AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1282710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282710 MtrunA17_Chr8g0354141 95.413 218 9 1 23 240 25 241 1.74e-154 429
Msa1282710 MtrunA17_Chr3g0093771 60.606 99 37 1 36 134 25 121 2.49e-36 124
Msa1282710 MtrunA17_Chr5g0441261 51.000 100 48 1 42 140 5 104 1.38e-30 109
Msa1282710 MtrunA17_Chr3g0097041 48.515 101 48 3 42 141 63 160 3.91e-23 92.0
Msa1282710 MtrunA17_Chr2g0290101 35.897 117 65 3 11 127 8 114 1.09e-13 65.5
Msa1282710 MtrunA17_Chr4g0076001 40.230 87 49 2 41 126 28 112 3.74e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1282710 AT3G12490.2 62.500 232 82 2 5 236 4 230 3.29e-98 286
Msa1282710 AT3G12490.1 68.153 157 48 1 40 196 3 157 1.55e-72 218
Msa1282710 AT5G05110.1 55.497 191 80 2 42 231 46 232 3.57e-69 213
Msa1282710 AT2G40880.1 56.863 102 44 0 28 129 22 123 5.27e-38 129
Msa1282710 AT5G12140.1 49.485 97 49 0 35 131 4 100 1.61e-28 104
Msa1282710 AT5G47550.1 41.250 80 46 1 55 133 41 120 3.69e-13 64.7

Find 96 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTCACAGTAGCATTAT+AGG 0.244708 8_3:+23457624 Msa1282710:three_prime_UTR
TTCAGATCTTGGTGTGATAA+AGG 0.306420 8_3:+23455529 Msa1282710:CDS
TCATTTACCTCTTCAGATCT+TGG 0.349534 8_3:+23455518 Msa1282710:CDS
GGTGTTGTAGAATTCACTTC+TGG 0.352339 8_3:+23455316 Msa1282710:intron
AGATCTATGAAGCCAAAGTC+TGG 0.352484 8_3:+23455429 Msa1282710:CDS
CTATGGATATAGCATGTGTT+AGG 0.363855 8_3:+23457894 Msa1282710:three_prime_UTR
TTCACTGTTCTAGAATCTTC+CGG 0.371100 8_3:+23453886 Msa1282710:CDS
CTCATAGGGCACTAGTGAAT+TGG 0.373021 8_3:-23456735 None:intergenic
CATGTGTTAGGGAAAACTAT+TGG 0.389122 8_3:+23457906 Msa1282710:three_prime_UTR
GCACGGGAACAGGTTGTTAC+TGG 0.392392 8_3:+23455359 Msa1282710:CDS
TCAGTGCTTTCTTTATGCCT+TGG 0.393557 8_3:+23457762 Msa1282710:three_prime_UTR
GCGAAGTGGTTGCTCTCATT+AGG 0.398542 8_3:-23453828 None:intergenic
AGAAACCTCATGGAGCTCAT+AGG 0.403459 8_3:-23456750 None:intergenic
AACTAATGCAATTAAGATCA+TGG 0.406774 8_3:-23457835 None:intergenic
TGATGGTTTCATTTATATCA+AGG 0.413492 8_3:+23457808 Msa1282710:three_prime_UTR
GGTTTGTTTGTTACTTACTT+AGG 0.414843 8_3:-23453807 None:intergenic
TGGTTTAACGCAGTAGTGTT+GGG 0.425214 8_3:-23453766 None:intergenic
GGTGGTGAAAGCACGGGAAC+AGG 0.431902 8_3:+23455349 Msa1282710:CDS
CTGCTTCCATCTGATTAAGA+TGG 0.437286 8_3:-23457577 None:intergenic
GCTGGAACCGACTGCCAACC+TGG 0.439445 8_3:-23456653 None:intergenic
CTAGTGAATTGGACCTCTGC+TGG 0.439707 8_3:-23456724 None:intergenic
GGAATGAAAGAAGTGTGCTT+TGG 0.443561 8_3:-23453786 None:intergenic
AGCACGTGACCCTCAAGTTC+AGG 0.447338 8_3:+23456673 Msa1282710:CDS
CATTTGCGCGTGATCGAAAT+CGG 0.448077 8_3:-23453917 None:intergenic
ATGTGTTAGGGAAAACTATT+GGG 0.448490 8_3:+23457907 Msa1282710:three_prime_UTR
ATCGAAATCGGAACAGTGAC+CGG 0.449810 8_3:-23453905 None:intergenic
TCAGATCTTGGTGTGATAAA+GGG 0.457739 8_3:+23455530 Msa1282710:CDS
CCTAGTCCTACTATTAAGCT+TGG 0.463961 8_3:+23457606 Msa1282710:exon
TTGGTTTAACGCAGTAGTGT+TGG 0.466467 8_3:-23453767 None:intergenic
TTGTTGACTAGGGATTACTA+TGG 0.467786 8_3:+23457877 Msa1282710:three_prime_UTR
GCTTGTACCGACTAAGTTCA+TGG 0.470198 8_3:+23457932 Msa1282710:three_prime_UTR
TTATCAGATGGCCACAAGCC+AGG 0.483576 8_3:+23456635 Msa1282710:intron
CTTGAGAAGCAAGTTAAACT+TGG 0.487025 8_3:-23457489 None:intergenic
CTTGCTTCTCAAGGTCAAGC+GGG 0.490732 8_3:+23457499 Msa1282710:CDS
AAGTTCTTTAAAGTTCATCC+AGG 0.491331 8_3:-23455459 None:intergenic
GAGGAAGAAGAAGAATAAGA+AGG 0.495659 8_3:-23453857 None:intergenic
TGATCAACACAACACCAAAC+AGG 0.497271 8_3:+23454023 Msa1282710:CDS
GAAACCTCATGGAGCTCATA+GGG 0.500032 8_3:-23456749 None:intergenic
AGGAAGAAGAAGAATAAGAA+GGG 0.501335 8_3:-23453856 None:intergenic
TGAACTTGAGGGTCACGTGC+TGG 0.506672 8_3:-23456671 None:intergenic
TGAAAATGTGTTTGTTGACT+AGG 0.514834 8_3:+23457866 Msa1282710:three_prime_UTR
CAAGTTTAACTTGCTTCTCA+AGG 0.515944 8_3:+23457490 Msa1282710:CDS
CTGTGACCAAGCTTAATAGT+AGG 0.519301 8_3:-23457612 None:intergenic
TCGTGAATACCTCCGGGGAG+TGG 0.522213 8_3:-23453946 None:intergenic
GACTAAGTTCATGGATGTAA+AGG 0.524728 8_3:+23457941 Msa1282710:three_prime_UTR
TAACTTCCATCTTAATCAGA+TGG 0.525361 8_3:+23457571 Msa1282710:CDS
