AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0915550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0915550 MtrunA17_Chr6g0470571 96.343 957 33 1 1 955 1 957 0.0 1886
Msa0915550 MtrunA17_Chr5g0422381 32.836 402 262 4 415 813 144 540 9.73e-60 214
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0915550 AT5G23890.1 46.957 986 444 25 1 949 1 944 0.0 741
Msa0915550 AT5G23890.2 47.958 857 377 20 125 949 1 820 0.0 683
Msa0915550 AT5G52410.2 57.514 539 198 5 410 924 224 755 0.0 597
Msa0915550 AT5G52410.2 35.772 123 59 5 1 117 1 109 6.51e-11 67.0
Msa0915550 AT5G52410.3 57.514 539 198 5 410 924 215 746 0.0 596
Msa0915550 AT5G52410.3 35.772 123 59 5 1 117 1 109 5.49e-11 67.0
Msa0915550 AT5G52410.1 58.383 507 183 4 442 924 2 504 0.0 573
Msa0915550 AT3G25680.1 35.219 389 244 3 427 813 171 553 8.09e-63 223

Find 228 sgRNAs with CRISPR-Local

Find 603 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTTCGCTTAAAATCTT+AGG 0.129669 6_2:+31964894 None:intergenic
CAGATGCTGCACCGACTTTC+TGG 0.137059 6_2:-31961985 Msa0915550:CDS
TACTGGCTTACCATCATAAT+TGG 0.190822 6_2:+31965070 None:intergenic
AAGATTCCTTCTTCTTCTTC+TGG 0.201471 6_2:+31967527 None:intergenic
ATTTCTGAATCTCCAAATTC+TGG 0.205362 6_2:-31964714 Msa0915550:CDS
CTAGTAGCTGATCTTTCTTC+TGG 0.206191 6_2:-31961919 Msa0915550:CDS
AAATTACAGGCTGAAGAATT+TGG 0.211510 6_2:-31959737 Msa0915550:CDS
TCTTCTTCCCTCTCTCTTCA+TGG 0.214615 6_2:-31967788 Msa0915550:exon
TAACTTTCCATAACTGTCTT+TGG 0.218158 6_2:-31959411 Msa0915550:three_prime_UTR
AGTAGTTTCTGCAGCTTTAC+AGG 0.219788 6_2:-31964655 Msa0915550:CDS
CATCCTGCTGCTCATTATTA+AGG 0.228977 6_2:+31965045 None:intergenic
CAGCATAGTGCCGTCGAATT+TGG 0.233489 6_2:-31959671 Msa0915550:CDS
AGAATACTGATTTACTTAAA+TGG 0.242313 6_2:+31964802 None:intergenic
TGACAGGGCTGAAAGCTTAT+TGG 0.253989 6_2:-31959876 Msa0915550:CDS
TCTTCTGATGCCGATATTAC+AGG 0.260713 6_2:-31965491 Msa0915550:CDS
GAGAAAAGGGATCCAGAATT+TGG 0.266196 6_2:+31964702 None:intergenic
TCACCAAGAACATACCTTTC+AGG 0.266855 6_2:+31962393 None:intergenic
TGAACTTATGAGCGAACTTT+TGG 0.268578 6_2:+31959582 None:intergenic
TTTCTGGTTCAGCATTAAAT+TGG 0.274007 6_2:+31965099 None:intergenic
CTTTCAGGGGAGAAGTAAAA+AGG 0.280105 6_2:+31962408 None:intergenic
AAGAAGAAGAAGGAATCTTT+TGG 0.292775 6_2:-31967523 Msa0915550:CDS
ACAAGATCCTGGCGCGATAA+AGG 0.293222 6_2:+31962153 None:intergenic
TTTCAGTTTGAAGTGGTATT+TGG 0.300010 6_2:+31965201 None:intergenic
AACTCAGTAAACTACATTTC+TGG 0.304967 6_2:+31959493 None:intergenic
GGTTGGTCCGATTCAGCAAC+TGG 0.306448 6_2:-31967568 Msa0915550:CDS
ATAGTCACCTTGAATGTTAT+CGG 0.317196 6_2:+31965379 None:intergenic
TCCAAGAGATAAGGCAAAAT+AGG 0.322176 6_2:+31965699 None:intergenic
GGATCTTGTCAGCTGGAAAA+TGG 0.323426 6_2:-31962139 Msa0915550:CDS
GGAGCAAGAAAATGGTAAAT+TGG 0.328498 6_2:-31965444 Msa0915550:CDS
GCAACCTTTCTGTCAGCTTC+AGG 0.332101 6_2:+31962096 None:intergenic
GGAATAATTGCTCTTGCATT+TGG 0.338900 6_2:-31961889 Msa0915550:intron
TGCTTGTTCTCTCACTCGTT+TGG 0.340913 6_2:+31960036 None:intergenic
TCCAAAACCTCATCTGGTTT+AGG 0.343552 6_2:-31964984 Msa0915550:CDS
CCTCTAGATCATACTGTAAA+CGG 0.344200 6_2:+31961226 None:intergenic
ACTATTGATGATTCTGATAT+AGG 0.344484 6_2:-31965353 Msa0915550:CDS
GATATTTCCAAAACCTCATC+TGG 0.348534 6_2:-31964990 Msa0915550:CDS
GGCCTCCAAAACAAAATTAC+AGG 0.351209 6_2:-31959750 Msa0915550:CDS
GTTGTGGGAGTAGGAGTTGC+TGG 0.351961 6_2:-31965745 Msa0915550:CDS
ATTTACTTGTCCTGTAATAT+CGG 0.352628 6_2:+31965481 None:intergenic
GCAGGAATCAAAACCTTTCC+TGG 0.353974 6_2:+31964627 None:intergenic
AACAAGTTGGAGCAAGAAAA+TGG 0.356887 6_2:-31965452 Msa0915550:CDS
CTGATCATCTAATGATGAAT+TGG 0.359092 6_2:+31964770 None:intergenic
TTCTAAAGGTGATGGGTTAT+CGG 0.359699 6_2:-31967590 Msa0915550:CDS
CCAATTTATATCAAAATTGA+AGG 0.360066 6_2:-31959777 Msa0915550:CDS
CAAAAGCTCCTGTTCATAAC+TGG 0.363297 6_2:+31961521 None:intergenic
TTACTTAAATGGTAATTTCC+AGG 0.366462 6_2:+31964813 None:intergenic
ACCTAAACCAGATGAGGTTT+TGG 0.372911 6_2:+31964983 None:intergenic
GAAGGTACAAAGCGAGTTGC+TGG 0.388206 6_2:-31959635 Msa0915550:CDS
ATTTCTAATCTCACTTGAAC+TGG 0.390712 6_2:+31965016 None:intergenic
TTTCCAGGCTTGGCAGAAGC+TGG 0.396329 6_2:-31962492 Msa0915550:intron
AGCAAGGGCAATAGCGGCTT+GGG 0.396547 6_2:+31961665 None:intergenic
TTATCTCTTGGAAAACGAAA+TGG 0.397448 6_2:-31965688 Msa0915550:CDS
GCCGCTATTGCCCTTGCTAC+TGG 0.401253 6_2:-31961660 Msa0915550:CDS
AAGAGAGGATCAAGAAGCTT+CGG 0.401995 6_2:-31961281 Msa0915550:CDS
CAATTCATCATTAGATGATC+AGG 0.410592 6_2:-31964769 Msa0915550:CDS
CTGCTAGCGGTGCTCTTTCA+AGG 0.412353 6_2:-31962812 Msa0915550:intron
AAAGTTAAGGAATGAGGTTC+AGG 0.412432 6_2:-31961352 Msa0915550:CDS
TAGTAGCTGATCTTTCTTCT+GGG 0.414299 6_2:-31961918 Msa0915550:CDS
TGATCTTTCTTCTGGGGAGC+AGG 0.415092 6_2:-31961911 Msa0915550:CDS
CAACTCAAGGGTCAGTTGAC+AGG 0.415518 6_2:-31959892 Msa0915550:CDS
AGAACAAGCAAGAGCATTAG+AGG 0.416242 6_2:-31960023 Msa0915550:CDS
GAAAGATCAGCTACTAGTGC+AGG 0.416302 6_2:+31961925 None:intergenic
GAAGATGATCAAGACAATAT+TGG 0.419569 6_2:-31964879 Msa0915550:CDS
AATGACACAGCCTCTGTGTC+TGG 0.422921 6_2:+31959442 None:intergenic
AGATTCCTTCTTCTTCTTCT+GGG 0.423936 6_2:+31967528 None:intergenic
ACGCCAAGGCCGGCTCTGAA+TGG 0.424465 6_2:-31967624 Msa0915550:CDS
CCTGAGTCCGATAACATTCA+AGG 0.424789 6_2:-31965386 Msa0915550:CDS
TATATCAAAATTGAAGGAAT+GGG 0.425466 6_2:-31959771 Msa0915550:CDS
CAGTGACCCAGTTGCTGAAT+CGG 0.427895 6_2:+31967561 None:intergenic
CATCTTCGCTTAAAATCTTA+GGG 0.430588 6_2:+31964895 None:intergenic
GTGTCTGGTGTCTCTATTGA+AGG 0.431733 6_2:+31959457 None:intergenic
AGAAGAAGACAGTGTTGCCT+TGG 0.434500 6_2:-31961418 Msa0915550:CDS
GACCCATTCAGAGCCGGCCT+TGG 0.436320 6_2:+31967621 None:intergenic
AGAGGAGGCTAGAGATCGTT+GGG 0.438647 6_2:-31960005 Msa0915550:CDS
ACTAGTGCAGGGCATGCATT+AGG 0.440026 6_2:+31961937 None:intergenic
GAAGTTACATGGCTCAATGC+TGG 0.440097 6_2:-31959926 Msa0915550:CDS
TGCTCATTATTAAGGTCTAC+TGG 0.440726 6_2:+31965053 None:intergenic
TGGTGGGGTTGAAGGCTAAT+CGG 0.442642 6_2:+31967725 None:intergenic
CGCCAAGGCCGGCTCTGAAT+GGG 0.442924 6_2:-31967623 Msa0915550:CDS
CTTTCAGGAGTTGTGGGAGT+AGG 0.444823 6_2:-31965754 Msa0915550:intron
TGTCAAGTTCTGACCTTGAA+TGG 0.445130 6_2:+31962579 None:intergenic
TCTAAAGGTGATGGGTTATC+GGG 0.447165 6_2:-31967589 Msa0915550:CDS
CGATTCAGCAACTGGGTCAC+TGG 0.449043 6_2:-31967560 Msa0915550:CDS
TGGCCTTAACAAAACTCAAC+AGG 0.451309 6_2:-31964859 Msa0915550:CDS
CTGCAGCCCTTTATCGCGCC+AGG 0.451648 6_2:-31962160 Msa0915550:intron
AGCGAGTTGCTGGTGATTGT+AGG 0.453284 6_2:-31959625 Msa0915550:CDS
AGACACAGAGGCTGTGTCAT+TGG 0.455512 6_2:-31959440 Msa0915550:three_prime_UTR
CTCTAGATCATACTGTAAAC+GGG 0.455789 6_2:+31961227 None:intergenic
TGCGGCTATTGAATCAGAAA+TGG 0.457851 6_2:-31961385 Msa0915550:CDS
TAGCAAGGGCAATAGCGGCT+TGG 0.459860 6_2:+31961664 None:intergenic
AAATCACCAGGTTGAACATC+AGG 0.461055 6_2:+31962870 None:intergenic
TATTAATGCCAGTTATGAAC+AGG 0.463586 6_2:-31961529 Msa0915550:CDS
GAATGCCAGGAGCAGAGAAA+AGG 0.464135 6_2:+31964688 None:intergenic
CACCAAGAACATACCTTTCA+GGG 0.466229 6_2:+31962394 None:intergenic
AGAGAGGATCAAGAAGCTTC+GGG 0.466699 6_2:-31961280 Msa0915550:CDS
ACTGATAGCAATTGTAATTG+AGG 0.468930 6_2:-31959341 Msa0915550:three_prime_UTR
TTATATCAAAATTGAAGGAA+TGG 0.469067 6_2:-31959772 Msa0915550:CDS
TTGTCACAGGTTTATCTGGT+TGG 0.469952 6_2:+31961691 None:intergenic
AGGCCGGCTCTGAATGGGTC+GGG 0.471957 6_2:-31967618 Msa0915550:CDS
TGACTTGCCTGCCTTTGAGA+TGG 0.477195 6_2:+31959706 None:intergenic
GAAATTGTGTTGTTTGACTC+AGG 0.477685 6_2:+31964921 None:intergenic
TGATCATCCAAAGACAGTTA+TGG 0.481315 6_2:+31959404 None:intergenic
TAGTTTGCTTTCAGGAGTTG+TGG 0.483993 6_2:-31965761 Msa0915550:intron
GGGTCTGATTCTAAAGGTGA+TGG 0.486869 6_2:-31967598 Msa0915550:CDS
AGTGGCATCATTGATACCAT+TGG 0.492279 6_2:+31965298 None:intergenic
TACTTAAATGGTAATTTCCA+GGG 0.494569 6_2:+31964814 None:intergenic
AAGTTACATGGCTCAATGCT+GGG 0.495523 6_2:-31959925 Msa0915550:CDS
TTTGGATTAACTGTAAAAGA+AGG 0.497057 6_2:-31959653 Msa0915550:CDS
ACTGATGGAGCAGGAATGCC+AGG 0.497805 6_2:+31964675 None:intergenic
AACTCAACAGGTCTTATATG+AGG 0.501563 6_2:-31964847 Msa0915550:CDS
ACTGGCTTACCATCATAATT+GGG 0.503200 6_2:+31965071 None:intergenic
AATGCCAGGAGCAGAGAAAA+GGG 0.505227 6_2:+31964689 None:intergenic
TAATAACATTTGAGTAATAA+CGG 0.505629 6_2:+31959287 None:intergenic
GAAGCCTTTGACAACACATC+AGG 0.506026 6_2:-31965525 Msa0915550:CDS
AGACCTTAATAATGAGCAGC+AGG 0.511809 6_2:-31965048 Msa0915550:CDS
TAGAGGAGGCTAGAGATCGT+TGG 0.514166 6_2:-31960006 Msa0915550:CDS
TATGAGGAACAGAGTATCCC+TGG 0.516671 6_2:-31964831 Msa0915550:CDS
AGTTTGCTTTCAGGAGTTGT+GGG 0.517953 6_2:-31965760 Msa0915550:intron
