Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241460 | XP_003628013.1 | 96.330 | 218 | 7 | 1 | 23 | 240 | 25 | 241 | 3.69e-152 | 433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241460 | sp|Q0JNR2|CYT12_ORYSJ | 67.662 | 201 | 63 | 1 | 36 | 236 | 43 | 241 | 2.49e-98 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241460 | G7LID2 | 96.330 | 218 | 7 | 1 | 23 | 240 | 25 | 241 | 1.76e-152 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1241430 | Msa1241460 | 0.985603 | 4.398975e-164 | -8.615850e-47 |
| Msa1241460 | Msa1282710 | 0.871742 | 5.419971e-67 | -8.615850e-47 |
| Msa1204100 | Msa1241460 | 0.801885 | 7.290481e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241460 | MtrunA17_Chr8g0354141 | 96.330 | 218 | 7 | 1 | 23 | 240 | 25 | 241 | 3.40e-156 | 433 |
| Msa1241460 | MtrunA17_Chr3g0093771 | 61.616 | 99 | 36 | 1 | 36 | 134 | 25 | 121 | 5.86e-37 | 126 |
| Msa1241460 | MtrunA17_Chr5g0441261 | 51.000 | 100 | 48 | 1 | 42 | 140 | 5 | 104 | 1.27e-30 | 109 |
| Msa1241460 | MtrunA17_Chr3g0097041 | 49.505 | 101 | 47 | 3 | 42 | 141 | 63 | 160 | 8.36e-24 | 94.0 |
| Msa1241460 | MtrunA17_Chr4g0076001 | 41.379 | 87 | 48 | 2 | 41 | 126 | 28 | 112 | 8.39e-14 | 65.9 |
| Msa1241460 | MtrunA17_Chr2g0290101 | 35.897 | 117 | 65 | 3 | 11 | 127 | 8 | 114 | 1.16e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1241460 | AT3G12490.2 | 62.931 | 232 | 81 | 2 | 5 | 236 | 4 | 230 | 1.09e-98 | 287 |
| Msa1241460 | AT3G12490.1 | 68.790 | 157 | 47 | 1 | 40 | 196 | 3 | 157 | 3.71e-73 | 220 |
| Msa1241460 | AT5G05110.1 | 56.021 | 191 | 79 | 2 | 42 | 231 | 46 | 232 | 3.83e-70 | 215 |
| Msa1241460 | AT2G40880.1 | 57.843 | 102 | 43 | 0 | 28 | 129 | 22 | 123 | 8.29e-39 | 131 |
| Msa1241460 | AT5G12140.1 | 50.515 | 97 | 48 | 0 | 35 | 131 | 4 | 100 | 3.90e-29 | 105 |
| Msa1241460 | AT5G47550.1 | 41.250 | 80 | 46 | 1 | 55 | 133 | 41 | 120 | 4.18e-13 | 64.7 |
Find 99 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATGTATCGTTCAAGTTT+AGG | 0.229745 | 8_2:-25038697 | Msa1241460:three_prime_UTR |
| CTTGGTCACAGTAGCATTAT+AGG | 0.244708 | 8_2:-25039098 | Msa1241460:three_prime_UTR |
| CTATGTATCGTTCAAGTTTA+GGG | 0.268469 | 8_2:-25038696 | Msa1241460:three_prime_UTR |
| TTCAGATCTTGGTGTGATAA+AGG | 0.306420 | 8_2:-25041232 | Msa1241460:CDS |
| TCATTTACCTCTTCAGATCT+TGG | 0.349534 | 8_2:-25041243 | Msa1241460:CDS |
| GGTGTTGTAGAATTCACTTC+TGG | 0.352339 | 8_2:-25041445 | Msa1241460:intron |
| AGATCTATGAAGCCAAAGTC+TGG | 0.352484 | 8_2:-25041332 | Msa1241460:CDS |
| CTATGGATATAGCATGTGTT+AGG | 0.363855 | 8_2:-25038828 | Msa1241460:three_prime_UTR |
| TTCACTGTTCTAGAATCTTC+CGG | 0.371100 | 8_2:-25042778 | Msa1241460:CDS |
| CTCATAGGGCACTAGTGAAT+TGG | 0.373021 | 8_2:+25039994 | None:intergenic |
| CATGTGTTAGGGAAAACTAT+TGG | 0.389122 | 8_2:-25038816 | Msa1241460:three_prime_UTR |
| TCAGTGCTTTCTTTATGCCT+TGG | 0.393557 | 8_2:-25038960 | Msa1241460:three_prime_UTR |
| GCGAAGTGGTTGCTCTCATT+AGG | 0.398542 | 8_2:+25042836 | None:intergenic |
| AGAAACCTCATGGAGCTCAT+AGG | 0.403459 | 8_2:+25039979 | None:intergenic |
| AACTAATGCAATTAAGATCA+TGG | 0.406774 | 8_2:+25038887 | None:intergenic |
| TGATGGTTTCATTTATATCA+AGG | 0.413492 | 8_2:-25038914 | Msa1241460:three_prime_UTR |
| GGTTTGTTTGTTACTTACTT+AGG | 0.414843 | 8_2:+25042857 | None:intergenic |
| TGGTTTAACGCAGTAGTGTT+GGG | 0.425214 | 8_2:+25042898 | None:intergenic |
| GGTGGTGAAAGCACGGGAAC+AGG | 0.431902 | 8_2:-25041412 | Msa1241460:CDS |