ACTAATGCAATTAAGATCAT+GGG 0.525700 8_3:-23457834 None:intergenic
AGAAGAGAAGTTCAAGGTAG+AGG 0.530018 8_3:+23457529 Msa1282710:CDS
CCAAGCTTAATAGTAGGACT+AGG 0.530391 8_3:-23457606 None:intergenic
TTGCTGCATCCTGAACTTGA+GGG 0.533051 8_3:-23456682 None:intergenic
TATGGATATAGCATGTGTTA+GGG 0.542780 8_3:+23457895 Msa1282710:three_prime_UTR
CTTACTGAGTTCAAGCATGC+TGG 0.544063 8_3:+23455479 Msa1282710:CDS
GGGGAATCGTGAATACCTCC+GGG 0.546261 8_3:-23453952 None:intergenic
ATTCACTTCTGGAGTTCGCA+AGG 0.554851 8_3:+23455327 Msa1282710:CDS
ACAGAAAGAAGAGAAGTTCA+AGG 0.554921 8_3:+23457523 Msa1282710:CDS
TTTGCTGCATCCTGAACTTG+AGG 0.555812 8_3:-23456683 None:intergenic
GAAAATGTGTTTGTTGACTA+GGG 0.556471 8_3:+23457867 Msa1282710:three_prime_UTR
TCGCAAGGGTGGTGAAAGCA+CGG 0.557056 8_3:+23455342 Msa1282710:CDS
CCATGAGGTTTCTGATGCGA+AGG 0.562730 8_3:+23456760 Msa1282710:CDS
CAGATGGCCACAAGCCAGGT+TGG 0.562783 8_3:+23456639 Msa1282710:intron
CAAATGGCCACTCCACTCCC+CGG 0.566217 8_3:+23453934 Msa1282710:CDS
GATCTATGAAGCCAAAGTCT+GGG 0.570925 8_3:+23455430 Msa1282710:CDS
ACTCTCGAGGCTATAGATGC+GGG 0.573383 8_3:+23455398 Msa1282710:CDS
TGAATTGGACCTCTGCTGGA+TGG 0.574153 8_3:-23456720 None:intergenic
TTTACATCCATGAACTTAGT+CGG 0.574726 8_3:-23457939 None:intergenic
TACTCTCGAGGCTATAGATG+CGG 0.578669 8_3:+23455397 Msa1282710:CDS
CCTTCGCATCAGAAACCTCA+TGG 0.585550 8_3:-23456760 None:intergenic
TAAGTTGCAAAACAATAACT+AGG 0.585551 8_3:-23457785 None:intergenic
AGATCTGAAGAGGTAAATGA+TGG 0.591467 8_3:-23455515 None:intergenic
CGCAAGGGTGGTGAAAGCAC+GGG 0.592671 8_3:+23455343 Msa1282710:CDS
TATCACACCAAGATCTGAAG+AGG 0.592973 8_3:-23455525 None:intergenic
ACTTCTGGAGTTCGCAAGGG+TGG 0.593021 8_3:+23455331 Msa1282710:CDS
CCAAAGTCTGGGTAAAACCC+TGG 0.593767 8_3:+23455441 Msa1282710:CDS
CCGACTGCCAACCTGGCTTG+TGG 0.593906 8_3:-23456646 None:intergenic
GGTTTCTGATGCGAAGGCTG+AGG 0.594893 8_3:+23456766 Msa1282710:CDS
GAGTTCAAGCATGCTGGTGA+TGG 0.594970 8_3:+23455485 Msa1282710:CDS
AATACCTCCGGGGAGTGGAG+TGG 0.595891 8_3:-23453941 None:intergenic
AGTTCTTTAAAGTTCATCCA+GGG 0.602713 8_3:-23455458 None:intergenic
TTCACTTCTGGAGTTCGCAA+GGG 0.604248 8_3:+23455328 Msa1282710:CDS
TAAGAAGGGAAGAAGCGAAG+TGG 0.605131 8_3:-23453842 None:intergenic
ACTTGCTTCTCAAGGTCAAG+CGG 0.606587 8_3:+23457498 Msa1282710:CDS
GCAAAACAATAACTAGGCCA+AGG 0.613518 8_3:-23457779 None:intergenic
CGGAGACAAAGCAATACATA+CGG 0.617508 8_3:+23453726 Msa1282710:five_prime_UTR
TGCAAATTTAGGGTCCACGC+AGG 0.619749 8_3:-23457647 None:intergenic
CCACAAGCCAGGTTGGCAGT+CGG 0.633993 8_3:+23456646 Msa1282710:CDS
TGTTAGGGAAAACTATTGGG+AGG 0.657890 8_3:+23457910 Msa1282710:three_prime_UTR
CTGTTAAGACCATCCAGCAG+AGG 0.662004 8_3:+23456711 Msa1282710:CDS
TTGCTTCTCAAGGTCAAGCG+GGG 0.670149 8_3:+23457500 Msa1282710:CDS
AGTAGCATTATAGGCCTGCG+TGG 0.681871 8_3:+23457633 Msa1282710:three_prime_UTR
CTAGAACAGTGAATATAGCG+AGG 0.693332 8_3:-23453876 None:intergenic
ACTGCATCATCTTACTCTCG+AGG 0.693606 8_3:+23455385 Msa1282710:CDS
GAGGTGCACAAGAATAACGA+AGG 0.697526 8_3:+23457548 Msa1282710:CDS
GGCTTCGAAACTAAGCAACA+CGG 0.724262 8_3:+23453706 Msa1282710:five_prime_UTR
AGTGCCCTATGAGCTCCATG+AGG 0.734165 8_3:+23456745 Msa1282710:CDS
ATGGCCACTCCACTCCCCGG+AGG 0.738502 8_3:+23453937 Msa1282710:CDS
GGGAATCGTGAATACCTCCG+GGG 0.776720 8_3:-23453951 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACGAAATATAAAAATA+AGG + chr8_3:23454391-23454410 Msa1282710:intron 10.0%
!! TAATAATAAAAGTGAAAATT+AGG + chr8_3:23456925-23456944 Msa1282710:intron 10.0%
!! AATAATAAAAGTGAAAATTA+GGG + chr8_3:23456926-23456945 Msa1282710:intron 10.0%
!!! TAATTTGTAAATTCTTACTA+AGG + chr8_3:23454288-23454307 Msa1282710:intron 15.0%
!! AAAAAATCAACAATTAAGAA+GGG - chr8_3:23455653-23455672 None:intergenic 15.0%
!! TAAAAAATCAACAATTAAGA+AGG - chr8_3:23455654-23455673 None:intergenic 15.0%
!! GTAAAATAATTGATAAAGTT+AGG - chr8_3:23455754-23455773 None:intergenic 15.0%
!! ATAAAATAACAGAAACTATA+AGG - chr8_3:23456121-23456140 None:intergenic 15.0%
!!! AAATTTTTCAAATTTTCTGA+GGG + chr8_3:23456234-23456253 Msa1282710:intron 15.0%
!!! TTTTATCAGTTAAAATTGTT+TGG + chr8_3:23457201-23457220 Msa1282710:intron 15.0%
!!! ATATAAAAAGTGCAAATTTA+GGG - chr8_3:23457660-23457679 None:intergenic 15.0%
