AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1241430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241430 MtrunA17_Chr8g0354141 96.330 218 7 1 23 240 25 241 3.40e-156 433
Msa1241430 MtrunA17_Chr3g0093771 61.616 99 36 1 36 134 25 121 5.86e-37 126
Msa1241430 MtrunA17_Chr5g0441261 51.000 100 48 1 42 140 5 104 1.27e-30 109
Msa1241430 MtrunA17_Chr3g0097041 49.505 101 47 3 42 141 63 160 8.36e-24 94.0
Msa1241430 MtrunA17_Chr4g0076001 41.379 87 48 2 41 126 28 112 8.39e-14 65.9
Msa1241430 MtrunA17_Chr2g0290101 35.897 117 65 3 11 127 8 114 1.16e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241430 AT3G12490.2 62.931 232 81 2 5 236 4 230 1.09e-98 287
Msa1241430 AT3G12490.1 68.790 157 47 1 40 196 3 157 3.71e-73 220
Msa1241430 AT5G05110.1 56.021 191 79 2 42 231 46 232 3.83e-70 215
Msa1241430 AT2G40880.1 57.843 102 43 0 28 129 22 123 8.29e-39 131
Msa1241430 AT5G12140.1 50.515 97 48 0 35 131 4 100 3.90e-29 105
Msa1241430 AT5G47550.1 41.250 80 46 1 55 133 41 120 4.18e-13 64.7

Find 99 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATGTATCGTTCAAGTTT+AGG 0.229745 8_2:+24997776 Msa1241430:three_prime_UTR
CTTGGTCACAGTAGCATTAT+AGG 0.244708 8_2:+24997375 Msa1241430:three_prime_UTR
CTATGTATCGTTCAAGTTTA+GGG 0.268469 8_2:+24997777 Msa1241430:three_prime_UTR
TTCAGATCTTGGTGTGATAA+AGG 0.306420 8_2:+24995241 Msa1241430:CDS
TCATTTACCTCTTCAGATCT+TGG 0.349534 8_2:+24995230 Msa1241430:CDS
GGTGTTGTAGAATTCACTTC+TGG 0.352339 8_2:+24995028 Msa1241430:intron
AGATCTATGAAGCCAAAGTC+TGG 0.352484 8_2:+24995141 Msa1241430:CDS
CTATGGATATAGCATGTGTT+AGG 0.363855 8_2:+24997645 Msa1241430:three_prime_UTR
TTCACTGTTCTAGAATCTTC+CGG 0.371100 8_2:+24993695 Msa1241430:CDS
CTCATAGGGCACTAGTGAAT+TGG 0.373021 8_2:-24996479 None:intergenic
CATGTGTTAGGGAAAACTAT+TGG 0.389122 8_2:+24997657 Msa1241430:three_prime_UTR
TCAGTGCTTTCTTTATGCCT+TGG 0.393557 8_2:+24997513 Msa1241430:three_prime_UTR
GCGAAGTGGTTGCTCTCATT+AGG 0.398542 8_2:-24993637 None:intergenic
AGAAACCTCATGGAGCTCAT+AGG 0.403459 8_2:-24996494 None:intergenic
AACTAATGCAATTAAGATCA+TGG 0.406774 8_2:-24997586 None:intergenic
TGATGGTTTCATTTATATCA+AGG 0.413492 8_2:+24997559 Msa1241430:three_prime_UTR
GGTTTGTTTGTTACTTACTT+AGG 0.414843 8_2:-24993616 None:intergenic
TGGTTTAACGCAGTAGTGTT+GGG 0.425214 8_2:-24993575 None:intergenic
GGTGGTGAAAGCACGGGAAC+AGG 0.431902 8_2:+24995061 Msa1241430:CDS
CTGCTTCCATCTGATTAAGA+TGG 0.437286 8_2:-24997328 None:intergenic
GCTGGAACCGACTGCCAACC+TGG 0.437555 8_2:-24996397 None:intergenic
CTAGTGAATTGGACCTCTGC+TGG 0.439707 8_2:-24996468 None:intergenic
GGAATGAAAGAAGTGTGCTT+TGG 0.443561 8_2:-24993595 None:intergenic
AGCACATGACCCTCAAGTTC+AGG 0.447338 8_2:+24996417 Msa1241430:CDS
CATTTGCGCGTGATCGAAAT+CGG 0.448077 8_2:-24993726 None:intergenic
ATGTGTTAGGGAAAACTATT+GGG 0.448490 8_2:+24997658 Msa1241430:three_prime_UTR
CTAAACTAGGAATACCTGTT+TGG 0.448700 8_2:-24993846 None:intergenic
ATCGAAATCGGAACAGTGAC+CGG 0.449810 8_2:-24993714 None:intergenic
GCACGGGAACAGGTTGTTGC+TGG 0.454927 8_2:+24995071 Msa1241430:CDS
TCAGATCTTGGTGTGATAAA+GGG 0.457739 8_2:+24995242 Msa1241430:CDS
CCTAGTCCTACTATTAAGCT+TGG 0.463961 8_2:+24997357 Msa1241430:exon
TTGGTTTAACGCAGTAGTGT+TGG 0.466467 8_2:-24993576 None:intergenic
TTGTTGACTAGGGATTACTA+TGG 0.467786 8_2:+24997628 Msa1241430:three_prime_UTR
GCTTGTACCGACTAAGTTCA+TGG 0.470198 8_2:+24997683 Msa1241430:three_prime_UTR
TTATCAGATGGCCACAAGCC+AGG 0.483576 8_2:+24996379 Msa1241430:intron
CTTGAGAAGCAAGTTAAACT+TGG 0.487025 8_2:-24997240 None:intergenic
CTTGCTTCTCAAGGTCAAGC+GGG 0.490732 8_2:+24997250 Msa1241430:CDS
AAGTTCTTTAAAGTTCATCC+AGG 0.491331 8_2:-24995171 None:intergenic
GAGGAAGAAGAAGAATAAGA+AGG 0.495659 8_2:-24993666 None:intergenic
TGATCAACACAACACCAAAC+AGG 0.497271 8_2:+24993832 Msa1241430:CDS
GAAACCTCATGGAGCTCATA+GGG 0.500032 8_2:-24996493 None:intergenic
AGGAAGAAGAAGAATAAGAA+GGG 0.501335 8_2:-24993665 None:intergenic
TGAAAATGTGTTTGTTGACT+AGG 0.514834 8_2:+24997617 Msa1241430:three_prime_UTR
TGAACTTGAGGGTCATGTGC+TGG 0.515021 8_2:-24996415 None:intergenic
CAAGTTTAACTTGCTTCTCA+AGG 0.515944 8_2:+24997241 Msa1241430:CDS
CTGTGACCAAGCTTAATAGT+AGG 0.519301 8_2:-24997363 None:intergenic
TCGTGAATACCTCCGGGGAG+TGG 0.522213 8_2:-24993755 None:intergenic