TGGAATCAGGACTTGGGCAG+AGG 0.518677 6_2:-31960065 Msa0915550:intron
TACAGTTAATCCAAATTCGA+CGG 0.518733 6_2:+31959661 None:intergenic
TGAACCTGATCAAAAGCTGC+AGG 0.521188 6_2:+31964609 None:intergenic
AGGCTTCAGCCGAAGTTACA+TGG 0.522394 6_2:-31959937 Msa0915550:CDS
TGACAGGAGAAAGTACTTCA+AGG 0.522750 6_2:+31959186 None:intergenic
GATCTTTCTTCTGGGGAGCA+GGG 0.527714 6_2:-31961910 Msa0915550:CDS
TTGGAGAAGCTCAAACGAAT+GGG 0.528805 6_2:-31959857 Msa0915550:CDS
CAAAGAAGTGGTGGAAGACG+AGG 0.530929 6_2:+31967658 None:intergenic
GCGAGTTGCTGGTGATTGTA+GGG 0.532203 6_2:-31959624 Msa0915550:CDS
TTTACAGGTGCCTCCAGGAA+AGG 0.532486 6_2:-31964640 Msa0915550:CDS
AGTCTGACGTGATGAGAAAG+AGG 0.539581 6_2:+31967697 None:intergenic
AACTCAAGGGTCAGTTGACA+GGG 0.540042 6_2:-31959891 Msa0915550:CDS
GCAGCTTTACAGGTGCCTCC+AGG 0.540450 6_2:-31964645 Msa0915550:CDS
AAGCTGGACTTATTGAAAGC+AGG 0.543112 6_2:-31962476 Msa0915550:CDS
AATCGGAGTTGAAGAGAAGT+TGG 0.544703 6_2:+31967742 None:intergenic
CGCTGGTTGGTATCTGCTAG+CGG 0.545213 6_2:-31962825 Msa0915550:CDS
GCCGGCCTTGGCGTTATGCA+CGG 0.546961 6_2:+31967633 None:intergenic
TGAAGAGGCAAAACATGAGT+TGG 0.547136 6_2:-31961460 Msa0915550:CDS
CTTGTTGCATGAGTCAGCTC+GGG 0.547834 6_2:-31965252 Msa0915550:CDS
GAAAAGCCTTGTCCATGGCC+AGG 0.548184 6_2:-31961197 Msa0915550:intron
GAAAACATACCCAATTATGA+TGG 0.549370 6_2:-31965080 Msa0915550:CDS
GCATTATCTATGTACATGGC+AGG 0.549375 6_2:+31962652 None:intergenic
TAAGGCAAAATAGGTAAGCC+CGG 0.551085 6_2:+31965708 None:intergenic
CCGTTTACAGTATGATCTAG+AGG 0.551417 6_2:-31961226 Msa0915550:CDS
CAAACAATAACAGATTTGAT+AGG 0.553612 6_2:-31959219 Msa0915550:three_prime_UTR
GCTTCCTGAAGCTGACAGAA+AGG 0.553773 6_2:-31962100 Msa0915550:intron
GGGGAGCAGTACTCAACTCA+AGG 0.554003 6_2:-31959905 Msa0915550:CDS
ACCTCCTGATGTGTTGTCAA+AGG 0.557320 6_2:+31965521 None:intergenic
GTATATTAAAGATGCTGTGA+GGG 0.557652 6_2:+31959538 None:intergenic
CAAGAAAATGGTAAATTGGA+AGG 0.558455 6_2:-31965440 Msa0915550:CDS
TCTAATGATGAATTGGTCAA+TGG 0.560047 6_2:+31964777 None:intergenic
GAAGCTGCCATCTCAAAGGC+AGG 0.560559 6_2:-31959713 Msa0915550:CDS
ACTTGTTGCATGAGTCAGCT+CGG 0.560612 6_2:-31965253 Msa0915550:CDS
AAGGCCGGCTCTGAATGGGT+CGG 0.563902 6_2:-31967619 Msa0915550:CDS
ACTCAGGAGATGAATAATCC+CGG 0.564022 6_2:+31965402 None:intergenic
AGACCCGACCCATTCAGAGC+CGG 0.565507 6_2:+31967615 None:intergenic
AGCATTGAGCCATGTAACTT+CGG 0.566469 6_2:+31959928 None:intergenic
ATTGGAGAAGCTCAAACGAA+TGG 0.567266 6_2:-31959858 Msa0915550:CDS
TTCTGATATAGGATCGGAGT+TGG 0.568382 6_2:-31965342 Msa0915550:CDS
GGCAAATGTTGAATTACAGC+AGG 0.568602 6_2:+31959308 None:intergenic
GGCATCATTGATACCATTGG+AGG 0.569021 6_2:+31965301 None:intergenic
CGACGTGTGCATAAATCACC+AGG 0.569114 6_2:+31962858 None:intergenic
GCAGAAACTACTGATGGAGC+AGG 0.569460 6_2:+31964666 None:intergenic
TCGTGAATATGCTCGCTGGT+TGG 0.572821 6_2:-31962838 Msa0915550:CDS
CCTTGAATGTTATCGGACTC+AGG 0.575875 6_2:+31965386 None:intergenic
AAGGTCAGATAGATACATCC+CGG 0.576945 6_2:-31965421 Msa0915550:CDS
CAGAAGCATCTCCAGTAGCA+AGG 0.578725 6_2:+31961649 None:intergenic
GGCACTATGCTGTAACTCGT+GGG 0.579849 6_2:+31959682 None:intergenic
CTCAGGAGATGAATAATCCC+GGG 0.581010 6_2:+31965403 None:intergenic
AAGGTGATGGGTTATCGGGT+TGG 0.582273 6_2:-31967585 Msa0915550:CDS
AGCCGCACGTTCTTTCTCCA+AGG 0.583452 6_2:+31961401 None:intergenic
AGTAAATGCTGAGAACAAGT+TGG 0.583946 6_2:-31965465 Msa0915550:CDS
TCCAGTAGCAAGGGCAATAG+CGG 0.586351 6_2:+31961659 None:intergenic
TGATTCCCAGAAGAAGAAGA+AGG 0.587923 6_2:-31967533 Msa0915550:CDS
AGTAGCTGATCTTTCTTCTG+GGG 0.590948 6_2:-31961917 Msa0915550:CDS
TTGAACAGATATATATTCAG+TGG 0.591238 6_2:+31965280 None:intergenic
TTGCTCCGTGCATAACGCCA+AGG 0.591537 6_2:-31967638 Msa0915550:CDS
ATTGTTTGGAATCAGGACTT+GGG 0.596942 6_2:-31960071 Msa0915550:intron
ATCAGCACCTAAACCAGATG+AGG 0.597185 6_2:+31964977 None:intergenic
AATTGACAAGATCATCCTCA+TGG 0.597415 6_2:-31959804 Msa0915550:CDS
GTCTGACGTGATGAGAAAGA+GGG 0.599108 6_2:+31967698 None:intergenic
AGTAGCATTATCTATGTACA+TGG 0.600902 6_2:+31962648 None:intergenic
AGAAGCATCTCCAGTAGCAA+GGG 0.602025 6_2:+31961650 None:intergenic
TGTCTATAAAACCAGAAAGT+CGG 0.602692 6_2:+31961974 None:intergenic
CGGCTGAAGCCTCCTTGCGG+AGG 0.602998 6_2:+31959948 None:intergenic
TGGGTCGGGTCTGATTCTAA+AGG 0.603756 6_2:-31967604 Msa0915550:CDS
TGAACGAAAAGCCTTGTCCA+TGG 0.606463 6_2:-31961202 Msa0915550:CDS
GTTGGTCCGATTCAGCAACT+GGG 0.606734 6_2:-31967567 Msa0915550:CDS
TGGAGAAGCTGCCATCTCAA+AGG 0.608787 6_2:-31959717 Msa0915550:CDS
TGCACGGAGCAAAGAAGTGG+TGG 0.608863 6_2:+31967649 None:intergenic
TGATGATTCTGATATAGGAT+CGG 0.610207 6_2:-31965348 Msa0915550:CDS
AAGAGAAGTTGGTGAACATG+TGG 0.611282 6_2:+31967753 None:intergenic
GTGCAAGAGAGATATTTGTT+CGG 0.615616 6_2:+31967865 None:intergenic
GCCTTTGACAACACATCAGG+AGG 0.619924 6_2:-31965522 Msa0915550:CDS
GGTCTGATTCTAAAGGTGAT+GGG 0.621913 6_2:-31967597 Msa0915550:CDS
AAAGCTGCAGAAACTACTGA+TGG 0.625334 6_2:+31964660 None:intergenic
GGCTATTGAATCAGAAATGG+AGG 0.628296 6_2:-31961382 Msa0915550:CDS
AGTTACATGGCTCAATGCTG+GGG 0.628725 6_2:-31959924 Msa0915550:CDS
AGAGAAGTTGGTGAACATGT+GGG 0.631272 6_2:+31967754 None:intergenic
ATATAAATTGGGAAACCATG+AGG 0.631489 6_2:+31959789 None:intergenic
AGGTCAGATAGATACATCCC+GGG 0.632359 6_2:-31965420 Msa0915550:CDS
ATTGAAGCCATGAAGAGAGA+GGG 0.636483 6_2:+31967781 None:intergenic
AGTATATTAAAGATGCTGTG+AGG 0.641668 6_2:+31959537 None:intergenic
CACGTCGTGAATATGCTCGC+TGG 0.643178 6_2:-31962842 Msa0915550:CDS
ATTGAGCCTGATGTTCAACC+TGG 0.648300 6_2:-31962876 Msa0915550:CDS
TATATTAAAGATGCTGTGAG+GGG 0.651668 6_2:+31959539 None:intergenic
AAAGATCAGCTACTAGTGCA+GGG 0.652793 6_2:+31961926 None:intergenic
AATTGAAGCCATGAAGAGAG+AGG 0.654227 6_2:+31967780 None:intergenic
TTATGCACGGAGCAAAGAAG+TGG 0.654806 6_2:+31967646 None:intergenic
ATATTAAAGATGCTGTGAGG+GGG 0.659623 6_2:+31959540 None:intergenic
CTTCGGCTGAAGCCTCCTTG+CGG 0.664983 6_2:+31959945 None:intergenic
ACCAAGAACATACCTTTCAG+GGG 0.665184 6_2:+31962395 None:intergenic
TCTGACGTGATGAGAAAGAG+GGG 0.665582 6_2:+31967699 None:intergenic
GACTGAAACTGTTAGTACTG+TGG 0.666312 6_2:-31964949 Msa0915550:CDS
TGCCTTGGAGAAAGAACGTG+CGG 0.673296 6_2:-31961403 Msa0915550:CDS
GGAGAGACACGGAATCAAAG+TGG 0.674644 6_2:-31959984 Msa0915550:CDS
ACAAGCAAGAGCATTAGAGG+AGG 0.676263 6_2:-31960020 Msa0915550:CDS
GGTGTCTCTATTGAAGGACA+AGG 0.676523 6_2:+31959463 None:intergenic
AGAGATCGTTGGGAGAGACA+CGG 0.678075 6_2:-31959995 Msa0915550:CDS
GGGAGCAGTACTCAACTCAA+GGG 0.682992 6_2:-31959904 Msa0915550:CDS
ACAAAGTCTAATGAGTAACA+AGG 0.685125 6_2:-31961322 Msa0915550:CDS
AAAGAAGTGGTGGAAGACGA+GGG 0.686934 6_2:+31967659 None:intergenic
GAGACACGGAATCAAAGTGG+TGG 0.696553 6_2:-31959981 Msa0915550:CDS
CTGACGTGATGAGAAAGAGG+GGG 0.713118 6_2:+31967700 None:intergenic
ATTTGATGACATCACCCCTG+AGG 0.716657 6_2:-31962617 Msa0915550:CDS
AATAGAGACACCAGACACAG+AGG 0.718828 6_2:-31959452 Msa0915550:three_prime_UTR
GGAATCAAAACCTTTCCTGG+AGG 0.723513 6_2:+31964630 None:intergenic
TGACGAAGACCTCCGCAAGG+AGG 0.731713 6_2:-31959957 Msa0915550:CDS
GAAGTGGTGGAAGACGAGGG+TGG 0.757929 6_2:+31967662 None:intergenic
CGAATGGGTGCAGATCTCAG+AGG 0.766959 6_2:-31959842 Msa0915550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTGTGTTTTTTTAT+TGG - chr6_2:31959612-31959631 Msa0915550:CDS 10.0%
!!! TATTTTTTTTAACTTCTTAA+AGG - chr6_2:31960526-31960545 Msa0915550:intron 10.0%
!!! ACAAAAATTAACTTTAAAAT+AGG - chr6_2:31961018-31961037 Msa0915550:intron 10.0%
!!! CAAAAATTAACTTTAAAATA+GGG - chr6_2:31961019-31961038 Msa0915550:intron 10.0%
!!! ACAATATTTAGTAAATTTTT+GGG + chr6_2:31963035-31963054 None:intergenic 10.0%
!! AAAATAAAAATAAAGCTAAA+TGG + chr6_2:31963198-31963217 None:intergenic 10.0%
!!! TCATTAACTTTATTTAATAA+GGG + chr6_2:31963483-31963502 None:intergenic 10.0%
!!! ATCATTAACTTTATTTAATA+AGG + chr6_2:31963484-31963503 None:intergenic 10.0%
!!! TAATAAATTTTGAGTATTTT+AGG - chr6_2:31963997-31964016 Msa0915550:intron 10.0%
!! CTAAATATATATTAATTGTT+TGG - chr6_2:31966961-31966980 Msa0915550:intron 10.0%
!! TATTAGACAATACAATAATA+AGG + chr6_2:31960496-31960515 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr6_2:31961050-31961069 None:intergenic 15.0%
!!! TATGAGTTTACTTTAAAATA+GGG + chr6_2:31960766-31960785 None:intergenic 15.0%
!!! ATATGAGTTTACTTTAAAAT+AGG + chr6_2:31960767-31960786 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr6_2:31961050-31961069 Msa0915550:intron 15.0%
!!! AAAAAGTTGGTATATTTATA+GGG - chr6_2:31961110-31961129 Msa0915550:intron 15.0%
!!! ATTTGATAATATTGAATCTA+GGG + chr6_2:31961153-31961172 None:intergenic 15.0%
!!! CATTTACTATTATTTTTAAC+AGG - chr6_2:31962550-31962569 Msa0915550:intron 15.0%