!!! TATATAAAAAGTGCAAATTT+AGG - chr8_3:23457661-23457680 None:intergenic 15.0%
!!! AAATTTGCACTTTTTATATA+TGG + chr8_3:23457661-23457680 Msa1282710:three_prime_UTR 15.0%
!!! AATTTGCACTTTTTATATAT+GGG + chr8_3:23457662-23457681 Msa1282710:three_prime_UTR 15.0%
!!! TTTTTAGACATATATAACAA+GGG - chr8_3:23457736-23457755 None:intergenic 15.0%
!!! TTTTTTAGACATATATAACA+AGG - chr8_3:23457737-23457756 None:intergenic 15.0%
!! AAATAAAAAGAATACCTGTT+TGG - chr8_3:23454040-23454059 None:intergenic 20.0%
!! ATTGTATGTGGTTATAATAA+AGG + chr8_3:23454127-23454146 Msa1282710:intron 20.0%
!! TTCATGCATAATCATTTATA+TGG - chr8_3:23454188-23454207 None:intergenic 20.0%
!! TATTATTTATAAGCTTGTCA+AGG - chr8_3:23454351-23454370 None:intergenic 20.0%
!!! TATATTTTTTACAACACCAA+CGG - chr8_3:23454874-23454893 None:intergenic 20.0%
!! TCTATGAAATTAACAAAAGT+AGG - chr8_3:23454941-23454960 None:intergenic 20.0%
!! CATTTAAGTACAATAATGTT+CGG + chr8_3:23455034-23455053 Msa1282710:intron 20.0%
!!! GCTGATATTTTTTATTTTTG+AGG + chr8_3:23455198-23455217 Msa1282710:intron 20.0%
!! TAATCATTACAAGAAATAAG+CGG - chr8_3:23455574-23455593 None:intergenic 20.0%
!! TATTTCTTGTAATGATTAAC+AGG + chr8_3:23455576-23455595 Msa1282710:intron 20.0%
!!! GAAATTTTTCAAATTTTCTG+AGG + chr8_3:23456233-23456252 Msa1282710:intron 20.0%
!! AGTATTATAACATCATAGAT+TGG + chr8_3:23456313-23456332 Msa1282710:intron 20.0%
!!! TAGAAAAAATGTCATTTAGA+AGG + chr8_3:23456866-23456885 Msa1282710:intron 20.0%
!! CGATAATATACAAAATACAA+GGG - chr8_3:23457054-23457073 None:intergenic 20.0%
!! ACGATAATATACAAAATACA+AGG - chr8_3:23457055-23457074 None:intergenic 20.0%
!! TAAATAAACTCCATATCTTT+GGG - chr8_3:23457363-23457382 None:intergenic 20.0%
!!! TCAGAGTTAGATATAATTTT+AGG + chr8_3:23457993-23458012 Msa1282710:three_prime_UTR 20.0%
!!! GAAAGATACATAGTTTTATA+AGG - chr8_3:23458019-23458038 None:intergenic 20.0%
! CACGGAGTAAATAAAATATT+GGG - chr8_3:23454075-23454094 None:intergenic 25.0%
! TCACGGAGTAAATAAAATAT+TGG - chr8_3:23454076-23454095 None:intergenic 25.0%
! TAAACTACGATCATTTATCA+CGG - chr8_3:23454093-23454112 None:intergenic 25.0%
!! TTTTGTCAATTGTGATCTAA+AGG + chr8_3:23454647-23454666 Msa1282710:intron 25.0%
! ATTCAAGATAACATTAGCAT+AGG - chr8_3:23454708-23454727 None:intergenic 25.0%
! TGCTAATGTTATCTTGAATT+TGG + chr8_3:23454709-23454728 Msa1282710:intron 25.0%
! TAAATGATCTCATCAATTGA+TGG + chr8_3:23454839-23454858 Msa1282710:intron 25.0%
! AAATGATCTCATCAATTGAT+GGG + chr8_3:23454840-23454859 Msa1282710:intron 25.0%
! ACACATGTTTGATAAAAAAC+AGG + chr8_3:23455097-23455116 Msa1282710:intron 25.0%
! CACATGTTTGATAAAAAACA+GGG + chr8_3:23455098-23455117 Msa1282710:intron 25.0%
! ACATGTTTGATAAAAAACAG+GGG + chr8_3:23455099-23455118 Msa1282710:intron 25.0%
!!! CTCTCTTTTCATTGATTTAA+GGG - chr8_3:23455776-23455795 None:intergenic 25.0%
!!! ACTCTCTTTTCATTGATTTA+AGG - chr8_3:23455777-23455796 None:intergenic 25.0%
! AAGTTACTCTTACATTTCAT+AGG - chr8_3:23455815-23455834 None:intergenic 25.0%
!! TGATCACTCAACATATTTTA+AGG - chr8_3:23455885-23455904 None:intergenic 25.0%
! TCCATTGAAAATGTAGAAAA+AGG + chr8_3:23456058-23456077 Msa1282710:intron 25.0%
! GTAAATTCCCAATAAAATTC+AGG - chr8_3:23456099-23456118 None:intergenic 25.0%
! TAAGTAAAAAAGACACTCTA+AGG + chr8_3:23456140-23456159 Msa1282710:intron 25.0%
!!! GATCAATGCACTTTTAATTT+TGG + chr8_3:23456289-23456308 Msa1282710:intron 25.0%
! ATAACATCATAGATTGGATT+TGG + chr8_3:23456319-23456338 Msa1282710:intron 25.0%
! TGGGAACTAAAAAATTGTAT+CGG - chr8_3:23456367-23456386 None:intergenic 25.0%
! AGAAGGAAAGAAAAAAAAGA+AGG - chr8_3:23456459-23456478 None:intergenic 25.0%
! GTTAATAACTATGGTGATAA+CGG - chr8_3:23456526-23456545 None:intergenic 25.0%
! CACATATCAGTTAATAACTA+TGG - chr8_3:23456535-23456554 None:intergenic 25.0%
!! TGTACTAAGTTCTTTTACAT+CGG + chr8_3:23456556-23456575 Msa1282710:intron 25.0%
!!! ACTTCATTTTTGTTATCAGA+TGG + chr8_3:23456623-23456642 Msa1282710:intron 25.0%
! GCATTTCAAAACTAGAAATA+AGG - chr8_3:23456798-23456817 None:intergenic 25.0%
!!! GTTTTTTCTGAAGAAAGAAA+TGG + chr8_3:23457125-23457144 Msa1282710:intron 25.0%
! AAGAAAGAAATGGCAAAATA+GGG + chr8_3:23457135-23457154 Msa1282710:intron 25.0%
