCCTTCTTCA+TGG | 0.322080 | 8_2:+19664361 | None:intergenic |
TCATTGGAACCTATCAAAAT+TGG | 0.328039 | 8_2:-19665439 | Msa1238830:CDS |
GTTTATGACAAAACTTTCAT+AGG | 0.336200 | 8_2:-19664252 | Msa1238830:three_prime_UTR |
GATTCTCAGCTAGCAGAGTT+AGG | 0.338955 | 8_2:-19665602 | Msa1238830:CDS |
TACCAGCTCCGTTTGGTTAC+CGG | 0.343310 | 8_2:-19671219 | Msa1238830:CDS |
CTGCGAACCAAGTTTGAAAA+TGG | 0.343395 | 8_2:+19663990 | None:intergenic |
TCCTTCAAGAGCCTTTGATA+TGG | 0.343800 | 8_2:-19667621 | Msa1238830:CDS |
GGAGGAGGGTTGAGAGGTGG+TGG | 0.345849 | 8_2:+19671507 | None:intergenic |
CGGTTCAGGTTCCCGGGTGG+TGG | 0.346840 | 8_2:-19671085 | Msa1238830:CDS |
GCTCAAGGTGCCTCATTCCT+TGG | 0.353928 | 8_2:-19667592 | Msa1238830:CDS |
GCCGTCTTTAATGGTGGGTC+AGG | 0.357993 | 8_2:+19671391 | None:intergenic |
TACTGCGTCCTGGTGGATAC+TGG | 0.363456 | 8_2:-19666569 | Msa1238830:CDS |
GAAGCATATGGAGGAGGAGG+AGG | 0.363490 | 8_2:+19671486 | None:intergenic |
TTGTAGCAGTCAAGCAATAC+TGG | 0.370223 | 8_2:-19664326 | Msa1238830:CDS |
GCATATGGAGGAGGAGGAGG+AGG | 0.372746 | 8_2:+19671489 | None:intergenic |
CAGAATTGGGTCCGGTTCAA+TGG | 0.372960 | 8_2:-19671112 | Msa1238830:CDS |
CTCTGGCAGTGGGGTCAAAC+AGG | 0.380078 | 8_2:+19665791 | None:intergenic |
AGATTGGTTAATAATATGTT+TGG | 0.380836 | 8_2:+19671634 | None:intergenic |
GGAGGGTTGAGAGGTGGTGG+TGG | 0.383443 | 8_2:+19671510 | None:intergenic |
CACCACCCGGGAACCTGAAC+CGG | 0.386058 | 8_2:+19671086 | None:intergenic |
GGAGAGACACTGTCCCTTAC+CGG | 0.387343 | 8_2:-19671263 | Msa1238830:CDS |
TTGGTTACCGGTTACCATTA+CGG | 0.387657 | 8_2:-19671207 | Msa1238830:CDS |
CTCATTCCTTGGGGACAGTA+TGG | 0.391794 | 8_2:-19667581 | Msa1238830:intron |
TAGTATGGAGAACATTCTTC+TGG | 0.392731 | 8_2:-19664499 | Msa1238830:CDS |
GGAGGAGGAGGGTTGAGAGG+TGG | 0.394565 | 8_2:+19671504 | None:intergenic |
ATGCATACGTTGATGATATT+GGG | 0.395046 | 8_2:-19671039 | Msa1238830:CDS |
ACTGGTTGATGATCCTGTTT+GGG | 0.396422 | 8_2:-19665525 | Msa1238830:CDS |
CGAGGTGTTCCTGCATTGAT+TGG | 0.398281 | 8_2:-19667671 | Msa1238830:CDS |
AACTTTGCAATGCATATGAT+TGG | 0.410264 | 8_2:+19666383 | None:intergenic |
TGGATTTGAAAGTGTGAACT+AGG | 0.415347 | 8_2:+19671662 | None:intergenic |
ATGCTTTGCTTCTATTTGCT+AGG | 0.417856 | 8_2:-19665415 | Msa1238830:CDS |
CTTGATATGAATTCTTACTT+AGG | 0.419305 | 8_2:-19665563 | Msa1238830:CDS |
TGTCAGGGCCACCAATAAAC+TGG | 0.422208 | 8_2:-19666542 | Msa1238830:CDS |
GGTGGATACTGGATTCTGTC+AGG | 0.422593 | 8_2:-19666558 | Msa1238830:CDS |
GGAGGAGGAGGAGGGTTGAG+AGG | 0.424084 | 8_2:+19671501 | None:intergenic |
ATCAGAACCGCTATTGATAC+TGG | 0.431052 | 8_2:-19670989 | Msa1238830:CDS |
AGAGGTGGTGGTGGAGTAAC+CGG | 0.434045 | 8_2:+19671519 | None:intergenic |
ATATATGAACGTGGACTCAT+TGG | 0.439385 | 8_2:-19665455 | Msa1238830:CDS |
TCCACTGTTAACTCCTTATG+TGG | 0.442873 | 8_2:+19671145 | None:intergenic |
GTATTAATTTCAGCCTCAAC+AGG | 0.445082 | 8_2:+19665488 | None:intergenic |
TGCTTTGCTTCTATTTGCTA+GGG | 0.445698 | 8_2:-19665414 | Msa1238830:CDS |
ACAATGTTCATGACCCAAAC+AGG | 0.446029 | 8_2:+19665512 | None:intergenic |
ACCGCTATTGATACTGGTTG+TGG | 0.449655 | 8_2:-19670983 | Msa1238830:CDS |
AGGAGGCTTTGCAGCTGCAC+TGG | 0.450194 | 8_2:-19665543 | Msa1238830:CDS |
CGGAGAGCCGTGACGCGGCT+TGG | 0.451448 | 8_2:-19671180 | Msa1238830:CDS |
TTAATGGTGGGTCAGGGAGG+TGG | 0.453183 | 8_2:+19671398 | None:intergenic |
TGGGTCAGGGAGGTGGTGAG+TGG | 0.453291 | 8_2:+19671405 | None:intergenic |
GCCTCTGTCAGGTGGCAAGT+TGG | 0.456791 | 8_2:-19667781 | Msa1238830:intron |
GGCAGAAACACTGGAAAGGA+TGG | 0.460542 | 8_2:-19666521 | Msa1238830:CDS |
GTGGAAGCATATGGAGGAGG+AGG | 0.460556 | 8_2:+19671483 | None:intergenic |
ATCATTACCTGTGTTGGTAG+AGG | 0.465030 | 8_2:+19664771 | None:intergenic |
TCAAAGGCTCTTGAAGGATA+AGG | 0.470121 | 8_2:+19667626 | None:intergenic |
CTCTGTCAGGTGGCAAGTTG+GGG | 0.470142 | 8_2:-19667779 | Msa1238830:intron |
CTAGAAAGAAACTTATCTAC+CGG | 0.470377 | 8_2:-19671285 | Msa1238830:CDS |
AAAGGTGATAAAATATAGAT+TGG | 0.470588 | 8_2:+19671618 | None:intergenic |
ACATTCTTCTGGAGATGGAC+AGG | 0.472069 | 8_2:-19664488 | Msa1238830:CDS |
TCAAAGAAAATACTGAGTTA+TGG | 0.474678 | 8_2:-19665653 | Msa1238830:CDS |
GCCATATCAAAGGCTCTTGA+AGG | 0.476108 | 8_2:+19667620 | None:intergenic |
GGTGGTGGAGTAACCGGTGG+CGG | 0.477067 | 8_2:+19671525 | None:intergenic |
GATATGAATTCTTACTTAGG+AGG | 0.477149 | 8_2:-19665560 | Msa1238830:CDS |
AGAATTGGGTCCGGTTCAAT+GGG | 0.477439 | 8_2:-19671111 | Msa1238830:CDS |
ACGTTGTTTACCTCTGGCAG+TGG | 0.477856 | 8_2:+19665780 | None:intergenic |
TGTTTCTGCCAGTTTATTGG+TGG | 0.479008 | 8_2:+19666534 | None:intergenic |
CGGCTCTCCGGCCACCGTAA+TGG | 0.479127 | 8_2:+19671193 | None:intergenic |
CATTGAGACATAAGACAACT+TGG | 0.482261 | 8_2:+19664057 | None:intergenic |
CGTTGTTTACCTCTGGCAGT+GGG | 0.485691 | 8_2:+19665781 | None:intergenic |
GGTAGATAAGTTTCTTTCTA+GGG | 0.486795 | 8_2:+19671287 | None:intergenic |
GGGAACCGGTTCAGGTTCCC+GGG | 0.487651 | 8_2:-19671091 | Msa1238830:CDS |
ATCCTGTGCTTCTTCACAGA+AGG | 0.489745 | 8_2:+19666335 | None:intergenic |
GTATGCAAATGTTCCACATA+AGG | 0.490309 | 8_2:-19671158 | Msa1238830:CDS |
AATGTGTCACAGATGTAGTA+TGG | 0.494069 | 8_2:-19664514 | Msa1238830:intron |
GTCATAAGTTCGTGGGTAAG+TGG | 0.497521 | 8_2:+19664820 | None:intergenic |
GGGTCCGGTTCAATGGGAAC+CGG | 0.497595 | 8_2:-19671105 | Msa1238830:CDS |
GGAAACATGGTCCCACCACC+CGG | 0.500756 | 8_2:+19671073 | None:intergenic |
AAGTTGATAAATCTTAAAGA+TGG | 0.500800 | 8_2:-19671016 | Msa1238830:CDS |
CCGCTATTGATACTGGTTGT+GGG | 0.500830 | 8_2:-19670982 | Msa1238830:CDS |
GTTGTTATGGTGGAAGCATA+TGG | 0.502135 | 8_2:+19671474 | None:intergenic |
AGAGAGATGGTTCACATGGC+GGG | 0.503272 | 8_2:+19671353 | None:intergenic |
CCGGAGAGTCTCCTCCGGTA+AGG | 0.504588 | 8_2:+19671249 | None:intergenic |
TTGGTTTCTGCCATATTGCA+AGG | 0.507652 | 8_2:+19666406 | None:intergenic |
TGAGCTTCATGAGTATCTCT+TGG | 0.508204 | 8_2:+19667713 | None:intergenic |
TGGAGTTGTGGTGGCTGTGA+TGG | 0.508915 | 8_2:+19671444 | None:intergenic |
TAATAATCTTCAAGATGTAA+AGG | 0.510707 | 8_2:+19664162 | None:intergenic |
TGAACCGGTTCCCATTGAAC+CGG | 0.511199 | 8_2:+19671101 | None:intergenic |
GGTTCAGGTTCCCGGGTGGT+GGG | 0.512597 | 8_2:-19671084 | Msa1238830:CDS |
CAAGCCGCGTCACGGCTCTC+CGG | 0.517885 | 8_2:+19671181 | None:intergenic |
GAAAGGATGGGAAAGGACTA+AGG | 0.517991 | 8_2:-19666508 | Msa1238830:CDS |
ATTCCTATCATTACCTGTGT+TGG | 0.518933 | 8_2:+19664765 | None:intergenic |
CGAACTTATGACTTCATACA+TGG | 0.519679 | 8_2:-19664809 | Msa1238830:CDS |
TTGATATGGCTCACTGCTCA+AGG | 0.520634 | 8_2:-19667607 | Msa1238830:CDS |
GAGGCTGAAATTAATACTCT+TGG | 0.521230 | 8_2:-19665482 | Msa1238830:CDS |
ACCCTTCTGTGAAGAAGCAC+AGG | 0.521524 | 8_2:-19666337 | Msa1238830:CDS |
CACAGGATCCAGATATGGCT+TGG | 0.523470 | 8_2:-19666320 | Msa1238830:intron |
CAATAAACTGGCAGAAACAC+TGG | 0.525587 | 8_2:-19666530 | Msa1238830:CDS |
AATGGTAACCGGTAACCAAA+CGG | 0.526104 | 8_2:+19671211 | None:intergenic |
GGATTTGAAAGTGTGAACTA+GGG | 0.530718 | 8_2:+19671663 | None:intergenic |
GCGGAGATGACGGTGGTGGA+AGG | 0.532130 | 8_2:+19671544 | None:intergenic |
CGGAGAGTCTCCTCCGGTAA+GGG | 0.533497 | 8_2:+19671250 | None:intergenic |
CTCTGCTAGCTGAGAATCAA+GGG | 0.534011 | 8_2:+19665607 | None:intergenic |
ACTCTGCTAGCTGAGAATCA+AGG | 0.537525 | 8_2:+19665606 | None:intergenic |
TGTAGAATACCAGCTCCGTT+TGG | 0.539019 | 8_2:-19671226 | Msa1238830:CDS |
TTGCAATGCATATGATTGGT+TGG | 0.540005 | 8_2:+19666387 | None:intergenic |
GATAGTGATGCCAGAGACCA+AGG | 0.542805 | 8_2:+19671566 | None:intergenic |
TCCTGTGCTTCTTCACAGAA+GGG | 0.543718 | 8_2:+19666336 | None:intergenic |
GGAGAACATTCTTCTGGAGA+TGG | 0.545202 | 8_2:-19664493 | Msa1238830:CDS |
GTCAGGGAGGTGGTGAGTGG+CGG | 0.549270 | 8_2:+19671408 | None:intergenic |