GACTAAGTTCATGGATGTAA+AGG 0.524728 8_2:+24997692 Msa1241430:three_prime_UTR
TAACTTCCATCTTAATCAGA+TGG 0.525361 8_2:+24997322 Msa1241430:CDS
ACTAATGCAATTAAGATCAT+GGG 0.525700 8_2:-24997585 None:intergenic
AGAAGAGAAGTTCAAGGTAG+AGG 0.530018 8_2:+24997280 Msa1241430:CDS
CCAAGCTTAATAGTAGGACT+AGG 0.530391 8_2:-24997357 None:intergenic
TTGCTGCATCCTGAACTTGA+GGG 0.533051 8_2:-24996426 None:intergenic
TATGGATATAGCATGTGTTA+GGG 0.542780 8_2:+24997646 Msa1241430:three_prime_UTR
CTTACTGAGTTCAAGCATGC+TGG 0.544063 8_2:+24995191 Msa1241430:CDS
GGGGAATCGTGAATACCTCC+GGG 0.546261 8_2:-24993761 None:intergenic
ATTCACTTCTGGAGTTCGCA+AGG 0.554851 8_2:+24995039 Msa1241430:CDS
ACAGAAAGAAGAGAAGTTCA+AGG 0.554921 8_2:+24997274 Msa1241430:CDS
TTTGCTGCATCCTGAACTTG+AGG 0.555812 8_2:-24996427 None:intergenic
GAAAATGTGTTTGTTGACTA+GGG 0.556471 8_2:+24997618 Msa1241430:three_prime_UTR
TCGCAAGGGTGGTGAAAGCA+CGG 0.557056 8_2:+24995054 Msa1241430:CDS
CCATGAGGTTTCTGATGCGA+AGG 0.562730 8_2:+24996504 Msa1241430:CDS
CAGATGGCCACAAGCCAGGT+TGG 0.562783 8_2:+24996383 Msa1241430:intron
CAAATGGCCACTCCACTCCC+CGG 0.566217 8_2:+24993743 Msa1241430:CDS
GATCTATGAAGCCAAAGTCT+GGG 0.570925 8_2:+24995142 Msa1241430:CDS
ACTCTCGAGGCTATAGATGC+GGG 0.573383 8_2:+24995110 Msa1241430:CDS
TGAATTGGACCTCTGCTGGA+TGG 0.574153 8_2:-24996464 None:intergenic
TTTACATCCATGAACTTAGT+CGG 0.574726 8_2:-24997690 None:intergenic
TACTCTCGAGGCTATAGATG+CGG 0.578669 8_2:+24995109 Msa1241430:CDS
CCTTCGCATCAGAAACCTCA+TGG 0.585550 8_2:-24996504 None:intergenic
TAAGTTGCAAAACAATAACT+AGG 0.585551 8_2:-24997536 None:intergenic
AGATCTGAAGAGGTAAATGA+TGG 0.591467 8_2:-24995227 None:intergenic
CGCAAGGGTGGTGAAAGCAC+GGG 0.592671 8_2:+24995055 Msa1241430:CDS
TATCACACCAAGATCTGAAG+AGG 0.592973 8_2:-24995237 None:intergenic
ACTTCTGGAGTTCGCAAGGG+TGG 0.593021 8_2:+24995043 Msa1241430:CDS
CCAAAGTCTGGGTAAAACCC+TGG 0.593767 8_2:+24995153 Msa1241430:CDS
CCGACTGCCAACCTGGCTTG+TGG 0.593906 8_2:-24996390 None:intergenic
GGTTTCTGATGCGAAGGCTG+AGG 0.594893 8_2:+24996510 Msa1241430:CDS
GAGTTCAAGCATGCTGGTGA+TGG 0.594970 8_2:+24995197 Msa1241430:CDS
AATACCTCCGGGGAGTGGAG+TGG 0.595891 8_2:-24993750 None:intergenic
AGTTCTTTAAAGTTCATCCA+GGG 0.602713 8_2:-24995170 None:intergenic
TTCACTTCTGGAGTTCGCAA+GGG 0.604248 8_2:+24995040 Msa1241430:CDS
TAAGAAGGGAAGAAGCGAAG+TGG 0.605131 8_2:-24993651 None:intergenic
ACTTGCTTCTCAAGGTCAAG+CGG 0.606587 8_2:+24997249 Msa1241430:CDS
GCAAAACAATAACTAGGCCA+AGG 0.613518 8_2:-24997530 None:intergenic
CGGAGACAAAGCAATACATA+CGG 0.617508 8_2:+24993535 Msa1241430:five_prime_UTR
TGCAAATTTAGGGTCCACGC+AGG 0.619749 8_2:-24997398 None:intergenic
CCACAAGCCAGGTTGGCAGT+CGG 0.633993 8_2:+24996390 Msa1241430:CDS
TGTTAGGGAAAACTATTGGG+AGG 0.657890 8_2:+24997661 Msa1241430:three_prime_UTR
CTGTTAAGACCATCCAGCAG+AGG 0.662004 8_2:+24996455 Msa1241430:CDS
TTGCTTCTCAAGGTCAAGCG+GGG 0.670149 8_2:+24997251 Msa1241430:CDS
AGTAGCATTATAGGCCTGCG+TGG 0.681871 8_2:+24997384 Msa1241430:three_prime_UTR
CTAGAACAGTGAATATAGCG+AGG 0.693332 8_2:-24993685 None:intergenic
ACTGCATCATCTTACTCTCG+AGG 0.693606 8_2:+24995097 Msa1241430:CDS
GAGGTGCACAAGAATAACGA+AGG 0.697526 8_2:+24997299 Msa1241430:CDS
GGCTTCGAAACTAAGCAACA+CGG 0.724262 8_2:+24993515 Msa1241430:five_prime_UTR
AGTGCCCTATGAGCTCCATG+AGG 0.734165 8_2:+24996489 Msa1241430:CDS
ATGGCCACTCCACTCCCCGG+AGG 0.738502 8_2:+24993746 Msa1241430:CDS
GGGAATCGTGAATACCTCCG+GGG 0.776720 8_2:-24993760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAAAAGTGAAAATT+AGG + chr8_2:24996669-24996688 Msa1241430:intron 10.0%
!!! AATTGTTTTATTATAAGCTA+TGG + chr8_2:24994139-24994158 Msa1241430:intron 15.0%
!! AAAAAATCAACAATTAAGAA+GGG - chr8_2:24995365-24995384 None:intergenic 15.0%
!! TAAAAAATCAACAATTAAGA+AGG - chr8_2:24995366-24995385 None:intergenic 15.0%
!! GTAAAATAATTGATAAAGTT+AGG - chr8_2:24995466-24995485 None:intergenic 15.0%
!! ATAAAATAACAGAAACTATA+AGG - chr8_2:24995833-24995852 None:intergenic 15.0%
!!! AAATTTTTCAAATTTTCTGA+GGG + chr8_2:24995946-24995965 Msa1241430:intron 15.0%
!!! TTTTATCAGTTAAAATTGTT+TGG + chr8_2:24996952-24996971 Msa1241430:intron 15.0%
!!! ATATAAAAAGTGCAAATTTA+GGG - chr8_2:24997411-24997430 None:intergenic 15.0%