!! TTTAAATTCTATTGAAAACT+TGG + chr6_2:31962650-31962669 None:intergenic 15.0%
!!! CACAATATTTAGTAAATTTT+TGG + chr6_2:31963036-31963055 None:intergenic 15.0%
!!! AATTATCTTTTATATAATGG+TGG + chr6_2:31963609-31963628 None:intergenic 15.0%
!! AATATATTTATCGAATCTAA+TGG - chr6_2:31965038-31965057 Msa0915550:CDS 15.0%
!!! TAAAATCATGAAACTTTTAA+AGG - chr6_2:31965872-31965891 Msa0915550:intron 15.0%
!!! TACTTTATTATTTCTCTAAT+TGG + chr6_2:31966363-31966382 None:intergenic 15.0%
!! AATATGAAAAACAAAATAAG+TGG - chr6_2:31966530-31966549 Msa0915550:intron 15.0%
!! AATATGAAAAACAAAATAAG+TGG - chr6_2:31966530-31966549 Msa0915550:intron 15.0%
!!! TATATTTAGAACATTTATTC+TGG + chr6_2:31966950-31966969 None:intergenic 15.0%
!!! CTTCAATTTTGATATAAATT+GGG + chr6_2:31967271-31967290 None:intergenic 15.0%
!! TAATAACATTTGAGTAATAA+CGG + chr6_2:31967762-31967781 None:intergenic 15.0%
!!! TCACTTTTTTAAATTGTTAG+TGG - chr6_2:31959850-31959869 Msa0915550:CDS 20.0%
!!! TTTTTGTTACTCTTGTATAT+TGG - chr6_2:31959903-31959922 Msa0915550:CDS 20.0%
!!! AATTGAACTTGATTTTAACT+TGG - chr6_2:31960610-31960629 Msa0915550:intron 20.0%
!! GTTATTACTATTAGATTCAA+GGG - chr6_2:31960632-31960651 Msa0915550:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG + chr6_2:31960675-31960694 None:intergenic 20.0%
!!! TGAAAAGTTGGTATATTTAT+AGG + chr6_2:31960676-31960695 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr6_2:31961049-31961068 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr6_2:31960739-31960758 Msa0915550:intron 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr6_2:31960739-31960758 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr6_2:31961049-31961068 Msa0915550:intron 20.0%
!!! CAAAAAGTTGGTATATTTAT+AGG - chr6_2:31961109-31961128 Msa0915550:intron 20.0%
!!! GATTTGATAATATTGAATCT+AGG + chr6_2:31961154-31961173 None:intergenic 20.0%
!!! AAAAGTGTTATTAATTAGTG+TGG + chr6_2:31961261-31961280 None:intergenic 20.0%
!!! AAATTGGTTTTCTTTAAGAT+AGG + chr6_2:31961934-31961953 None:intergenic 20.0%
!!! AGAATACTGATTTACTTAAA+TGG + chr6_2:31962247-31962266 None:intergenic 20.0%
!! AAATAAGACCTCTTAAAATT+TGG - chr6_2:31962667-31962686 Msa0915550:CDS 20.0%
!! AATAAGACCTCTTAAAATTT+GGG - chr6_2:31962668-31962687 Msa0915550:CDS 20.0%
!! TGAAAATAGTTTATAAAGAG+TGG + chr6_2:31962941-31962960 None:intergenic 20.0%
!! TTAAACTTGAGCTATATATT+TGG - chr6_2:31963061-31963080 Msa0915550:intron 20.0%
!!! ATTAATTTCAGTTGTTTTCA+AGG + chr6_2:31963171-31963190 None:intergenic 20.0%
!!! ATTTTTATTGAAGGAATAGT+AGG - chr6_2:31963213-31963232 Msa0915550:intron 20.0%
!! AGTTATGAGTTATAGATAAA+AGG - chr6_2:31963305-31963324 Msa0915550:intron 20.0%
!!! GAAGATTGTTTCTTATAAAA+AGG + chr6_2:31963423-31963442 None:intergenic 20.0%
!!! TTATTTAATAAGGGTATACA+TGG + chr6_2:31963474-31963493 None:intergenic 20.0%
!!! TAATCTCCTTATTTAGAATT+AGG + chr6_2:31963805-31963824 None:intergenic 20.0%
!! TTAAATGACATAATTTGAGA+CGG + chr6_2:31963878-31963897 None:intergenic 20.0%
!! ATACTCAAAATTTATTAGAG+TGG + chr6_2:31963994-31964013 None:intergenic 20.0%
!!! TTTTCTACACATGTAATATT+TGG - chr6_2:31964318-31964337 Msa0915550:intron 20.0%
!! ATATTCTTCAGATAACATAA+TGG + chr6_2:31964531-31964550 None:intergenic 20.0%
!! AGAAATTAACATATGAGATA+GGG + chr6_2:31964868-31964887 None:intergenic 20.0%
!!! AATTTTGGTTTGATATATCT+TGG - chr6_2:31965922-31965941 Msa0915550:intron 20.0%
!!! ATTTTGGTTTGATATATCTT+GGG - chr6_2:31965923-31965942 Msa0915550:intron 20.0%
!! CAATATTAATGCTAAAAAAG+TGG - chr6_2:31966205-31966224 Msa0915550:intron 20.0%
!! AAATCGTATATTAAACCTTT+CGG + chr6_2:31966396-31966415 None:intergenic 20.0%
!! CAAGCAATTGTTATATAATA+TGG + chr6_2:31966746-31966765 None:intergenic 20.0%
!!! TATATTAATTGTTTGGAATC+AGG - chr6_2:31966968-31966987 Msa0915550:intron 20.0%
!!! CCTTCAATTTTGATATAAAT+TGG + chr6_2:31967272-31967291 None:intergenic 20.0%
!! CCAATTTATATCAAAATTGA+AGG - chr6_2:31967269-31967288 Msa0915550:intron 20.0%
!! TTATATCAAAATTGAAGGAA+TGG - chr6_2:31967274-31967293 Msa0915550:intron 20.0%
!! TATATCAAAATTGAAGGAAT+GGG - chr6_2:31967275-31967294 Msa0915550:intron 20.0%
! AATTTACCTCTTTGAACATA+TGG + chr6_2:31960395-31960414 None:intergenic 25.0%
! AATAAGGAAAATGCTAATTG+TGG + chr6_2:31960560-31960579 None:intergenic 25.0%
! GGTTATTACTATTAGATTCA+AGG - chr6_2:31960631-31960650 Msa0915550:intron 25.0%
!! TCAAGGGTTAAATATGTTTT+TGG - chr6_2:31960648-31960667 Msa0915550:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr6_2:31961079-31961098 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr6_2:31961078-31961097 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr6_2:31961078-31961097 Msa0915550:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr6_2:31961079-31961098 Msa0915550:intron 25.0%
!! TTCATCATGTTTTGTCAAAT+AGG - chr6_2:31961421-31961440 Msa0915550:CDS 25.0%
!! TCATCATGTTTTGTCAAATA+GGG - chr6_2:31961422-31961441 Msa0915550:CDS 25.0%
! ACAGAAATGTAAAAATGCAA+TGG + chr6_2:31961473-31961492 None:intergenic 25.0%
!! CATTTTTACATTTCTGTGAT+TGG - chr6_2:31961476-31961495 Msa0915550:CDS 25.0%
! ATTTACTTGTCCTGTAATAT+CGG + chr6_2:31961568-31961587 None:intergenic 25.0%
!! ACTATTGATGATTCTGATAT+AGG - chr6_2:31961693-31961712 Msa0915550:CDS 25.0%
! TTGAACAGATATATATTCAG+TGG + chr6_2:31961769-31961788 None:intergenic 25.0%
!!! TAGTGATTTTGATAGCAATT+CGG - chr6_2:31961884-31961903 Msa0915550:intron 25.0%
! TACTTAAATGGTAATTTCCA+GGG + chr6_2:31962235-31962254 None:intergenic 25.0%
! TTACTTAAATGGTAATTTCC+AGG + chr6_2:31962236-31962255 None:intergenic 25.0%
!! AGAACAATCTATCTTTCTTT+TGG - chr6_2:31963136-31963155 Msa0915550:intron 25.0%
!! GAACAATCTATCTTTCTTTT+GGG - chr6_2:31963137-31963156 Msa0915550:intron 25.0%
! TATGAGTTATAGATAAAAGG+AGG - chr6_2:31963308-31963327 Msa0915550:intron 25.0%
!! CTCATTTTGTCTCTTATAAA+AGG + chr6_2:31963379-31963398 None:intergenic 25.0%
! TGGAATTGTCTCTTATAAAA+AGG - chr6_2:31963699-31963718 Msa0915550:intron 25.0%
! AAGAGTCCTAATTCTAAATA+AGG - chr6_2:31963796-31963815 Msa0915550:intron 25.0%
! TTGTTGGAAAATGTTAATAG+AGG + chr6_2:31963915-31963934 None:intergenic 25.0%
! ACTACTTATAATTAAGTGAG+GGG + chr6_2:31963939-31963958 None:intergenic 25.0%
! GACTACTTATAATTAAGTGA+GGG + chr6_2:31963940-31963959 None:intergenic 25.0%
!! TAGCTAATGATTTTATTGAG+AGG - chr6_2:31964052-31964071 Msa0915550:intron 25.0%
! AAAAGACACATAATATGAGA+TGG - chr6_2:31964089-31964108 Msa0915550:intron 25.0%
!! AGTAGTTTATTTCTTCTTTC+TGG - chr6_2:31964258-31964277 Msa0915550:intron 25.0%
!! GCAGTTGTACTTTATATTTT+TGG - chr6_2:31964743-31964762 Msa0915550:CDS 25.0%
! CAGAAATTAACATATGAGAT+AGG + chr6_2:31964869-31964888 None:intergenic 25.0%
! GATCAATGCAATTGAAAAAA+TGG - chr6_2:31965562-31965581 Msa0915550:intron 25.0%
!!! TTTTTCAAAGTTAAGGAATG+AGG - chr6_2:31965688-31965707 Msa0915550:CDS 25.0%
! AAATAGCATATGAAAAAGAG+AGG - chr6_2:31965750-31965769 Msa0915550:CDS 25.0%
!! AAAAGTTTCATGATTTTACC+TGG + chr6_2:31965870-31965889 None:intergenic 25.0%
! CAAAAAAAGAGTTTATACGT+GGG + chr6_2:31965983-31966002 None:intergenic 25.0%
! TTTGATACCATCTTAGAATT+TGG - chr6_2:31966118-31966137 Msa0915550:intron 25.0%
! TTGATACCATCTTAGAATTT+GGG - chr6_2:31966119-31966138 Msa0915550:intron 25.0%
!! AAAGTGGTATCTAGAATTAT+TGG - chr6_2:31966221-31966240 Msa0915550:intron 25.0%
! AACAAAATAAGTGGTAACAA+TGG - chr6_2:31966539-31966558 Msa0915550:intron 25.0%
! GCAATTGTTATATAATATGG+TGG + chr6_2:31966743-31966762 None:intergenic 25.0%
! TTTGGATTAACTGTAAAAGA+AGG - chr6_2:31967393-31967412 Msa0915550:intron 25.0%
! CAAACAATAACAGATTTGAT+AGG - chr6_2:31967827-31967846 Msa0915550:five_prime_UTR 25.0%
! AGTGAAAAAGTGTGGATAAA+TGG + chr6_2:31959230-31959249 None:intergenic 30.0%
! AAGAAGAAGAAGGAATCTTT+TGG - chr6_2:31959523-31959542 Msa0915550:three_prime_UTR 30.0%
ATCATTATGATCCATGATAC+TGG - chr6_2:31959724-31959743 Msa0915550:CDS 30.0%
ACAAGTGTATACATTAGATC+AGG - chr6_2:31959998-31960017 Msa0915550:CDS 30.0%
TTGTCAAATAGCAGTTATAG+TGG + chr6_2:31960166-31960185 None:intergenic 30.0%
TTGTACCAAATAGCTTATTG+TGG - chr6_2:31960190-31960209 Msa0915550:intron 30.0%
TTGTTCCACAATAAGCTATT+TGG + chr6_2:31960198-31960217 None:intergenic 30.0%
AATAGCTTATTGTGGAACAA+CGG - chr6_2:31960198-31960217 Msa0915550:intron 30.0%
AATACAACACTATAGTGTAG+CGG + chr6_2:31960239-31960258 None:intergenic 30.0%
ATGTCAAATAGTAGCTATAG+TGG + chr6_2:31960359-31960378 None:intergenic 30.0%
GCTACTATTTGACATGTATA+TGG - chr6_2:31960364-31960383 Msa0915550:intron 30.0%
GAAAAACCATATGTTCAAAG+AGG - chr6_2:31960386-31960405 Msa0915550:intron 30.0%
AAATGAGTCCTCATAATTTG+AGG - chr6_2:31960419-31960438 Msa0915550:intron 30.0%
AATGAGTCCTCATAATTTGA+GGG - chr6_2:31960420-31960439 Msa0915550:intron 30.0%