!!! AAAATTGTTTGGTTTGACAA+TGG + chr8_3:23457212-23457231 Msa1282710:intron 25.0%
! CTAAATAAACTCCATATCTT+TGG - chr8_3:23457364-23457383 None:intergenic 25.0%
! TAAGTTGCAAAACAATAACT+AGG - chr8_3:23457788-23457807 None:intergenic 25.0%
!!! TATTGTTTTGCAACTTATGA+TGG + chr8_3:23457791-23457810 Msa1282710:three_prime_UTR 25.0%
! TGATGGTTTCATTTATATCA+AGG + chr8_3:23457808-23457827 Msa1282710:three_prime_UTR 25.0%
! ACTAATGCAATTAAGATCAT+GGG - chr8_3:23457837-23457856 None:intergenic 25.0%
! AACTAATGCAATTAAGATCA+TGG - chr8_3:23457838-23457857 None:intergenic 25.0%
! GGTTTGTTTGTTACTTACTT+AGG - chr8_3:23453810-23453829 None:intergenic 30.0%
AGGAAGAAGAAGAATAAGAA+GGG - chr8_3:23453859-23453878 None:intergenic 30.0%
TCGTTCATATGAATTGTATG+TGG + chr8_3:23454115-23454134 Msa1282710:intron 30.0%
! GGTTATAATAAAGGCTTGTT+TGG + chr8_3:23454136-23454155 Msa1282710:intron 30.0%
TATGTCAAAGTCAATCCAAA+CGG - chr8_3:23454219-23454238 None:intergenic 30.0%
CTACATGTATAAACACTAGT+GGG - chr8_3:23454530-23454549 None:intergenic 30.0%
TCTACATGTATAAACACTAG+TGG - chr8_3:23454531-23454550 None:intergenic 30.0%
AATGTTATCTTGAATTTGGC+TGG + chr8_3:23454713-23454732 Msa1282710:intron 30.0%
AAGCTTAATAAAGCAGTATC+TGG + chr8_3:23454960-23454979 Msa1282710:intron 30.0%
GTACTTAAATGACCAACATT+TGG - chr8_3:23455025-23455044 None:intergenic 30.0%
TTTATCCAATCAATACAACC+AGG - chr8_3:23455062-23455081 None:intergenic 30.0%
CATGTTTGATAAAAAACAGG+GGG + chr8_3:23455100-23455119 Msa1282710:intron 30.0%
ATGTTTGATAAAAAACAGGG+GGG + chr8_3:23455101-23455120 Msa1282710:intron 30.0%
GGGGGGAATATTAATAAATT+GGG + chr8_3:23455119-23455138 Msa1282710:intron 30.0%
!!! AACTGTTGACTTTTGTCAAA+TGG + chr8_3:23455295-23455314 Msa1282710:intron 30.0%
!! AGTTCTTTAAAGTTCATCCA+GGG - chr8_3:23455461-23455480 None:intergenic 30.0%
!! AAGTTCTTTAAAGTTCATCC+AGG - chr8_3:23455462-23455481 None:intergenic 30.0%
AACAATTAAGAAGGGACAAA+GGG - chr8_3:23455645-23455664 None:intergenic 30.0%
AAAGAGAGTAAATTAGTGAG+TGG + chr8_3:23455788-23455807 Msa1282710:intron 30.0%
AAATATGTTGAGTGATCAGA+AGG + chr8_3:23455887-23455906 Msa1282710:intron 30.0%
ATCATATTTAGTGCAACATC+AGG + chr8_3:23456011-23456030 Msa1282710:intron 30.0%
! GCCTTTTTCTACATTTTCAA+TGG - chr8_3:23456062-23456081 None:intergenic 30.0%
AAATGTAGAAAAAGGCTTGT+AGG + chr8_3:23456066-23456085 Msa1282710:intron 30.0%
TAAAAAATTGTATCGGAGGA+AGG - chr8_3:23456360-23456379 None:intergenic 30.0%
GAACTAAAAAATTGTATCGG+AGG - chr8_3:23456364-23456383 None:intergenic 30.0%
!!! TTTTTTAGTTCCCACAATTG+AGG + chr8_3:23456373-23456392 Msa1282710:intron 30.0%
!!! TTTTTAGTTCCCACAATTGA+GGG + chr8_3:23456374-23456393 Msa1282710:intron 30.0%
TGGAAATTATAGAGCTCTTT+GGG - chr8_3:23456430-23456449 None:intergenic 30.0%
GAAAAAAAAGAAGGAAGAAG+TGG - chr8_3:23456450-23456469 None:intergenic 30.0%
CATGCAAGAATAGTACTAAA+TGG - chr8_3:23456977-23456996 None:intergenic 30.0%
GAAGAAAGAAATGGCAAAAT+AGG + chr8_3:23457134-23457153 Msa1282710:intron 30.0%
AATGCAGATTCTCTTATGTT+TGG - chr8_3:23457396-23457415 None:intergenic 30.0%
AACATAAGAGAATCTGCATT+TGG + chr8_3:23457396-23457415 Msa1282710:intron 30.0%
ACATAAGAGAATCTGCATTT+GGG + chr8_3:23457397-23457416 Msa1282710:intron 30.0%
TAACTTCCATCTTAATCAGA+TGG + chr8_3:23457571-23457590 Msa1282710:CDS 30.0%
! TGAAAATGTGTTTGTTGACT+AGG + chr8_3:23457866-23457885 Msa1282710:three_prime_UTR 30.0%
! GAAAATGTGTTTGTTGACTA+GGG + chr8_3:23457867-23457886 Msa1282710:three_prime_UTR 30.0%
TATGGATATAGCATGTGTTA+GGG + chr8_3:23457895-23457914 Msa1282710:three_prime_UTR 30.0%
ATGTGTTAGGGAAAACTATT+GGG + chr8_3:23457907-23457926 Msa1282710:three_prime_UTR 30.0%
TTTACATCCATGAACTTAGT+CGG - chr8_3:23457942-23457961 None:intergenic 30.0%
GAGGAAGAAGAAGAATAAGA+AGG - chr8_3:23453860-23453879 None:intergenic 35.0%
!! TTCACTGTTCTAGAATCTTC+CGG + chr8_3:23453886-23453905 Msa1282710:CDS 35.0%
ATGTCAAAGTCAATCCAAAC+GGG - chr8_3:23454218-23454237 None:intergenic 35.0%
TTAACAAAAGTAGGCAGTCT+TGG - chr8_3:23454932-23454951 None:intergenic 35.0%
TGGTTTGATTCTTGGTTAGT+TGG + chr8_3:23454980-23454999 Msa1282710:intron 35.0%
! CATTTGGAGGAACACAATTT+TGG - chr8_3:23455009-23455028 None:intergenic 35.0%
AATTGTGTTCCTCCAAATGT+TGG + chr8_3:23455010-23455029 Msa1282710:intron 35.0%