!!! TATATAAAAAGTGCAAATTT+AGG - chr8_2:24997412-24997431 None:intergenic 15.0%
!!! AAATTTGCACTTTTTATATA+TGG + chr8_2:24997412-24997431 Msa1241430:three_prime_UTR 15.0%
!!! AATTTGCACTTTTTATATAT+GGG + chr8_2:24997413-24997432 Msa1241430:three_prime_UTR 15.0%
!!! TTTTTAGACATATATAACAA+GGG - chr8_2:24997487-24997506 None:intergenic 15.0%
!!! TTTTTTAGACATATATAACA+AGG - chr8_2:24997488-24997507 None:intergenic 15.0%
!! AGTTGTTTGTGATTATAATA+AGG + chr8_2:24993881-24993900 Msa1241430:intron 20.0%
!!! TTCTTTATTTCTACAACAAA+AGG + chr8_2:24994102-24994121 Msa1241430:intron 20.0%
!! TACAACAAAAGGTAAAAATA+AGG + chr8_2:24994113-24994132 Msa1241430:intron 20.0%
!!! TATATTTTTTACAACACCAA+CGG - chr8_2:24994584-24994603 None:intergenic 20.0%
!! TCTATGAAATTAACAAAAGT+AGG - chr8_2:24994651-24994670 None:intergenic 20.0%
!! CATTTAAGTACAATAATGTT+CGG + chr8_2:24994744-24994763 Msa1241430:intron 20.0%
!!! GCTGATATTTTTTATTTTTG+AGG + chr8_2:24994910-24994929 Msa1241430:intron 20.0%
!! TAATCATTACAAGAAATAAG+CGG - chr8_2:24995286-24995305 None:intergenic 20.0%
!! TATTTCTTGTAATGATTAAC+AGG + chr8_2:24995288-24995307 Msa1241430:intron 20.0%
!!! GAAATTTTTCAAATTTTCTG+AGG + chr8_2:24995945-24995964 Msa1241430:intron 20.0%
!! AGTATTATAACATCATAGAT+TGG + chr8_2:24996025-24996044 Msa1241430:intron 20.0%
!!! TAGAAAAAATGTCATTTAGA+AGG + chr8_2:24996610-24996629 Msa1241430:intron 20.0%
!! CGATAATATACAAAATACAA+GGG - chr8_2:24996805-24996824 None:intergenic 20.0%
!! ACGATAATATACAAAATACA+AGG - chr8_2:24996806-24996825 None:intergenic 20.0%
!! TAAATAAACTCCATATCTTT+GGG - chr8_2:24997114-24997133 None:intergenic 20.0%
!!! TCAGAGTTAGATATAATTTT+AGG + chr8_2:24997744-24997763 Msa1241430:three_prime_UTR 20.0%
!! TTAAGTTGTTTATCCAAACA+AGG - chr8_2:24993907-24993926 None:intergenic 25.0%
!! ATTGACTTTGACTTATTTCT+TGG + chr8_2:24993950-24993969 Msa1241430:intron 25.0%
! ATTCAAGATAACATTAGCAT+AGG - chr8_2:24994418-24994437 None:intergenic 25.0%
! TGCTAATGTTATCTTGAATT+TGG + chr8_2:24994419-24994438 Msa1241430:intron 25.0%
! TAAATGATCTCATCAATTGA+TGG + chr8_2:24994549-24994568 Msa1241430:intron 25.0%
! AAATGATCTCATCAATTGAT+GGG + chr8_2:24994550-24994569 Msa1241430:intron 25.0%
! ACACATGTTTGATAAAAAAC+AGG + chr8_2:24994807-24994826 Msa1241430:intron 25.0%
! CACATGTTTGATAAAAAACA+GGG + chr8_2:24994808-24994827 Msa1241430:intron 25.0%
! ACATGTTTGATAAAAAACAG+GGG + chr8_2:24994809-24994828 Msa1241430:intron 25.0%
!!! CTCTCTTTTCATTGATTTAA+GGG - chr8_2:24995488-24995507 None:intergenic 25.0%
!!! ACTCTCTTTTCATTGATTTA+AGG - chr8_2:24995489-24995508 None:intergenic 25.0%
! AAGTTACTCTTACATTTCAT+AGG - chr8_2:24995527-24995546 None:intergenic 25.0%
!! TGATCACTCAACATATTTTA+AGG - chr8_2:24995597-24995616 None:intergenic 25.0%
! TCCATTGAAAATGTAGAAAA+AGG + chr8_2:24995770-24995789 Msa1241430:intron 25.0%
! GTAAATTCCCAATAAAATTC+AGG - chr8_2:24995811-24995830 None:intergenic 25.0%
! TAAGTAAAAAAGACACTCTA+AGG + chr8_2:24995852-24995871 Msa1241430:intron 25.0%
!!! GATCAATGCACTTTTAATTT+TGG + chr8_2:24996001-24996020 Msa1241430:intron 25.0%
! ATAACATCATAGATTGGATT+TGG + chr8_2:24996031-24996050 Msa1241430:intron 25.0%
! TGGGAACTAAAAAATTGTAT+CGG - chr8_2:24996079-24996098 None:intergenic 25.0%
! AGAAGGAAAGAAAAAAAAGA+AGG - chr8_2:24996171-24996190 None:intergenic 25.0%
! GTTAATAACTATGGTGATAA+CGG - chr8_2:24996238-24996257 None:intergenic 25.0%
! CACATATCAGTTAATAACTA+TGG - chr8_2:24996247-24996266 None:intergenic 25.0%
!! TGTACTAAGTTCTTTTACAT+CGG + chr8_2:24996268-24996287 Msa1241430:intron 25.0%
! GCATTTCAAAACTAGAAATA+AGG - chr8_2:24996542-24996561 None:intergenic 25.0%
!!! GTTTTTTCTGAACAAAGAAA+TGG + chr8_2:24996876-24996895 Msa1241430:intron 25.0%
! AACAAAGAAATGGCAAAATA+GGG + chr8_2:24996886-24996905 Msa1241430:intron 25.0%
!!! AAAATTGTTTGGTTTGACAA+TGG + chr8_2:24996963-24996982 Msa1241430:intron 25.0%
! CTAAATAAACTCCATATCTT+TGG - chr8_2:24997115-24997134 None:intergenic 25.0%
! TAAGTTGCAAAACAATAACT+AGG - chr8_2:24997539-24997558 None:intergenic 25.0%
!!! TATTGTTTTGCAACTTATGA+TGG + chr8_2:24997542-24997561 Msa1241430:three_prime_UTR 25.0%
! TGATGGTTTCATTTATATCA+AGG + chr8_2:24997559-24997578 Msa1241430:three_prime_UTR 25.0%
! ACTAATGCAATTAAGATCAT+GGG - chr8_2:24997588-24997607 None:intergenic 25.0%