CATGAACATTGTTCCTGTTG+AGG | 0.551321 | 8_2:-19665501 | Msa1238830:CDS |
CGCTATTGATACTGGTTGTG+GGG | 0.552452 | 8_2:-19670981 | Msa1238830:intron |
AGAAGCACAGGATCCAGATA+TGG | 0.552863 | 8_2:-19666325 | Msa1238830:CDS |
GTTGATAGACTACTGCGTCC+TGG | 0.555737 | 8_2:-19666579 | Msa1238830:CDS |
ATTTGCGCCACGTGGAAACA+TGG | 0.556653 | 8_2:+19671060 | None:intergenic |
CCTTACCGGAGGAGACTCTC+CGG | 0.558619 | 8_2:-19671249 | Msa1238830:CDS |
CCGTCTTTAATGGTGGGTCA+GGG | 0.559080 | 8_2:+19671392 | None:intergenic |
CACCATGTGAGGATCAGAAA+AGG | 0.559630 | 8_2:-19671321 | Msa1238830:CDS |
AGAATTAGAGACCATGAAGA+AGG | 0.559942 | 8_2:-19664372 | Msa1238830:CDS |
GGTGGCGGAGATGACGGTGG+TGG | 0.560421 | 8_2:+19671540 | None:intergenic |
GTGGATACTGGATTCTGTCA+GGG | 0.560463 | 8_2:-19666557 | Msa1238830:CDS |
GTAAGGGACAGTGTCTCTCC+CGG | 0.564561 | 8_2:+19671266 | None:intergenic |
ACCACCGTCATCTCCGCCAC+CGG | 0.564856 | 8_2:-19671538 | Msa1238830:CDS |
ATGGTGGAAGCATATGGAGG+AGG | 0.566141 | 8_2:+19671480 | None:intergenic |
TGGTACTATTGTTGTTATGG+TGG | 0.566419 | 8_2:+19671464 | None:intergenic |
CCGGTTACCATTACGGTGGC+CGG | 0.566750 | 8_2:-19671200 | Msa1238830:CDS |
CATACTGTCCCCAAGGAATG+AGG | 0.567067 | 8_2:+19667582 | None:intergenic |
AGTTGATAAATCTTAAAGAT+GGG | 0.567309 | 8_2:-19671015 | Msa1238830:CDS |
GCAAGAATTCCAATCAATGC+AGG | 0.567592 | 8_2:+19667662 | None:intergenic |
GTAACCGGTGGCGGAGATGA+CGG | 0.576488 | 8_2:+19671534 | None:intergenic |
AGGATAAGGAAGTCTTATTG+AGG | 0.584502 | 8_2:+19667640 | None:intergenic |
GAGACCAAGGAAGTAAAAGA+AGG | 0.586234 | 8_2:+19671579 | None:intergenic |
AGTTCGTGGGTAAGTGGACA+TGG | 0.592832 | 8_2:+19664826 | None:intergenic |
ACGTATGCATTTGCGCCACG+TGG | 0.597146 | 8_2:+19671052 | None:intergenic |
CACGCGCCGTCTTTAATGGT+GGG | 0.600069 | 8_2:+19671386 | None:intergenic |
CCCTGACCCACCATTAAAGA+CGG | 0.600337 | 8_2:-19671392 | Msa1238830:CDS |
ACACGCGCCGTCTTTAATGG+TGG | 0.603246 | 8_2:+19671385 | None:intergenic |
TTGCATACCAAGCCGCGTCA+CGG | 0.608939 | 8_2:+19671173 | None:intergenic |
TGTATGAAGTCATAAGTTCG+TGG | 0.612720 | 8_2:+19664812 | None:intergenic |
GTGGCGGTGAAGTCGAGTGA+TGG | 0.613488 | 8_2:+19671424 | None:intergenic |
CTGTTTGACCCCACTGCCAG+AGG | 0.613886 | 8_2:-19665790 | Msa1238830:intron |
GGTGTGTATTCATAGAGAGA+TGG | 0.621253 | 8_2:+19671340 | None:intergenic |
GCAGAAACACTGGAAAGGAT+GGG | 0.622662 | 8_2:-19666520 | Msa1238830:CDS |
AATGTACCATACTGTCCCCA+AGG | 0.624070 | 8_2:+19667575 | None:intergenic |
GTATGAAGTCATAAGTTCGT+GGG | 0.624591 | 8_2:+19664813 | None:intergenic |
CATCGCAGATGAAATGCAGT+GGG | 0.625105 | 8_2:-19664400 | Msa1238830:CDS |
GTTCAATTTGCTCTTGAACG+AGG | 0.626971 | 8_2:-19667689 | Msa1238830:CDS |
GAAACATGGTCCCACCACCC+GGG | 0.628660 | 8_2:+19671074 | None:intergenic |
TCAAGGTGCCTCATTCCTTG+GGG | 0.628784 | 8_2:-19667590 | Msa1238830:CDS |
GTCGAGTGATGGAGTTGTGG+TGG | 0.630098 | 8_2:+19671435 | None:intergenic |
GACAGAATCCAGTATCCACC+AGG | 0.632745 | 8_2:+19666561 | None:intergenic |
TCTTTAATGGTGGGTCAGGG+AGG | 0.633409 | 8_2:+19671395 | None:intergenic |
GCATCGCAGATGAAATGCAG+TGG | 0.633794 | 8_2:-19664401 | Msa1238830:CDS |
TAGAAAGAAACTTATCTACC+GGG | 0.634061 | 8_2:-19671284 | Msa1238830:CDS |
AACTGGCAGAAACACTGGAA+AGG | 0.634858 | 8_2:-19666525 | Msa1238830:CDS |
AACACTGGAAAGGATGGGAA+AGG | 0.634984 | 8_2:-19666515 | Msa1238830:CDS |
GTGGCCGGAGAGCCGTGACG+CGG | 0.641029 | 8_2:-19671185 | Msa1238830:CDS |
CTTGGTGTCATATATGAACG+TGG | 0.642336 | 8_2:-19665464 | Msa1238830:CDS |
ACGGAGCTGGTATTCTACAC+CGG | 0.646040 | 8_2:+19671230 | None:intergenic |
CTATGAATACACACCATGTG+AGG | 0.647297 | 8_2:-19671332 | Msa1238830:CDS |
TCATAGAGAGATGGTTCACA+TGG | 0.648590 | 8_2:+19671349 | None:intergenic |
TAGAGAGATGGTTCACATGG+CGG | 0.649653 | 8_2:+19671352 | None:intergenic |
GGTGGTGGTGGAGTAACCGG+TGG | 0.649812 | 8_2:+19671522 | None:intergenic |
AACCGGTTCAGGTTCCCGGG+TGG | 0.660844 | 8_2:-19671088 | Msa1238830:CDS |
TGAGCAGTGAGCCATATCAA+AGG | 0.666508 | 8_2:+19667610 | None:intergenic |
GAGATGGTTCACATGGCGGG+AGG | 0.670300 | 8_2:+19671356 | None:intergenic |
GTTATGGTGGAAGCATATGG+AGG | 0.688651 | 8_2:+19671477 | None:intergenic |
GAGACACTGTCCCTTACCGG+AGG | 0.691198 | 8_2:-19671260 | Msa1238830:CDS |
GATAGACTACTGCGTCCTGG+TGG | 0.694036 | 8_2:-19666576 | Msa1238830:CDS |
TCCACATAAGGAGTTAACAG+TGG | 0.696628 | 8_2:-19671146 | Msa1238830:CDS |
GTTGTTTACCTCTGGCAGTG+GGG | 0.703697 | 8_2:+19665782 | None:intergenic |
ACCGGTGGCGGAGATGACGG+TGG | 0.706903 | 8_2:+19671537 | None:intergenic |
GAAGTCGAGTGATGGAGTTG+TGG | 0.711625 | 8_2:+19671432 | None:intergenic |
GTTACCGGTTACCATTACGG+TGG | 0.720599 | 8_2:-19671204 | Msa1238830:CDS |
CCCACAACCAGTATCAATAG+CGG | 0.733656 | 8_2:+19670982 | None:intergenic |
CAATGTAGATGTGTTGACGA+AGG | 0.740038 | 8_2:-19664430 | Msa1238830:CDS |
GGTGGGACCATGTTTCCACG+TGG | 0.744968 | 8_2:-19671067 | Msa1238830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTATAATATATTATTA+TGG | + | chr8_2:19665861-19665880 | None:intergenic | 0.0% |
!!! | TAATAAAAATTTAGCTTTAA+TGG | - | chr8_2:19665527-19665546 | Msa1238830:CDS | 10.0% |
!! | AATAAATAAAAAAACAAGTT+TGG | + | chr8_2:19665762-19665781 | None:intergenic | 10.0% |
!!! | TAATCATATTTAATTTTAAC+TGG | + | chr8_2:19668538-19668557 | None:intergenic | 10.0% |
!!! | TAATTTATTTTCTCAAATTA+TGG | - | chr8_2:19669041-19669060 | Msa1238830:intron | 10.0% |
!!! | AATTTATTTTCTCAAATTAT+GGG | - | chr8_2:19669042-19669061 | Msa1238830:intron | 10.0% |
!!! | TAATAATATGTTTGGTTTTT+TGG | + | chr8_2:19664155-19664174 | None:intergenic | 15.0% |
!!! | ATTAAATATTTTTACCTATG+AGG | - | chr8_2:19665095-19665114 | Msa1238830:intron | 15.0% |
!! | AATAAAAATTTAAGTCAGTT+AGG | + | chr8_2:19665187-19665206 | None:intergenic | 15.0% |
!! | TTAAAATGTATATACATAGT+TGG | + | chr8_2:19665498-19665517 | None:intergenic | 15.0% |
!! | AATACATAAATAGCTAAAAA+GGG | + | chr8_2:19665924-19665943 | None:intergenic | 15.0% |
!! | TAATACATAAATAGCTAAAA+AGG | + | chr8_2:19665925-19665944 | None:intergenic | 15.0% |
!! | TATTCAATGTATATAAAAAG+TGG | - | chr8_2:19666456-19666475 | Msa1238830:CDS | 15.0% |
!!! | CAACTTATTTTAATTTTCAA+AGG | + | chr8_2:19666937-19666956 | None:intergenic | 15.0% |
!! | AAAAAAATAAAATAAGCTGA+GGG | - | chr8_2:19667926-19667945 | Msa1238830:intron | 15.0% |
!! | TAATTACACTAAATTATTTG+TGG | + | chr8_2:19668310-19668329 | None:intergenic | 15.0% |
!! | ATTTAGTGTAATTATATGTT+CGG | - | chr8_2:19668316-19668335 | Msa1238830:intron | 15.0% |
!!! | GATATAATAAACATGATTTT+AGG | + | chr8_2:19668505-19668524 | None:intergenic | 15.0% |
!!! | TTTATTGTTTTTTTTGTAAC+AGG | + | chr8_2:19668750-19668769 | None:intergenic | 15.0% |
!!! | AAAATATAAAAGTAGCTTTT+AGG | - | chr8_2:19670654-19670673 | Msa1238830:intron | 15.0% |
!!! | AAAAGTTTTAATAAACAACT+TGG | + | chr8_2:19670707-19670726 | None:intergenic | 15.0% |
!!! | TTAAAACTTTTTAAATAGTC+TGG | - | chr8_2:19670716-19670735 | Msa1238830:intron | 15.0% |
!! | AAATTGAAAAGTGAAATTTA+AGG | - | chr8_2:19670873-19670892 | Msa1238830:intron | 15.0% |
!! | TCATATTATACTATAAAAGT+AGG | + | chr8_2:19671085-19671104 | None:intergenic | 15.0% |
!!! | AGATTGGTTAATAATATGTT+TGG | + | chr8_2:19664163-19664182 | None:intergenic | 20.0% |
!! | AAAGGTGATAAAATATAGAT+TGG | + | chr8_2:19664179-19664198 | None:intergenic | 20.0% |
!!! | AAGTTGATAAATCTTAAAGA+TGG | - | chr8_2:19664778-19664797 | Msa1238830:intron | 20.0% |
!!! | AGTTGATAAATCTTAAAGAT+GGG | - | chr8_2:19664779-19664798 | Msa1238830:CDS | 20.0% |
!! | AAATATTTAATTGAACCAAC+CGG | + | chr8_2:19665086-19665105 | None:intergenic | 20.0% |
!!! | TTTTTGTTTTTATCTCTTTC+TGG | - | chr8_2:19665551-19665570 | Msa1238830:CDS | 20.0% |
!! | AAAAAAAAATCCAATCATTG+AGG | + | chr8_2:19665688-19665707 | None:intergenic | 20.0% |