CTTAAATGACCAACATTTGG+AGG - chr8_3:23455022-23455041 None:intergenic 35.0%
TGTTTGATAAAAAACAGGGG+GGG + chr8_3:23455102-23455121 Msa1282710:intron 35.0%
GGGGGGGAATATTAATAAAT+TGG + chr8_3:23455118-23455137 Msa1282710:intron 35.0%
GCTCTAATGTACTTGTTTAC+TGG + chr8_3:23455172-23455191 Msa1282710:intron 35.0%
TCGTCGAATTGAAAGTAAGA+CGG - chr8_3:23455252-23455271 None:intergenic 35.0%
AGATCTGAAGAGGTAAATGA+TGG - chr8_3:23455518-23455537 None:intergenic 35.0%
TCATTTACCTCTTCAGATCT+TGG + chr8_3:23455518-23455537 Msa1282710:CDS 35.0%
! TTCAGATCTTGGTGTGATAA+AGG + chr8_3:23455529-23455548 Msa1282710:CDS 35.0%
! TCAGATCTTGGTGTGATAAA+GGG + chr8_3:23455530-23455549 Msa1282710:CDS 35.0%
AATAAGCGGTCTACACAAAA+TGG - chr8_3:23455560-23455579 None:intergenic 35.0%
! TTAACAGGCTAGCCATTAAT+AGG + chr8_3:23455591-23455610 Msa1282710:intron 35.0%
! TAACAGGCTAGCCATTAATA+GGG + chr8_3:23455592-23455611 Msa1282710:intron 35.0%
!! CATTAATAGGGGTGTTTGAA+GGG + chr8_3:23455604-23455623 Msa1282710:intron 35.0%
!! ATTAATAGGGGTGTTTGAAG+GGG + chr8_3:23455605-23455624 Msa1282710:intron 35.0%
CAACAATTAAGAAGGGACAA+AGG - chr8_3:23455646-23455665 None:intergenic 35.0%
!! CAACAATTTTGGCAACTTGT+TGG - chr8_3:23455913-23455932 None:intergenic 35.0%
!! ATCCTGCTTTAAAGTGAACT+TGG + chr8_3:23455946-23455965 Msa1282710:intron 35.0%
!! TCCTGCTTTAAAGTGAACTT+GGG + chr8_3:23455947-23455966 Msa1282710:intron 35.0%
! TTGGGAGATAGTGTTTGTTT+TGG + chr8_3:23455965-23455984 Msa1282710:intron 35.0%
!!! ATAGTGTTTGTTTTGGTCAG+AGG + chr8_3:23455972-23455991 Msa1282710:intron 35.0%
! AGTGAGGCCTGAATTTTATT+GGG + chr8_3:23456089-23456108 Msa1282710:intron 35.0%
!!! TTTTAGTTCCCACAATTGAG+GGG + chr8_3:23456375-23456394 Msa1282710:intron 35.0%
AAATTATAGAGCTCTTTGGG+GGG - chr8_3:23456427-23456446 None:intergenic 35.0%
GAAATTATAGAGCTCTTTGG+GGG - chr8_3:23456428-23456447 None:intergenic 35.0%
GGAAATTATAGAGCTCTTTG+GGG - chr8_3:23456429-23456448 None:intergenic 35.0%
GTGGAAATTATAGAGCTCTT+TGG - chr8_3:23456431-23456450 None:intergenic 35.0%
!! TAACTATGGTGATAACGGTT+AGG - chr8_3:23456521-23456540 None:intergenic 35.0%
TTGCTTAGAGATAATGCAAG+CGG + chr8_3:23457081-23457100 Msa1282710:intron 35.0%
AGAAATGGCAAAATAGGGTA+AGG + chr8_3:23457140-23457159 Msa1282710:intron 35.0%
AGCTATGTATTCTTGCGATT+AGG + chr8_3:23457329-23457348 Msa1282710:intron 35.0%
!!! TGTTGGTTTTTCATCACTGA+TGG + chr8_3:23457430-23457449 Msa1282710:intron 35.0%
CTTGAGAAGCAAGTTAAACT+TGG - chr8_3:23457492-23457511 None:intergenic 35.0%
!! CAAGTTTAACTTGCTTCTCA+AGG + chr8_3:23457490-23457509 Msa1282710:CDS 35.0%
ACAGAAAGAAGAGAAGTTCA+AGG + chr8_3:23457523-23457542 Msa1282710:CDS 35.0%
! TTGTTGACTAGGGATTACTA+TGG + chr8_3:23457877-23457896 Msa1282710:three_prime_UTR 35.0%
CTATGGATATAGCATGTGTT+AGG + chr8_3:23457894-23457913 Msa1282710:three_prime_UTR 35.0%
CATGTGTTAGGGAAAACTAT+TGG + chr8_3:23457906-23457925 Msa1282710:three_prime_UTR 35.0%
GACTAAGTTCATGGATGTAA+AGG + chr8_3:23457941-23457960 Msa1282710:three_prime_UTR 35.0%
CGGAGACAAAGCAATACATA+CGG + chr8_3:23453726-23453745 Msa1282710:five_prime_UTR 40.0%
TGGTTTAACGCAGTAGTGTT+GGG - chr8_3:23453769-23453788 None:intergenic 40.0%
TTGGTTTAACGCAGTAGTGT+TGG - chr8_3:23453770-23453789 None:intergenic 40.0%
! GGAATGAAAGAAGTGTGCTT+TGG - chr8_3:23453789-23453808 None:intergenic 40.0%
CTAGAACAGTGAATATAGCG+AGG - chr8_3:23453879-23453898 None:intergenic 40.0%
! TCGAGAGAATTTTCAGAGCT+GGG - chr8_3:23453976-23453995 None:intergenic 40.0%
! TTCGAGAGAATTTTCAGAGC+TGG - chr8_3:23453977-23453996 None:intergenic 40.0%
TGATCAACACAACACCAAAC+AGG + chr8_3:23454023-23454042 Msa1282710:CDS 40.0%
! AAGCTATCCAGAAGAGTGTA+TGG + chr8_3:23454431-23454450 Msa1282710:intron 40.0%
! AGCTTTTCCATACACTCTTC+TGG - chr8_3:23454441-23454460 None:intergenic 40.0%
TAAACACTAGTGGGACTGTT+TGG - chr8_3:23454521-23454540 None:intergenic 40.0%
ACATTGTGCTTATGCTTGCT+TGG + chr8_3:23454752-23454771 Msa1282710:intron 40.0%
CATTGTGCTTATGCTTGCTT+GGG + chr8_3:23454753-23454772 Msa1282710:intron 40.0%
AGATCATAGCCTCTTCAAGT+GGG + chr8_3:23454776-23454795 Msa1282710:intron 40.0%
AAACCAAATCCCACTTGAAG+AGG - chr8_3:23454788-23454807 None:intergenic 40.0%