| CTGCTTCCATCTGATTAAGA+TGG | 0.437286 | 8_2:+25039145 | None:intergenic |
| GCTGGAACCGACTGCCAACC+TGG | 0.437555 | 8_2:+25040076 | None:intergenic |
| CTAGTGAATTGGACCTCTGC+TGG | 0.439707 | 8_2:+25040005 | None:intergenic |
| GGAATGAAAGAAGTGTGCTT+TGG | 0.443561 | 8_2:+25042878 | None:intergenic |
| AGCACATGACCCTCAAGTTC+AGG | 0.447338 | 8_2:-25040056 | Msa1241460:CDS |
| CATTTGCGCGTGATCGAAAT+CGG | 0.448077 | 8_2:+25042747 | None:intergenic |
| ATGTGTTAGGGAAAACTATT+GGG | 0.448490 | 8_2:-25038815 | Msa1241460:three_prime_UTR |
| CTAAACTAGGAATACCTGTT+TGG | 0.448700 | 8_2:+25042627 | None:intergenic |
| ATCGAAATCGGAACAGTGAC+CGG | 0.449810 | 8_2:+25042759 | None:intergenic |
| GCACGGGAACAGGTTGTTGC+TGG | 0.454927 | 8_2:-25041402 | Msa1241460:CDS |
| TCAGATCTTGGTGTGATAAA+GGG | 0.457739 | 8_2:-25041231 | Msa1241460:intron |
| CCTAGTCCTACTATTAAGCT+TGG | 0.463961 | 8_2:-25039116 | Msa1241460:exon |
| TTGGTTTAACGCAGTAGTGT+TGG | 0.466467 | 8_2:+25042897 | None:intergenic |
| TTGTTGACTAGGGATTACTA+TGG | 0.467786 | 8_2:-25038845 | Msa1241460:three_prime_UTR |
| GCTTGTACCGACTAAGTTCA+TGG | 0.470198 | 8_2:-25038790 | Msa1241460:three_prime_UTR |
| TTATCAGATGGCCACAAGCC+AGG | 0.483576 | 8_2:-25040094 | Msa1241460:intron |
| CTTGAGAAGCAAGTTAAACT+TGG | 0.487025 | 8_2:+25039233 | None:intergenic |
| CTTGCTTCTCAAGGTCAAGC+GGG | 0.490732 | 8_2:-25039223 | Msa1241460:CDS |
| AAGTTCTTTAAAGTTCATCC+AGG | 0.491331 | 8_2:+25041302 | None:intergenic |
| GAGGAAGAAGAAGAATAAGA+AGG | 0.495659 | 8_2:+25042807 | None:intergenic |
| TGATCAACACAACACCAAAC+AGG | 0.497271 | 8_2:-25042641 | Msa1241460:intron |
| GAAACCTCATGGAGCTCATA+GGG | 0.500032 | 8_2:+25039980 | None:intergenic |
| AGGAAGAAGAAGAATAAGAA+GGG | 0.501335 | 8_2:+25042808 | None:intergenic |
| TGAAAATGTGTTTGTTGACT+AGG | 0.514834 | 8_2:-25038856 | Msa1241460:three_prime_UTR |
| TGAACTTGAGGGTCATGTGC+TGG | 0.515021 | 8_2:+25040058 | None:intergenic |
| CAAGTTTAACTTGCTTCTCA+AGG | 0.515944 | 8_2:-25039232 | Msa1241460:CDS |
| CTGTGACCAAGCTTAATAGT+AGG | 0.519301 | 8_2:+25039110 | None:intergenic |
| TCGTGAATACCTCCGGGGAG+TGG | 0.522213 | 8_2:+25042718 | None:intergenic |
| GACTAAGTTCATGGATGTAA+AGG | 0.524728 | 8_2:-25038781 | Msa1241460:three_prime_UTR |
| TAACTTCCATCTTAATCAGA+TGG | 0.525361 | 8_2:-25039151 | Msa1241460:CDS |
| ACTAATGCAATTAAGATCAT+GGG | 0.525700 | 8_2:+25038888 | None:intergenic |
| AGAAGAGAAGTTCAAGGTAG+AGG | 0.530018 | 8_2:-25039193 | Msa1241460:CDS |
| CCAAGCTTAATAGTAGGACT+AGG | 0.530391 | 8_2:+25039116 | None:intergenic |
| TTGCTGCATCCTGAACTTGA+GGG | 0.533051 | 8_2:+25040047 | None:intergenic |
| TATGGATATAGCATGTGTTA+GGG | 0.542780 | 8_2:-25038827 | Msa1241460:three_prime_UTR |
| CTTACTGAGTTCAAGCATGC+TGG | 0.544063 | 8_2:-25041282 | Msa1241460:CDS |
| GGGGAATCGTGAATACCTCC+GGG | 0.546261 | 8_2:+25042712 | None:intergenic |
| ATTCACTTCTGGAGTTCGCA+AGG | 0.554851 | 8_2:-25041434 | Msa1241460:CDS |
| ACAGAAAGAAGAGAAGTTCA+AGG | 0.554921 | 8_2:-25039199 | Msa1241460:CDS |
| TTTGCTGCATCCTGAACTTG+AGG | 0.555812 | 8_2:+25040046 | None:intergenic |
| GAAAATGTGTTTGTTGACTA+GGG | 0.556471 | 8_2:-25038855 | Msa1241460:three_prime_UTR |
| TCGCAAGGGTGGTGAAAGCA+CGG | 0.557056 | 8_2:-25041419 | Msa1241460:CDS |
| CCATGAGGTTTCTGATGCGA+AGG | 0.562730 | 8_2:-25039969 | Msa1241460:CDS |
| CAGATGGCCACAAGCCAGGT+TGG | 0.562783 | 8_2:-25040090 | Msa1241460:CDS |
| CAAATGGCCACTCCACTCCC+CGG | 0.566217 | 8_2:-25042730 | Msa1241460:CDS |