!! | ATACATAAATAGCTAAAAAG+GGG | + | chr8_2:19665923-19665942 | None:intergenic | 20.0% |
!! | AAAGAAAAAAAGTCTTAGAT+AGG | - | chr8_2:19666057-19666076 | Msa1238830:intron | 20.0% |
!! | AAGAAAAAAAGTCTTAGATA+GGG | - | chr8_2:19666058-19666077 | Msa1238830:intron | 20.0% |
!! | TAAAAATAAAGGGTCAAAAT+TGG | - | chr8_2:19666213-19666232 | Msa1238830:intron | 20.0% |
!!! | ACACATTTTAACTTTAAATG+TGG | + | chr8_2:19666325-19666344 | None:intergenic | 20.0% |
!! | TATTCAATGTATCTAAAAAG+TGG | + | chr8_2:19666395-19666414 | None:intergenic | 20.0% |
!! | ATGTATCTAGTCTATAATAA+AGG | + | chr8_2:19666432-19666451 | None:intergenic | 20.0% |
!!! | TTTAATATTTTTGGTTGGAT+TGG | + | chr8_2:19666697-19666716 | None:intergenic | 20.0% |
!!! | TGGATTTTAATATTTTTGGT+TGG | + | chr8_2:19666702-19666721 | None:intergenic | 20.0% |
!!! | GGTTTGGATTTTAATATTTT+TGG | + | chr8_2:19666706-19666725 | None:intergenic | 20.0% |
!! | AATGAGAAACATTAATGTAT+TGG | + | chr8_2:19666727-19666746 | None:intergenic | 20.0% |
!! | TCGTAATTTATTACAATATC+AGG | - | chr8_2:19666789-19666808 | Msa1238830:intron | 20.0% |
!! | TAATTTATTACAATATCAGG+TGG | - | chr8_2:19666792-19666811 | Msa1238830:intron | 20.0% |
!!! | ATTTTTGCTTATTTCATTCA+TGG | + | chr8_2:19667049-19667068 | None:intergenic | 20.0% |
!! | ATCATATATAACATAGACTT+AGG | - | chr8_2:19667481-19667500 | Msa1238830:intron | 20.0% |
!! | GAAAAAAATAAAATAAGCTG+AGG | - | chr8_2:19667925-19667944 | Msa1238830:intron | 20.0% |
!! | ATAAACACATTCAATGATTA+AGG | - | chr8_2:19668445-19668464 | Msa1238830:intron | 20.0% |
!! | TAAACACATTCAATGATTAA+GGG | - | chr8_2:19668446-19668465 | Msa1238830:intron | 20.0% |
!!! | CTTTGAAGATAAAAATAATG+TGG | - | chr8_2:19668642-19668661 | Msa1238830:intron | 20.0% |
!! | TAAAAATAATGTGGTTGAAA+AGG | - | chr8_2:19668651-19668670 | Msa1238830:intron | 20.0% |
!! | TGGAAAAAATTAGTACAAAA+AGG | - | chr8_2:19669362-19669381 | Msa1238830:intron | 20.0% |
!! | AGCTAAAATTTCTATGTATT+AGG | + | chr8_2:19669555-19669574 | None:intergenic | 20.0% |
!! | TCGAAATAAAGCAAATTAAT+AGG | + | chr8_2:19669594-19669613 | None:intergenic | 20.0% |
!!! | ATTTGCTTTATTTCGATTTT+CGG | - | chr8_2:19669598-19669617 | Msa1238830:intron | 20.0% |
!!! | CAGATGAAATAATTTTTGAT+CGG | + | chr8_2:19670505-19670524 | None:intergenic | 20.0% |
!! | GATCAAAAATTATTTCATCT+GGG | - | chr8_2:19670504-19670523 | Msa1238830:intron | 20.0% |
!! | TCATACTGAAAAACTAATTA+GGG | + | chr8_2:19670683-19670702 | None:intergenic | 20.0% |
!! | ATCATACTGAAAAACTAATT+AGG | + | chr8_2:19670684-19670703 | None:intergenic | 20.0% |
!!! | CAAACACTAATTTTTGATTT+TGG | - | chr8_2:19671578-19671597 | Msa1238830:CDS | 20.0% |
!!! | TAAGAGAAATTTTGTTCATA+TGG | - | chr8_2:19671607-19671626 | Msa1238830:CDS | 20.0% |
!! | TAATAATCTTCAAGATGTAA+AGG | + | chr8_2:19671635-19671654 | None:intergenic | 20.0% |
! | TTTCTTGTTCTTGTAGTTTA+AGG | + | chr8_2:19664073-19664092 | None:intergenic | 25.0% |
! | AATAAACCCAACAGAAAAAA+CGG | + | chr8_2:19664863-19664882 | None:intergenic | 25.0% |
!! | CTAATTCAATCATTGAGTTT+TGG | + | chr8_2:19665715-19665734 | None:intergenic | 25.0% |
!!! | TTTGTGAACTTTTTTATCGT+AGG | - | chr8_2:19665821-19665840 | Msa1238830:intron | 25.0% |
! | TACATAAATAGCTAAAAAGG+GGG | + | chr8_2:19665922-19665941 | None:intergenic | 25.0% |
! | AAAGACATATTCCCAATATA+TGG | - | chr8_2:19666018-19666037 | Msa1238830:intron | 25.0% |
! | ATATTCCCAATATATGGTAA+AGG | - | chr8_2:19666024-19666043 | Msa1238830:intron | 25.0% |
! | AGTTTCCTTTACCATATATT+GGG | + | chr8_2:19666032-19666051 | None:intergenic | 25.0% |
! | AAGTTTCCTTTACCATATAT+TGG | + | chr8_2:19666033-19666052 | None:intergenic | 25.0% |
! | AGAAAAAAAGTCTTAGATAG+GGG | - | chr8_2:19666059-19666078 | Msa1238830:intron | 25.0% |
! | TGAAATGATATCTCATCTTA+AGG | + | chr8_2:19666173-19666192 | None:intergenic | 25.0% |
!! | TCAAAATTGGACATTTTTGT+GGG | - | chr8_2:19666226-19666245 | Msa1238830:intron | 25.0% |
! | GTATATTGCATATTATATGC+AGG | - | chr8_2:19666265-19666284 | Msa1238830:intron | 25.0% |
! | AACTTTAAATGTGGAGAAAT+GGG | + | chr8_2:19666316-19666335 | None:intergenic | 25.0% |
! | TAACTTTAAATGTGGAGAAA+TGG | + | chr8_2:19666317-19666336 | None:intergenic | 25.0% |
!! | ATTTTGCTTATAATAGTGAC+CGG | + | chr8_2:19666371-19666390 | None:intergenic | 25.0% |
! | ATGTTAATAGATCCAATGTA+GGG | + | chr8_2:19666585-19666604 | None:intergenic | 25.0% |
!!! | GAAACATTAATGTATTGGTT+TGG | + | chr8_2:19666722-19666741 | None:intergenic | 25.0% |
! | TTAATGTTTCTCATTCATAG+AGG | - | chr8_2:19666732-19666751 | Msa1238830:intron | 25.0% |
! | GAATGAAATAAGCAAAAATG+CGG | - | chr8_2:19667050-19667069 | Msa1238830:intron | 25.0% |
!! | AGAATCAGAAAGAAGATTTT+AGG | + | chr8_2:19667343-19667362 | None:intergenic | 25.0% |
!! | CTGACTAAGATTTTATTGTA+TGG | + | chr8_2:19667456-19667475 | None:intergenic | 25.0% |
! | AATTACCTTTCCATTTGAAT+TGG | - | chr8_2:19667782-19667801 | Msa1238830:intron | 25.0% |
!! | TTTTTCCAATTCAAATGGAA+AGG | + | chr8_2:19667790-19667809 | None:intergenic | 25.0% |
!!! | ATCTGTTTTTCCAATTCAAA+TGG | + | chr8_2:19667795-19667814 | None:intergenic | 25.0% |
!!! | TTGGTAATTTCACGAATTTT+GGG | - | chr8_2:19667953-19667972 | Msa1238830:intron | 25.0% |
! | ATGAAGCACATTTATGAAAA+CGG | - | chr8_2:19668257-19668276 | Msa1238830:intron | 25.0% |
! | GTGTGATAAAATAGTAAAAC+AGG | + | chr8_2:19668474-19668493 | None:intergenic | 25.0% |
! | TTCAATACGCACTTTATTAT+TGG | - | chr8_2:19668817-19668836 | Msa1238830:intron | 25.0% |
!! | ATTATTGGTTGAAATTCATG+TGG | - | chr8_2:19668832-19668851 | Msa1238830:intron | 25.0% |
! | TTTACTCTACAACATGAAAT+TGG | - | chr8_2:19669005-19669024 | Msa1238830:intron | 25.0% |
! | ATGTATTAGGTACTTCATAT+AGG | + | chr8_2:19669542-19669561 | None:intergenic | 25.0% |
! | AAAGTTAAAACCAACTTGTA+AGG | + | chr8_2:19669688-19669707 | None:intergenic | 25.0% |
! | TGAGTCTAACCAAAATTTAT+TGG | - | chr8_2:19669742-19669761 | Msa1238830:intron | 25.0% |
!! | ATCCAACATTTTATTCGATA+TGG | - | chr8_2:19669836-19669855 | Msa1238830:intron | 25.0% |
! | ATTAGTAGTGAAAGTTTGAA+TGG | - | chr8_2:19670101-19670120 | Msa1238830:intron | 25.0% |
! | TCAAAGAAAATACTGAGTTA+TGG | - | chr8_2:19670141-19670160 | Msa1238830:intron | 25.0% |
! | CTTGATATGAATTCTTACTT+AGG | - | chr8_2:19670231-19670250 | Msa1238830:intron | 25.0% |
!!! | TCGGACTTTATATACTTTTT+CGG | + | chr8_2:19670486-19670505 | None:intergenic | 25.0% |
! | CGATCAAAAATTATTTCATC+TGG | - | chr8_2:19670503-19670522 | Msa1238830:intron | 25.0% |
!! | AGAATCTGAAACAATAGTAA+AGG | + | chr8_2:19670829-19670848 | None:intergenic | 25.0% |
! | TAGGAATCAATTTGATGTAT+TGG | - | chr8_2:19671045-19671064 | Msa1238830:CDS | 25.0% |
!!! | TATGATAGAAGCATTTGTAT+AGG | - | chr8_2:19671159-19671178 | Msa1238830:CDS | 25.0% |
!! | AGTATCTTTTCACTTTGATA+AGG | + | chr8_2:19671449-19671468 | None:intergenic | 25.0% |
! | GTTTATGACAAAACTTTCAT+AGG | - | chr8_2:19671542-19671561 | Msa1238830:CDS | 25.0% |
! | ATGAGTTGAGTTTGAAGATT+AGG | + | chr8_2:19664022-19664041 | None:intergenic | 30.0% |
GGTACATAAGAAAAATGCAA+AGG | + | chr8_2:19664197-19664216 | None:intergenic | 30.0% | |
! | TGATGGTACTATTGTTGTTA+TGG | + | chr8_2:19664336-19664355 | None:intergenic | 30.0% |
GGTAGATAAGTTTCTTTCTA+GGG | + | chr8_2:19664510-19664529 | None:intergenic | 30.0% | |
CTAGAAAGAAACTTATCTAC+CGG | - | chr8_2:19664509-19664528 | Msa1238830:intron | 30.0% | |
TAGAAAGAAACTTATCTACC+GGG | - | chr8_2:19664510-19664529 | Msa1238830:intron | 30.0% | |
!! | AATGCATACGTTGATGATAT+TGG | - | chr8_2:19664754-19664773 | Msa1238830:intron | 30.0% |
!! | ATGCATACGTTGATGATATT+GGG | - | chr8_2:19664755-19664774 | Msa1238830:intron | 30.0% |