!!! CTAATATTTTGGTTAACCCA+TGG + chr6_2:31960449-31960468 None:intergenic 30.0%
! CATGGGTTAACCAAAATATT+AGG - chr6_2:31960447-31960466 Msa0915550:intron 30.0%
! GACTCAAATGCCTAATATTT+TGG + chr6_2:31960460-31960479 None:intergenic 30.0%
TTAACTTCTTAAAGGCAATG+AGG - chr6_2:31960534-31960553 Msa0915550:intron 30.0%
CCTCAGCACTAATAATAATA+AGG + chr6_2:31960576-31960595 None:intergenic 30.0%
CCTTATTATTATTAGTGCTG+AGG - chr6_2:31960573-31960592 Msa0915550:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr6_2:31961065-31961084 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr6_2:31961065-31961084 Msa0915550:intron 30.0%
!!! TTTTGAAGTAGTTTGCTTTC+AGG - chr6_2:31961277-31961296 Msa0915550:CDS 30.0%
! ATTTCGTTTTCCAAGAGATA+AGG + chr6_2:31961359-31961378 None:intergenic 30.0%
TTATCTCTTGGAAAACGAAA+TGG - chr6_2:31961358-31961377 Msa0915550:CDS 30.0%
CAAGAAAATGGTAAATTGGA+AGG - chr6_2:31961606-31961625 Msa0915550:CDS 30.0%
ATAGTCACCTTGAATGTTAT+CGG + chr6_2:31961670-31961689 None:intergenic 30.0%
TGATGATTCTGATATAGGAT+CGG - chr6_2:31961698-31961717 Msa0915550:CDS 30.0%
! TTTCAGTTTGAAGTGGTATT+TGG + chr6_2:31961848-31961867 None:intergenic 30.0%
!! AGAGTATTTTCAGTTTGAAG+TGG + chr6_2:31961855-31961874 None:intergenic 30.0%
!! TTTCTGGTTCAGCATTAAAT+TGG + chr6_2:31961950-31961969 None:intergenic 30.0%
! TCATAATTGGGTATGTTTTC+TGG + chr6_2:31961966-31961985 None:intergenic 30.0%
GAAAACATACCCAATTATGA+TGG - chr6_2:31961966-31961985 Msa0915550:CDS 30.0%
ATTTCTAATCTCACTTGAAC+TGG + chr6_2:31962033-31962052 None:intergenic 30.0%
CATCTTCGCTTAAAATCTTA+GGG + chr6_2:31962154-31962173 None:intergenic 30.0%
TCATCTTCGCTTAAAATCTT+AGG + chr6_2:31962155-31962174 None:intergenic 30.0%
GAAGATGATCAAGACAATAT+TGG - chr6_2:31962167-31962186 Msa0915550:intron 30.0%
TCTAATGATGAATTGGTCAA+TGG + chr6_2:31962272-31962291 None:intergenic 30.0%
CTGATCATCTAATGATGAAT+TGG + chr6_2:31962279-31962298 None:intergenic 30.0%
CAATTCATCATTAGATGATC+AGG - chr6_2:31962277-31962296 Msa0915550:intron 30.0%
ATTTCTGAATCTCCAAATTC+TGG - chr6_2:31962332-31962351 Msa0915550:intron 30.0%
GTGTGTAAATTTCGAAATAC+AGG + chr6_2:31962590-31962609 None:intergenic 30.0%
TGAAAGGAATTTATAAGGAG+TGG + chr6_2:31962741-31962760 None:intergenic 30.0%
ACTCCTTATAAATTCCTTTC+AGG - chr6_2:31962740-31962759 Msa0915550:intron 30.0%
ATGCCTGAAAGGAATTTATA+AGG + chr6_2:31962746-31962765 None:intergenic 30.0%
! AACCTAATCTATTTTCAACG+TGG - chr6_2:31962961-31962980 Msa0915550:intron 30.0%
TACCACGTTGAAAATAGATT+AGG + chr6_2:31962966-31962985 None:intergenic 30.0%
GGTATCATTTGTTCTTATTG+GGG + chr6_2:31962999-31963018 None:intergenic 30.0%
GGGTATCATTTGTTCTTATT+GGG + chr6_2:31963000-31963019 None:intergenic 30.0%
! AGGGTATCATTTGTTCTTAT+TGG + chr6_2:31963001-31963020 None:intergenic 30.0%
ATTGAAGGAATAGTAGGTTT+AGG - chr6_2:31963219-31963238 Msa0915550:intron 30.0%
TTTGTCTCTTATAAAAGGAC+CGG + chr6_2:31963374-31963393 None:intergenic 30.0%
! AATAAGGGTATACATGGTAT+TGG + chr6_2:31963468-31963487 None:intergenic 30.0%
TCCTATGATTAATACTTCAC+CGG + chr6_2:31963576-31963595 None:intergenic 30.0%
ATACAAAAAAGTGATTTCCC+TGG - chr6_2:31963662-31963681 Msa0915550:intron 30.0%
TTGTCTCTTATAAAAAGGAC+TGG - chr6_2:31963704-31963723 Msa0915550:intron 30.0%
AATGTTAATAGAGGTTGTCT+TGG + chr6_2:31963906-31963925 None:intergenic 30.0%
GGACTACTTATAATTAAGTG+AGG + chr6_2:31963941-31963960 None:intergenic 30.0%
!!! AGGCTATAGACACTATTTTT+TGG - chr6_2:31964017-31964036 Msa0915550:intron 30.0%
!! ATGGAGTATTTTTGTTCACT+CGG - chr6_2:31964108-31964127 Msa0915550:intron 30.0%
TTAAAACCTGTTAATTCCTC+AGG - chr6_2:31964145-31964164 Msa0915550:intron 30.0%
GAATGACAAGATGTATACAA+CGG - chr6_2:31964288-31964307 Msa0915550:intron 30.0%
AATGACAAGATGTATACAAC+GGG - chr6_2:31964289-31964308 Msa0915550:intron 30.0%
AGTAGCATTATCTATGTACA+TGG + chr6_2:31964401-31964420 None:intergenic 30.0%
CTTGAATGGAAGAAAAATCA+GGG + chr6_2:31964456-31964475 None:intergenic 30.0%
!! TTTTTAGCAATACAACCACT+TGG - chr6_2:31964499-31964518 Msa0915550:intron 30.0%
! TCTGAAGAATATTGTTTTCC+AGG - chr6_2:31964539-31964558 Msa0915550:intron 30.0%
TGTCTATAAAACCAGAAAGT+CGG + chr6_2:31965075-31965094 None:intergenic 30.0%
AGCAGATTCAAAACAAGTAT+AGG + chr6_2:31965268-31965287 None:intergenic 30.0%
TATTAATGCCAGTTATGAAC+AGG - chr6_2:31965517-31965536 Msa0915550:CDS 30.0%
AATTGAAAAAATGGCTGAAG+AGG - chr6_2:31965571-31965590 Msa0915550:intron 30.0%
!!! TGGAGGTTTTTTCAAAGTTA+AGG - chr6_2:31965681-31965700 Msa0915550:intron 30.0%
ACAAAGTCTAATGAGTAACA+AGG - chr6_2:31965724-31965743 Msa0915550:CDS 30.0%
CCAAAAAAAGAGTTTATACG+TGG + chr6_2:31965984-31966003 None:intergenic 30.0%
!!! CCACGTATAAACTCTTTTTT+TGG - chr6_2:31965981-31966000 Msa0915550:intron 30.0%
CTGAAAATGAGTCTATAAGT+GGG + chr6_2:31966155-31966174 None:intergenic 30.0%
!!! TTATTCACCACTTTTTCCTT+TGG - chr6_2:31966254-31966273 Msa0915550:intron 30.0%
TTAATTCAATCCCAAACCAA+AGG + chr6_2:31966273-31966292 None:intergenic 30.0%
ATATAAATTGGGAAACCATG+AGG + chr6_2:31967260-31967279 None:intergenic 30.0%
!! TTCAGCCTGTAATTTTGTTT+TGG + chr6_2:31967304-31967323 None:intergenic 30.0%
AAATTACAGGCTGAAGAATT+TGG - chr6_2:31967309-31967328 Msa0915550:intron 30.0%
TACAGTTAATCCAAATTCGA+CGG + chr6_2:31967388-31967407 None:intergenic 30.0%
TATATTAAAGATGCTGTGAG+GGG + chr6_2:31967510-31967529 None:intergenic 30.0%
GTATATTAAAGATGCTGTGA+GGG + chr6_2:31967511-31967530 None:intergenic 30.0%
AGTATATTAAAGATGCTGTG+AGG + chr6_2:31967512-31967531 None:intergenic 30.0%
!!! CTATTTTTGAAGCTGTTGAT+TGG - chr6_2:31967530-31967549 Msa0915550:CDS 30.0%
AACTCAGTAAACTACATTTC+TGG + chr6_2:31967556-31967575 None:intergenic 30.0%
TAACTTTCCATAACTGTCTT+TGG - chr6_2:31967635-31967654 Msa0915550:CDS 30.0%
ACTGATAGCAATTGTAATTG+AGG - chr6_2:31967705-31967724 Msa0915550:CDS 30.0%
AGAACAAGAGTGAAAAAGTG+TGG + chr6_2:31959238-31959257 None:intergenic 35.0%
!! TTCTAAAGGTGATGGGTTAT+CGG - chr6_2:31959456-31959475 Msa0915550:three_prime_UTR 35.0%
AGATTCCTTCTTCTTCTTCT+GGG + chr6_2:31959521-31959540 None:intergenic 35.0%
AAGATTCCTTCTTCTTCTTC+TGG + chr6_2:31959522-31959541 None:intergenic 35.0%
! AAGAAGAAGGAATCTTTTGG+AGG - chr6_2:31959526-31959545 Msa0915550:three_prime_UTR 35.0%
! TGAGTTGAAGTTAAGTGCTT+TGG - chr6_2:31959679-31959698 Msa0915550:CDS 35.0%
CAGTTTCATATCCAGTATCA+TGG + chr6_2:31959738-31959757 None:intergenic 35.0%
TCCAAAGAGACGTTTGATAT+AGG - chr6_2:31960044-31960063 Msa0915550:CDS 35.0%
TCCTATATCAAACGTCTCTT+TGG + chr6_2:31960048-31960067 None:intergenic 35.0%
TTGAAAACACTACATACGCA+CGG + chr6_2:31960083-31960102 None:intergenic 35.0%
! GTGTTTTCAATCGCATATCT+CGG - chr6_2:31960093-31960112 Msa0915550:intron 35.0%
TTGTCAAATAGAAGCAACAG+TGG + chr6_2:31960263-31960282 None:intergenic 35.0%
AATACAACACTGTAGTGTAG+CGG + chr6_2:31960335-31960354 None:intergenic 35.0%
ATGGTATCCCTCAAATTATG+AGG + chr6_2:31960430-31960449 None:intergenic 35.0%
TCATAATTTGAGGGATACCA+TGG - chr6_2:31960429-31960448 Msa0915550:intron 35.0%
CATAATTTGAGGGATACCAT+GGG - chr6_2:31960430-31960449 Msa0915550:intron 35.0%
ATAATAAGGCAAATGCTGTG+TGG + chr6_2:31960482-31960501 None:intergenic 35.0%
GAGGGACTAAAATGAAAAGT+TGG + chr6_2:31960688-31960707 None:intergenic 35.0%
GAGGGACTAAAACAAAAAGT+TGG - chr6_2:31961097-31961116 Msa0915550:intron 35.0%
ATTATCAAATCAGCATGACC+TGG - chr6_2:31961163-31961182 Msa0915550:intron 35.0%
TAGTTGAGGATTTGAGAGAA+TGG - chr6_2:31961188-31961207 Msa0915550:intron 35.0%
! ACCTATTTTGCCTTATCTCT+TGG - chr6_2:31961346-31961365 Msa0915550:CDS 35.0%
TCCAAGAGATAAGGCAAAAT+AGG + chr6_2:31961350-31961369 None:intergenic 35.0%
AGTAAATGCTGAGAACAAGT+TGG - chr6_2:31961581-31961600 Msa0915550:CDS 35.0%
! AACAAGTTGGAGCAAGAAAA+TGG - chr6_2:31961594-31961613 Msa0915550:CDS 35.0%
GGAGCAAGAAAATGGTAAAT+TGG - chr6_2:31961602-31961621 Msa0915550:CDS 35.0%
!!! AGTGGTATTTGGTTTTCACT+GGG + chr6_2:31961837-31961856 None:intergenic 35.0%
!!! AAGTGGTATTTGGTTTTCAC+TGG + chr6_2:31961838-31961857 None:intergenic 35.0%
! ACTGGCTTACCATCATAATT+GGG + chr6_2:31961978-31961997 None:intergenic 35.0%
!! TACTGGCTTACCATCATAAT+TGG + chr6_2:31961979-31961998 None:intergenic 35.0%
TGCTCATTATTAAGGTCTAC+TGG + chr6_2:31961996-31962015 None:intergenic 35.0%
GATATTTCCAAAACCTCATC+TGG - chr6_2:31962056-31962075 Msa0915550:intron 35.0%
!! GAAATTGTGTTGTTTGACTC+AGG + chr6_2:31962128-31962147 None:intergenic 35.0%
!!! AGACCTGTTGAGTTTTGTTA+AGG + chr6_2:31962193-31962212 None:intergenic 35.0%
! AACTCAACAGGTCTTATATG+AGG - chr6_2:31962199-31962218 Msa0915550:intron 35.0%
!! AGCTGCATTGCAAGTTTTAA+AGG - chr6_2:31962472-31962491 Msa0915550:CDS 35.0%