| GATCTATGAAGCCAAAGTCT+GGG | 0.570925 | 8_2:-25041331 | Msa1241460:CDS |
| ACTCTCGAGGCTATAGATGC+GGG | 0.573383 | 8_2:-25041363 | Msa1241460:CDS |
| TGAATTGGACCTCTGCTGGA+TGG | 0.574153 | 8_2:+25040009 | None:intergenic |
| TTTACATCCATGAACTTAGT+CGG | 0.574726 | 8_2:+25038783 | None:intergenic |
| TACTCTCGAGGCTATAGATG+CGG | 0.578669 | 8_2:-25041364 | Msa1241460:CDS |
| CCTTCGCATCAGAAACCTCA+TGG | 0.585550 | 8_2:+25039969 | None:intergenic |
| TAAGTTGCAAAACAATAACT+AGG | 0.585551 | 8_2:+25038937 | None:intergenic |
| AGATCTGAAGAGGTAAATGA+TGG | 0.591467 | 8_2:+25041246 | None:intergenic |
| CGCAAGGGTGGTGAAAGCAC+GGG | 0.592671 | 8_2:-25041418 | Msa1241460:CDS |
| TATCACACCAAGATCTGAAG+AGG | 0.592973 | 8_2:+25041236 | None:intergenic |
| ACTTCTGGAGTTCGCAAGGG+TGG | 0.593021 | 8_2:-25041430 | Msa1241460:CDS |
| CCAAAGTCTGGGTAAAACCC+TGG | 0.593767 | 8_2:-25041320 | Msa1241460:CDS |
| CCGACTGCCAACCTGGCTTG+TGG | 0.593906 | 8_2:+25040083 | None:intergenic |
| GGTTTCTGATGCGAAGGCTG+AGG | 0.594893 | 8_2:-25039963 | Msa1241460:intron |
| GAGTTCAAGCATGCTGGTGA+TGG | 0.594970 | 8_2:-25041276 | Msa1241460:CDS |
| AATACCTCCGGGGAGTGGAG+TGG | 0.595891 | 8_2:+25042723 | None:intergenic |
| AGTTCTTTAAAGTTCATCCA+GGG | 0.602713 | 8_2:+25041303 | None:intergenic |
| TTCACTTCTGGAGTTCGCAA+GGG | 0.604248 | 8_2:-25041433 | Msa1241460:CDS |
| TAAGAAGGGAAGAAGCGAAG+TGG | 0.605131 | 8_2:+25042822 | None:intergenic |
| ACTTGCTTCTCAAGGTCAAG+CGG | 0.606587 | 8_2:-25039224 | Msa1241460:CDS |
| GCAAAACAATAACTAGGCCA+AGG | 0.613518 | 8_2:+25038943 | None:intergenic |
| CGGAGACAAAGCAATACATA+CGG | 0.617508 | 8_2:-25042938 | Msa1241460:five_prime_UTR |
| TGCAAATTTAGGGTCCACGC+AGG | 0.619749 | 8_2:+25039075 | None:intergenic |
| CCACAAGCCAGGTTGGCAGT+CGG | 0.633993 | 8_2:-25040083 | Msa1241460:CDS |
| TGTTAGGGAAAACTATTGGG+AGG | 0.657890 | 8_2:-25038812 | Msa1241460:three_prime_UTR |
| CTGTTAAGACCATCCAGCAG+AGG | 0.662004 | 8_2:-25040018 | Msa1241460:CDS |
| TTGCTTCTCAAGGTCAAGCG+GGG | 0.670149 | 8_2:-25039222 | Msa1241460:CDS |
| AGTAGCATTATAGGCCTGCG+TGG | 0.681871 | 8_2:-25039089 | Msa1241460:three_prime_UTR |
| CTAGAACAGTGAATATAGCG+AGG | 0.693332 | 8_2:+25042788 | None:intergenic |
| ACTGCATCATCTTACTCTCG+AGG | 0.693606 | 8_2:-25041376 | Msa1241460:CDS |
| GAGGTGCACAAGAATAACGA+AGG | 0.697526 | 8_2:-25039174 | Msa1241460:CDS |
| GGCTTCGAAACTAAGCAACA+CGG | 0.724262 | 8_2:-25042958 | Msa1241460:five_prime_UTR |
| AGTGCCCTATGAGCTCCATG+AGG | 0.734165 | 8_2:-25039984 | Msa1241460:CDS |
| ATGGCCACTCCACTCCCCGG+AGG | 0.738502 | 8_2:-25042727 | Msa1241460:CDS |
| GGGAATCGTGAATACCTCCG+GGG | 0.776720 | 8_2:+25042713 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAAAAGTGAAAATT+AGG | - | chr8_2:25041850-25041869 | Msa1241460:intron | 10.0% |
| !!! | AATTGTTTTATTATAAGCTA+TGG | - | chr8_2:25039320-25039339 | Msa1241460:intron | 15.0% |
| !! | AAAAAATCAACAATTAAGAA+GGG | + | chr8_2:25040546-25040565 | None:intergenic | 15.0% |
| !! | TAAAAAATCAACAATTAAGA+AGG | + | chr8_2:25040547-25040566 | None:intergenic | 15.0% |
| !! | GTAAAATAATTGATAAAGTT+AGG | + | chr8_2:25040647-25040666 | None:intergenic | 15.0% |
| !! | ATAAAATAACAGAAACTATA+AGG | + | chr8_2:25041014-25041033 | None:intergenic | 15.0% |
| !!! | AAATTTTTCAAATTTTCTGA+GGG | - | chr8_2:25041127-25041146 | Msa1241460:intron | 15.0% |
| !!! | TTTTATCAGTTAAAATTGTT+TGG | - | chr8_2:25042133-25042152 | Msa1241460:intron | 15.0% |
| !!! | ATATAAAAAGTGCAAATTTA+GGG | + | chr8_2:25042592-25042611 | None:intergenic | 15.0% |