TTGATGGGAAAATCAACCGT+TGG + chr8_3:23454855-23454874 Msa1282710:intron 40.0%
! GCAGTATCTGGTTTGATTCT+TGG + chr8_3:23454972-23454991 Msa1282710:intron 40.0%
GTACAATAATGTTCGGAACC+TGG + chr8_3:23455041-23455060 Msa1282710:intron 40.0%
CGTCGAATTGAAAGTAAGAC+GGG - chr8_3:23455251-23455270 None:intergenic 40.0%
! GGTGTTGTAGAATTCACTTC+TGG + chr8_3:23455316-23455335 Msa1282710:intron 40.0%
AGATCTATGAAGCCAAAGTC+TGG + chr8_3:23455429-23455448 Msa1282710:CDS 40.0%
GATCTATGAAGCCAAAGTCT+GGG + chr8_3:23455430-23455449 Msa1282710:CDS 40.0%
TATCACACCAAGATCTGAAG+AGG - chr8_3:23455528-23455547 None:intergenic 40.0%
! AACAGGCTAGCCATTAATAG+GGG + chr8_3:23455593-23455612 Msa1282710:intron 40.0%
CCTTCAAACACCCCTATTAA+TGG - chr8_3:23455606-23455625 None:intergenic 40.0%
!! CCATTAATAGGGGTGTTTGA+AGG + chr8_3:23455603-23455622 Msa1282710:intron 40.0%
!! ATGATGACGCGCAACAATTT+TGG - chr8_3:23455924-23455943 None:intergenic 40.0%
!! TCCCAAGTTCACTTTAAAGC+AGG - chr8_3:23455951-23455970 None:intergenic 40.0%
!!! TGTTTGTTTTGGTCAGAGGT+TGG + chr8_3:23455976-23455995 Msa1282710:intron 40.0%
! GAGTGAGGCCTGAATTTTAT+TGG + chr8_3:23456088-23456107 Msa1282710:intron 40.0%
TTTGGAGGGATGAGATTAGA+GGG + chr8_3:23456201-23456220 Msa1282710:intron 40.0%
! TTGTATCGGAGGAAGGTTTT+GGG - chr8_3:23456353-23456372 None:intergenic 40.0%
! ATTGTATCGGAGGAAGGTTT+TGG - chr8_3:23456354-23456373 None:intergenic 40.0%
! TTTAGTTCCCACAATTGAGG+GGG + chr8_3:23456376-23456395 Msa1282710:intron 40.0%
ACAAAATCCCCCTCAATTGT+GGG - chr8_3:23456386-23456405 None:intergenic 40.0%
AACAAAATCCCCCTCAATTG+TGG - chr8_3:23456387-23456406 None:intergenic 40.0%
ATAACGGTTAGGCTCTGTTT+GGG - chr8_3:23456510-23456529 None:intergenic 40.0%
ATGCCACGTGATTGAATTGT+TGG + chr8_3:23456814-23456833 Msa1282710:intron 40.0%
CAACCAACAATTCAATCACG+TGG - chr8_3:23456820-23456839 None:intergenic 40.0%
ACATGCTCACGCAGTAAAAA+TGG - chr8_3:23457028-23457047 None:intergenic 40.0%
TTAGAGATAATGCAAGCGGA+TGG + chr8_3:23457085-23457104 Msa1282710:intron 40.0%
TAGAGATAATGCAAGCGGAT+GGG + chr8_3:23457086-23457105 Msa1282710:intron 40.0%
GGATGTCTAAATTGTTGTGC+AGG + chr8_3:23457451-23457470 Msa1282710:intron 40.0%
AGAAGAGAAGTTCAAGGTAG+AGG + chr8_3:23457529-23457548 Msa1282710:CDS 40.0%
CTGCTTCCATCTGATTAAGA+TGG - chr8_3:23457580-23457599 None:intergenic 40.0%
CCAAGCTTAATAGTAGGACT+AGG - chr8_3:23457609-23457628 None:intergenic 40.0%
CCTAGTCCTACTATTAAGCT+TGG + chr8_3:23457606-23457625 Msa1282710:exon 40.0%
CTGTGACCAAGCTTAATAGT+AGG - chr8_3:23457615-23457634 None:intergenic 40.0%
CTTGGTCACAGTAGCATTAT+AGG + chr8_3:23457624-23457643 Msa1282710:three_prime_UTR 40.0%
TCAGTGCTTTCTTTATGCCT+TGG + chr8_3:23457762-23457781 Msa1282710:three_prime_UTR 40.0%
GCAAAACAATAACTAGGCCA+AGG - chr8_3:23457782-23457801 None:intergenic 40.0%
TGTTAGGGAAAACTATTGGG+AGG + chr8_3:23457910-23457929 Msa1282710:three_prime_UTR 40.0%
GGCTTCGAAACTAAGCAACA+CGG + chr8_3:23453706-23453725 Msa1282710:five_prime_UTR 45.0%
TAAGAAGGGAAGAAGCGAAG+TGG - chr8_3:23453845-23453864 None:intergenic 45.0%
ATCGAAATCGGAACAGTGAC+CGG - chr8_3:23453908-23453927 None:intergenic 45.0%
CATTTGCGCGTGATCGAAAT+CGG - chr8_3:23453920-23453939 None:intergenic 45.0%
! GAGAGAATTTTCAGAGCTGG+GGG - chr8_3:23453974-23453993 None:intergenic 45.0%
! CGAGAGAATTTTCAGAGCTG+GGG - chr8_3:23453975-23453994 None:intergenic 45.0%
TGTGATGCTTGAGGTCAGTT+TGG - chr8_3:23454573-23454592 None:intergenic 45.0%
ATAGACACGTGTGATGCTTG+AGG - chr8_3:23454582-23454601 None:intergenic 45.0%
GAGATCATAGCCTCTTCAAG+TGG + chr8_3:23454775-23454794 Msa1282710:intron 45.0%
TAGCCTCTTCAAGTGGGATT+TGG + chr8_3:23454782-23454801 Msa1282710:intron 45.0%
! CGGAACCTGGTTGTATTGAT+TGG + chr8_3:23455054-23455073 Msa1282710:intron 45.0%
!! ATTCACTTCTGGAGTTCGCA+AGG + chr8_3:23455327-23455346 Msa1282710:CDS 45.0%
!! TTCACTTCTGGAGTTCGCAA+GGG + chr8_3:23455328-23455347 Msa1282710:CDS 45.0%
ACTGCATCATCTTACTCTCG+AGG + chr8_3:23455385-23455404 Msa1282710:CDS 45.0%
TACTCTCGAGGCTATAGATG+CGG + chr8_3:23455397-23455416 Msa1282710:CDS 45.0%
CTTACTGAGTTCAAGCATGC+TGG + chr8_3:23455479-23455498 Msa1282710:CDS 45.0%
GAAAAAGGCTTGTAGGAGTG+AGG + chr8_3:23456073-23456092 Msa1282710:intron 45.0%