AAACGGTTCAAGAAGAATTT+AGG | + | chr8_2:19664846-19664865 | None:intergenic | 30.0% | |
!!! | TTCTGTTGGGTTTATTTTTG+TGG | - | chr8_2:19664867-19664886 | Msa1238830:intron | 30.0% |
! | ATTTTTGTGGTTGTAGAAAC+TGG | - | chr8_2:19664880-19664899 | Msa1238830:intron | 30.0% |
! | AGAAACTGGTTTAATTGAAC+CGG | - | chr8_2:19664894-19664913 | Msa1238830:intron | 30.0% |
! | TCTCTTCTCTTCTATTTCTT+TGG | - | chr8_2:19665006-19665025 | Msa1238830:intron | 30.0% |
GAAAATTGTCATAACCTCAT+AGG | + | chr8_2:19665112-19665131 | None:intergenic | 30.0% | |
!! | TATGTAAAAAGTGCTTGAAC+TGG | - | chr8_2:19665440-19665459 | Msa1238830:CDS | 30.0% |
! | TTTATCTCTTTCTGGTAAGA+AGG | - | chr8_2:19665559-19665578 | Msa1238830:CDS | 30.0% |
TTGATGTAATGTATCACTGT+TGG | - | chr8_2:19665618-19665637 | Msa1238830:CDS | 30.0% | |
ATGTCTTTCACAAGACATAA+GGG | + | chr8_2:19666006-19666025 | None:intergenic | 30.0% | |
TATGTCTTTCACAAGACATA+AGG | + | chr8_2:19666007-19666026 | None:intergenic | 30.0% | |
ATTACGTTTACCTTACTCTA+AGG | + | chr8_2:19666107-19666126 | None:intergenic | 30.0% | |
! | GTCAAAATTGGACATTTTTG+TGG | - | chr8_2:19666225-19666244 | Msa1238830:intron | 30.0% |
TATTGCATATTATATGCAGG+AGG | - | chr8_2:19666268-19666287 | Msa1238830:intron | 30.0% | |
! | ATTTTGCTTATAACAGTGAC+CGG | - | chr8_2:19666480-19666499 | Msa1238830:CDS | 30.0% |
GATGTTAATAGATCCAATGT+AGG | + | chr8_2:19666586-19666605 | None:intergenic | 30.0% | |
!! | CTTGATGATTTCAAGTTAGT+TGG | + | chr8_2:19666969-19666988 | None:intergenic | 30.0% |
TCAAGTGTAAAAAGAAAGCA+TGG | - | chr8_2:19666984-19667003 | Msa1238830:intron | 30.0% | |
TTGTTAATCAAACAGCTACA+TGG | - | chr8_2:19667225-19667244 | Msa1238830:intron | 30.0% | |
! | AATCTGTCTGTCTATGTTTT+AGG | + | chr8_2:19667417-19667436 | None:intergenic | 30.0% |
TTTCTGCATTAAAGGTTACT+TGG | + | chr8_2:19667529-19667548 | None:intergenic | 30.0% | |
AACCTTTAATGCAGAAAGAA+TGG | - | chr8_2:19667532-19667551 | Msa1238830:intron | 30.0% | |
ATCCATTCTTTCTGCATTAA+AGG | + | chr8_2:19667537-19667556 | None:intergenic | 30.0% | |
TTAACGTGTAACAGATGAAT+GGG | - | chr8_2:19667874-19667893 | Msa1238830:intron | 30.0% | |
!!! | GTTGGTAATTTCACGAATTT+TGG | - | chr8_2:19667952-19667971 | Msa1238830:intron | 30.0% |
! | TGGTAATTTCACGAATTTTG+GGG | - | chr8_2:19667954-19667973 | Msa1238830:intron | 30.0% |
TGAATTCGAGACATTACTTA+AGG | + | chr8_2:19668620-19668639 | None:intergenic | 30.0% | |
!! | GTTGATGATTAATCTCAGTA+TGG | + | chr8_2:19668706-19668725 | None:intergenic | 30.0% |
ACATTTCTATGTGGTATCAA+TGG | + | chr8_2:19668864-19668883 | None:intergenic | 30.0% | |
CTATGAGTTACATTTCTATG+TGG | + | chr8_2:19668873-19668892 | None:intergenic | 30.0% | |
! | TGTGACACTAAATTTGTTTG+TGG | - | chr8_2:19669147-19669166 | Msa1238830:intron | 30.0% |
!!! | GTACTAATTTTTTCCAGCAT+AGG | + | chr8_2:19669358-19669377 | None:intergenic | 30.0% |
AACTTTGCAATGCATATGAT+TGG | + | chr8_2:19669414-19669433 | None:intergenic | 30.0% | |
TATTATTACCAAGCCATATC+TGG | + | chr8_2:19669485-19669504 | None:intergenic | 30.0% | |
! | TATTAGATTGCAGCTTTAGT+TGG | - | chr8_2:19669512-19669531 | Msa1238830:intron | 30.0% |
GCAAATTAATAGGCAGAATT+TGG | + | chr8_2:19669584-19669603 | None:intergenic | 30.0% | |
TGTGAAATGTGTCTATAAGT+CGG | - | chr8_2:19669650-19669669 | Msa1238830:intron | 30.0% | |
! | ATTTTCAACATTATCCCTCA+TGG | + | chr8_2:19669818-19669837 | None:intergenic | 30.0% |
AGCCATATCGAATAAAATGT+TGG | + | chr8_2:19669841-19669860 | None:intergenic | 30.0% | |
AACTTTCACTACTAATCCTT+GGG | + | chr8_2:19670097-19670116 | None:intergenic | 30.0% | |
AAACTTTCACTACTAATCCT+TGG | + | chr8_2:19670098-19670117 | None:intergenic | 30.0% | |
GATATGAATTCTTACTTAGG+AGG | - | chr8_2:19670234-19670253 | Msa1238830:intron | 30.0% | |
TCATTGGAACCTATCAAAAT+TGG | - | chr8_2:19670355-19670374 | Msa1238830:intron | 30.0% | |
!! | CAAAGCATACCAATTTTGAT+AGG | + | chr8_2:19670367-19670386 | None:intergenic | 30.0% |
TTTCATAAAGCTGCTATTAG+TGG | + | chr8_2:19670747-19670766 | None:intergenic | 30.0% | |
TACTATTGTTTCAGATTCTG+TGG | - | chr8_2:19670830-19670849 | Msa1238830:intron | 30.0% | |
ACATCTGTGACACATTAATT+TGG | + | chr8_2:19671276-19671295 | None:intergenic | 30.0% | |
TGTCTTATGTCTCAATGATT+TGG | - | chr8_2:19671743-19671762 | Msa1238830:intron | 30.0% | |
GTCTTATGTCTCAATGATTT+GGG | - | chr8_2:19671744-19671763 | Msa1238830:intron | 30.0% | |
GTTTGAAGATTAGGTGTAAG+TGG | + | chr8_2:19664013-19664032 | None:intergenic | 35.0% | |
! | GGATTTGAAAGTGTGAACTA+GGG | + | chr8_2:19664134-19664153 | None:intergenic | 35.0% |
! | TGGATTTGAAAGTGTGAACT+AGG | + | chr8_2:19664135-19664154 | None:intergenic | 35.0% |
! | TGTACCTTCTTTTACTTCCT+TGG | - | chr8_2:19664211-19664230 | Msa1238830:three_prime_UTR | 35.0% |
! | TGGTACTATTGTTGTTATGG+TGG | + | chr8_2:19664333-19664352 | None:intergenic | 35.0% |
CGGTAGATAAGTTTCTTTCT+AGG | + | chr8_2:19664511-19664530 | None:intergenic | 35.0% | |
GTATGCAAATGTTCCACATA+AGG | - | chr8_2:19664636-19664655 | Msa1238830:intron | 35.0% | |
TGGAGAAGAAAAACCAGAAT+TGG | - | chr8_2:19664668-19664687 | Msa1238830:intron | 35.0% | |
GGAGAAGAAAAACCAGAATT+GGG | - | chr8_2:19664669-19664688 | Msa1238830:intron | 35.0% | |
!!! | TCTTGAACCGTTTTTTCTGT+TGG | - | chr8_2:19664853-19664872 | Msa1238830:intron | 35.0% |
!!! | CTTGAACCGTTTTTTCTGTT+GGG | - | chr8_2:19664854-19664873 | Msa1238830:intron | 35.0% |
! | GAAACTGGTTTAATTGAACC+GGG | - | chr8_2:19664895-19664914 | Msa1238830:intron | 35.0% |
AGAAGAGAAGAGAGAGAAAA+TGG | + | chr8_2:19664999-19665018 | None:intergenic | 35.0% | |
! | GAAAATACTTGTGTGGACTA+GGG | + | chr8_2:19665057-19665076 | None:intergenic | 35.0% |
GTTCAAGGAAAATACTTGTG+TGG | + | chr8_2:19665064-19665083 | None:intergenic | 35.0% | |
! | CACAAGTATTTTCCTTGAAC+CGG | - | chr8_2:19665064-19665083 | Msa1238830:intron | 35.0% |
TCACTCTGCACAAAATGTTT+GGG | - | chr8_2:19665143-19665162 | Msa1238830:intron | 35.0% | |
TTAAGTCAGTTAGGTCAACT+TGG | + | chr8_2:19665178-19665197 | None:intergenic | 35.0% | |
!!! | AGCTTTTTTGCCTCAATGAT+TGG | - | chr8_2:19665675-19665694 | Msa1238830:intron | 35.0% |
! | TACCTTACTCTAAGGATAGT+GGG | + | chr8_2:19666099-19666118 | None:intergenic | 35.0% |
! | TTACCTTACTCTAAGGATAG+TGG | + | chr8_2:19666100-19666119 | None:intergenic | 35.0% |
TCTAACCAATATACTCCTTC+CGG | - | chr8_2:19666349-19666368 | Msa1238830:CDS | 35.0% | |
!!! | TTTTTAAGTAGTACTCCCTC+CGG | + | chr8_2:19666502-19666521 | None:intergenic | 35.0% |
! | CTTTTCTTTCGCGTATTCTT+GGG | - | chr8_2:19666530-19666549 | Msa1238830:CDS | 35.0% |
GGAGATAGAAAAAATACCGA+GGG | - | chr8_2:19666822-19666841 | Msa1238830:intron | 35.0% | |
ATAGAAAAAATACCGAGGGT+GGG | - | chr8_2:19666826-19666845 | Msa1238830:intron | 35.0% | |
AAAGCATGGTAAGCAAAATG+CGG | - | chr8_2:19666998-19667017 | Msa1238830:intron | 35.0% | |
GCTAGAATATTCACCTTCAA+AGG | + | chr8_2:19667027-19667046 | None:intergenic | 35.0% | |
ACTTCTATCAACACTACCAA+AGG | + | chr8_2:19667079-19667098 | None:intergenic | 35.0% | |
TAGTCTCACAGAACAAATGA+AGG | - | chr8_2:19667267-19667286 | Msa1238830:intron | 35.0% | |
AATCGATGTTCCTTGTATTC+AGG | + | chr8_2:19667639-19667658 | None:intergenic | 35.0% | |
!!! | TGTTGTTGTTTTCTGCTAAC+TGG | + | chr8_2:19667706-19667725 | None:intergenic | 35.0% |
AGATCTGAATATGAGAGAGA+AGG | - | chr8_2:19667811-19667830 | Msa1238830:intron | 35.0% | |
GATCTGAATATGAGAGAGAA+GGG | - | chr8_2:19667812-19667831 | Msa1238830:intron | 35.0% | |
TTCATCTGTTACACGTTAAC+AGG | + | chr8_2:19667873-19667892 | None:intergenic | 35.0% | |
GTTAACGTGTAACAGATGAA+TGG | - | chr8_2:19667873-19667892 | Msa1238830:intron | 35.0% | |
! | AAAATAAGCTGAGGGTATGT+TGG | - | chr8_2:19667934-19667953 | Msa1238830:intron | 35.0% |
! | GGTAATTTCACGAATTTTGG+GGG | - | chr8_2:19667955-19667974 | Msa1238830:intron | 35.0% |