! AACTAATGCAATTAAGATCA+TGG - chr8_2:24997589-24997608 None:intergenic 25.0%
!!! GAACGATACATAGTTTTATA+AGG - chr8_2:24997770-24997789 None:intergenic 25.0%
! GGTTTGTTTGTTACTTACTT+AGG - chr8_2:24993619-24993638 None:intergenic 30.0%
AGGAAGAAGAAGAATAAGAA+GGG - chr8_2:24993668-24993687 None:intergenic 30.0%
TCATATGAACCAACTAAACT+AGG - chr8_2:24993862-24993881 None:intergenic 30.0%
!! GATTATAATAAGGCCTTGTT+TGG + chr8_2:24993891-24993910 Msa1241430:intron 30.0%
CTACATGTATAAACACTAGT+GGG - chr8_2:24994238-24994257 None:intergenic 30.0%
TCTACATGTATAAACACTAG+TGG - chr8_2:24994239-24994258 None:intergenic 30.0%
TTGTCAATTGTGATCTCTAA+AGG + chr8_2:24994357-24994376 Msa1241430:intron 30.0%
AATGTTATCTTGAATTTGGC+TGG + chr8_2:24994423-24994442 Msa1241430:intron 30.0%
AAGCTTAATAAAGCAGTATC+TGG + chr8_2:24994670-24994689 Msa1241430:intron 30.0%
GTACTTAAATGACCAACATT+TGG - chr8_2:24994735-24994754 None:intergenic 30.0%
TTTATCCAATCAATACAACC+AGG - chr8_2:24994772-24994791 None:intergenic 30.0%
CATGTTTGATAAAAAACAGG+GGG + chr8_2:24994810-24994829 Msa1241430:intron 30.0%
ATGTTTGATAAAAAACAGGG+GGG + chr8_2:24994811-24994830 Msa1241430:intron 30.0%
!!! AACTGTTGACTTTTGTCAAA+TGG + chr8_2:24995007-24995026 Msa1241430:intron 30.0%
!! AGTTCTTTAAAGTTCATCCA+GGG - chr8_2:24995173-24995192 None:intergenic 30.0%
!! AAGTTCTTTAAAGTTCATCC+AGG - chr8_2:24995174-24995193 None:intergenic 30.0%
AACAATTAAGAAGGGACAAA+GGG - chr8_2:24995357-24995376 None:intergenic 30.0%
AAAGAGAGTAAATTAGTGAG+TGG + chr8_2:24995500-24995519 Msa1241430:intron 30.0%
AAATATGTTGAGTGATCAGA+AGG + chr8_2:24995599-24995618 Msa1241430:intron 30.0%
ATCATATTTAGTGCAACATC+AGG + chr8_2:24995723-24995742 Msa1241430:intron 30.0%
! GCCTTTTTCTACATTTTCAA+TGG - chr8_2:24995774-24995793 None:intergenic 30.0%
AAATGTAGAAAAAGGCTTGT+AGG + chr8_2:24995778-24995797 Msa1241430:intron 30.0%
TAAAAAATTGTATCGGAGGA+AGG - chr8_2:24996072-24996091 None:intergenic 30.0%
GAACTAAAAAATTGTATCGG+AGG - chr8_2:24996076-24996095 None:intergenic 30.0%
TGGAAATTATAGAGCTCTTT+GGG - chr8_2:24996142-24996161 None:intergenic 30.0%
GAAAAAAAAGAAGGAAGAAG+TGG - chr8_2:24996162-24996181 None:intergenic 30.0%
!!! GTTCTGTTTTTGTTATCAGA+TGG + chr8_2:24996367-24996386 Msa1241430:intron 30.0%
CATGCAAGAATAGTACTAAA+TGG - chr8_2:24996728-24996747 None:intergenic 30.0%
GAACAAAGAAATGGCAAAAT+AGG + chr8_2:24996885-24996904 Msa1241430:intron 30.0%
AATGCAGATTCTCTTATGTT+TGG - chr8_2:24997147-24997166 None:intergenic 30.0%
AACATAAGAGAATCTGCATT+TGG + chr8_2:24997147-24997166 Msa1241430:intron 30.0%
ACATAAGAGAATCTGCATTT+GGG + chr8_2:24997148-24997167 Msa1241430:intron 30.0%
TAACTTCCATCTTAATCAGA+TGG + chr8_2:24997322-24997341 Msa1241430:CDS 30.0%
! TGAAAATGTGTTTGTTGACT+AGG + chr8_2:24997617-24997636 Msa1241430:three_prime_UTR 30.0%
! GAAAATGTGTTTGTTGACTA+GGG + chr8_2:24997618-24997637 Msa1241430:three_prime_UTR 30.0%
TATGGATATAGCATGTGTTA+GGG + chr8_2:24997646-24997665 Msa1241430:three_prime_UTR 30.0%
ATGTGTTAGGGAAAACTATT+GGG + chr8_2:24997658-24997677 Msa1241430:three_prime_UTR 30.0%
TTTACATCCATGAACTTAGT+CGG - chr8_2:24997693-24997712 None:intergenic 30.0%
! ACTATGTATCGTTCAAGTTT+AGG + chr8_2:24997776-24997795 Msa1241430:three_prime_UTR 30.0%
! CTATGTATCGTTCAAGTTTA+GGG + chr8_2:24997777-24997796 Msa1241430:three_prime_UTR 30.0%
GAGGAAGAAGAAGAATAAGA+AGG - chr8_2:24993669-24993688 None:intergenic 35.0%
!! TTCACTGTTCTAGAATCTTC+CGG + chr8_2:24993695-24993714 Msa1241430:CDS 35.0%
CTAAACTAGGAATACCTGTT+TGG - chr8_2:24993849-24993868 None:intergenic 35.0%
ACAGGTATTCCTAGTTTAGT+TGG + chr8_2:24993850-24993869 Msa1241430:intron 35.0%
TTAACAACTATGAGCCTGTT+TGG + chr8_2:24993927-24993946 Msa1241430:intron 35.0%
AAGTCAAAGTCAATCCAAAC+AGG - chr8_2:24993944-24993963 None:intergenic 35.0%
TGGTTTGATTCTTGGTTAGT+TGG + chr8_2:24994690-24994709 Msa1241430:intron 35.0%
! CATTTGGAGGAACACAATTT+TGG - chr8_2:24994719-24994738 None:intergenic 35.0%
AATTGTGTTCCTCCAAATGT+TGG + chr8_2:24994720-24994739 Msa1241430:intron 35.0%
CTTAAATGACCAACATTTGG+AGG - chr8_2:24994732-24994751 None:intergenic 35.0%
TGTTTGATAAAAAACAGGGG+GGG + chr8_2:24994812-24994831 Msa1241430:intron 35.0%
GGGGGGGATATTAATAAATT+GGG + chr8_2:24994831-24994850 Msa1241430:intron 35.0%