!! AGACACTCTAAGGCTCTGTT+TGG + chr8_3:23456150-23456169 Msa1282710:intron 45.0%
!! GACACTCTAAGGCTCTGTTT+GGG + chr8_3:23456151-23456170 Msa1282710:intron 45.0%
GCTCTGTTTGGGAGTTTGTA+GGG + chr8_3:23456162-23456181 Msa1282710:intron 45.0%
CTCTGTTTGGGAGTTTGTAG+GGG + chr8_3:23456163-23456182 Msa1282710:intron 45.0%
! CTTTGGAGGGATGAGATTAG+AGG + chr8_3:23456200-23456219 Msa1282710:intron 45.0%
TTAGGCTCTGTTTGGGAGTT+TGG - chr8_3:23456503-23456522 None:intergenic 45.0%
! GATAACGGTTAGGCTCTGTT+TGG - chr8_3:23456511-23456530 None:intergenic 45.0%
TTGCTGCATCCTGAACTTGA+GGG - chr8_3:23456685-23456704 None:intergenic 45.0%
TTTGCTGCATCCTGAACTTG+AGG - chr8_3:23456686-23456705 None:intergenic 45.0%
! CTCATAGGGCACTAGTGAAT+TGG - chr8_3:23456738-23456757 None:intergenic 45.0%
GAAACCTCATGGAGCTCATA+GGG - chr8_3:23456752-23456771 None:intergenic 45.0%
AGAAACCTCATGGAGCTCAT+AGG - chr8_3:23456753-23456772 None:intergenic 45.0%
AGAGATAATGCAAGCGGATG+GGG + chr8_3:23457087-23457106 Msa1282710:intron 45.0%
GGACACTGTTCCCAAAGATA+TGG + chr8_3:23457350-23457369 Msa1282710:intron 45.0%
ATTTGGGCTGCTAAGCTTGT+TGG + chr8_3:23457413-23457432 Msa1282710:intron 45.0%
ACTTGCTTCTCAAGGTCAAG+CGG + chr8_3:23457498-23457517 Msa1282710:CDS 45.0%
GAGGTGCACAAGAATAACGA+AGG + chr8_3:23457548-23457567 Msa1282710:CDS 45.0%
!! GCTTGTACCGACTAAGTTCA+TGG + chr8_3:23457932-23457951 Msa1282710:three_prime_UTR 45.0%
!!! TAATTTTTTGTTTATATTTT+CGG + chr8_3:23456840-23456859 Msa1282710:intron 5.0%
GCGAAGTGGTTGCTCTCATT+AGG - chr8_3:23453831-23453850 None:intergenic 50.0%
CGATTTCGATCACGCGCAAA+TGG + chr8_3:23453918-23453937 Msa1282710:CDS 50.0%
GCATGAACTATGAGCCCGTT+TGG + chr8_3:23454201-23454220 Msa1282710:intron 50.0%
CTAGTGGGACTGTTTGGAAG+AGG - chr8_3:23454515-23454534 None:intergenic 50.0%
CAAAAGTAGGCAGTCTTGGC+AGG - chr8_3:23454928-23454947 None:intergenic 50.0%
ACTCTCGAGGCTATAGATGC+GGG + chr8_3:23455398-23455417 Msa1282710:CDS 50.0%
! CCAGGGTTTTACCCAGACTT+TGG - chr8_3:23455444-23455463 None:intergenic 50.0%
CCAAAGTCTGGGTAAAACCC+TGG + chr8_3:23455441-23455460 Msa1282710:CDS 50.0%
GAGTTCAAGCATGCTGGTGA+TGG + chr8_3:23455485-23455504 Msa1282710:CDS 50.0%
GGCTCTGTTTGGGAGTTTGT+AGG + chr8_3:23456161-23456180 Msa1282710:intron 50.0%
TGTTTGGGAGTTTGTAGGGG+AGG + chr8_3:23456166-23456185 Msa1282710:intron 50.0%
GTTTGGGAGTTTGTAGGGGA+GGG + chr8_3:23456167-23456186 Msa1282710:intron 50.0%
TTTGGGAGTTTGTAGGGGAG+GGG + chr8_3:23456168-23456187 Msa1282710:intron 50.0%
CTCTGTTTGGGAGTTTGGAG+GGG - chr8_3:23456498-23456517 None:intergenic 50.0%
GCTCTGTTTGGGAGTTTGGA+GGG - chr8_3:23456499-23456518 None:intergenic 50.0%
TTATCAGATGGCCACAAGCC+AGG + chr8_3:23456635-23456654 Msa1282710:intron 50.0%
CTGTTAAGACCATCCAGCAG+AGG + chr8_3:23456711-23456730 Msa1282710:CDS 50.0%
TGAATTGGACCTCTGCTGGA+TGG - chr8_3:23456723-23456742 None:intergenic 50.0%
CTAGTGAATTGGACCTCTGC+TGG - chr8_3:23456727-23456746 None:intergenic 50.0%
CCTTCGCATCAGAAACCTCA+TGG - chr8_3:23456763-23456782 None:intergenic 50.0%
CCATGAGGTTTCTGATGCGA+AGG + chr8_3:23456760-23456779 Msa1282710:CDS 50.0%
GAAACAGACTCGTGCATAGC+TGG + chr8_3:23457164-23457183 Msa1282710:intron 50.0%
CTTGCTTCTCAAGGTCAAGC+GGG + chr8_3:23457499-23457518 Msa1282710:CDS 50.0%
TTGCTTCTCAAGGTCAAGCG+GGG + chr8_3:23457500-23457519 Msa1282710:CDS 50.0%
AGTAGCATTATAGGCCTGCG+TGG + chr8_3:23457633-23457652 Msa1282710:three_prime_UTR 50.0%
! TGCAAATTTAGGGTCCACGC+AGG - chr8_3:23457650-23457669 None:intergenic 50.0%
GGGAATCGTGAATACCTCCG+GGG - chr8_3:23453954-23453973 None:intergenic 55.0%
GGGGAATCGTGAATACCTCC+GGG - chr8_3:23453955-23453974 None:intergenic 55.0%
GGGGGAATCGTGAATACCTC+CGG - chr8_3:23453956-23453975 None:intergenic 55.0%
!! ACTTCTGGAGTTCGCAAGGG+TGG + chr8_3:23455331-23455350 Msa1282710:CDS 55.0%
TCGCAAGGGTGGTGAAAGCA+CGG + chr8_3:23455342-23455361 Msa1282710:CDS 55.0%
GCACGGGAACAGGTTGTTAC+TGG + chr8_3:23455359-23455378 Msa1282710:CDS 55.0%
GAGTTTGGAGGGGAAGAGAG+GGG - chr8_3:23456488-23456507 None:intergenic 55.0%
GGAGTTTGGAGGGGAAGAGA+GGG - chr8_3:23456489-23456508 None:intergenic 55.0%
GGCTCTGTTTGGGAGTTTGG+AGG - chr8_3:23456500-23456519 None:intergenic 55.0%
TGAACTTGAGGGTCACGTGC+TGG - chr8_3:23456674-23456693 None:intergenic 55.0%