!! | AGGATAAGGAAGTCTTATTG+AGG | + | chr8_2:19668157-19668176 | None:intergenic | 35.0% |
TATTGAAGAGCTATGAAGCA+CGG | + | chr8_2:19668405-19668424 | None:intergenic | 35.0% | |
TATGACTCAACACTTTAGTG+TGG | + | chr8_2:19668680-19668699 | None:intergenic | 35.0% | |
TTTCTATGTGGTATCAATGG+CGG | + | chr8_2:19668861-19668880 | None:intergenic | 35.0% | |
GCGTAATTCACAATACTGAT+TGG | - | chr8_2:19669169-19669188 | Msa1238830:intron | 35.0% | |
AAAAAGGTGACCTTGCAATA+TGG | - | chr8_2:19669378-19669397 | Msa1238830:intron | 35.0% | |
TTGCAATGCATATGATTGGT+TGG | + | chr8_2:19669410-19669429 | None:intergenic | 35.0% | |
CACATTATTCAATCCAATGC+AGG | + | chr8_2:19669632-19669651 | None:intergenic | 35.0% | |
TAACTTGACTAACCTGATAG+CGG | + | chr8_2:19669773-19669792 | None:intergenic | 35.0% | |
ACATCTCTCATCTTGTTAGT+CGG | - | chr8_2:19669886-19669905 | Msa1238830:intron | 35.0% | |
!! | ACATCAACCTTTTTCATTGC+AGG | - | chr8_2:19669964-19669983 | Msa1238830:intron | 35.0% |
TTGTGTACCTGCAATGAAAA+AGG | + | chr8_2:19669974-19669993 | None:intergenic | 35.0% | |
TCTTTAACGTTGTTTACCTC+TGG | + | chr8_2:19670023-19670042 | None:intergenic | 35.0% | |
AACAACGTTAAAGAAGTTGC+TGG | - | chr8_2:19670029-19670048 | Msa1238830:intron | 35.0% | |
! | GGAATTGAAGTTAGTCTCTT+TGG | + | chr8_2:19670074-19670093 | None:intergenic | 35.0% |
ACTTTCACTACTAATCCTTG+GGG | + | chr8_2:19670096-19670115 | None:intergenic | 35.0% | |
GTATTAATTTCAGCCTCAAC+AGG | + | chr8_2:19670309-19670328 | None:intergenic | 35.0% | |
GAGGCTGAAATTAATACTCT+TGG | - | chr8_2:19670312-19670331 | Msa1238830:intron | 35.0% | |
ATATATGAACGTGGACTCAT+TGG | - | chr8_2:19670339-19670358 | Msa1238830:intron | 35.0% | |
ATGCTTTGCTTCTATTTGCT+AGG | - | chr8_2:19670379-19670398 | Msa1238830:intron | 35.0% | |
! | TGCTTTGCTTCTATTTGCTA+GGG | - | chr8_2:19670380-19670399 | Msa1238830:intron | 35.0% |
AGTTTGTCCTAAAAATCGGA+GGG | + | chr8_2:19670440-19670459 | None:intergenic | 35.0% | |
TGCCAGTTTGTCCTAAAAAT+CGG | + | chr8_2:19670444-19670463 | None:intergenic | 35.0% | |
!! | GGCACTGGTAATTTAGAATT+CGG | - | chr8_2:19670460-19670479 | Msa1238830:intron | 35.0% |
! | ATTTCATCTGGGATTCAAAC+TGG | - | chr8_2:19670515-19670534 | Msa1238830:intron | 35.0% |
GAATTTCAGTGAGTGAATGT+CGG | + | chr8_2:19670557-19670576 | None:intergenic | 35.0% | |
TAGTGAATGACAAGCAACAT+TGG | - | chr8_2:19670621-19670640 | Msa1238830:intron | 35.0% | |
ATAAAGCTGCTATTAGTGGT+AGG | + | chr8_2:19670743-19670762 | None:intergenic | 35.0% | |
AAACATTTGTCCTAAGCATG+TGG | - | chr8_2:19670897-19670916 | Msa1238830:intron | 35.0% | |
! | TTTTTACCTACCACATGCTT+AGG | + | chr8_2:19670910-19670929 | None:intergenic | 35.0% |
! | TACAACTTTTGTCTTGTCTC+AGG | - | chr8_2:19670938-19670957 | Msa1238830:intron | 35.0% |
GTATGAAGTCATAAGTTCGT+GGG | + | chr8_2:19670984-19671003 | None:intergenic | 35.0% | |
TGTATGAAGTCATAAGTTCG+TGG | + | chr8_2:19670985-19671004 | None:intergenic | 35.0% | |
CGAACTTATGACTTCATACA+TGG | - | chr8_2:19670985-19671004 | Msa1238830:CDS | 35.0% | |
ATTCCTATCATTACCTGTGT+TGG | + | chr8_2:19671032-19671051 | None:intergenic | 35.0% | |
GAAAACACGCGTAATATCTT+TGG | - | chr8_2:19671223-19671242 | Msa1238830:CDS | 35.0% | |
AATGTGTCACAGATGTAGTA+TGG | - | chr8_2:19671280-19671299 | Msa1238830:CDS | 35.0% | |
TAGTATGGAGAACATTCTTC+TGG | - | chr8_2:19671295-19671314 | Msa1238830:CDS | 35.0% | |
AGAATTAGAGACCATGAAGA+AGG | - | chr8_2:19671422-19671441 | Msa1238830:CDS | 35.0% | |
TTTGATAAGGTCCTTCTTCA+TGG | + | chr8_2:19671436-19671455 | None:intergenic | 35.0% | |
CATTGAGACATAAGACAACT+TGG | + | chr8_2:19671740-19671759 | None:intergenic | 35.0% | |
!! | GCATTAGCCATTTTCAAACT+TGG | - | chr8_2:19671797-19671816 | Msa1238830:intron | 35.0% |
TGAAGATTAGGTGTAAGTGG+TGG | + | chr8_2:19664010-19664029 | None:intergenic | 40.0% | |
GAGACCAAGGAAGTAAAAGA+AGG | + | chr8_2:19664218-19664237 | None:intergenic | 40.0% | |
! | TCTTTTACTTCCTTGGTCTC+TGG | - | chr8_2:19664218-19664237 | Msa1238830:three_prime_UTR | 40.0% |
! | GTTGTTATGGTGGAAGCATA+TGG | + | chr8_2:19664323-19664342 | None:intergenic | 40.0% |
TCATAGAGAGATGGTTCACA+TGG | + | chr8_2:19664448-19664467 | None:intergenic | 40.0% | |
GGTGTGTATTCATAGAGAGA+TGG | + | chr8_2:19664457-19664476 | None:intergenic | 40.0% | |
CTATGAATACACACCATGTG+AGG | - | chr8_2:19664462-19664481 | Msa1238830:CDS | 40.0% | |
AATGGTAACCGGTAACCAAA+CGG | + | chr8_2:19664586-19664605 | None:intergenic | 40.0% | |
! | TTGGTTACCGGTTACCATTA+CGG | - | chr8_2:19664587-19664606 | Msa1238830:intron | 40.0% |
TCCACATAAGGAGTTAACAG+TGG | - | chr8_2:19664648-19664667 | Msa1238830:intron | 40.0% | |
TCCACTGTTAACTCCTTATG+TGG | + | chr8_2:19664652-19664671 | None:intergenic | 40.0% | |
AGAAAAACCAGAATTGGGTC+CGG | - | chr8_2:19664674-19664693 | Msa1238830:intron | 40.0% | |
ATCAGAACCGCTATTGATAC+TGG | - | chr8_2:19664805-19664824 | Msa1238830:CDS | 40.0% | |
GGAAAATACTTGTGTGGACT+AGG | + | chr8_2:19665058-19665077 | None:intergenic | 40.0% | |
! | AGTATTTTCCTTGAACCGGT+TGG | - | chr8_2:19665068-19665087 | Msa1238830:intron | 40.0% |
! | TAATTGAACCAACCGGTTCA+AGG | + | chr8_2:19665079-19665098 | None:intergenic | 40.0% |
CTCACTCTGCACAAAATGTT+TGG | - | chr8_2:19665142-19665161 | Msa1238830:intron | 40.0% | |
AAAAGTCTTAGATAGGGGCA+TGG | - | chr8_2:19666064-19666083 | Msa1238830:intron | 40.0% | |
! | AAAGTCTTAGATAGGGGCAT+GGG | - | chr8_2:19666065-19666084 | Msa1238830:intron | 40.0% |
! | ACCTTACTCTAAGGATAGTG+GGG | + | chr8_2:19666098-19666117 | None:intergenic | 40.0% |
! | TGTGGGTTAACTAAGTTCGT+AGG | - | chr8_2:19666243-19666262 | Msa1238830:intron | 40.0% |
GCATATTATATGCAGGAGGT+CGG | - | chr8_2:19666272-19666291 | Msa1238830:intron | 40.0% | |
CATATTATATGCAGGAGGTC+GGG | - | chr8_2:19666273-19666292 | Msa1238830:intron | 40.0% | |
ATATTATATGCAGGAGGTCG+GGG | - | chr8_2:19666274-19666293 | Msa1238830:intron | 40.0% | |
TGCTTATAATAGTGACCGGA+AGG | + | chr8_2:19666367-19666386 | None:intergenic | 40.0% | |
CCAAGAATACGCGAAAGAAA+AGG | + | chr8_2:19666532-19666551 | None:intergenic | 40.0% | |
! | CCTTTTCTTTCGCGTATTCT+TGG | - | chr8_2:19666529-19666548 | Msa1238830:CDS | 40.0% |
TGAATCTATGTGCCCTACAT+TGG | - | chr8_2:19666570-19666589 | Msa1238830:CDS | 40.0% | |
ACTCGCATCCATTAACATCA+CGG | - | chr8_2:19666622-19666641 | Msa1238830:intron | 40.0% | |
TGTAGTTCCCGTGATGTTAA+TGG | + | chr8_2:19666633-19666652 | None:intergenic | 40.0% | |
GGATAAACACATCACATGCT+AGG | + | chr8_2:19666676-19666695 | None:intergenic | 40.0% | |
ATTACAATATCAGGTGGCAG+TGG | - | chr8_2:19666798-19666817 | Msa1238830:intron | 40.0% | |
CGGAGATAGAAAAAATACCG+AGG | - | chr8_2:19666821-19666840 | Msa1238830:intron | 40.0% | |
GATAGAAAAAATACCGAGGG+TGG | - | chr8_2:19666825-19666844 | Msa1238830:intron | 40.0% | |
!!! | TTTTTTTTTTGGCCCACCCT+CGG | + | chr8_2:19666841-19666860 | None:intergenic | 40.0% |
! | CTTGTATTCAGGTATTGCTG+TGG | + | chr8_2:19667628-19667647 | None:intergenic | 40.0% |
CACAGCAATACCTGAATACA+AGG | - | chr8_2:19667626-19667645 | Msa1238830:CDS | 40.0% | |
ATCTACGAGATCGAACTAGT+TGG | + | chr8_2:19667678-19667697 | None:intergenic | 40.0% | |
GTGTAACAGATGAATGGGAA+AGG | - | chr8_2:19667879-19667898 | Msa1238830:intron | 40.0% | |
ACAGATGAATGGGAAAGGTT+TGG | - | chr8_2:19667884-19667903 | Msa1238830:intron | 40.0% | |
CAGATGAATGGGAAAGGTTT+GGG | - | chr8_2:19667885-19667904 | Msa1238830:intron | 40.0% | |
AGATGAATGGGAAAGGTTTG+GGG | - | chr8_2:19667886-19667905 | Msa1238830:intron | 40.0% | |
!! | AATTTCACGAATTTTGGGGG+TGG | - | chr8_2:19667958-19667977 | Msa1238830:intron | 40.0% |
!! | ATTTCACGAATTTTGGGGGT+GGG | - | chr8_2:19667959-19667978 | Msa1238830:intron | 40.0% |
TGAGCTTCATGAGTATCTCT+TGG | + | chr8_2:19668084-19668103 | None:intergenic | 40.0% | |