! GGCATAACCCAAATTTTAAG+AGG + chr6_2:31962678-31962697 None:intergenic 35.0%
! CTTTACAAGCCTGTTTTGTA+GGG + chr6_2:31962709-31962728 None:intergenic 35.0%
CTACAAAACAGGCTTGTAAA+GGG - chr6_2:31962708-31962727 Msa0915550:intron 35.0%
GAAAAGAGATAATGCCTGAA+AGG + chr6_2:31962757-31962776 None:intergenic 35.0%
ACTCAATACAGAGATGGTAT+CGG + chr6_2:31962877-31962896 None:intergenic 35.0%
AGTTAGACTCAATACAGAGA+TGG + chr6_2:31962883-31962902 None:intergenic 35.0%
!! CCTGAAAAGCTGATTTTGTA+AGG + chr6_2:31962909-31962928 None:intergenic 35.0%
! CCTTACAAAATCAGCTTTTC+AGG - chr6_2:31962906-31962925 Msa0915550:intron 35.0%
! TCTATTTTCAACGTGGTACT+TGG - chr6_2:31962968-31962987 Msa0915550:intron 35.0%
!! TTTTTGGGCAGTTTCTATGA+GGG + chr6_2:31963020-31963039 None:intergenic 35.0%
!! ATTTTTGGGCAGTTTCTATG+AGG + chr6_2:31963021-31963040 None:intergenic 35.0%
TAAGCCATGCTCTATCTTAT+TGG - chr6_2:31963102-31963121 Msa0915550:intron 35.0%
ATCACCAATAAGATAGAGCA+TGG + chr6_2:31963109-31963128 None:intergenic 35.0%
TTCAACACATGCACATCTTT+CGG + chr6_2:31963286-31963305 None:intergenic 35.0%
CAAGGAGATGTATATATCCA+AGG + chr6_2:31963537-31963556 None:intergenic 35.0%
! ACCGGTGAAGTATTAATCAT+AGG - chr6_2:31963572-31963591 Msa0915550:intron 35.0%
GACAATTCCAGAAATTCACA+TGG + chr6_2:31963689-31963708 None:intergenic 35.0%
TCTCTTATAAAAAGGACTGG+AGG - chr6_2:31963707-31963726 Msa0915550:intron 35.0%
CTCTTATAAAAAGGACTGGA+GGG - chr6_2:31963708-31963727 Msa0915550:intron 35.0%
TTGAATATCCCTACAAACAG+TGG + chr6_2:31963771-31963790 None:intergenic 35.0%
TAATTAAGTGAGGGGATTGT+TGG + chr6_2:31963931-31963950 None:intergenic 35.0%
TTAGTAGCAGTGTAGTAGTT+AGG + chr6_2:31963965-31963984 None:intergenic 35.0%
!!! TGCATTTGTGGTTACTTTTC+AGG - chr6_2:31964350-31964369 Msa0915550:intron 35.0%
CCTTGAATGGAAGAAAAATC+AGG + chr6_2:31964457-31964476 None:intergenic 35.0%
! CCTGATTTTTCTTCCATTCA+AGG - chr6_2:31964454-31964473 Msa0915550:intron 35.0%
! AGAATATTGTTTTCCAGGCT+TGG - chr6_2:31964544-31964563 Msa0915550:intron 35.0%
TTTCAGGGGAGAAGTAAAAA+GGG + chr6_2:31964640-31964659 None:intergenic 35.0%
ATTCATCAGTTCAATGCAGA+TGG + chr6_2:31965021-31965040 None:intergenic 35.0%
TAGTAGCTGATCTTTCTTCT+GGG - chr6_2:31965128-31965147 Msa0915550:CDS 35.0%
GGAATAATTGCTCTTGCATT+TGG - chr6_2:31965157-31965176 Msa0915550:CDS 35.0%
AAAGTTAAGGAATGAGGTTC+AGG - chr6_2:31965694-31965713 Msa0915550:CDS 35.0%
CTCTAGATCATACTGTAAAC+GGG + chr6_2:31965822-31965841 None:intergenic 35.0%
CCTCTAGATCATACTGTAAA+CGG + chr6_2:31965823-31965842 None:intergenic 35.0%
! GTCTCATCAACTCTCAATTT+TGG - chr6_2:31965907-31965926 Msa0915550:intron 35.0%
TGGTTTGATATATCTTGGGT+TGG - chr6_2:31965927-31965946 Msa0915550:intron 35.0%
AAAAAGAGTTTATACGTGGG+AGG + chr6_2:31965980-31965999 None:intergenic 35.0%
GTGTGTTAAAAGTCTCACAT+TGG + chr6_2:31966018-31966037 None:intergenic 35.0%
AAAGCCTATCCAAGATCTAT+TGG + chr6_2:31966101-31966120 None:intergenic 35.0%
! ATCTCACCCAAATTCTAAGA+TGG + chr6_2:31966128-31966147 None:intergenic 35.0%
CCTGAAAATGAGTCTATAAG+TGG + chr6_2:31966156-31966175 None:intergenic 35.0%
! CCACTTATAGACTCATTTTC+AGG - chr6_2:31966153-31966172 Msa0915550:intron 35.0%
AGGCCATATCTAATTCAATG+TGG - chr6_2:31966173-31966192 Msa0915550:intron 35.0%
GGCCATATCTAATTCAATGT+GGG - chr6_2:31966174-31966193 Msa0915550:intron 35.0%
GACCCACATTGAATTAGATA+TGG + chr6_2:31966179-31966198 None:intergenic 35.0%
!!! ACCACTTTTTCCTTTGGTTT+GGG - chr6_2:31966260-31966279 Msa0915550:intron 35.0%
TATTCCATACCATCCAATCA+AGG - chr6_2:31966298-31966317 Msa0915550:intron 35.0%
AAGTAACACTGAAATCCGAA+AGG - chr6_2:31966378-31966397 Msa0915550:intron 35.0%
! GTTGTTATTGCGATATGCTT+CGG - chr6_2:31966467-31966486 Msa0915550:intron 35.0%
! GTTGTTATTGCGATATGCTT+CGG - chr6_2:31966467-31966486 Msa0915550:intron 35.0%
GCAAGAGATAAACACATACA+TGG + chr6_2:31966701-31966720 None:intergenic 35.0%
ATCAGTGCACAAATTCAAGT+AGG + chr6_2:31966802-31966821 None:intergenic 35.0%
! TGAATTTGTGCACTGATGTT+CGG - chr6_2:31966805-31966824 Msa0915550:intron 35.0%
! AATTGTTTGGAATCAGGACT+TGG - chr6_2:31966974-31966993 Msa0915550:intron 35.0%
! ATTGTTTGGAATCAGGACTT+GGG - chr6_2:31966975-31966994 Msa0915550:intron 35.0%
AATTGACAAGATCATCCTCA+TGG - chr6_2:31967242-31967261 Msa0915550:intron 35.0%
!!! AGCCTGTAATTTTGTTTTGG+AGG + chr6_2:31967301-31967320 None:intergenic 35.0%
! GAACTTATGAGCGAACTTTT+GGG + chr6_2:31967466-31967485 None:intergenic 35.0%
! TGAACTTATGAGCGAACTTT+TGG + chr6_2:31967467-31967486 None:intergenic 35.0%
ATATTAAAGATGCTGTGAGG+GGG + chr6_2:31967509-31967528 None:intergenic 35.0%
TGATCATCCAAAGACAGTTA+TGG + chr6_2:31967645-31967664 None:intergenic 35.0%
ATTGAAGCCATGAAGAGAGA+GGG + chr6_2:31959268-31959287 None:intergenic 40.0%
AATTGAAGCCATGAAGAGAG+AGG + chr6_2:31959269-31959288 None:intergenic 40.0%
!! AGAGAAGTTGGTGAACATGT+GGG + chr6_2:31959295-31959314 None:intergenic 40.0%
!! AAGAGAAGTTGGTGAACATG+TGG + chr6_2:31959296-31959315 None:intergenic 40.0%
AATCGGAGTTGAAGAGAAGT+TGG + chr6_2:31959307-31959326 None:intergenic 40.0%
! GGTCTGATTCTAAAGGTGAT+GGG - chr6_2:31959449-31959468 Msa0915550:three_prime_UTR 40.0%
!! TCTAAAGGTGATGGGTTATC+GGG - chr6_2:31959457-31959476 Msa0915550:three_prime_UTR 40.0%
TGATTCCCAGAAGAAGAAGA+AGG - chr6_2:31959513-31959532 Msa0915550:three_prime_UTR 40.0%
!! ATCTTTTGGAGGTGTGTGTA+TGG - chr6_2:31959537-31959556 Msa0915550:three_prime_UTR 40.0%
ACAGCTGCAATATGAAGTGA+TGG - chr6_2:31959956-31959975 Msa0915550:CDS 40.0%
CAGCTGCAATATGAAGTGAT+GGG - chr6_2:31959957-31959976 Msa0915550:CDS 40.0%
!! ATGAAGTGATGGGTCTACAT+AGG - chr6_2:31959967-31959986 Msa0915550:CDS 40.0%
TGAAAACACTACATACGCAC+GGG + chr6_2:31960082-31960101 None:intergenic 40.0%
!! TAGTTTGCTTTCAGGAGTTG+TGG - chr6_2:31961285-31961304 Msa0915550:CDS 40.0%
! AGTTTGCTTTCAGGAGTTGT+GGG - chr6_2:31961286-31961305 Msa0915550:CDS 40.0%
TAAGGCAAAATAGGTAAGCC+CGG + chr6_2:31961341-31961360 None:intergenic 40.0%
TTCCAGTAAGTAATCCTAGC+TGG - chr6_2:31961381-31961400 Msa0915550:CDS 40.0%
TCTGTGATTGGATACAGAAG+AGG - chr6_2:31961488-31961507 Msa0915550:CDS 40.0%
TCTTCTGATGCCGATATTAC+AGG - chr6_2:31961555-31961574 Msa0915550:CDS 40.0%
AAGGTCAGATAGATACATCC+CGG - chr6_2:31961625-31961644 Msa0915550:CDS 40.0%
ACTCAGGAGATGAATAATCC+CGG + chr6_2:31961647-31961666 None:intergenic 40.0%
TTCTGATATAGGATCGGAGT+TGG - chr6_2:31961704-31961723 Msa0915550:CDS 40.0%
GATAGCAAAAACACCTCCAA+TGG - chr6_2:31961732-31961751 Msa0915550:intron 40.0%
AGTGGCATCATTGATACCAT+TGG + chr6_2:31961751-31961770 None:intergenic 40.0%
AGACCTTAATAATGAGCAGC+AGG - chr6_2:31961998-31962017 Msa0915550:intron 40.0%
CATCCTGCTGCTCATTATTA+AGG + chr6_2:31962004-31962023 None:intergenic 40.0%
! TCCAAAACCTCATCTGGTTT+AGG - chr6_2:31962062-31962081 Msa0915550:intron 40.0%
! ACCTAAACCAGATGAGGTTT+TGG + chr6_2:31962066-31962085 None:intergenic 40.0%
GACTGAAACTGTTAGTACTG+TGG - chr6_2:31962097-31962116 Msa0915550:intron 40.0%
! TGGCCTTAACAAAACTCAAC+AGG - chr6_2:31962187-31962206 Msa0915550:intron 40.0%
GAGAAAAGGGATCCAGAATT+TGG + chr6_2:31962347-31962366 None:intergenic 40.0%
AAAGCTGCAGAAACTACTGA+TGG + chr6_2:31962389-31962408 None:intergenic 40.0%
AGTAGTTTCTGCAGCTTTAC+AGG - chr6_2:31962391-31962410 Msa0915550:intron 40.0%
! CTGTTTTGTAGGGTTGAGTT+TGG + chr6_2:31962699-31962718 None:intergenic 40.0%
CAAACTCAACCCTACAAAAC+AGG - chr6_2:31962697-31962716 Msa0915550:intron 40.0%
! CCTTTACAAGCCTGTTTTGT+AGG + chr6_2:31962710-31962729 None:intergenic 40.0%
CCTACAAAACAGGCTTGTAA+AGG - chr6_2:31962707-31962726 Msa0915550:intron 40.0%
AAAACAGGCTTGTAAAGGGA+AGG - chr6_2:31962712-31962731 Msa0915550:intron 40.0%
AAACAGGCTTGTAAAGGGAA+GGG - chr6_2:31962713-31962732 Msa0915550:intron 40.0%
TTCTCACGTCCAACACTATT+GGG - chr6_2:31962807-31962826 Msa0915550:intron 40.0%
GGCTTAGTAACACAACACAA+TGG + chr6_2:31963088-31963107 None:intergenic 40.0%
!! CTCTATCTTATTGGTGATGC+TGG - chr6_2:31963111-31963130 Msa0915550:intron 40.0%
ATGTTATTGAGTACTCCCTC+CGG - chr6_2:31963352-31963371 Msa0915550:intron 40.0%
TCTCTTATAAAAGGACCGGA+GGG + chr6_2:31963370-31963389 None:intergenic 40.0%
! TATATCCAAGGCACTTGCAT+TGG + chr6_2:31963525-31963544 None:intergenic 40.0%
ACATCTCCTTGCACGTTAAT+TGG - chr6_2:31963546-31963565 Msa0915550:intron 40.0%
! TTGCACGTTAATTGGCTTAC+CGG - chr6_2:31963554-31963573 Msa0915550:intron 40.0%
AACGACTAACCACTGTTTGT+AGG - chr6_2:31963759-31963778 Msa0915550:intron 40.0%
ACGACTAACCACTGTTTGTA+GGG - chr6_2:31963760-31963779 Msa0915550:intron 40.0%
CAATGACCTGAGGAATTAAC+AGG + chr6_2:31964154-31964173 None:intergenic 40.0%
! AAATCACCAGGTTGAACATC+AGG + chr6_2:31964179-31964198 None:intergenic 40.0%
!!! GTGGTTACTTTTCAGGAATG+CGG - chr6_2:31964357-31964376 Msa0915550:intron 40.0%