AGCACGTGACCCTCAAGTTC+AGG + chr8_3:23456673-23456692 Msa1282710:CDS 55.0%
AGTGCCCTATGAGCTCCATG+AGG + chr8_3:23456745-23456764 Msa1282710:CDS 55.0%
GGTTTCTGATGCGAAGGCTG+AGG + chr8_3:23456766-23456785 Msa1282710:CDS 55.0%
CAAATGGCCACTCCACTCCC+CGG + chr8_3:23453934-23453953 Msa1282710:CDS 60.0%
AATACCTCCGGGGAGTGGAG+TGG - chr8_3:23453944-23453963 None:intergenic 60.0%
TCGTGAATACCTCCGGGGAG+TGG - chr8_3:23453949-23453968 None:intergenic 60.0%
! CGCAAGGGTGGTGAAAGCAC+GGG + chr8_3:23455343-23455362 Msa1282710:CDS 60.0%
! GGTGGTGAAAGCACGGGAAC+AGG + chr8_3:23455349-23455368 Msa1282710:CDS 60.0%
GGAGTTTGTAGGGGAGGGGA+GGG + chr8_3:23456172-23456191 Msa1282710:intron 60.0%
GAGTTTGTAGGGGAGGGGAG+GGG + chr8_3:23456173-23456192 Msa1282710:intron 60.0%
GAAGAGAGGGGAGGGCTAGA+AGG - chr8_3:23456476-23456495 None:intergenic 60.0%
TTGGAGGGGAAGAGAGGGGA+GGG - chr8_3:23456484-23456503 None:intergenic 60.0%
TTTGGAGGGGAAGAGAGGGG+AGG - chr8_3:23456485-23456504 None:intergenic 60.0%
GGGAGTTTGGAGGGGAAGAG+AGG - chr8_3:23456490-23456509 None:intergenic 60.0%
CAGATGGCCACAAGCCAGGT+TGG + chr8_3:23456639-23456658 Msa1282710:intron 60.0%
! CCACAAGCCAGGTTGGCAGT+CGG + chr8_3:23456646-23456665 Msa1282710:CDS 60.0%
GGGAGTTTGTAGGGGAGGGG+AGG + chr8_3:23456171-23456190 Msa1282710:intron 65.0%
TTTGTAGGGGAGGGGAGGGG+AGG + chr8_3:23456176-23456195 Msa1282710:intron 65.0%
TTGTAGGGGAGGGGAGGGGA+GGG + chr8_3:23456177-23456196 Msa1282710:intron 65.0%
! CCGACTGCCAACCTGGCTTG+TGG - chr8_3:23456649-23456668 None:intergenic 65.0%
GCTGGAACCGACTGCCAACC+TGG - chr8_3:23456656-23456675 None:intergenic 65.0%
ATGGCCACTCCACTCCCCGG+AGG + chr8_3:23453937-23453956 Msa1282710:CDS 70.0%
! AGGGGAGGGGAGGGCTTTGG+AGG + chr8_3:23456186-23456205 Msa1282710:intron 70.0%
!! GGGGAGGGGAGGGCTTTGGA+GGG + chr8_3:23456187-23456206 Msa1282710:intron 70.0%
GGGAGGGGAGGGGAGGGCTT+TGG + chr8_3:23456183-23456202 Msa1282710:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 23453704 23458050 23453704 ID=Msa1282710;Name=Msa1282710
chr8_3 mRNA 23453704 23458050 23453704 ID=Msa1282710-mRNA-1;Parent=Msa1282710;Name=Msa1282710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=128|1|1|1|1|1|4|440|240
chr8_3 exon 23453704 23454044 23453704 ID=Msa1282710-mRNA-1:exon:8329;Parent=Msa1282710-mRNA-1
chr8_3 exon 23455326 23455551 23455326 ID=Msa1282710-mRNA-1:exon:8330;Parent=Msa1282710-mRNA-1
chr8_3 exon 23456642 23456787 23456642 ID=Msa1282710-mRNA-1:exon:8331;Parent=Msa1282710-mRNA-1
chr8_3 exon 23457473 23458050 23457473 ID=Msa1282710-mRNA-1:exon:8332;Parent=Msa1282710-mRNA-1
chr8_3 five_prime_UTR 23453704 23453831 23453704 ID=Msa1282710-mRNA-1:five_prime_utr;Parent=Msa1282710-mRNA-1
chr8_3 CDS 23453832 23454044 23453832 ID=Msa1282710-mRNA-1:cds;Parent=Msa1282710-mRNA-1
chr8_3 CDS 23455326 23455551 23455326 ID=Msa1282710-mRNA-1:cds;Parent=Msa1282710-mRNA-1
chr8_3 CDS 23456642 23456787 23456642 ID=Msa1282710-mRNA-1:cds;Parent=Msa1282710-mRNA-1
chr8_3 CDS 23457473 23457610 23457473 ID=Msa1282710-mRNA-1:cds;Parent=Msa1282710-mRNA-1
chr8_3 three_prime_UTR 23457611 23458050 23457611 ID=Msa1282710-mRNA-1:three_prime_utr;Parent=Msa1282710-mRNA-1
Gene Sequence

>Msa1282710

ATGAGAGCAACCACTTCGCTTCTTCCCTTCTTATTCTTCTTCTTCCTCGCTATATTCACTGTTCTAGAATCTTCCGGTCACTGTTCCGATTTCGATCACGCGCAAATGGCCACTCCACTCCCCGGAGGTATTCACGATTCCCCCAGCTCTGAAAATTCTCTCGAAATTGAATCTCTTGCTCGATTCGCTGTTGATCAACACAACACCAAACAGAATTCACTTCTGGAGTTCGCAAGGGTGGTGAAAGCACGGGAACAGGTTGTTACTGGTACACTGCATCATCTTACTCTCGAGGCTATAGATGCGGGTGAGAAGAAGATCTATGAAGCCAAAGTCTGGGTAAAACCCTGGATGAACTTTAAAGAACTTACTGAGTTCAAGCATGCTGGTGATGGTCATGCACCATCATTTACCTCTTCAGATCTTGGTGTGATAAAGGATGGCCACAAGCCAGGTTGGCAGTCGGTTCCAGCACGTGACCCTCAAGTTCAGGATGCAGCAAATCATGCTGTTAAGACCATCCAGCAGAGGTCCAATTCACTAGTGCCCTATGAGCTCCATGAGGTTTCTGATGCGAAGGCTGAGGTCATCGATGATACTGCCAAGTTTAACTTGCTTCTCAAGGTCAAGCGGGGACAGAAAGAAGAGAAGTTCAAGGTAGAGGTGCACAAGAATAACGAAGGTAACTTCCATCTTAATCAGATGGAAGCAGATAATTCCTAG
Protein sequence

>Msa1282710

MRATTSLLPFLFFFFLAIFTVLESSGHCSDFDHAQMATPLPGGIHDSPSSENSLEIESLARFAVDQHNTKQNSLLEFARVVKAREQVVTGTLHHLTLEAIDAGEKKIYEAKVWVKPWMNFKELTEFKHAGDGHAPSFTSSDLGVIKDGHKPGWQSVPARDPQVQDAANHAVKTIQQRSNSLVPYELHEVSDAKAEVIDDTAKFNLLLKVKRGQKEEKFKVEVHKNNEGNFHLNQMEADNS*