! | GTTCAATTTGCTCTTGAACG+AGG | - | chr8_2:19668105-19668124 | Msa1238830:intron | 40.0% |
GCAAGAATTCCAATCAATGC+AGG | + | chr8_2:19668135-19668154 | None:intergenic | 40.0% | |
TCAAAGGCTCTTGAAGGATA+AGG | + | chr8_2:19668171-19668190 | None:intergenic | 40.0% | |
TCCTTCAAGAGCCTTTGATA+TGG | - | chr8_2:19668173-19668192 | Msa1238830:intron | 40.0% | |
TTCTCAGATTAAGCGTGTTC+AGG | + | chr8_2:19668378-19668397 | None:intergenic | 40.0% | |
TGTAGAATGCGAGTGTACAT+TGG | + | chr8_2:19668774-19668793 | None:intergenic | 40.0% | |
! | TCACAATACTGATTGGCAGA+TGG | - | chr8_2:19669176-19669195 | Msa1238830:intron | 40.0% |
! | TGTTTCTGCCAGTTTATTGG+TGG | + | chr8_2:19669263-19669282 | None:intergenic | 40.0% |
! | CAGTGTTTCTGCCAGTTTAT+TGG | + | chr8_2:19669266-19669285 | None:intergenic | 40.0% |
CAATAAACTGGCAGAAACAC+TGG | - | chr8_2:19669264-19669283 | Msa1238830:intron | 40.0% | |
ATGTAGCAAAAAGCCTATGC+TGG | - | chr8_2:19669342-19669361 | Msa1238830:intron | 40.0% | |
TTGGTTTCTGCCATATTGCA+AGG | + | chr8_2:19669391-19669410 | None:intergenic | 40.0% | |
ACATCTCTCACCTTACAAGT+TGG | - | chr8_2:19669675-19669694 | Msa1238830:intron | 40.0% | |
! | GCGGATGGTCCAATAAATTT+TGG | + | chr8_2:19669754-19669773 | None:intergenic | 40.0% |
CAAGTTACATTCCAGATGTC+TGG | - | chr8_2:19669786-19669805 | Msa1238830:intron | 40.0% | |
!! | CGGTTTTGTATGATCGAGTT+AGG | - | chr8_2:19669906-19669925 | Msa1238830:intron | 40.0% |
AACGTTAAAGAAGTTGCTGG+TGG | - | chr8_2:19670032-19670051 | Msa1238830:intron | 40.0% | |
CTGGTGGAGAAATATCAAAG+TGG | - | chr8_2:19670048-19670067 | Msa1238830:intron | 40.0% | |
CTTTCACTACTAATCCTTGG+GGG | + | chr8_2:19670095-19670114 | None:intergenic | 40.0% | |
!! | ACTGGTTGATGATCCTGTTT+GGG | - | chr8_2:19670269-19670288 | Msa1238830:intron | 40.0% |
ACAATGTTCATGACCCAAAC+AGG | + | chr8_2:19670285-19670304 | None:intergenic | 40.0% | |
CATGAACATTGTTCCTGTTG+AGG | - | chr8_2:19670293-19670312 | Msa1238830:intron | 40.0% | |
!! | CTTGGTGTCATATATGAACG+TGG | - | chr8_2:19670330-19670349 | Msa1238830:intron | 40.0% |
! | GTCTTAACCCTCCGATTTTT+AGG | - | chr8_2:19670430-19670449 | Msa1238830:intron | 40.0% |
CAGTTTGTCCTAAAAATCGG+AGG | + | chr8_2:19670441-19670460 | None:intergenic | 40.0% | |
!!! | CTCCGATTTTTAGGACAAAC+TGG | - | chr8_2:19670439-19670458 | Msa1238830:intron | 40.0% |
!!! | TTTTTAGGACAAACTGGCAC+TGG | - | chr8_2:19670445-19670464 | Msa1238830:intron | 40.0% |
ATTTGTCCTAAGCATGTGGT+AGG | - | chr8_2:19670901-19670920 | Msa1238830:intron | 40.0% | |
! | ATCATTACCTGTGTTGGTAG+AGG | + | chr8_2:19671026-19671045 | None:intergenic | 40.0% |
CTACCAACACAGGTAATGAT+AGG | - | chr8_2:19671026-19671045 | Msa1238830:CDS | 40.0% | |
! | CGCAAAATTACACCACCTTT+TGG | + | chr8_2:19671341-19671360 | None:intergenic | 40.0% |
! | CAATGTAGATGTGTTGACGA+AGG | - | chr8_2:19671364-19671383 | Msa1238830:CDS | 40.0% |
TTGTAGCAGTCAAGCAATAC+TGG | - | chr8_2:19671468-19671487 | Msa1238830:CDS | 40.0% | |
!!! | TGTTAGTTTTGCTCTGTTGG+TGG | + | chr8_2:19671500-19671519 | None:intergenic | 40.0% |
!!! | CTGTGTTAGTTTTGCTCTGT+TGG | + | chr8_2:19671503-19671522 | None:intergenic | 40.0% |
CTGCGAACCAAGTTTGAAAA+TGG | + | chr8_2:19671807-19671826 | None:intergenic | 40.0% | |
!! | CATTTTCAAACTTGGTTCGC+AGG | - | chr8_2:19671805-19671824 | Msa1238830:intron | 40.0% |
! | GTTATGGTGGAAGCATATGG+AGG | + | chr8_2:19664320-19664339 | None:intergenic | 45.0% |
TAAACACGCGCCGTCTTTAA+TGG | + | chr8_2:19664415-19664434 | None:intergenic | 45.0% | |
TAGAGAGATGGTTCACATGG+CGG | + | chr8_2:19664445-19664464 | None:intergenic | 45.0% | |
CACCATGTGAGGATCAGAAA+AGG | - | chr8_2:19664473-19664492 | Msa1238830:CDS | 45.0% | |
! | GACCTTTTCTGATCCTCACA+TGG | + | chr8_2:19664478-19664497 | None:intergenic | 45.0% |
TGTAGAATACCAGCTCCGTT+TGG | - | chr8_2:19664568-19664587 | Msa1238830:intron | 45.0% | |
AGAATTGGGTCCGGTTCAAT+GGG | - | chr8_2:19664683-19664702 | Msa1238830:intron | 45.0% | |
! | ACCGCTATTGATACTGGTTG+TGG | - | chr8_2:19664811-19664830 | Msa1238830:CDS | 45.0% |
CCCACAACCAGTATCAATAG+CGG | + | chr8_2:19664815-19664834 | None:intergenic | 45.0% | |
! | CCGCTATTGATACTGGTTGT+GGG | - | chr8_2:19664812-19664831 | Msa1238830:CDS | 45.0% |
! | CGCTATTGATACTGGTTGTG+GGG | - | chr8_2:19664813-19664832 | Msa1238830:CDS | 45.0% |
TGTGACCAAACCCAATTGTG+TGG | + | chr8_2:19664944-19664963 | None:intergenic | 45.0% | |
CTTTGGTTGTGACCACACAA+TGG | - | chr8_2:19665023-19665042 | Msa1238830:intron | 45.0% | |
TGTGACCACACAATGGAGTT+TGG | - | chr8_2:19665030-19665049 | Msa1238830:intron | 45.0% | |
! | AAGTCTTAGATAGGGGCATG+GGG | - | chr8_2:19666066-19666085 | Msa1238830:intron | 45.0% |
! | AGTGACCGGAAGGAGTATAT+TGG | + | chr8_2:19666357-19666376 | None:intergenic | 45.0% |
TTGCTTATAACAGTGACCGG+AGG | - | chr8_2:19666483-19666502 | Msa1238830:CDS | 45.0% | |
TGCTTATAACAGTGACCGGA+GGG | - | chr8_2:19666484-19666503 | Msa1238830:CDS | 45.0% | |
CTCGCATCCATTAACATCAC+GGG | - | chr8_2:19666623-19666642 | Msa1238830:intron | 45.0% | |
AGGTACAAATTCTCGTGCCT+AGG | + | chr8_2:19666656-19666675 | None:intergenic | 45.0% | |
CAAAATGCGGCATCCTTTGA+AGG | - | chr8_2:19667011-19667030 | Msa1238830:intron | 45.0% | |
AGCAAAAATGCGGCATCCTT+TGG | - | chr8_2:19667060-19667079 | Msa1238830:intron | 45.0% | |
GCCATATCAAAGGCTCTTGA+AGG | + | chr8_2:19668177-19668196 | None:intergenic | 45.0% | |
TGAGCAGTGAGCCATATCAA+AGG | + | chr8_2:19668187-19668206 | None:intergenic | 45.0% | |
TTGATATGGCTCACTGCTCA+AGG | - | chr8_2:19668187-19668206 | Msa1238830:intron | 45.0% | |
AATGTACCATACTGTCCCCA+AGG | + | chr8_2:19668222-19668241 | None:intergenic | 45.0% | |
GACATGTGTCGTGTTCGATA+TGG | + | chr8_2:19668350-19668369 | None:intergenic | 45.0% | |
GATTAAGCGTGTTCAGGTGT+CGG | + | chr8_2:19668372-19668391 | None:intergenic | 45.0% | |
TCCAGAGTCTGTGTTTGTCT+CGG | - | chr8_2:19669086-19669105 | Msa1238830:intron | 45.0% | |
GTGGATACTGGATTCTGTCA+GGG | - | chr8_2:19669237-19669256 | Msa1238830:intron | 45.0% | |
AACTGGCAGAAACACTGGAA+AGG | - | chr8_2:19669269-19669288 | Msa1238830:intron | 45.0% | |
GCAGAAACACTGGAAAGGAT+GGG | - | chr8_2:19669274-19669293 | Msa1238830:intron | 45.0% | |
AACACTGGAAAGGATGGGAA+AGG | - | chr8_2:19669279-19669298 | Msa1238830:intron | 45.0% | |
GAAAGGATGGGAAAGGACTA+AGG | - | chr8_2:19669286-19669305 | Msa1238830:intron | 45.0% | |
TCCTGTGCTTCTTCACAGAA+GGG | + | chr8_2:19669461-19669480 | None:intergenic | 45.0% | |
ATCCTGTGCTTCTTCACAGA+AGG | + | chr8_2:19669462-19669481 | None:intergenic | 45.0% | |
! | AGAAGCACAGGATCCAGATA+TGG | - | chr8_2:19669469-19669488 | Msa1238830:intron | 45.0% |
TTCGGTTAAGAGTCCTGCAT+TGG | - | chr8_2:19669616-19669635 | Msa1238830:intron | 45.0% | |
TTATTGGACCATCCGCTATC+AGG | - | chr8_2:19669758-19669777 | Msa1238830:intron | 45.0% | |
!! | TTGACTAACCTGATAGCGGA+TGG | + | chr8_2:19669769-19669788 | None:intergenic | 45.0% |
!! | ATGTCTGGTCTTAGCCATGA+GGG | - | chr8_2:19669801-19669820 | Msa1238830:intron | 45.0% |
GACTAACTTCAATTCCCCCA+AGG | - | chr8_2:19670078-19670097 | Msa1238830:intron | 45.0% | |
CTCTGCTAGCTGAGAATCAA+GGG | + | chr8_2:19670190-19670209 | None:intergenic | 45.0% | |
ACTCTGCTAGCTGAGAATCA+AGG | + | chr8_2:19670191-19670210 | None:intergenic | 45.0% | |
GATTCTCAGCTAGCAGAGTT+AGG | - | chr8_2:19670192-19670211 | Msa1238830:intron | 45.0% | |
!! | CACTGGTTGATGATCCTGTT+TGG | - | chr8_2:19670268-19670287 | Msa1238830:intron | 45.0% |
GAGTGAATGTCGGATCAATC+AGG | + | chr8_2:19670547-19670566 | None:intergenic | 45.0% | |
GTCATAAGTTCGTGGGTAAG+TGG | + | chr8_2:19670977-19670996 | None:intergenic | 45.0% | |
! | TTTTCAGCCTCTACCAACAC+AGG | - | chr8_2:19671016-19671035 | Msa1238830:CDS | 45.0% |