GCATTATCTATGTACATGGC+AGG + chr6_2:31964397-31964416 None:intergenic 40.0%
AAGAAAAATCAGGGTCCTCA+GGG + chr6_2:31964447-31964466 None:intergenic 40.0%
! TGTCAAGTTCTGACCTTGAA+TGG + chr6_2:31964470-31964489 None:intergenic 40.0%
ACATAATGGCATAGACCAAG+TGG + chr6_2:31964517-31964536 None:intergenic 40.0%
AAGCTGGACTTATTGAAAGC+AGG - chr6_2:31964570-31964589 Msa0915550:intron 40.0%
CTTTCAGGGGAGAAGTAAAA+AGG + chr6_2:31964641-31964660 None:intergenic 40.0%
! CTTTTTACTTCTCCCCTGAA+AGG - chr6_2:31964639-31964658 Msa0915550:CDS 40.0%
ACCAAGAACATACCTTTCAG+GGG + chr6_2:31964654-31964673 None:intergenic 40.0%
CACCAAGAACATACCTTTCA+GGG + chr6_2:31964655-31964674 None:intergenic 40.0%
TCACCAAGAACATACCTTTC+AGG + chr6_2:31964656-31964675 None:intergenic 40.0%
! AGGAAGCTGTCTTTTCTCTA+GGG + chr6_2:31964933-31964952 None:intergenic 40.0%
CAATGCAGATGGAATCAAGA+TGG + chr6_2:31965010-31965029 None:intergenic 40.0%
AAAGATCAGCTACTAGTGCA+GGG + chr6_2:31965123-31965142 None:intergenic 40.0%
CTAGTAGCTGATCTTTCTTC+TGG - chr6_2:31965127-31965146 Msa0915550:CDS 40.0%
AGTAGCTGATCTTTCTTCTG+GGG - chr6_2:31965129-31965148 Msa0915550:CDS 40.0%
TTGTCACAGGTTTATCTGGT+TGG + chr6_2:31965358-31965377 None:intergenic 40.0%
! GCTTTTGTCACAGGTTTATC+TGG + chr6_2:31965362-31965381 None:intergenic 40.0%
CAAAAGCTCCTGTTCATAAC+TGG + chr6_2:31965528-31965547 None:intergenic 40.0%
! AACAGGAGCTTTTGTTAGAG+AGG - chr6_2:31965534-31965553 Msa0915550:CDS 40.0%
! ACAGGAGCTTTTGTTAGAGA+GGG - chr6_2:31965535-31965554 Msa0915550:CDS 40.0%
TGAAGAGGCAAAACATGAGT+TGG - chr6_2:31965586-31965605 Msa0915550:intron 40.0%
TGCGGCTATTGAATCAGAAA+TGG - chr6_2:31965661-31965680 Msa0915550:intron 40.0%
GGCTATTGAATCAGAAATGG+AGG - chr6_2:31965664-31965683 Msa0915550:intron 40.0%
AAGAGAGGATCAAGAAGCTT+CGG - chr6_2:31965765-31965784 Msa0915550:intron 40.0%
CCGTTTACAGTATGATCTAG+AGG - chr6_2:31965820-31965839 Msa0915550:intron 40.0%
! TTCATGATTTTACCTGGCCA+TGG + chr6_2:31965864-31965883 None:intergenic 40.0%
!!! CACCACTTTTTCCTTTGGTT+TGG - chr6_2:31966259-31966278 Msa0915550:intron 40.0%
TCCCAAACCAAAGGAAAAAG+TGG + chr6_2:31966264-31966283 None:intergenic 40.0%
ACAACCATAGTAGCAGACAT+GGG + chr6_2:31966452-31966471 None:intergenic 40.0%
AACAACCATAGTAGCAGACA+TGG + chr6_2:31966453-31966472 None:intergenic 40.0%
TGGCTGCAAAACAAATATGC+AGG + chr6_2:31966723-31966742 None:intergenic 40.0%
!! AGAACAAGCAAGAGCATTAG+AGG - chr6_2:31967023-31967042 Msa0915550:intron 40.0%
! AGCATTGAGCCATGTAACTT+CGG + chr6_2:31967121-31967140 None:intergenic 40.0%
AAGTTACATGGCTCAATGCT+GGG - chr6_2:31967121-31967140 Msa0915550:intron 40.0%
ATTGGAGAAGCTCAAACGAA+TGG - chr6_2:31967188-31967207 Msa0915550:intron 40.0%
TTGGAGAAGCTCAAACGAAT+GGG - chr6_2:31967189-31967208 Msa0915550:intron 40.0%
GGCCTCCAAAACAAAATTAC+AGG - chr6_2:31967296-31967315 Msa0915550:intron 40.0%
GGCAAATGTTGAATTACAGC+AGG + chr6_2:31967741-31967760 None:intergenic 40.0%
!! TGACAGGAGAAAGTACTTCA+AGG + chr6_2:31967863-31967882 None:intergenic 40.0%
TCTTCTTCCCTCTCTCTTCA+TGG - chr6_2:31959258-31959277 Msa0915550:three_prime_UTR 45.0%
TCTGACGTGATGAGAAAGAG+GGG + chr6_2:31959350-31959369 None:intergenic 45.0%
GTCTGACGTGATGAGAAAGA+GGG + chr6_2:31959351-31959370 None:intergenic 45.0%
AGTCTGACGTGATGAGAAAG+AGG + chr6_2:31959352-31959371 None:intergenic 45.0%
! AAAGAAGTGGTGGAAGACGA+GGG + chr6_2:31959390-31959409 None:intergenic 45.0%
TTATGCACGGAGCAAAGAAG+TGG + chr6_2:31959403-31959422 None:intergenic 45.0%
! GGGTCTGATTCTAAAGGTGA+TGG - chr6_2:31959448-31959467 Msa0915550:three_prime_UTR 45.0%
GTGAGCGTAATCACATGTGT+TGG + chr6_2:31959825-31959844 None:intergenic 45.0%
ACGTGTGTTCGTGTTGTGTT+TGG - chr6_2:31959878-31959897 Msa0915550:CDS 45.0%
TCGCATATCTCGGAAGAAAG+AGG - chr6_2:31960103-31960122 Msa0915550:intron 45.0%
AGCTTATTGTGGAACAACGG+CGG - chr6_2:31960201-31960220 Msa0915550:intron 45.0%
CTCAAATCCTCAACTATGCC+AGG + chr6_2:31961184-31961203 None:intergenic 45.0%
! GCTGGAGTCCTTCTTTTTAC+CGG - chr6_2:31961319-31961338 Msa0915550:CDS 45.0%
! CTGGAGTCCTTCTTTTTACC+GGG - chr6_2:31961320-31961339 Msa0915550:CDS 45.0%
AGGTAAGCCCGGTAAAAAGA+AGG + chr6_2:31961330-31961349 None:intergenic 45.0%
AGCCAGCTAGGATTACTTAC+TGG + chr6_2:31961386-31961405 None:intergenic 45.0%
GAAGCCTTTGACAACACATC+AGG - chr6_2:31961521-31961540 Msa0915550:CDS 45.0%
ACCTCCTGATGTGTTGTCAA+AGG + chr6_2:31961528-31961547 None:intergenic 45.0%
AGGTCAGATAGATACATCCC+GGG - chr6_2:31961626-31961645 Msa0915550:CDS 45.0%
CTCAGGAGATGAATAATCCC+GGG + chr6_2:31961646-31961665 None:intergenic 45.0%
CCTTGAATGTTATCGGACTC+AGG + chr6_2:31961663-31961682 None:intergenic 45.0%
CCTGAGTCCGATAACATTCA+AGG - chr6_2:31961660-31961679 Msa0915550:CDS 45.0%
GGCATCATTGATACCATTGG+AGG + chr6_2:31961748-31961767 None:intergenic 45.0%
! ACTTGTTGCATGAGTCAGCT+CGG - chr6_2:31961793-31961812 Msa0915550:intron 45.0%
ATCAGCACCTAAACCAGATG+AGG + chr6_2:31962072-31962091 None:intergenic 45.0%
! TATGAGGAACAGAGTATCCC+TGG - chr6_2:31962215-31962234 Msa0915550:intron 45.0%
AATGCCAGGAGCAGAGAAAA+GGG + chr6_2:31962360-31962379 None:intergenic 45.0%
GGAATCAAAACCTTTCCTGG+AGG + chr6_2:31962419-31962438 None:intergenic 45.0%
GCAGGAATCAAAACCTTTCC+TGG + chr6_2:31962422-31962441 None:intergenic 45.0%
! GATTCCTGCAGCTTTTGATC+AGG - chr6_2:31962433-31962452 Msa0915550:CDS 45.0%
TGAACCTGATCAAAAGCTGC+AGG + chr6_2:31962440-31962459 None:intergenic 45.0%
! TGCAGCTTTTGATCAGGTTC+AGG - chr6_2:31962439-31962458 Msa0915550:CDS 45.0%
! GCAGCTTTTGATCAGGTTCA+GGG - chr6_2:31962440-31962459 Msa0915550:CDS 45.0%
! TGGACGTGAGAAGGTGTATT+GGG + chr6_2:31962799-31962818 None:intergenic 45.0%
! TTGGACGTGAGAAGGTGTAT+TGG + chr6_2:31962800-31962819 None:intergenic 45.0%
! CAATAGTGTTGGACGTGAGA+AGG + chr6_2:31962808-31962827 None:intergenic 45.0%
CTTCTCACGTCCAACACTAT+TGG - chr6_2:31962806-31962825 Msa0915550:intron 45.0%
TGCGTGGATAATATGGCAAG+TGG - chr6_2:31962835-31962854 Msa0915550:CDS 45.0%
GTCTCTTATAAAAGGACCGG+AGG + chr6_2:31963371-31963390 None:intergenic 45.0%
! AAGGCACTTGCATTGGAAGT+TGG + chr6_2:31963518-31963537 None:intergenic 45.0%
AACTTCCAATGCAAGTGCCT+TGG - chr6_2:31963517-31963536 Msa0915550:intron 45.0%
GGTAAGCCAATTAACGTGCA+AGG + chr6_2:31963555-31963574 None:intergenic 45.0%
CCAGAAATTCACATGGACCA+GGG + chr6_2:31963682-31963701 None:intergenic 45.0%
TCCAGAAATTCACATGGACC+AGG + chr6_2:31963683-31963702 None:intergenic 45.0%
GTAGCAGTGTAGTAGTTAGG+CGG + chr6_2:31963962-31963981 None:intergenic 45.0%
ATTGAGCCTGATGTTCAACC+TGG - chr6_2:31964170-31964189 Msa0915550:intron 45.0%
TGGCATTACACGTGCATTTG+TGG - chr6_2:31964338-31964357 Msa0915550:intron 45.0%
! ATTTGATGACATCACCCCTG+AGG - chr6_2:31964429-31964448 Msa0915550:intron 45.0%
AGAAAAATCAGGGTCCTCAG+GGG + chr6_2:31964446-31964465 None:intergenic 45.0%
GAAGAAAAATCAGGGTCCTC+AGG + chr6_2:31964448-31964467 None:intergenic 45.0%
! TCCCCTGAAAGGTATGTTCT+TGG - chr6_2:31964650-31964669 Msa0915550:CDS 45.0%
! TTTTCCAGCTGACAAGATCC+TGG + chr6_2:31964907-31964926 None:intergenic 45.0%
GGATCTTGTCAGCTGGAAAA+TGG - chr6_2:31964907-31964926 Msa0915550:CDS 45.0%
! CAGGAAGCTGTCTTTTCTCT+AGG + chr6_2:31964934-31964953 None:intergenic 45.0%
GAAAGATCAGCTACTAGTGC+AGG + chr6_2:31965124-31965143 None:intergenic 45.0%
!! GACTTGTTCATTTTTCCCCC+TGG - chr6_2:31965295-31965314 Msa0915550:CDS 45.0%
!! TGTTCATTTTTCCCCCTGGA+TGG - chr6_2:31965299-31965318 Msa0915550:CDS 45.0%
!! GTTCATTTTTCCCCCTGGAT+GGG - chr6_2:31965300-31965319 Msa0915550:CDS 45.0%
!! TTCATTTTTCCCCCTGGATG+GGG - chr6_2:31965301-31965320 Msa0915550:CDS 45.0%
!! AGAAGCATCTCCAGTAGCAA+GGG + chr6_2:31965399-31965418 None:intergenic 45.0%
AGAAGAAGACAGTGTTGCCT+TGG - chr6_2:31965628-31965647 Msa0915550:intron 45.0%
AGAGAGGATCAAGAAGCTTC+GGG - chr6_2:31965766-31965785 Msa0915550:intron 45.0%
! TGAACGAAAAGCCTTGTCCA+TGG - chr6_2:31965844-31965863 Msa0915550:intron 45.0%
! ATTTTACCTGGCCATGGACA+AGG + chr6_2:31965858-31965877 None:intergenic 45.0%
GTCTCACATTGGATGCGATA+AGG + chr6_2:31966007-31966026 None:intergenic 45.0%
AACTCCAGATGTCCAGTCTT+GGG + chr6_2:31966051-31966070 None:intergenic 45.0%
AAACTCCAGATGTCCAGTCT+TGG + chr6_2:31966052-31966071 None:intergenic 45.0%
TCTATTGGCCACACACTATC+AGG + chr6_2:31966086-31966105 None:intergenic 45.0%
AGTGTGTGGCCAATAGATCT+TGG - chr6_2:31966089-31966108 Msa0915550:intron 45.0%
GTGGCCAATAGATCTTGGAT+AGG - chr6_2:31966094-31966113 Msa0915550:intron 45.0%
CACACCTTGATTGGATGGTA+TGG + chr6_2:31966305-31966324 None:intergenic 45.0%
TACCATCCAATCAAGGTGTG+AGG - chr6_2:31966305-31966324 Msa0915550:intron 45.0%
ACCATCCAATCAAGGTGTGA+GGG - chr6_2:31966306-31966325 Msa0915550:intron 45.0%