| !!! | TATATAAAAAGTGCAAATTT+AGG | + | chr8_2:25042593-25042612 | None:intergenic | 15.0% |
| !!! | AAATTTGCACTTTTTATATA+TGG | - | chr8_2:25042593-25042612 | Msa1241460:intron | 15.0% |
| !!! | AATTTGCACTTTTTATATAT+GGG | - | chr8_2:25042594-25042613 | Msa1241460:intron | 15.0% |
| !!! | TTTTTAGACATATATAACAA+GGG | + | chr8_2:25042668-25042687 | None:intergenic | 15.0% |
| !!! | TTTTTTAGACATATATAACA+AGG | + | chr8_2:25042669-25042688 | None:intergenic | 15.0% |
| !! | AGTTGTTTGTGATTATAATA+AGG | - | chr8_2:25039062-25039081 | Msa1241460:three_prime_UTR | 20.0% |
| !!! | TTCTTTATTTCTACAACAAA+AGG | - | chr8_2:25039283-25039302 | Msa1241460:intron | 20.0% |
| !! | TACAACAAAAGGTAAAAATA+AGG | - | chr8_2:25039294-25039313 | Msa1241460:intron | 20.0% |
| !!! | TATATTTTTTACAACACCAA+CGG | + | chr8_2:25039765-25039784 | None:intergenic | 20.0% |
| !! | TCTATGAAATTAACAAAAGT+AGG | + | chr8_2:25039832-25039851 | None:intergenic | 20.0% |
| !! | CATTTAAGTACAATAATGTT+CGG | - | chr8_2:25039925-25039944 | Msa1241460:intron | 20.0% |
| !!! | GCTGATATTTTTTATTTTTG+AGG | - | chr8_2:25040091-25040110 | Msa1241460:intron | 20.0% |
| !! | TAATCATTACAAGAAATAAG+CGG | + | chr8_2:25040467-25040486 | None:intergenic | 20.0% |
| !! | TATTTCTTGTAATGATTAAC+AGG | - | chr8_2:25040469-25040488 | Msa1241460:intron | 20.0% |
| !!! | GAAATTTTTCAAATTTTCTG+AGG | - | chr8_2:25041126-25041145 | Msa1241460:intron | 20.0% |
| !! | AGTATTATAACATCATAGAT+TGG | - | chr8_2:25041206-25041225 | Msa1241460:intron | 20.0% |
| !!! | TAGAAAAAATGTCATTTAGA+AGG | - | chr8_2:25041791-25041810 | Msa1241460:intron | 20.0% |
| !! | CGATAATATACAAAATACAA+GGG | + | chr8_2:25041986-25042005 | None:intergenic | 20.0% |
| !! | ACGATAATATACAAAATACA+AGG | + | chr8_2:25041987-25042006 | None:intergenic | 20.0% |
| !! | TAAATAAACTCCATATCTTT+GGG | + | chr8_2:25042295-25042314 | None:intergenic | 20.0% |
| !!! | TCAGAGTTAGATATAATTTT+AGG | - | chr8_2:25042925-25042944 | Msa1241460:five_prime_UTR | 20.0% |
| !! | TTAAGTTGTTTATCCAAACA+AGG | + | chr8_2:25039088-25039107 | None:intergenic | 25.0% |
| !! | ATTGACTTTGACTTATTTCT+TGG | - | chr8_2:25039131-25039150 | Msa1241460:exon | 25.0% |
| ! | ATTCAAGATAACATTAGCAT+AGG | + | chr8_2:25039599-25039618 | None:intergenic | 25.0% |
| ! | TGCTAATGTTATCTTGAATT+TGG | - | chr8_2:25039600-25039619 | Msa1241460:intron | 25.0% |
| ! | TAAATGATCTCATCAATTGA+TGG | - | chr8_2:25039730-25039749 | Msa1241460:intron | 25.0% |
| ! | AAATGATCTCATCAATTGAT+GGG | - | chr8_2:25039731-25039750 | Msa1241460:intron | 25.0% |
| ! | ACACATGTTTGATAAAAAAC+AGG | - | chr8_2:25039988-25040007 | Msa1241460:CDS | 25.0% |
| ! | CACATGTTTGATAAAAAACA+GGG | - | chr8_2:25039989-25040008 | Msa1241460:CDS | 25.0% |
| ! | ACATGTTTGATAAAAAACAG+GGG | - | chr8_2:25039990-25040009 | Msa1241460:CDS | 25.0% |
| !!! | CTCTCTTTTCATTGATTTAA+GGG | + | chr8_2:25040669-25040688 | None:intergenic | 25.0% |
| !!! | ACTCTCTTTTCATTGATTTA+AGG | + | chr8_2:25040670-25040689 | None:intergenic | 25.0% |
| ! | AAGTTACTCTTACATTTCAT+AGG | + | chr8_2:25040708-25040727 | None:intergenic | 25.0% |
| !! | TGATCACTCAACATATTTTA+AGG | + | chr8_2:25040778-25040797 | None:intergenic | 25.0% |
| ! | TCCATTGAAAATGTAGAAAA+AGG | - | chr8_2:25040951-25040970 | Msa1241460:intron | 25.0% |
| ! | GTAAATTCCCAATAAAATTC+AGG | + | chr8_2:25040992-25041011 | None:intergenic | 25.0% |
| ! | TAAGTAAAAAAGACACTCTA+AGG | - | chr8_2:25041033-25041052 | Msa1241460:intron | 25.0% |