GCTCTAATGTACTTGTTTAC+TGG + chr8_2:24994884-24994903 Msa1241430:intron 35.0%
TCGTCGAATTGAAAGTAAGA+CGG - chr8_2:24994964-24994983 None:intergenic 35.0%
AGATCTGAAGAGGTAAATGA+TGG - chr8_2:24995230-24995249 None:intergenic 35.0%
TCATTTACCTCTTCAGATCT+TGG + chr8_2:24995230-24995249 Msa1241430:CDS 35.0%
! TTCAGATCTTGGTGTGATAA+AGG + chr8_2:24995241-24995260 Msa1241430:CDS 35.0%
! TCAGATCTTGGTGTGATAAA+GGG + chr8_2:24995242-24995261 Msa1241430:CDS 35.0%
AATAAGCGGTCTACACAAAA+TGG - chr8_2:24995272-24995291 None:intergenic 35.0%
! TTAACAGGCTAGCCATTAAT+AGG + chr8_2:24995303-24995322 Msa1241430:intron 35.0%
! TAACAGGCTAGCCATTAATA+GGG + chr8_2:24995304-24995323 Msa1241430:intron 35.0%
!! CATTAATAGGGGTGTTTGAA+GGG + chr8_2:24995316-24995335 Msa1241430:intron 35.0%
!! ATTAATAGGGGTGTTTGAAG+GGG + chr8_2:24995317-24995336 Msa1241430:intron 35.0%
CAACAATTAAGAAGGGACAA+AGG - chr8_2:24995358-24995377 None:intergenic 35.0%
!! CAACAATTTTGGCAACTTGT+TGG - chr8_2:24995625-24995644 None:intergenic 35.0%
!! ATCCTGCTTTAAAGTGAACT+TGG + chr8_2:24995658-24995677 Msa1241430:intron 35.0%
!! TCCTGCTTTAAAGTGAACTT+GGG + chr8_2:24995659-24995678 Msa1241430:intron 35.0%
! TTGGGAGATAGTGTTTGTTT+TGG + chr8_2:24995677-24995696 Msa1241430:intron 35.0%
!!! ATAGTGTTTGTTTTGGTCAG+AGG + chr8_2:24995684-24995703 Msa1241430:intron 35.0%
!!! TTTTTTAGTTCCCACAGTTG+AGG + chr8_2:24996085-24996104 Msa1241430:intron 35.0%
!!! TTTTTAGTTCCCACAGTTGA+GGG + chr8_2:24996086-24996105 Msa1241430:intron 35.0%
AAATTATAGAGCTCTTTGGG+GGG - chr8_2:24996139-24996158 None:intergenic 35.0%
GAAATTATAGAGCTCTTTGG+GGG - chr8_2:24996140-24996159 None:intergenic 35.0%
GGAAATTATAGAGCTCTTTG+GGG - chr8_2:24996141-24996160 None:intergenic 35.0%
GTGGAAATTATAGAGCTCTT+TGG - chr8_2:24996143-24996162 None:intergenic 35.0%
!! TAACTATGGTGATAACGGTT+AGG - chr8_2:24996233-24996252 None:intergenic 35.0%
TTGCTGTACATTTGAACTTC+AGG + chr8_2:24996320-24996339 Msa1241430:intron 35.0%
AAAAACAGAACAGCAGAATG+TGG - chr8_2:24996358-24996377 None:intergenic 35.0%
TTGCTTAGAGATAATGCAAG+CGG + chr8_2:24996832-24996851 Msa1241430:intron 35.0%
AGAAATGGCAAAATAGGGTA+AGG + chr8_2:24996891-24996910 Msa1241430:intron 35.0%
AGCTATGTATTCTTGCGATT+AGG + chr8_2:24997080-24997099 Msa1241430:intron 35.0%
!!! TGTTGGTTTTTCATCACTGA+TGG + chr8_2:24997181-24997200 Msa1241430:intron 35.0%
CTTGAGAAGCAAGTTAAACT+TGG - chr8_2:24997243-24997262 None:intergenic 35.0%
!! CAAGTTTAACTTGCTTCTCA+AGG + chr8_2:24997241-24997260 Msa1241430:CDS 35.0%
ACAGAAAGAAGAGAAGTTCA+AGG + chr8_2:24997274-24997293 Msa1241430:CDS 35.0%
! TTGTTGACTAGGGATTACTA+TGG + chr8_2:24997628-24997647 Msa1241430:three_prime_UTR 35.0%
CTATGGATATAGCATGTGTT+AGG + chr8_2:24997645-24997664 Msa1241430:three_prime_UTR 35.0%
CATGTGTTAGGGAAAACTAT+TGG + chr8_2:24997657-24997676 Msa1241430:three_prime_UTR 35.0%
GACTAAGTTCATGGATGTAA+AGG + chr8_2:24997692-24997711 Msa1241430:three_prime_UTR 35.0%
CGGAGACAAAGCAATACATA+CGG + chr8_2:24993535-24993554 Msa1241430:five_prime_UTR 40.0%
TGGTTTAACGCAGTAGTGTT+GGG - chr8_2:24993578-24993597 None:intergenic 40.0%
TTGGTTTAACGCAGTAGTGT+TGG - chr8_2:24993579-24993598 None:intergenic 40.0%
! GGAATGAAAGAAGTGTGCTT+TGG - chr8_2:24993598-24993617 None:intergenic 40.0%
CTAGAACAGTGAATATAGCG+AGG - chr8_2:24993688-24993707 None:intergenic 40.0%
! TCGAGAGAATTTTCAGAGCT+GGG - chr8_2:24993785-24993804 None:intergenic 40.0%
! TTCGAGAGAATTTTCAGAGC+TGG - chr8_2:24993786-24993805 None:intergenic 40.0%
TGATCAACACAACACCAAAC+AGG + chr8_2:24993832-24993851 Msa1241430:CDS 40.0%
TAAACACTAGTGGGACTGTT+TGG - chr8_2:24994229-24994248 None:intergenic 40.0%
ACATTGTGCTTATGCTTGCT+TGG + chr8_2:24994462-24994481 Msa1241430:intron 40.0%
CATTGTGCTTATGCTTGCTT+GGG + chr8_2:24994463-24994482 Msa1241430:intron 40.0%
AGATCATAGCCTCTTCAAGT+GGG + chr8_2:24994486-24994505 Msa1241430:intron 40.0%
AAACCAAATCCCACTTGAAG+AGG - chr8_2:24994498-24994517 None:intergenic 40.0%
TTGATGGGAAAATCAACCGT+TGG + chr8_2:24994565-24994584 Msa1241430:intron 40.0%
! GCAGTATCTGGTTTGATTCT+TGG + chr8_2:24994682-24994701 Msa1241430:intron 40.0%
GTACAATAATGTTCGGAACC+TGG + chr8_2:24994751-24994770 Msa1241430:intron 40.0%
GTTTGATAAAAAACAGGGGG+GGG + chr8_2:24994813-24994832 Msa1241430:intron 40.0%