! | GGAGAACATTCTTCTGGAGA+TGG | - | chr8_2:19671301-19671320 | Msa1238830:CDS | 45.0% |
! | ACATTCTTCTGGAGATGGAC+AGG | - | chr8_2:19671306-19671325 | Msa1238830:CDS | 45.0% |
! | TGGAGATGGACAGGATTTTG+CGG | - | chr8_2:19671315-19671334 | Msa1238830:CDS | 45.0% |
CATCGCAGATGAAATGCAGT+GGG | - | chr8_2:19671394-19671413 | Msa1238830:CDS | 45.0% | |
!! | AAAATCATATAATAATATTA+TGG | - | chr8_2:19665228-19665247 | Msa1238830:intron | 5.0% |
!! | AAATCATATAATAATATTAT+GGG | - | chr8_2:19665229-19665248 | Msa1238830:intron | 5.0% |
!!! | TTTTAATTTTTTTTTTCAAA+CGG | - | chr8_2:19665469-19665488 | Msa1238830:CDS | 5.0% |
!!! | TTTTTAATTGATTTTTTTAA+GGG | + | chr8_2:19666199-19666218 | None:intergenic | 5.0% |
!!! | ATTTTTAATTGATTTTTTTA+AGG | + | chr8_2:19666200-19666219 | None:intergenic | 5.0% |
!! | AAAAAATCAATTAAAAATAA+AGG | - | chr8_2:19666202-19666221 | Msa1238830:intron | 5.0% |
!! | AAAAATCAATTAAAAATAAA+GGG | - | chr8_2:19666203-19666222 | Msa1238830:intron | 5.0% |
!!! | TATATTAGAATTTTTTTTTT+TGG | + | chr8_2:19666852-19666871 | None:intergenic | 5.0% |
!! | ATAATTAAATAAAACTAAAA+AGG | - | chr8_2:19667391-19667410 | Msa1238830:intron | 5.0% |
GATAGTGATGCCAGAGACCA+AGG | + | chr8_2:19664231-19664250 | None:intergenic | 50.0% | |
! | ATGGTGGAAGCATATGGAGG+AGG | + | chr8_2:19664317-19664336 | None:intergenic | 50.0% |
! | GAAGTCGAGTGATGGAGTTG+TGG | + | chr8_2:19664365-19664384 | None:intergenic | 50.0% |
!! | TCTTTAATGGTGGGTCAGGG+AGG | + | chr8_2:19664402-19664421 | None:intergenic | 50.0% |
!! | CCGTCTTTAATGGTGGGTCA+GGG | + | chr8_2:19664405-19664424 | None:intergenic | 50.0% |
CCCTGACCCACCATTAAAGA+CGG | - | chr8_2:19664402-19664421 | Msa1238830:CDS | 50.0% | |
AGAGAGATGGTTCACATGGC+GGG | + | chr8_2:19664444-19664463 | None:intergenic | 50.0% | |
ACGGAGCTGGTATTCTACAC+CGG | + | chr8_2:19664567-19664586 | None:intergenic | 50.0% | |
TACCAGCTCCGTTTGGTTAC+CGG | - | chr8_2:19664575-19664594 | Msa1238830:intron | 50.0% | |
! | GTTACCGGTTACCATTACGG+TGG | - | chr8_2:19664590-19664609 | Msa1238830:intron | 50.0% |
CATTGAACCGGACCCAATTC+TGG | + | chr8_2:19664684-19664703 | None:intergenic | 50.0% | |
CAGAATTGGGTCCGGTTCAA+TGG | - | chr8_2:19664682-19664701 | Msa1238830:intron | 50.0% | |
! | TGAACCGGTTCCCATTGAAC+CGG | + | chr8_2:19664696-19664715 | None:intergenic | 50.0% |
ATTTGCGCCACGTGGAAACA+TGG | + | chr8_2:19664737-19664756 | None:intergenic | 50.0% | |
AACCGGGAGAAAGACTTGTG+TGG | - | chr8_2:19664911-19664930 | Msa1238830:intron | 50.0% | |
GTCCACACAAGTCTTTCTCC+CGG | + | chr8_2:19664916-19664935 | None:intergenic | 50.0% | |
GAGAAAGACTTGTGTGGACC+AGG | - | chr8_2:19664917-19664936 | Msa1238830:intron | 50.0% | |
TGGACCAGGACCACACAATT+GGG | - | chr8_2:19664931-19664950 | Msa1238830:intron | 50.0% | |
CAAACCCAATTGTGTGGTCC+TGG | + | chr8_2:19664938-19664957 | None:intergenic | 50.0% | |
CAGGACCACACAATTGGGTT+TGG | - | chr8_2:19664936-19664955 | Msa1238830:intron | 50.0% | |
AGGGACCAAACTCCATTGTG+TGG | + | chr8_2:19665038-19665057 | None:intergenic | 50.0% | |
GCCCCACTATCCTTAGAGTA+AGG | - | chr8_2:19666094-19666113 | Msa1238830:intron | 50.0% | |
ACATCACGGGAACTACACCT+AGG | - | chr8_2:19666636-19666655 | Msa1238830:intron | 50.0% | |
ACAATATCAGGTGGCAGTGG+CGG | - | chr8_2:19666801-19666820 | Msa1238830:intron | 50.0% | |
! | TATGAGAGAGAAGGGAGTGC+TGG | - | chr8_2:19667820-19667839 | Msa1238830:intron | 50.0% |
!! | AAGGGAGTGCTGGAGTAAGA+GGG | - | chr8_2:19667830-19667849 | Msa1238830:intron | 50.0% |
! | AATGGGAAAGGTTTGGGGCT+GGG | - | chr8_2:19667891-19667910 | Msa1238830:intron | 50.0% |
! | AGCTATGTATGGGCTGAGGT+GGG | + | chr8_2:19667991-19668010 | None:intergenic | 50.0% |
ACAGAGGCGGAGCTATGTAT+GGG | + | chr8_2:19668001-19668020 | None:intergenic | 50.0% | |
! | CGAGGTGTTCCTGCATTGAT+TGG | - | chr8_2:19668123-19668142 | Msa1238830:intron | 50.0% |
! | CTCAAGGTGCCTCATTCCTT+GGG | - | chr8_2:19668203-19668222 | Msa1238830:intron | 50.0% |
! | TCAAGGTGCCTCATTCCTTG+GGG | - | chr8_2:19668204-19668223 | Msa1238830:intron | 50.0% |
CATACTGTCCCCAAGGAATG+AGG | + | chr8_2:19668215-19668234 | None:intergenic | 50.0% | |
CTCATTCCTTGGGGACAGTA+TGG | - | chr8_2:19668213-19668232 | Msa1238830:intron | 50.0% | |
ACCGAGACAAACACAGACTC+TGG | + | chr8_2:19669090-19669109 | None:intergenic | 50.0% | |
! | GTTGATAGACTACTGCGTCC+TGG | - | chr8_2:19669215-19669234 | Msa1238830:intron | 50.0% |
GACAGAATCCAGTATCCACC+AGG | + | chr8_2:19669236-19669255 | None:intergenic | 50.0% | |
GGTGGATACTGGATTCTGTC+AGG | - | chr8_2:19669236-19669255 | Msa1238830:intron | 50.0% | |
TGTCAGGGCCACCAATAAAC+TGG | - | chr8_2:19669252-19669271 | Msa1238830:intron | 50.0% | |
GGCAGAAACACTGGAAAGGA+TGG | - | chr8_2:19669273-19669292 | Msa1238830:intron | 50.0% | |
! | ACCCTTCTGTGAAGAAGCAC+AGG | - | chr8_2:19669457-19669476 | Msa1238830:intron | 50.0% |
CACAGGATCCAGATATGGCT+TGG | - | chr8_2:19669474-19669493 | Msa1238830:intron | 50.0% | |
CATGGCTAAGACCAGACATC+TGG | + | chr8_2:19669800-19669819 | None:intergenic | 50.0% | |
!! | GATGTCTGGTCTTAGCCATG+AGG | - | chr8_2:19669800-19669819 | Msa1238830:intron | 50.0% |
GTTGTTTACCTCTGGCAGTG+GGG | + | chr8_2:19670015-19670034 | None:intergenic | 50.0% | |
CGTTGTTTACCTCTGGCAGT+GGG | + | chr8_2:19670016-19670035 | None:intergenic | 50.0% | |
ACGTTGTTTACCTCTGGCAG+TGG | + | chr8_2:19670017-19670036 | None:intergenic | 50.0% | |
AGTTCGTGGGTAAGTGGACA+TGG | + | chr8_2:19670971-19670990 | None:intergenic | 50.0% | |
! | GACAGGATTTTGCGGCCAAA+AGG | - | chr8_2:19671323-19671342 | Msa1238830:CDS | 50.0% |
! | AGGATTTTGCGGCCAAAAGG+TGG | - | chr8_2:19671326-19671345 | Msa1238830:CDS | 50.0% |
GCATCGCAGATGAAATGCAG+TGG | - | chr8_2:19671393-19671412 | Msa1238830:CDS | 50.0% | |
!! | AGAGGTGGTGGTGGAGTAAC+CGG | + | chr8_2:19664278-19664297 | None:intergenic | 55.0% |
GAAGCATATGGAGGAGGAGG+AGG | + | chr8_2:19664311-19664330 | None:intergenic | 55.0% | |
! | GTGGAAGCATATGGAGGAGG+AGG | + | chr8_2:19664314-19664333 | None:intergenic | 55.0% |
TGGAGTTGTGGTGGCTGTGA+TGG | + | chr8_2:19664353-19664372 | None:intergenic | 55.0% | |
! | GTCGAGTGATGGAGTTGTGG+TGG | + | chr8_2:19664362-19664381 | None:intergenic | 55.0% |
!! | TTAATGGTGGGTCAGGGAGG+TGG | + | chr8_2:19664399-19664418 | None:intergenic | 55.0% |
!! | GCCGTCTTTAATGGTGGGTC+AGG | + | chr8_2:19664406-19664425 | None:intergenic | 55.0% |
CACGCGCCGTCTTTAATGGT+GGG | + | chr8_2:19664411-19664430 | None:intergenic | 55.0% | |
ACACGCGCCGTCTTTAATGG+TGG | + | chr8_2:19664412-19664431 | None:intergenic | 55.0% | |
GTAAGGGACAGTGTCTCTCC+CGG | + | chr8_2:19664531-19664550 | None:intergenic | 55.0% | |
GGAGAGACACTGTCCCTTAC+CGG | - | chr8_2:19664531-19664550 | Msa1238830:intron | 55.0% | |
AACCGGTAACCAAACGGAGC+TGG | + | chr8_2:19664580-19664599 | None:intergenic | 55.0% | |
TTGCATACCAAGCCGCGTCA+CGG | + | chr8_2:19664624-19664643 | None:intergenic | 55.0% | |
! | GGTTCAATGGGAACCGGTTC+AGG | - | chr8_2:19664695-19664714 | Msa1238830:intron | 55.0% |
ACGTATGCATTTGCGCCACG+TGG | + | chr8_2:19664745-19664764 | None:intergenic | 55.0% | |
GTGGACCAGGACCACACAAT+TGG | - | chr8_2:19664930-19664949 | Msa1238830:intron | 55.0% | |
!! | GAAGGGAGTGCTGGAGTAAG+AGG | - | chr8_2:19667829-19667848 | Msa1238830:intron | 55.0% |
! | GAATGGGAAAGGTTTGGGGC+TGG | - | chr8_2:19667890-19667909 | Msa1238830:intron | 55.0% |
!! | TTGGGGCTGGGTGGGTTATT+TGG | - | chr8_2:19667903-19667922 | Msa1238830:intron | 55.0% |
! | GAGCTATGTATGGGCTGAGG+TGG | + | chr8_2:19667992-19668011 | None:intergenic | 55.0% |
GACAGAGGCGGAGCTATGTA+TGG | + | chr8_2:19668002-19668021 | None:intergenic | 55.0% | |
TACATAGCTCCGCCTCTGTC+AGG | - | chr8_2:19668002-19668021 | Msa1238830:intron | 55.0% | |
AACTTGCCACCTGACAGAGG+CGG | + | chr8_2:19668014-19668033 | None:intergenic | 55.0% | |