| !!! | GATCAATGCACTTTTAATTT+TGG | - | chr8_2:25041182-25041201 | Msa1241460:intron | 25.0% |
| ! | ATAACATCATAGATTGGATT+TGG | - | chr8_2:25041212-25041231 | Msa1241460:intron | 25.0% |
| ! | TGGGAACTAAAAAATTGTAT+CGG | + | chr8_2:25041260-25041279 | None:intergenic | 25.0% |
| ! | AGAAGGAAAGAAAAAAAAGA+AGG | + | chr8_2:25041352-25041371 | None:intergenic | 25.0% |
| ! | GTTAATAACTATGGTGATAA+CGG | + | chr8_2:25041419-25041438 | None:intergenic | 25.0% |
| ! | CACATATCAGTTAATAACTA+TGG | + | chr8_2:25041428-25041447 | None:intergenic | 25.0% |
| !! | TGTACTAAGTTCTTTTACAT+CGG | - | chr8_2:25041449-25041468 | Msa1241460:intron | 25.0% |
| ! | GCATTTCAAAACTAGAAATA+AGG | + | chr8_2:25041723-25041742 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTGAACAAAGAAA+TGG | - | chr8_2:25042057-25042076 | Msa1241460:intron | 25.0% |
| ! | AACAAAGAAATGGCAAAATA+GGG | - | chr8_2:25042067-25042086 | Msa1241460:intron | 25.0% |
| !!! | AAAATTGTTTGGTTTGACAA+TGG | - | chr8_2:25042144-25042163 | Msa1241460:intron | 25.0% |
| ! | CTAAATAAACTCCATATCTT+TGG | + | chr8_2:25042296-25042315 | None:intergenic | 25.0% |
| ! | TAAGTTGCAAAACAATAACT+AGG | + | chr8_2:25042720-25042739 | None:intergenic | 25.0% |
| !!! | TATTGTTTTGCAACTTATGA+TGG | - | chr8_2:25042723-25042742 | Msa1241460:CDS | 25.0% |
| ! | TGATGGTTTCATTTATATCA+AGG | - | chr8_2:25042740-25042759 | Msa1241460:CDS | 25.0% |
| ! | ACTAATGCAATTAAGATCAT+GGG | + | chr8_2:25042769-25042788 | None:intergenic | 25.0% |
| ! | AACTAATGCAATTAAGATCA+TGG | + | chr8_2:25042770-25042789 | None:intergenic | 25.0% |
| !!! | GAACGATACATAGTTTTATA+AGG | + | chr8_2:25042951-25042970 | None:intergenic | 25.0% |
| ! | GGTTTGTTTGTTACTTACTT+AGG | + | chr8_2:25038800-25038819 | None:intergenic | 30.0% |
| AGGAAGAAGAAGAATAAGAA+GGG | + | chr8_2:25038849-25038868 | None:intergenic | 30.0% | |
| TCATATGAACCAACTAAACT+AGG | + | chr8_2:25039043-25039062 | None:intergenic | 30.0% | |
| !! | GATTATAATAAGGCCTTGTT+TGG | - | chr8_2:25039072-25039091 | Msa1241460:three_prime_UTR | 30.0% |
| CTACATGTATAAACACTAGT+GGG | + | chr8_2:25039419-25039438 | None:intergenic | 30.0% | |
| TCTACATGTATAAACACTAG+TGG | + | chr8_2:25039420-25039439 | None:intergenic | 30.0% | |
| TTGTCAATTGTGATCTCTAA+AGG | - | chr8_2:25039538-25039557 | Msa1241460:intron | 30.0% | |
| AATGTTATCTTGAATTTGGC+TGG | - | chr8_2:25039604-25039623 | Msa1241460:intron | 30.0% | |
| AAGCTTAATAAAGCAGTATC+TGG | - | chr8_2:25039851-25039870 | Msa1241460:intron | 30.0% | |
| GTACTTAAATGACCAACATT+TGG | + | chr8_2:25039916-25039935 | None:intergenic | 30.0% | |
| TTTATCCAATCAATACAACC+AGG | + | chr8_2:25039953-25039972 | None:intergenic | 30.0% | |
| CATGTTTGATAAAAAACAGG+GGG | - | chr8_2:25039991-25040010 | Msa1241460:CDS | 30.0% | |
| ATGTTTGATAAAAAACAGGG+GGG | - | chr8_2:25039992-25040011 | Msa1241460:CDS | 30.0% | |
| !!! | AACTGTTGACTTTTGTCAAA+TGG | - | chr8_2:25040188-25040207 | Msa1241460:intron | 30.0% |
| !! | AGTTCTTTAAAGTTCATCCA+GGG | + | chr8_2:25040354-25040373 | None:intergenic | 30.0% |
| !! | AAGTTCTTTAAAGTTCATCC+AGG | + | chr8_2:25040355-25040374 | None:intergenic | 30.0% |
| AACAATTAAGAAGGGACAAA+GGG | + | chr8_2:25040538-25040557 | None:intergenic | 30.0% | |
| AAAGAGAGTAAATTAGTGAG+TGG | - | chr8_2:25040681-25040700 | Msa1241460:intron | 30.0% | |
| AAATATGTTGAGTGATCAGA+AGG | - | chr8_2:25040780-25040799 | Msa1241460:intron | 30.0% | |
| ATCATATTTAGTGCAACATC+AGG | - | chr8_2:25040904-25040923 | Msa1241460:intron | 30.0% | |