TTTGATAAAAAACAGGGGGG+GGG + chr8_2:24994814-24994833 Msa1241430:intron 40.0%
GGGGGGGGATATTAATAAAT+TGG + chr8_2:24994830-24994849 Msa1241430:intron 40.0%
CGTCGAATTGAAAGTAAGAC+GGG - chr8_2:24994963-24994982 None:intergenic 40.0%
! GGTGTTGTAGAATTCACTTC+TGG + chr8_2:24995028-24995047 Msa1241430:intron 40.0%
AGATCTATGAAGCCAAAGTC+TGG + chr8_2:24995141-24995160 Msa1241430:CDS 40.0%
GATCTATGAAGCCAAAGTCT+GGG + chr8_2:24995142-24995161 Msa1241430:CDS 40.0%
TATCACACCAAGATCTGAAG+AGG - chr8_2:24995240-24995259 None:intergenic 40.0%
! AACAGGCTAGCCATTAATAG+GGG + chr8_2:24995305-24995324 Msa1241430:intron 40.0%
CCTTCAAACACCCCTATTAA+TGG - chr8_2:24995318-24995337 None:intergenic 40.0%
!! CCATTAATAGGGGTGTTTGA+AGG + chr8_2:24995315-24995334 Msa1241430:intron 40.0%
!! ATGATGACGCGCAACAATTT+TGG - chr8_2:24995636-24995655 None:intergenic 40.0%
!! TCCCAAGTTCACTTTAAAGC+AGG - chr8_2:24995663-24995682 None:intergenic 40.0%
!!! TGTTTGTTTTGGTCAGAGGT+TGG + chr8_2:24995688-24995707 Msa1241430:intron 40.0%
! AGCGAGGCCTGAATTTTATT+GGG + chr8_2:24995801-24995820 Msa1241430:intron 40.0%
TTTGGAGGGATGAGATTAGA+GGG + chr8_2:24995913-24995932 Msa1241430:intron 40.0%
! TTGTATCGGAGGAAGGTTTT+GGG - chr8_2:24996065-24996084 None:intergenic 40.0%
! ATTGTATCGGAGGAAGGTTT+TGG - chr8_2:24996066-24996085 None:intergenic 40.0%
!!! TTTTAGTTCCCACAGTTGAG+GGG + chr8_2:24996087-24996106 Msa1241430:intron 40.0%
ATAACGGTTAGGCTCTGTTT+GGG - chr8_2:24996222-24996241 None:intergenic 40.0%
ATGCCACGTGATTGAATTGT+TGG + chr8_2:24996558-24996577 Msa1241430:intron 40.0%
CAACCAACAATTCAATCACG+TGG - chr8_2:24996564-24996583 None:intergenic 40.0%
ACATGCTCACGCAGTAAAAA+TGG - chr8_2:24996779-24996798 None:intergenic 40.0%
TTAGAGATAATGCAAGCGGA+TGG + chr8_2:24996836-24996855 Msa1241430:intron 40.0%
TAGAGATAATGCAAGCGGAT+GGG + chr8_2:24996837-24996856 Msa1241430:intron 40.0%
GGATGTCTAAATTGTTGTGC+AGG + chr8_2:24997202-24997221 Msa1241430:intron 40.0%
AGAAGAGAAGTTCAAGGTAG+AGG + chr8_2:24997280-24997299 Msa1241430:CDS 40.0%
CTGCTTCCATCTGATTAAGA+TGG - chr8_2:24997331-24997350 None:intergenic 40.0%
CCAAGCTTAATAGTAGGACT+AGG - chr8_2:24997360-24997379 None:intergenic 40.0%
CCTAGTCCTACTATTAAGCT+TGG + chr8_2:24997357-24997376 Msa1241430:exon 40.0%
CTGTGACCAAGCTTAATAGT+AGG - chr8_2:24997366-24997385 None:intergenic 40.0%
CTTGGTCACAGTAGCATTAT+AGG + chr8_2:24997375-24997394 Msa1241430:three_prime_UTR 40.0%
TCAGTGCTTTCTTTATGCCT+TGG + chr8_2:24997513-24997532 Msa1241430:three_prime_UTR 40.0%
GCAAAACAATAACTAGGCCA+AGG - chr8_2:24997533-24997552 None:intergenic 40.0%
TGTTAGGGAAAACTATTGGG+AGG + chr8_2:24997661-24997680 Msa1241430:three_prime_UTR 40.0%
GGCTTCGAAACTAAGCAACA+CGG + chr8_2:24993515-24993534 Msa1241430:five_prime_UTR 45.0%
TAAGAAGGGAAGAAGCGAAG+TGG - chr8_2:24993654-24993673 None:intergenic 45.0%
ATCGAAATCGGAACAGTGAC+CGG - chr8_2:24993717-24993736 None:intergenic 45.0%
CATTTGCGCGTGATCGAAAT+CGG - chr8_2:24993729-24993748 None:intergenic 45.0%
! GAGAGAATTTTCAGAGCTGG+GGG - chr8_2:24993783-24993802 None:intergenic 45.0%
! CGAGAGAATTTTCAGAGCTG+GGG - chr8_2:24993784-24993803 None:intergenic 45.0%
TGTGATGCTTGAGGTCAGTT+TGG - chr8_2:24994281-24994300 None:intergenic 45.0%
ATAGACACGTGTGATGCTTG+AGG - chr8_2:24994290-24994309 None:intergenic 45.0%
GAGATCATAGCCTCTTCAAG+TGG + chr8_2:24994485-24994504 Msa1241430:intron 45.0%
TAGCCTCTTCAAGTGGGATT+TGG + chr8_2:24994492-24994511 Msa1241430:intron 45.0%
CAAAAGTAGGCAGTCTTAGC+AGG - chr8_2:24994638-24994657 None:intergenic 45.0%
! CGGAACCTGGTTGTATTGAT+TGG + chr8_2:24994764-24994783 Msa1241430:intron 45.0%
TTGATAAAAAACAGGGGGGG+GGG + chr8_2:24994815-24994834 Msa1241430:intron 45.0%
!! ATTCACTTCTGGAGTTCGCA+AGG + chr8_2:24995039-24995058 Msa1241430:CDS 45.0%
!! TTCACTTCTGGAGTTCGCAA+GGG + chr8_2:24995040-24995059 Msa1241430:CDS 45.0%
ACTGCATCATCTTACTCTCG+AGG + chr8_2:24995097-24995116 Msa1241430:CDS 45.0%
TACTCTCGAGGCTATAGATG+CGG + chr8_2:24995109-24995128 Msa1241430:CDS 45.0%
CTTACTGAGTTCAAGCATGC+TGG + chr8_2:24995191-24995210 Msa1241430:CDS 45.0%
! GAGCGAGGCCTGAATTTTAT+TGG + chr8_2:24995800-24995819 Msa1241430:intron 45.0%
!! AGACACTCTAAGGCTCTGTT+TGG + chr8_2:24995862-24995881 Msa1241430:intron 45.0%