GGGAGGTGATAGTAGTACTA+AGG - chr6_2:31966326-31966345 Msa0915550:intron 45.0%
TGCTTGTTCTCTCACTCGTT+TGG + chr6_2:31967013-31967032 None:intergenic 45.0%
!! ACAAGCAAGAGCATTAGAGG+AGG - chr6_2:31967026-31967045 Msa0915550:intron 45.0%
GAAGTTACATGGCTCAATGC+TGG - chr6_2:31967120-31967139 Msa0915550:intron 45.0%
AGTTACATGGCTCAATGCTG+GGG - chr6_2:31967122-31967141 Msa0915550:intron 45.0%
AACTCAAGGGTCAGTTGACA+GGG - chr6_2:31967155-31967174 Msa0915550:intron 45.0%
TGACAGGGCTGAAAGCTTAT+TGG - chr6_2:31967170-31967189 Msa0915550:intron 45.0%
GGTGTCTCTATTGAAGGACA+AGG + chr6_2:31967586-31967605 None:intergenic 45.0%
GTGTCTGGTGTCTCTATTGA+AGG + chr6_2:31967592-31967611 None:intergenic 45.0%
AATAGAGACACCAGACACAG+AGG - chr6_2:31967594-31967613 Msa0915550:CDS 45.0%
!!! AAAAAATTCTAAATTTTTTT+GGG + chr6_2:31960852-31960871 None:intergenic 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG + chr6_2:31960853-31960872 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG - chr6_2:31960891-31960910 Msa0915550:intron 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG - chr6_2:31960944-31960963 Msa0915550:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+GGG - chr6_2:31960945-31960964 Msa0915550:intron 5.0%
!!! TTTATTTTTATTTTTATTGA+AGG - chr6_2:31963204-31963223 Msa0915550:intron 5.0%
!!! AAAAATTATCTTTTATATAA+TGG + chr6_2:31963612-31963631 None:intergenic 5.0%
TGGTGGGGTTGAAGGCTAAT+CGG + chr6_2:31959324-31959343 None:intergenic 50.0%
! TGAGAAAGAGGGGGTTTGGT+GGG + chr6_2:31959340-31959359 None:intergenic 50.0%
ATGAGAAAGAGGGGGTTTGG+TGG + chr6_2:31959341-31959360 None:intergenic 50.0%
GTGATGAGAAAGAGGGGGTT+TGG + chr6_2:31959344-31959363 None:intergenic 50.0%
CTGACGTGATGAGAAAGAGG+GGG + chr6_2:31959349-31959368 None:intergenic 50.0%
! CAAAGAAGTGGTGGAAGACG+AGG + chr6_2:31959391-31959410 None:intergenic 50.0%
TGGGTCGGGTCTGATTCTAA+AGG - chr6_2:31959442-31959461 Msa0915550:three_prime_UTR 50.0%
!! AAGGTGATGGGTTATCGGGT+TGG - chr6_2:31959461-31959480 Msa0915550:three_prime_UTR 50.0%
GTTGGTCCGATTCAGCAACT+GGG - chr6_2:31959479-31959498 Msa0915550:three_prime_UTR 50.0%
CAGTGACCCAGTTGCTGAAT+CGG + chr6_2:31959488-31959507 None:intergenic 50.0%
ATTGTGGAACAACGGCGGTT+TGG - chr6_2:31960206-31960225 Msa0915550:intron 50.0%
AGCATGACCTGGCATAGTTG+AGG - chr6_2:31961174-31961193 Msa0915550:intron 50.0%
CTTTCAGGAGTTGTGGGAGT+AGG - chr6_2:31961292-31961311 Msa0915550:CDS 50.0%
GCCTTTGACAACACATCAGG+AGG - chr6_2:31961524-31961543 Msa0915550:CDS 50.0%
CTTGTTGCATGAGTCAGCTC+GGG - chr6_2:31961794-31961813 Msa0915550:intron 50.0%
GAATGCCAGGAGCAGAGAAA+AGG + chr6_2:31962361-31962380 None:intergenic 50.0%
GCAGAAACTACTGATGGAGC+AGG + chr6_2:31962383-31962402 None:intergenic 50.0%
TTTACAGGTGCCTCCAGGAA+AGG - chr6_2:31962406-31962425 Msa0915550:intron 50.0%
GGCTGGATGCGTGGATAATA+TGG - chr6_2:31962828-31962847 Msa0915550:CDS 50.0%
! GGTATCGGAGTCCATTGATG+CGG + chr6_2:31962862-31962881 None:intergenic 50.0%
CCCTGGTCCATGTGAATTTC+TGG - chr6_2:31963679-31963698 Msa0915550:intron 50.0%
ACATCAGGCTCAATGACCTG+AGG + chr6_2:31964164-31964183 None:intergenic 50.0%
CGACGTGTGCATAAATCACC+AGG + chr6_2:31964191-31964210 None:intergenic 50.0%
TCGTGAATATGCTCGCTGGT+TGG - chr6_2:31964208-31964227 Msa0915550:intron 50.0%
GAAGACTGCACTGCTACTGA+GGG + chr6_2:31964713-31964732 None:intergenic 50.0%
TGAAGACTGCACTGCTACTG+AGG + chr6_2:31964714-31964733 None:intergenic 50.0%
CAAGATCCTGGCGCGATAAA+GGG + chr6_2:31964895-31964914 None:intergenic 50.0%
ACAAGATCCTGGCGCGATAA+AGG + chr6_2:31964896-31964915 None:intergenic 50.0%
GCTTCCTGAAGCTGACAGAA+AGG - chr6_2:31964946-31964965 Msa0915550:CDS 50.0%
GCAACCTTTCTGTCAGCTTC+AGG + chr6_2:31964953-31964972 None:intergenic 50.0%
CAGAAAGGTTGCTCAACTCG+CGG - chr6_2:31964961-31964980 Msa0915550:CDS 50.0%
ACTAGTGCAGGGCATGCATT+AGG + chr6_2:31965112-31965131 None:intergenic 50.0%
! TGATCTTTCTTCTGGGGAGC+AGG - chr6_2:31965135-31965154 Msa0915550:CDS 50.0%
! GATCTTTCTTCTGGGGAGCA+GGG - chr6_2:31965136-31965155 Msa0915550:CDS 50.0%
!! TCATTTTTCCCCCTGGATGG+GGG - chr6_2:31965302-31965321 Msa0915550:CDS 50.0%
AATAAACAGCCCCCCATCCA+GGG + chr6_2:31965315-31965334 None:intergenic 50.0%
GATGGGGGGCTGTTTATTCA+AGG - chr6_2:31965317-31965336 Msa0915550:CDS 50.0%
TCCAGTAGCAAGGGCAATAG+CGG + chr6_2:31965390-31965409 None:intergenic 50.0%
!! CAGAAGCATCTCCAGTAGCA+AGG + chr6_2:31965400-31965419 None:intergenic 50.0%
TGCCTTGGAGAAAGAACGTG+CGG - chr6_2:31965643-31965662 Msa0915550:intron 50.0%
ATGTCCAGTCTTGGGCATGA+GGG + chr6_2:31966043-31966062 None:intergenic 50.0%
TCCCTCACACCTTGATTGGA+TGG + chr6_2:31966310-31966329 None:intergenic 50.0%
ATCCAATCAAGGTGTGAGGG+AGG - chr6_2:31966309-31966328 Msa0915550:intron 50.0%
ACCATAGTAGCAGACATGGG+AGG + chr6_2:31966449-31966468 None:intergenic 50.0%
TAGAGGAGGCTAGAGATCGT+TGG - chr6_2:31967040-31967059 Msa0915550:intron 50.0%
AGAGGAGGCTAGAGATCGTT+GGG - chr6_2:31967041-31967060 Msa0915550:intron 50.0%
AGAGATCGTTGGGAGAGACA+CGG - chr6_2:31967051-31967070 Msa0915550:intron 50.0%
GGAGAGACACGGAATCAAAG+TGG - chr6_2:31967062-31967081 Msa0915550:intron 50.0%
GAGACACGGAATCAAAGTGG+TGG - chr6_2:31967065-31967084 Msa0915550:intron 50.0%
AGGCTTCAGCCGAAGTTACA+TGG - chr6_2:31967109-31967128 Msa0915550:intron 50.0%
GGGAGCAGTACTCAACTCAA+GGG - chr6_2:31967142-31967161 Msa0915550:intron 50.0%
CAACTCAAGGGTCAGTTGAC+AGG - chr6_2:31967154-31967173 Msa0915550:intron 50.0%
TGGAGAAGCTGCCATCTCAA+AGG - chr6_2:31967329-31967348 Msa0915550:intron 50.0%
! TGACTTGCCTGCCTTTGAGA+TGG + chr6_2:31967343-31967362 None:intergenic 50.0%
GGCACTATGCTGTAACTCGT+GGG + chr6_2:31967367-31967386 None:intergenic 50.0%
CAGCATAGTGCCGTCGAATT+TGG - chr6_2:31967375-31967394 Msa0915550:intron 50.0%
! GAAGGTACAAAGCGAGTTGC+TGG - chr6_2:31967411-31967430 Msa0915550:intron 50.0%
AGCGAGTTGCTGGTGATTGT+AGG - chr6_2:31967421-31967440 Msa0915550:intron 50.0%
GCGAGTTGCTGGTGATTGTA+GGG - chr6_2:31967422-31967441 Msa0915550:intron 50.0%
AATGACACAGCCTCTGTGTC+TGG + chr6_2:31967607-31967626 None:intergenic 50.0%
AGACACAGAGGCTGTGTCAT+TGG - chr6_2:31967606-31967625 Msa0915550:CDS 50.0%
!! GAGAAAGAGGGGGTTTGGTG+GGG + chr6_2:31959339-31959358 None:intergenic 55.0%
TGCACGGAGCAAAGAAGTGG+TGG + chr6_2:31959400-31959419 None:intergenic 55.0%
TTGCTCCGTGCATAACGCCA+AGG - chr6_2:31959408-31959427 Msa0915550:three_prime_UTR 55.0%
! GGTTGGTCCGATTCAGCAAC+TGG - chr6_2:31959478-31959497 Msa0915550:three_prime_UTR 55.0%
CGATTCAGCAACTGGGTCAC+TGG - chr6_2:31959486-31959505 Msa0915550:three_prime_UTR 55.0%
GTTGTGGGAGTAGGAGTTGC+TGG - chr6_2:31961301-31961320 Msa0915550:CDS 55.0%
TCGCATGAGAGAAGCCAGCT+AGG + chr6_2:31961398-31961417 None:intergenic 55.0%
! GGATCCCTTTTCTCTGCTCC+TGG - chr6_2:31962353-31962372 Msa0915550:intron 55.0%
ACTGATGGAGCAGGAATGCC+AGG + chr6_2:31962374-31962393 None:intergenic 55.0%
CACGTCCAACACTATTGGGC+TGG - chr6_2:31962811-31962830 Msa0915550:intron 55.0%
CGCATCCAGCCCAATAGTGT+TGG + chr6_2:31962819-31962838 None:intergenic 55.0%
! ACACTATTGGGCTGGATGCG+TGG - chr6_2:31962819-31962838 Msa0915550:CDS 55.0%
TGGCAAGTGGACCGCATCAA+TGG - chr6_2:31962848-31962867 Msa0915550:CDS 55.0%
CACGTCGTGAATATGCTCGC+TGG - chr6_2:31964204-31964223 Msa0915550:intron 55.0%
! CGCTGGTTGGTATCTGCTAG+CGG - chr6_2:31964221-31964240 Msa0915550:intron 55.0%
CTGCTAGCGGTGCTCTTTCA+AGG - chr6_2:31964234-31964253 Msa0915550:intron 55.0%
TTTCCAGGCTTGGCAGAAGC+TGG - chr6_2:31964554-31964573 Msa0915550:intron 55.0%
ACTGCACTGCTACTGAGGGT+GGG + chr6_2:31964709-31964728 None:intergenic 55.0%
!! CAGATGCTGCACCGACTTTC+TGG - chr6_2:31965061-31965080 Msa0915550:CDS 55.0%
! CATTTTTCCCCCTGGATGGG+GGG - chr6_2:31965303-31965322 Msa0915550:CDS 55.0%
ATAAACAGCCCCCCATCCAG+GGG + chr6_2:31965314-31965333 None:intergenic 55.0%
GAATAAACAGCCCCCCATCC+AGG + chr6_2:31965316-31965335 None:intergenic 55.0%
AGCAAGGGCAATAGCGGCTT+GGG + chr6_2:31965384-31965403 None:intergenic 55.0%
TAGCAAGGGCAATAGCGGCT+TGG + chr6_2:31965385-31965404 None:intergenic 55.0%
AGCCGCACGTTCTTTCTCCA+AGG + chr6_2:31965648-31965667 None:intergenic 55.0%
! GAAAAGCCTTGTCCATGGCC+AGG - chr6_2:31965849-31965868 Msa0915550:intron 55.0%
GATGTCCAGTCTTGGGCATG+AGG + chr6_2:31966044-31966063 None:intergenic 55.0%
CATGCCCAAGACTGGACATC+TGG - chr6_2:31966044-31966063 Msa0915550:intron 55.0%
! CATCTGGAGTTTGACCCGAG+AGG - chr6_2:31966060-31966079 Msa0915550:intron 55.0%
CACACACTATCAGGCCTCTC+GGG + chr6_2:31966077-31966096 None:intergenic 55.0%
CCACACACTATCAGGCCTCT+CGG + chr6_2:31966078-31966097 None:intergenic 55.0%
CACCTCCCTCACACCTTGAT+TGG + chr6_2:31966314-31966333 None:intergenic 55.0%
GCCTCCCATGTCTGCTACTA+TGG - chr6_2:31966445-31966464 Msa0915550:intron 55.0%