| ! | GCCTTTTTCTACATTTTCAA+TGG | + | chr8_2:25040955-25040974 | None:intergenic | 30.0% |
| AAATGTAGAAAAAGGCTTGT+AGG | - | chr8_2:25040959-25040978 | Msa1241460:intron | 30.0% | |
| TAAAAAATTGTATCGGAGGA+AGG | + | chr8_2:25041253-25041272 | None:intergenic | 30.0% | |
| GAACTAAAAAATTGTATCGG+AGG | + | chr8_2:25041257-25041276 | None:intergenic | 30.0% | |
| TGGAAATTATAGAGCTCTTT+GGG | + | chr8_2:25041323-25041342 | None:intergenic | 30.0% | |
| GAAAAAAAAGAAGGAAGAAG+TGG | + | chr8_2:25041343-25041362 | None:intergenic | 30.0% | |
| !!! | GTTCTGTTTTTGTTATCAGA+TGG | - | chr8_2:25041548-25041567 | Msa1241460:intron | 30.0% |
| CATGCAAGAATAGTACTAAA+TGG | + | chr8_2:25041909-25041928 | None:intergenic | 30.0% | |
| GAACAAAGAAATGGCAAAAT+AGG | - | chr8_2:25042066-25042085 | Msa1241460:intron | 30.0% | |
| AATGCAGATTCTCTTATGTT+TGG | + | chr8_2:25042328-25042347 | None:intergenic | 30.0% | |
| AACATAAGAGAATCTGCATT+TGG | - | chr8_2:25042328-25042347 | Msa1241460:intron | 30.0% | |
| ACATAAGAGAATCTGCATTT+GGG | - | chr8_2:25042329-25042348 | Msa1241460:intron | 30.0% | |
| TAACTTCCATCTTAATCAGA+TGG | - | chr8_2:25042503-25042522 | Msa1241460:intron | 30.0% | |
| ! | TGAAAATGTGTTTGTTGACT+AGG | - | chr8_2:25042798-25042817 | Msa1241460:CDS | 30.0% |
| ! | GAAAATGTGTTTGTTGACTA+GGG | - | chr8_2:25042799-25042818 | Msa1241460:CDS | 30.0% |
| TATGGATATAGCATGTGTTA+GGG | - | chr8_2:25042827-25042846 | Msa1241460:CDS | 30.0% | |
| ATGTGTTAGGGAAAACTATT+GGG | - | chr8_2:25042839-25042858 | Msa1241460:exon | 30.0% | |
| TTTACATCCATGAACTTAGT+CGG | + | chr8_2:25042874-25042893 | None:intergenic | 30.0% | |
| ! | ACTATGTATCGTTCAAGTTT+AGG | - | chr8_2:25042957-25042976 | Msa1241460:five_prime_UTR | 30.0% |
| ! | CTATGTATCGTTCAAGTTTA+GGG | - | chr8_2:25042958-25042977 | Msa1241460:five_prime_UTR | 30.0% |
| GAGGAAGAAGAAGAATAAGA+AGG | + | chr8_2:25038850-25038869 | None:intergenic | 35.0% | |
| !! | TTCACTGTTCTAGAATCTTC+CGG | - | chr8_2:25038876-25038895 | Msa1241460:three_prime_UTR | 35.0% |
| CTAAACTAGGAATACCTGTT+TGG | + | chr8_2:25039030-25039049 | None:intergenic | 35.0% | |
| ACAGGTATTCCTAGTTTAGT+TGG | - | chr8_2:25039031-25039050 | Msa1241460:three_prime_UTR | 35.0% | |
| TTAACAACTATGAGCCTGTT+TGG | - | chr8_2:25039108-25039127 | Msa1241460:three_prime_UTR | 35.0% | |
| AAGTCAAAGTCAATCCAAAC+AGG | + | chr8_2:25039125-25039144 | None:intergenic | 35.0% | |
| TGGTTTGATTCTTGGTTAGT+TGG | - | chr8_2:25039871-25039890 | Msa1241460:intron | 35.0% | |
| ! | CATTTGGAGGAACACAATTT+TGG | + | chr8_2:25039900-25039919 | None:intergenic | 35.0% |
| AATTGTGTTCCTCCAAATGT+TGG | - | chr8_2:25039901-25039920 | Msa1241460:intron | 35.0% | |
| CTTAAATGACCAACATTTGG+AGG | + | chr8_2:25039913-25039932 | None:intergenic | 35.0% | |
| TGTTTGATAAAAAACAGGGG+GGG | - | chr8_2:25039993-25040012 | Msa1241460:CDS | 35.0% | |
| GGGGGGGATATTAATAAATT+GGG | - | chr8_2:25040012-25040031 | Msa1241460:CDS | 35.0% | |
| GCTCTAATGTACTTGTTTAC+TGG | - | chr8_2:25040065-25040084 | Msa1241460:CDS | 35.0% | |
| TCGTCGAATTGAAAGTAAGA+CGG | + | chr8_2:25040145-25040164 | None:intergenic | 35.0% | |
| AGATCTGAAGAGGTAAATGA+TGG | + | chr8_2:25040411-25040430 | None:intergenic | 35.0% | |
| TCATTTACCTCTTCAGATCT+TGG | - | chr8_2:25040411-25040430 | Msa1241460:intron | 35.0% | |
| ! | TTCAGATCTTGGTGTGATAA+AGG | - | chr8_2:25040422-25040441 | Msa1241460:intron | 35.0% |