!! GACACTCTAAGGCTCTGTTT+GGG + chr8_2:24995863-24995882 Msa1241430:intron 45.0%
GCTCTGTTTGGGAGTTTGTA+GGG + chr8_2:24995874-24995893 Msa1241430:intron 45.0%
CTCTGTTTGGGAGTTTGTAG+GGG + chr8_2:24995875-24995894 Msa1241430:intron 45.0%
! CTTTGGAGGGATGAGATTAG+AGG + chr8_2:24995912-24995931 Msa1241430:intron 45.0%
! TTTAGTTCCCACAGTTGAGG+GGG + chr8_2:24996088-24996107 Msa1241430:intron 45.0%
ACAAAATCCCCCTCAACTGT+GGG - chr8_2:24996098-24996117 None:intergenic 45.0%
AACAAAATCCCCCTCAACTG+TGG - chr8_2:24996099-24996118 None:intergenic 45.0%
TTAGGCTCTGTTTGGGAGTT+TGG - chr8_2:24996215-24996234 None:intergenic 45.0%
! GATAACGGTTAGGCTCTGTT+TGG - chr8_2:24996223-24996242 None:intergenic 45.0%
TTGCTGCATCCTGAACTTGA+GGG - chr8_2:24996429-24996448 None:intergenic 45.0%
TTTGCTGCATCCTGAACTTG+AGG - chr8_2:24996430-24996449 None:intergenic 45.0%
! CTCATAGGGCACTAGTGAAT+TGG - chr8_2:24996482-24996501 None:intergenic 45.0%
GAAACCTCATGGAGCTCATA+GGG - chr8_2:24996496-24996515 None:intergenic 45.0%
AGAAACCTCATGGAGCTCAT+AGG - chr8_2:24996497-24996516 None:intergenic 45.0%
AGAGATAATGCAAGCGGATG+GGG + chr8_2:24996838-24996857 Msa1241430:intron 45.0%
GGACACTGTTCCCAAAGATA+TGG + chr8_2:24997101-24997120 Msa1241430:intron 45.0%
ATTTGGGCTGCTAAGCTTGT+TGG + chr8_2:24997164-24997183 Msa1241430:intron 45.0%
ACTTGCTTCTCAAGGTCAAG+CGG + chr8_2:24997249-24997268 Msa1241430:CDS 45.0%
GAGGTGCACAAGAATAACGA+AGG + chr8_2:24997299-24997318 Msa1241430:CDS 45.0%
!! GCTTGTACCGACTAAGTTCA+TGG + chr8_2:24997683-24997702 Msa1241430:three_prime_UTR 45.0%
!!! TAATTTTTTGTTTATATTTT+CGG + chr8_2:24996584-24996603 Msa1241430:intron 5.0%
GCGAAGTGGTTGCTCTCATT+AGG - chr8_2:24993640-24993659 None:intergenic 50.0%
CGATTTCGATCACGCGCAAA+TGG + chr8_2:24993727-24993746 Msa1241430:CDS 50.0%
CTAGTGGGACTGTTTGGAAG+AGG - chr8_2:24994223-24994242 None:intergenic 50.0%
ACTCTCGAGGCTATAGATGC+GGG + chr8_2:24995110-24995129 Msa1241430:CDS 50.0%
! CCAGGGTTTTACCCAGACTT+TGG - chr8_2:24995156-24995175 None:intergenic 50.0%
CCAAAGTCTGGGTAAAACCC+TGG + chr8_2:24995153-24995172 Msa1241430:CDS 50.0%
GAGTTCAAGCATGCTGGTGA+TGG + chr8_2:24995197-24995216 Msa1241430:CDS 50.0%
GAAAAAGGCTTGTAGGAGCG+AGG + chr8_2:24995785-24995804 Msa1241430:intron 50.0%
GGCTCTGTTTGGGAGTTTGT+AGG + chr8_2:24995873-24995892 Msa1241430:intron 50.0%
TGTTTGGGAGTTTGTAGGGG+AGG + chr8_2:24995878-24995897 Msa1241430:intron 50.0%
GTTTGGGAGTTTGTAGGGGA+GGG + chr8_2:24995879-24995898 Msa1241430:intron 50.0%
TTTGGGAGTTTGTAGGGGAG+GGG + chr8_2:24995880-24995899 Msa1241430:intron 50.0%
CTCTGTTTGGGAGTTTGGAG+GGG - chr8_2:24996210-24996229 None:intergenic 50.0%
GCTCTGTTTGGGAGTTTGGA+GGG - chr8_2:24996211-24996230 None:intergenic 50.0%
TTATCAGATGGCCACAAGCC+AGG + chr8_2:24996379-24996398 Msa1241430:intron 50.0%
TGAACTTGAGGGTCATGTGC+TGG - chr8_2:24996418-24996437 None:intergenic 50.0%
AGCACATGACCCTCAAGTTC+AGG + chr8_2:24996417-24996436 Msa1241430:CDS 50.0%
CTGTTAAGACCATCCAGCAG+AGG + chr8_2:24996455-24996474 Msa1241430:CDS 50.0%
TGAATTGGACCTCTGCTGGA+TGG - chr8_2:24996467-24996486 None:intergenic 50.0%
CTAGTGAATTGGACCTCTGC+TGG - chr8_2:24996471-24996490 None:intergenic 50.0%
CCTTCGCATCAGAAACCTCA+TGG - chr8_2:24996507-24996526 None:intergenic 50.0%
CCATGAGGTTTCTGATGCGA+AGG + chr8_2:24996504-24996523 Msa1241430:CDS 50.0%
GAAACAGACTCGTGCATAGC+TGG + chr8_2:24996915-24996934 Msa1241430:intron 50.0%
CTTGCTTCTCAAGGTCAAGC+GGG + chr8_2:24997250-24997269 Msa1241430:CDS 50.0%
TTGCTTCTCAAGGTCAAGCG+GGG + chr8_2:24997251-24997270 Msa1241430:CDS 50.0%
AGTAGCATTATAGGCCTGCG+TGG + chr8_2:24997384-24997403 Msa1241430:three_prime_UTR 50.0%
! TGCAAATTTAGGGTCCACGC+AGG - chr8_2:24997401-24997420 None:intergenic 50.0%
GGGAATCGTGAATACCTCCG+GGG - chr8_2:24993763-24993782 None:intergenic 55.0%
GGGGAATCGTGAATACCTCC+GGG - chr8_2:24993764-24993783 None:intergenic 55.0%
GGGGGAATCGTGAATACCTC+CGG - chr8_2:24993765-24993784 None:intergenic 55.0%
!! ACTTCTGGAGTTCGCAAGGG+TGG + chr8_2:24995043-24995062 Msa1241430:CDS 55.0%
TCGCAAGGGTGGTGAAAGCA+CGG + chr8_2:24995054-24995073 Msa1241430:CDS 55.0%
GAGTTTGGAGGGGAAGAGAG+GGG - chr8_2:24996200-24996219 None:intergenic 55.0%
GGAGTTTGGAGGGGAAGAGA+GGG - chr8_2:24996201-24996220 None:intergenic 55.0%
GGCTCTGTTTGGGAGTTTGG+AGG - chr8_2:24996212-24996231 None:intergenic 55.0%