CCTCTGTCAGGTGGCAAGTT+GGG | - | chr8_2:19668014-19668033 | Msa1238830:intron | 55.0% | |
CTCTGTCAGGTGGCAAGTTG+GGG | - | chr8_2:19668015-19668034 | Msa1238830:intron | 55.0% | |
! | GCTCAAGGTGCCTCATTCCT+TGG | - | chr8_2:19668202-19668221 | Msa1238830:intron | 55.0% |
AACGGACACCTGACACGACA+CGG | - | chr8_2:19668275-19668294 | Msa1238830:intron | 55.0% | |
GATAGACTACTGCGTCCTGG+TGG | - | chr8_2:19669218-19669237 | Msa1238830:intron | 55.0% | |
! | TACTGCGTCCTGGTGGATAC+TGG | - | chr8_2:19669225-19669244 | Msa1238830:intron | 55.0% |
!! | GTAACCGGTGGCGGAGATGA+CGG | + | chr8_2:19664263-19664282 | None:intergenic | 60.0% |
ATGGAGGAGGAGGAGGAGGA+GGG | + | chr8_2:19664304-19664323 | None:intergenic | 60.0% | |
TATGGAGGAGGAGGAGGAGG+AGG | + | chr8_2:19664305-19664324 | None:intergenic | 60.0% | |
GCATATGGAGGAGGAGGAGG+AGG | + | chr8_2:19664308-19664327 | None:intergenic | 60.0% | |
GTGGCGGTGAAGTCGAGTGA+TGG | + | chr8_2:19664373-19664392 | None:intergenic | 60.0% | |
! | GAGATGGTTCACATGGCGGG+AGG | + | chr8_2:19664441-19664460 | None:intergenic | 60.0% |
GAGACACTGTCCCTTACCGG+AGG | - | chr8_2:19664534-19664553 | Msa1238830:intron | 60.0% | |
CGGAGAGTCTCCTCCGGTAA+GGG | + | chr8_2:19664547-19664566 | None:intergenic | 60.0% | |
CCTTACCGGAGGAGACTCTC+CGG | - | chr8_2:19664545-19664564 | Msa1238830:intron | 60.0% | |
CTACACCGGAGAGTCTCCTC+CGG | + | chr8_2:19664553-19664572 | None:intergenic | 60.0% | |
CCGGCCACCGTAATGGTAAC+CGG | + | chr8_2:19664597-19664616 | None:intergenic | 60.0% | |
CCGGTTACCATTACGGTGGC+CGG | - | chr8_2:19664594-19664613 | Msa1238830:intron | 60.0% | |
GGGTCCGGTTCAATGGGAAC+CGG | - | chr8_2:19664689-19664708 | Msa1238830:intron | 60.0% | |
! | TGGGAACCGGTTCAGGTTCC+CGG | - | chr8_2:19664702-19664721 | Msa1238830:intron | 60.0% |
GAAACATGGTCCCACCACCC+GGG | + | chr8_2:19664723-19664742 | None:intergenic | 60.0% | |
GGAAACATGGTCCCACCACC+CGG | + | chr8_2:19664724-19664743 | None:intergenic | 60.0% | |
GGTGGGACCATGTTTCCACG+TGG | - | chr8_2:19664727-19664746 | Msa1238830:intron | 60.0% | |
GGAGGTCGGGGTTCGAATCT+CGG | - | chr8_2:19666286-19666305 | Msa1238830:intron | 60.0% | |
! | GGAAAGGTTTGGGGCTGGGT+GGG | - | chr8_2:19667895-19667914 | Msa1238830:intron | 60.0% |
! | GCGGAGCTATGTATGGGCTG+AGG | + | chr8_2:19667995-19668014 | None:intergenic | 60.0% |
ATAGCTCCGCCTCTGTCAGG+TGG | - | chr8_2:19668005-19668024 | Msa1238830:intron | 60.0% | |
GCCTCTGTCAGGTGGCAAGT+TGG | - | chr8_2:19668013-19668032 | Msa1238830:intron | 60.0% | |
CCCAACTTGCCACCTGACAG+AGG | + | chr8_2:19668017-19668036 | None:intergenic | 60.0% | |
GTCAGTGTCCGTGTCGTGTC+AGG | + | chr8_2:19668286-19668305 | None:intergenic | 60.0% | |
CTCTGGCAGTGGGGTCAAAC+AGG | + | chr8_2:19670006-19670025 | None:intergenic | 60.0% | |
CTGTTTGACCCCACTGCCAG+AGG | - | chr8_2:19670004-19670023 | Msa1238830:intron | 60.0% | |
AGGAGGCTTTGCAGCTGCAC+TGG | - | chr8_2:19670251-19670270 | Msa1238830:intron | 60.0% | |
!! | GCGGAGATGACGGTGGTGGA+AGG | + | chr8_2:19664253-19664272 | None:intergenic | 65.0% |
ACCACCGTCATCTCCGCCAC+CGG | - | chr8_2:19664256-19664275 | Msa1238830:three_prime_UTR | 65.0% | |
!! | GGTGGTGGAGTAACCGGTGG+CGG | + | chr8_2:19664272-19664291 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGAGTAACCGG+TGG | + | chr8_2:19664275-19664294 | None:intergenic | 65.0% |
! | GGAGGGTTGAGAGGTGGTGG+TGG | + | chr8_2:19664287-19664306 | None:intergenic | 65.0% |
GGAGGAGGGTTGAGAGGTGG+TGG | + | chr8_2:19664290-19664309 | None:intergenic | 65.0% | |
GGAGGAGGAGGGTTGAGAGG+TGG | + | chr8_2:19664293-19664312 | None:intergenic | 65.0% | |
GGAGGAGGAGGAGGGTTGAG+AGG | + | chr8_2:19664296-19664315 | None:intergenic | 65.0% | |
GTCAGGGAGGTGGTGAGTGG+CGG | + | chr8_2:19664389-19664408 | None:intergenic | 65.0% | |
TGGGTCAGGGAGGTGGTGAG+TGG | + | chr8_2:19664392-19664411 | None:intergenic | 65.0% | |
CCGGAGAGTCTCCTCCGGTA+AGG | + | chr8_2:19664548-19664567 | None:intergenic | 65.0% | |
! | GGGAACCGGTTCAGGTTCCC+GGG | - | chr8_2:19664703-19664722 | Msa1238830:intron | 65.0% |
! | AACCGGTTCAGGTTCCCGGG+TGG | - | chr8_2:19664706-19664725 | Msa1238830:intron | 65.0% |
CACCACCCGGGAACCTGAAC+CGG | + | chr8_2:19664711-19664730 | None:intergenic | 65.0% | |
! | GGTTCAGGTTCCCGGGTGGT+GGG | - | chr8_2:19664710-19664729 | Msa1238830:intron | 65.0% |
! | GGGAAAGGTTTGGGGCTGGG+TGG | - | chr8_2:19667894-19667913 | Msa1238830:intron | 65.0% |
!! | CGAATTTTGGGGGTGGGCCG+TGG | - | chr8_2:19667965-19667984 | Msa1238830:intron | 65.0% |
! | GTATGGGCTGAGGTGGGCCA+CGG | + | chr8_2:19667985-19668004 | None:intergenic | 65.0% |
!! | GGTGGCGGAGATGACGGTGG+TGG | + | chr8_2:19664257-19664276 | None:intergenic | 70.0% |
!! | ACCGGTGGCGGAGATGACGG+TGG | + | chr8_2:19664260-19664279 | None:intergenic | 70.0% |
CGGCTCTCCGGCCACCGTAA+TGG | + | chr8_2:19664604-19664623 | None:intergenic | 70.0% | |
CAAGCCGCGTCACGGCTCTC+CGG | + | chr8_2:19664616-19664635 | None:intergenic | 70.0% | |
! | CGGTTCAGGTTCCCGGGTGG+TGG | - | chr8_2:19664709-19664728 | Msa1238830:intron | 70.0% |
GTGGCCGGAGAGCCGTGACG+CGG | - | chr8_2:19664609-19664628 | Msa1238830:intron | 75.0% | |
CGGAGAGCCGTGACGCGGCT+TGG | - | chr8_2:19664614-19664633 | Msa1238830:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 19663973 | 19671843 | 19663973 | ID=Msa1238830;Name=Msa1238830 |
chr8_2 | mRNA | 19663973 | 19671843 | 19663973 | ID=Msa1238830-mRNA-1;Parent=Msa1238830;Name=Msa1238830-mRNA-1;_AED=0.29;_eAED=0.29;_QI=81|0.75|0.77|1|0.75|0.55|9|305|636 |
chr8_2 | exon | 19663973 | 19664140 | 19663973 | ID=Msa1238830-mRNA-1:exon:7265;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19664162 | 19664524 | 19664162 | ID=Msa1238830-mRNA-1:exon:7264;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19664779 | 19664856 | 19664779 | ID=Msa1238830-mRNA-1:exon:7263;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19665350 | 19665681 | 19665350 | ID=Msa1238830-mRNA-1:exon:7262;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19665791 | 19665830 | 19665791 | ID=Msa1238830-mRNA-1:exon:7261;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19666321 | 19666621 | 19666321 | ID=Msa1238830-mRNA-1:exon:7260;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19667582 | 19667792 | 19667582 | ID=Msa1238830-mRNA-1:exon:7259;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19670982 | 19671760 | 19670982 | ID=Msa1238830-mRNA-1:exon:7258;Parent=Msa1238830-mRNA-1 |
chr8_2 | exon | 19671819 | 19671843 | 19671819 | ID=Msa1238830-mRNA-1:exon:7257;Parent=Msa1238830-mRNA-1 |
chr8_2 | five_prime_UTR | 19671819 | 19671843 | 19671819 | ID=Msa1238830-mRNA-1:five_prime_utr;Parent=Msa1238830-mRNA-1 |
chr8_2 | five_prime_UTR | 19671705 | 19671760 | 19671705 | ID=Msa1238830-mRNA-1:five_prime_utr;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19670982 | 19671704 | 19670982 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19667582 | 19667792 | 19667582 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19666321 | 19666621 | 19666321 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19665791 | 19665830 | 19665791 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19665350 | 19665681 | 19665350 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19664779 | 19664856 | 19664779 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | CDS | 19664299 | 19664524 | 19664299 | ID=Msa1238830-mRNA-1:cds;Parent=Msa1238830-mRNA-1 |
chr8_2 | three_prime_UTR | 19664162 | 19664298 | 19664162 | ID=Msa1238830-mRNA-1:three_prime_utr;Parent=Msa1238830-mRNA-1 |
chr8_2 | three_prime_UTR | 19663973 | 19664140 | 19663973 | ID=Msa1238830-mRNA-1:three_prime_utr;Parent=Msa1238830-mRNA-1 |
Gene Sequence |
Protein sequence |