| ! | TCAGATCTTGGTGTGATAAA+GGG | - | chr8_2:25040423-25040442 | Msa1241460:intron | 35.0% |
| AATAAGCGGTCTACACAAAA+TGG | + | chr8_2:25040453-25040472 | None:intergenic | 35.0% | |
| ! | TTAACAGGCTAGCCATTAAT+AGG | - | chr8_2:25040484-25040503 | Msa1241460:intron | 35.0% |
| ! | TAACAGGCTAGCCATTAATA+GGG | - | chr8_2:25040485-25040504 | Msa1241460:intron | 35.0% |
| !! | CATTAATAGGGGTGTTTGAA+GGG | - | chr8_2:25040497-25040516 | Msa1241460:intron | 35.0% |
| !! | ATTAATAGGGGTGTTTGAAG+GGG | - | chr8_2:25040498-25040517 | Msa1241460:intron | 35.0% |
| CAACAATTAAGAAGGGACAA+AGG | + | chr8_2:25040539-25040558 | None:intergenic | 35.0% | |
| !! | CAACAATTTTGGCAACTTGT+TGG | + | chr8_2:25040806-25040825 | None:intergenic | 35.0% |
| !! | ATCCTGCTTTAAAGTGAACT+TGG | - | chr8_2:25040839-25040858 | Msa1241460:intron | 35.0% |
| !! | TCCTGCTTTAAAGTGAACTT+GGG | - | chr8_2:25040840-25040859 | Msa1241460:intron | 35.0% |
| ! | TTGGGAGATAGTGTTTGTTT+TGG | - | chr8_2:25040858-25040877 | Msa1241460:intron | 35.0% |
| !!! | ATAGTGTTTGTTTTGGTCAG+AGG | - | chr8_2:25040865-25040884 | Msa1241460:intron | 35.0% |
| !!! | TTTTTTAGTTCCCACAGTTG+AGG | - | chr8_2:25041266-25041285 | Msa1241460:CDS | 35.0% |
| !!! | TTTTTAGTTCCCACAGTTGA+GGG | - | chr8_2:25041267-25041286 | Msa1241460:CDS | 35.0% |
| AAATTATAGAGCTCTTTGGG+GGG | + | chr8_2:25041320-25041339 | None:intergenic | 35.0% | |
| GAAATTATAGAGCTCTTTGG+GGG | + | chr8_2:25041321-25041340 | None:intergenic | 35.0% | |
| GGAAATTATAGAGCTCTTTG+GGG | + | chr8_2:25041322-25041341 | None:intergenic | 35.0% | |
| GTGGAAATTATAGAGCTCTT+TGG | + | chr8_2:25041324-25041343 | None:intergenic | 35.0% | |
| !! | TAACTATGGTGATAACGGTT+AGG | + | chr8_2:25041414-25041433 | None:intergenic | 35.0% |
| TTGCTGTACATTTGAACTTC+AGG | - | chr8_2:25041501-25041520 | Msa1241460:intron | 35.0% | |
| AAAAACAGAACAGCAGAATG+TGG | + | chr8_2:25041539-25041558 | None:intergenic | 35.0% | |
| TTGCTTAGAGATAATGCAAG+CGG | - | chr8_2:25042013-25042032 | Msa1241460:intron | 35.0% | |
| AGAAATGGCAAAATAGGGTA+AGG | - | chr8_2:25042072-25042091 | Msa1241460:intron | 35.0% | |
| AGCTATGTATTCTTGCGATT+AGG | - | chr8_2:25042261-25042280 | Msa1241460:intron | 35.0% | |
| !!! | TGTTGGTTTTTCATCACTGA+TGG | - | chr8_2:25042362-25042381 | Msa1241460:intron | 35.0% |
| CTTGAGAAGCAAGTTAAACT+TGG | + | chr8_2:25042424-25042443 | None:intergenic | 35.0% | |
| !! | CAAGTTTAACTTGCTTCTCA+AGG | - | chr8_2:25042422-25042441 | Msa1241460:intron | 35.0% |
| ACAGAAAGAAGAGAAGTTCA+AGG | - | chr8_2:25042455-25042474 | Msa1241460:intron | 35.0% | |
| ! | TTGTTGACTAGGGATTACTA+TGG | - | chr8_2:25042809-25042828 | Msa1241460:CDS | 35.0% |
| CTATGGATATAGCATGTGTT+AGG | - | chr8_2:25042826-25042845 | Msa1241460:CDS | 35.0% | |
| CATGTGTTAGGGAAAACTAT+TGG | - | chr8_2:25042838-25042857 | Msa1241460:exon | 35.0% | |
| GACTAAGTTCATGGATGTAA+AGG | - | chr8_2:25042873-25042892 | Msa1241460:five_prime_UTR | 35.0% | |
| CGGAGACAAAGCAATACATA+CGG | - | chr8_2:25038716-25038735 | Msa1241460:three_prime_UTR | 40.0% | |
| TGGTTTAACGCAGTAGTGTT+GGG | + | chr8_2:25038759-25038778 | None:intergenic | 40.0% | |
| TTGGTTTAACGCAGTAGTGT+TGG | + | chr8_2:25038760-25038779 | None:intergenic | 40.0% | |
| ! | GGAATGAAAGAAGTGTGCTT+TGG | + | chr8_2:25038779-25038798 | None:intergenic | 40.0% |
| CTAGAACAGTGAATATAGCG+AGG | + | chr8_2:25038869-25038888 | None:intergenic | 40.0% | |
| ! | TCGAGAGAATTTTCAGAGCT+GGG | + | chr8_2:25038966-25038985 | None:intergenic | 40.0% |