AGTGCCCTATGAGCTCCATG+AGG + chr8_2:24996489-24996508 Msa1241430:CDS 55.0%
GGTTTCTGATGCGAAGGCTG+AGG + chr8_2:24996510-24996529 Msa1241430:CDS 55.0%
CAAATGGCCACTCCACTCCC+CGG + chr8_2:24993743-24993762 Msa1241430:CDS 60.0%
AATACCTCCGGGGAGTGGAG+TGG - chr8_2:24993753-24993772 None:intergenic 60.0%
TCGTGAATACCTCCGGGGAG+TGG - chr8_2:24993758-24993777 None:intergenic 60.0%
! CGCAAGGGTGGTGAAAGCAC+GGG + chr8_2:24995055-24995074 Msa1241430:CDS 60.0%
! GGTGGTGAAAGCACGGGAAC+AGG + chr8_2:24995061-24995080 Msa1241430:CDS 60.0%
GCACGGGAACAGGTTGTTGC+TGG + chr8_2:24995071-24995090 Msa1241430:CDS 60.0%
GGAGTTTGTAGGGGAGGGGA+GGG + chr8_2:24995884-24995903 Msa1241430:intron 60.0%
GAGTTTGTAGGGGAGGGGAG+GGG + chr8_2:24995885-24995904 Msa1241430:intron 60.0%
GAAGAGAGGGGAGGGCTAGA+AGG - chr8_2:24996188-24996207 None:intergenic 60.0%
TTGGAGGGGAAGAGAGGGGA+GGG - chr8_2:24996196-24996215 None:intergenic 60.0%
TTTGGAGGGGAAGAGAGGGG+AGG - chr8_2:24996197-24996216 None:intergenic 60.0%
GGGAGTTTGGAGGGGAAGAG+AGG - chr8_2:24996202-24996221 None:intergenic 60.0%
CAGATGGCCACAAGCCAGGT+TGG + chr8_2:24996383-24996402 Msa1241430:intron 60.0%
! CCACAAGCCAGGTTGGCAGT+CGG + chr8_2:24996390-24996409 Msa1241430:CDS 60.0%
GGGAGTTTGTAGGGGAGGGG+AGG + chr8_2:24995883-24995902 Msa1241430:intron 65.0%
TTTGTAGGGGAGGGGAGGGG+AGG + chr8_2:24995888-24995907 Msa1241430:intron 65.0%
TTGTAGGGGAGGGGAGGGGA+GGG + chr8_2:24995889-24995908 Msa1241430:intron 65.0%
! CCGACTGCCAACCTGGCTTG+TGG - chr8_2:24996393-24996412 None:intergenic 65.0%
GCTGGAACCGACTGCCAACC+TGG - chr8_2:24996400-24996419 None:intergenic 65.0%
ATGGCCACTCCACTCCCCGG+AGG + chr8_2:24993746-24993765 Msa1241430:CDS 70.0%
! AGGGGAGGGGAGGGCTTTGG+AGG + chr8_2:24995898-24995917 Msa1241430:intron 70.0%
!! GGGGAGGGGAGGGCTTTGGA+GGG + chr8_2:24995899-24995918 Msa1241430:intron 70.0%
GGGAGGGGAGGGGAGGGCTT+TGG + chr8_2:24995895-24995914 Msa1241430:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 24993513 24997801 24993513 ID=Msa1241430;Name=Msa1241430
chr8_2 mRNA 24993513 24997801 24993513 ID=Msa1241430-mRNA-1;Parent=Msa1241430;Name=Msa1241430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=128|1|1|1|1|1|4|440|240
chr8_2 exon 24993513 24993853 24993513 ID=Msa1241430-mRNA-1:exon:8825;Parent=Msa1241430-mRNA-1
chr8_2 exon 24995038 24995263 24995038 ID=Msa1241430-mRNA-1:exon:8826;Parent=Msa1241430-mRNA-1
chr8_2 exon 24996386 24996531 24996386 ID=Msa1241430-mRNA-1:exon:8827;Parent=Msa1241430-mRNA-1
chr8_2 exon 24997224 24997801 24997224 ID=Msa1241430-mRNA-1:exon:8828;Parent=Msa1241430-mRNA-1
chr8_2 five_prime_UTR 24993513 24993640 24993513 ID=Msa1241430-mRNA-1:five_prime_utr;Parent=Msa1241430-mRNA-1
chr8_2 CDS 24993641 24993853 24993641 ID=Msa1241430-mRNA-1:cds;Parent=Msa1241430-mRNA-1
chr8_2 CDS 24995038 24995263 24995038 ID=Msa1241430-mRNA-1:cds;Parent=Msa1241430-mRNA-1
chr8_2 CDS 24996386 24996531 24996386 ID=Msa1241430-mRNA-1:cds;Parent=Msa1241430-mRNA-1
chr8_2 CDS 24997224 24997361 24997224 ID=Msa1241430-mRNA-1:cds;Parent=Msa1241430-mRNA-1
chr8_2 three_prime_UTR 24997362 24997801 24997362 ID=Msa1241430-mRNA-1:three_prime_utr;Parent=Msa1241430-mRNA-1
Gene Sequence

>Msa1241430

ATGAGAGCAACCACTTCGCTTCTTCCCTTCTTATTCTTCTTCTTCCTCGCTATATTCACTGTTCTAGAATCTTCCGGTCACTGTTCCGATTTCGATCACGCGCAAATGGCCACTCCACTCCCCGGAGGTATTCACGATTCCCCCAGCTCTGAAAATTCTCTCGAAATTGAATCTCTTGCTCGATTCGCTGTTGATCAACACAACACCAAACAGAATTCACTTCTGGAGTTCGCAAGGGTGGTGAAAGCACGGGAACAGGTTGTTGCTGGTACACTGCATCATCTTACTCTCGAGGCTATAGATGCGGGTGAGAAGAAGATCTATGAAGCCAAAGTCTGGGTAAAACCCTGGATGAACTTTAAAGAACTTACTGAGTTCAAGCATGCTGGTGATGGTCATGCACCATCATTTACCTCTTCAGATCTTGGTGTGATAAAGGATGGCCACAAGCCAGGTTGGCAGTCGGTTCCAGCACATGACCCTCAAGTTCAGGATGCAGCAAATCATGCTGTTAAGACCATCCAGCAGAGGTCCAATTCACTAGTGCCCTATGAGCTCCATGAGGTTTCTGATGCGAAGGCTGAGGTCATCGATGATACTGCCAAGTTTAACTTGCTTCTCAAGGTCAAGCGGGGACAGAAAGAAGAGAAGTTCAAGGTAGAGGTGCACAAGAATAACGAAGGTAACTTCCATCTTAATCAGATGGAAGCAGATAATTCCTAG
Protein sequence

>Msa1241430

MRATTSLLPFLFFFFLAIFTVLESSGHCSDFDHAQMATPLPGGIHDSPSSENSLEIESLARFAVDQHNTKQNSLLEFARVVKAREQVVAGTLHHLTLEAIDAGEKKIYEAKVWVKPWMNFKELTEFKHAGDGHAPSFTSSDLGVIKDGHKPGWQSVPAHDPQVQDAANHAVKTIQQRSNSLVPYELHEVSDAKAEVIDDTAKFNLLLKVKRGQKEEKFKVEVHKNNEGNFHLNQMEADNS*