TGGAATCAGGACTTGGGCAG+AGG - chr6_2:31966981-31967000 Msa0915550:intron 55.0%
GGGGAGCAGTACTCAACTCA+AGG - chr6_2:31967141-31967160 Msa0915550:intron 55.0%
CGAATGGGTGCAGATCTCAG+AGG - chr6_2:31967204-31967223 Msa0915550:intron 55.0%
GAAGCTGCCATCTCAAAGGC+AGG - chr6_2:31967333-31967352 Msa0915550:intron 55.0%
CGGCACTATGCTGTAACTCG+TGG + chr6_2:31967368-31967387 None:intergenic 55.0%
!! AGGGGGTTTGGTGGGGTTGA+AGG + chr6_2:31959332-31959351 None:intergenic 60.0%
! GAAGTGGTGGAAGACGAGGG+TGG + chr6_2:31959387-31959406 None:intergenic 60.0%
TCCGTGCATAACGCCAAGGC+CGG - chr6_2:31959412-31959431 Msa0915550:three_prime_UTR 60.0%
!! AAGGCCGGCTCTGAATGGGT+CGG - chr6_2:31959427-31959446 Msa0915550:three_prime_UTR 60.0%
AGACCCGACCCATTCAGAGC+CGG + chr6_2:31959434-31959453 None:intergenic 60.0%
GCAGCTTTACAGGTGCCTCC+AGG - chr6_2:31962401-31962420 Msa0915550:intron 60.0%
AGTCCAGCTTCTGCCAAGCC+TGG + chr6_2:31964560-31964579 None:intergenic 60.0%
GACTGCACTGCTACTGAGGG+TGG + chr6_2:31964710-31964729 None:intergenic 60.0%
TAAACAGCCCCCCATCCAGG+GGG + chr6_2:31965313-31965332 None:intergenic 60.0%
!! GCGGCTTGGGCTTTTGTCAC+AGG + chr6_2:31965371-31965390 None:intergenic 60.0%
GCCGCTATTGCCCTTGCTAC+TGG - chr6_2:31965386-31965405 Msa0915550:CDS 60.0%
ACCTCCCTCATGCCCAAGAC+TGG - chr6_2:31966036-31966055 Msa0915550:intron 60.0%
TCCAGTCTTGGGCATGAGGG+AGG + chr6_2:31966040-31966059 None:intergenic 60.0%
! CCGAGAGGCCTGATAGTGTG+TGG - chr6_2:31966075-31966094 Msa0915550:intron 60.0%
GGTTGACGAAGACCTCCGCA+AGG - chr6_2:31967086-31967105 Msa0915550:intron 60.0%
TGACGAAGACCTCCGCAAGG+AGG - chr6_2:31967089-31967108 Msa0915550:intron 60.0%
CTTCGGCTGAAGCCTCCTTG+CGG + chr6_2:31967104-31967123 None:intergenic 60.0%
GCCGGCCTTGGCGTTATGCA+CGG + chr6_2:31959416-31959435 None:intergenic 65.0%
!! ACGCCAAGGCCGGCTCTGAA+TGG - chr6_2:31959422-31959441 Msa0915550:three_prime_UTR 65.0%
!! CGCCAAGGCCGGCTCTGAAT+GGG - chr6_2:31959423-31959442 Msa0915550:three_prime_UTR 65.0%
GACCCATTCAGAGCCGGCCT+TGG + chr6_2:31959428-31959447 None:intergenic 65.0%
!! AGGCCGGCTCTGAATGGGTC+GGG - chr6_2:31959428-31959447 Msa0915550:three_prime_UTR 65.0%
CTGCAGCCCTTTATCGCGCC+AGG - chr6_2:31964886-31964905 Msa0915550:CDS 65.0%
CGCGCCAGGATCTTGTCAGC+TGG - chr6_2:31964900-31964919 Msa0915550:CDS 65.0%
CGGCTGAAGCCTCCTTGCGG+AGG + chr6_2:31967101-31967120 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 31959183 31967885 31959183 ID=Msa0915550;Name=Msa0915550
chr6_2 mRNA 31959183 31967885 31959183 ID=Msa0915550-mRNA-1;Parent=Msa0915550;Name=Msa0915550-mRNA-1;_AED=0.04;_eAED=0.04;_QI=94|1|1|1|1|1|10|391|955
chr6_2 exon 31959183 31960078 31959183 ID=Msa0915550-mRNA-1:exon:5796;Parent=Msa0915550-mRNA-1
chr6_2 exon 31961198 31961729 31961198 ID=Msa0915550-mRNA-1:exon:5795;Parent=Msa0915550-mRNA-1
chr6_2 exon 31961890 31962004 31961890 ID=Msa0915550-mRNA-1:exon:5794;Parent=Msa0915550-mRNA-1
chr6_2 exon 31962101 31962176 31962101 ID=Msa0915550-mRNA-1:exon:5793;Parent=Msa0915550-mRNA-1
chr6_2 exon 31962408 31962507 31962408 ID=Msa0915550-mRNA-1:exon:5792;Parent=Msa0915550-mRNA-1
chr6_2 exon 31962593 31962696 31962593 ID=Msa0915550-mRNA-1:exon:5791;Parent=Msa0915550-mRNA-1
chr6_2 exon 31962813 31962901 31962813 ID=Msa0915550-mRNA-1:exon:5790;Parent=Msa0915550-mRNA-1
chr6_2 exon 31964575 31965563 31964575 ID=Msa0915550-mRNA-1:exon:5789;Parent=Msa0915550-mRNA-1
chr6_2 exon 31965683 31965769 31965683 ID=Msa0915550-mRNA-1:exon:5788;Parent=Msa0915550-mRNA-1
chr6_2 exon 31967521 31967885 31967521 ID=Msa0915550-mRNA-1:exon:5787;Parent=Msa0915550-mRNA-1
chr6_2 five_prime_UTR 31967792 31967885 31967792 ID=Msa0915550-mRNA-1:five_prime_utr;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31967521 31967791 31967521 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31965683 31965769 31965683 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31964575 31965563 31964575 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31962813 31962901 31962813 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31962593 31962696 31962593 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31962408 31962507 31962408 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31962101 31962176 31962101 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31961890 31962004 31961890 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31961198 31961729 31961198 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 CDS 31959574 31960078 31959574 ID=Msa0915550-mRNA-1:cds;Parent=Msa0915550-mRNA-1
chr6_2 three_prime_UTR 31959183 31959573 31959183 ID=Msa0915550-mRNA-1:three_prime_utr;Parent=Msa0915550-mRNA-1
Gene Sequence

>Msa0915550

ATGGCTTCAATTTCACCCACATGTTCACCAACTTCTCTTCAACTCCGATTAGCCTTCAACCCCACCAAACCCCCTCTTTCTCATCACGTCAGACTTCGCAACATCAACCACCCTCGTCTTCCACCACTTCTTTGCTCCGTGCATAACGCCAAGGCCGGCTCTGAATGGGTCGGGTCTGATTCTAAAGGTGATGGGTTATCGGGTTGGTCCGATTCAGCAACTGGGTCACTGGATAATGATTCCCAGAAGAAGAAGAAGGAATCTTTTGGAGGAGTTGTGGGAGTAGGAGTTGCTGGAGTCCTTCTTTTTACCGGGCTTACCTATTTTGCCTTATCTCTTGGAAAACGAAATGGTTCCAAAGAGGAGCAACAATTGAAGCCTTTGACAACACATCAGGAGGTGCTTTTGTCTTCTGATGCCGATATTACAGGACAAGTAAATGCTGAGAACAAGTTGGAGCAAGAAAATGGTAAATTGGAAGGTCAGATAGATACATCCCGGGATTATTCATCTCCTGAGTCCGATAACATTCAAGGTGACTATAGAACTATTGATGATTCTGATATAGGATCGGAGTTGGTATACGATAGCAAAAACACCTCCAATGGTATCAATGATGCCACTGAATATATATCTGTTCAAGAAGACTTGTTGCATGAGTCAGCTCGGGATGACGAGTTAATTGTTCCCAGTGAAAACCAAATACCACTTCAAACTGAAAATACTCTTGATTCTTTTAGTGATTTTGATAGCAATTCGGCTGTAGATAAAACAGAATCTACTGCCTATCTTAAAGAAAACCAATTTAATGCTGAACCAGAAAACATACCCAATTATGATGGTAAGCCAGTAGACCTTAATAATGAGCAGCAGGATGAAATAACCAGTTCAAGTGAGATTAGAAATTCTGATATTTCCAAAACCTCATCTGGTTTAGGTGCTGATAATAAGACTGAAACTGTTAGTACTGTGGTAAATCCTGAGTCAAACAACACAATTTCTGACCCTAAGATTTTAAGCGAAGATGATCAAGACAATATTGGCCTTAACAAAACTCAACAGGTCTTATATGAGGAACAGAGTATCCCTGGAAATTACCATTTAAGTAAATCAGTATTCTCACCATTGACCAATTCATCATTAGATGATCAGGTTAGAAATGAGAATAATGAGATTAATAAAGAAATTTCTGAATCTCCAAATTCTGGATCCCTTTTCTCTGCTCCTGGCATTCCTGCTCCATCAGTAGTTTCTGCAGCTTTACAGGTGCCTCCAGGAAAGGTTTTGATTCCTGCAGCTTTTGATCAGGTTCAGGGACATGCACTAGCTGCATTGCAAGTTTTAAAGGTCATTGAGCCTGATGTTCAACCTGGTGATTTATGCACACGTCGTGAATATGCTCGCTGGTTGGTATCTGCTAGCGGTGCTCTTTCAAGGAATGCGGTTTCGAAAGTGTATCCTGCCATGTACATAGATAATGCTACTGAACTTGCATTTGATGACATCACCCCTGAGGACCCTGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAAAGCAGGCTCTCAAGACGTGATGCACAGTTGTCTGCTAATGAAGACAATAGCCCTTTTTACTTCTCCCCTGAAAGCCCTTTATCGCGCCAGGATCTTGTCAGCTGGAAAATGGCCCTAGAGAAAAGACAGCTTCCTGAAGCTGACAGAAAGATGCTGCACCGACTTTCTGGTTTTATAGACACTGATAAGATACATCCTAATGCATGCCCTGCACTAGTAGCTGATCTTTCTTCTGGGGAGCAGGGAATAATTGCTCTTGCATTTGGTTATACACGATTGTTCCAACCAGATAAACCTGTGACAAAAGCCCAAGCCGCTATTGCCCTTGCTACTGGAGATGCTTCTGACATAGTTAGTGAAGAGCTTGCACGCATTGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCACATAGTGCTTTAGTAGCTCAAGTTGAGAGAGATATTAATGCCAGTTATGAACAGGAGCTTTTGTTAGAGAGGGAAAAGATCAATGCAATTGAAAAAATGGCTGAAGAGGCAAAACATGAGTTGGAAACGTTAAGAGCTCAGAGAGAAGAAGACAGTGTTGCCTTGGAGAAAGAACGTGCGGCTATTGAATCAGAAATGGAGGTTTTTTCAAAGTTAAGGAATGAGGTTCAGGATCAATTACAAAGTCTAATGAGTAACAAGGTAGAAATAGCATATGAAAAAGAGAGGATCAAGAAGCTTCGGGAGCAGACAGAAATTGAAAACAACGAGATTACCCGTTTACAGTATGATCTAGAGGTTGAACGAAAAGCCTTGTCCATGGCCAGGACTTGGGCAGAGGATGAAGCCAAACGAGTGAGAGAACAAGCAAGAGCATTAGAGGAGGCTAGAGATCGTTGGGAGAGACACGGAATCAAAGTGGTGGTTGACGAAGACCTCCGCAAGGAGGCTTCAGCCGAAGTTACATGGCTCAATGCTGGGGAGCAGTACTCAACTCAAGGGTCAGTTGACAGGGCTGAAAGCTTATTGGAGAAGCTCAAACGAATGGGTGCAGATCTCAGAGGAAAATGCAGAGAAACAATTGACAAGATCATCCTCATGGTTTCCCAATTTATATCAAAATTGAAGGAATGGGCCTCCAAAACAAAATTACAGGCTGAAGAATTTGGAGAAGCTGCCATCTCAAAGGCAGGCAAGTCAGCCCACGAGTTACAGCATAGTGCCGTCGAATTTGGATTAACTGTAAAAGAAGGTACAAAGCGAGTTGCTGGTGATTGTAGGGAAGTAGTTGAGAAAATCACCCAAAAGTTCGCTCATAAGTTCAAGACTTGA
Protein sequence

>Msa0915550

MASISPTCSPTSLQLRLAFNPTKPPLSHHVRLRNINHPRLPPLLCSVHNAKAGSEWVGSDSKGDGLSGWSDSATGSLDNDSQKKKKESFGGVVGVGVAGVLLFTGLTYFALSLGKRNGSKEEQQLKPLTTHQEVLLSSDADITGQVNAENKLEQENGKLEGQIDTSRDYSSPESDNIQGDYRTIDDSDIGSELVYDSKNTSNGINDATEYISVQEDLLHESARDDELIVPSENQIPLQTENTLDSFSDFDSNSAVDKTESTAYLKENQFNAEPENIPNYDGKPVDLNNEQQDEITSSSEIRNSDISKTSSGLGADNKTETVSTVVNPESNNTISDPKILSEDDQDNIGLNKTQQVLYEEQSIPGNYHLSKSVFSPLTNSSLDDQVRNENNEINKEISESPNSGSLFSAPGIPAPSVVSAALQVPPGKVLIPAAFDQVQGHALAALQVLKVIEPDVQPGDLCTRREYARWLVSASGALSRNAVSKVYPAMYIDNATELAFDDITPEDPDFSSIQGLAEAGLIESRLSRRDAQLSANEDNSPFYFSPESPLSRQDLVSWKMALEKRQLPEADRKMLHRLSGFIDTDKIHPNACPALVADLSSGEQGIIALAFGYTRLFQPDKPVTKAQAAIALATGDASDIVSEELARIEAESIAENAVAAHSALVAQVERDINASYEQELLLEREKINAIEKMAEEAKHELETLRAQREEDSVALEKERAAIESEMEVFSKLRNEVQDQLQSLMSNKVEIAYEKERIKKLREQTEIENNEITRLQYDLEVERKALSMARTWAEDEAKRVREQARALEEARDRWERHGIKVVVDEDLRKEASAEVTWLNAGEQYSTQGSVDRAESLLEKLKRMGADLRGKCRETIDKIILMVSQFISKLKEWASKTKLQAEEFGEAAISKAGKSAHELQHSAVEFGLTVKEGTKRVAGDCREVVEKITQKFAHKFKT*