| ! | TTCGAGAGAATTTTCAGAGC+TGG | + | chr8_2:25038967-25038986 | None:intergenic | 40.0% |
| TGATCAACACAACACCAAAC+AGG | - | chr8_2:25039013-25039032 | Msa1241460:three_prime_UTR | 40.0% | |
| TAAACACTAGTGGGACTGTT+TGG | + | chr8_2:25039410-25039429 | None:intergenic | 40.0% | |
| ACATTGTGCTTATGCTTGCT+TGG | - | chr8_2:25039643-25039662 | Msa1241460:intron | 40.0% | |
| CATTGTGCTTATGCTTGCTT+GGG | - | chr8_2:25039644-25039663 | Msa1241460:intron | 40.0% | |
| AGATCATAGCCTCTTCAAGT+GGG | - | chr8_2:25039667-25039686 | Msa1241460:intron | 40.0% | |
| AAACCAAATCCCACTTGAAG+AGG | + | chr8_2:25039679-25039698 | None:intergenic | 40.0% | |
| TTGATGGGAAAATCAACCGT+TGG | - | chr8_2:25039746-25039765 | Msa1241460:intron | 40.0% | |
| ! | GCAGTATCTGGTTTGATTCT+TGG | - | chr8_2:25039863-25039882 | Msa1241460:intron | 40.0% |
| GTACAATAATGTTCGGAACC+TGG | - | chr8_2:25039932-25039951 | Msa1241460:intron | 40.0% | |
| GTTTGATAAAAAACAGGGGG+GGG | - | chr8_2:25039994-25040013 | Msa1241460:CDS | 40.0% | |
| TTTGATAAAAAACAGGGGGG+GGG | - | chr8_2:25039995-25040014 | Msa1241460:CDS | 40.0% | |
| GGGGGGGGATATTAATAAAT+TGG | - | chr8_2:25040011-25040030 | Msa1241460:CDS | 40.0% | |
| CGTCGAATTGAAAGTAAGAC+GGG | + | chr8_2:25040144-25040163 | None:intergenic | 40.0% | |
| ! | GGTGTTGTAGAATTCACTTC+TGG | - | chr8_2:25040209-25040228 | Msa1241460:intron | 40.0% |
| AGATCTATGAAGCCAAAGTC+TGG | - | chr8_2:25040322-25040341 | Msa1241460:intron | 40.0% | |
| GATCTATGAAGCCAAAGTCT+GGG | - | chr8_2:25040323-25040342 | Msa1241460:intron | 40.0% | |
| TATCACACCAAGATCTGAAG+AGG | + | chr8_2:25040421-25040440 | None:intergenic | 40.0% | |
| ! | AACAGGCTAGCCATTAATAG+GGG | - | chr8_2:25040486-25040505 | Msa1241460:intron | 40.0% |
| CCTTCAAACACCCCTATTAA+TGG | + | chr8_2:25040499-25040518 | None:intergenic | 40.0% | |
| !! | CCATTAATAGGGGTGTTTGA+AGG | - | chr8_2:25040496-25040515 | Msa1241460:intron | 40.0% |
| !! | ATGATGACGCGCAACAATTT+TGG | + | chr8_2:25040817-25040836 | None:intergenic | 40.0% |
| !! | TCCCAAGTTCACTTTAAAGC+AGG | + | chr8_2:25040844-25040863 | None:intergenic | 40.0% |
| !!! | TGTTTGTTTTGGTCAGAGGT+TGG | - | chr8_2:25040869-25040888 | Msa1241460:intron | 40.0% |
| ! | AGCGAGGCCTGAATTTTATT+GGG | - | chr8_2:25040982-25041001 | Msa1241460:intron | 40.0% |
| TTTGGAGGGATGAGATTAGA+GGG | - | chr8_2:25041094-25041113 | Msa1241460:intron | 40.0% | |
| ! | TTGTATCGGAGGAAGGTTTT+GGG | + | chr8_2:25041246-25041265 | None:intergenic | 40.0% |
| ! | ATTGTATCGGAGGAAGGTTT+TGG | + | chr8_2:25041247-25041266 | None:intergenic | 40.0% |
| !!! | TTTTAGTTCCCACAGTTGAG+GGG | - | chr8_2:25041268-25041287 | Msa1241460:CDS | 40.0% |
| ATAACGGTTAGGCTCTGTTT+GGG | + | chr8_2:25041403-25041422 | None:intergenic | 40.0% | |
| ATGCCACGTGATTGAATTGT+TGG | - | chr8_2:25041739-25041758 | Msa1241460:intron | 40.0% | |
| CAACCAACAATTCAATCACG+TGG | + | chr8_2:25041745-25041764 | None:intergenic | 40.0% | |
| ACATGCTCACGCAGTAAAAA+TGG | + | chr8_2:25041960-25041979 | None:intergenic | 40.0% | |
| TTAGAGATAATGCAAGCGGA+TGG | - | chr8_2:25042017-25042036 | Msa1241460:intron | 40.0% | |
| TAGAGATAATGCAAGCGGAT+GGG | - | chr8_2:25042018-25042037 | Msa1241460:intron | 40.0% | |
| GGATGTCTAAATTGTTGTGC+AGG | - | chr8_2:25042383-25042402 | Msa1241460:intron | 40.0% | |
| AGAAGAGAAGTTCAAGGTAG+AGG | - | chr8_2:25042461-25042480 | Msa1241460:intron | 40.0% | |
| CTGCTTCCATCTGATTAAGA+TGG | + | chr8_2:25042512-25042531 | None:intergenic | 40.0% | |
| CCAAGCTTAATAGTAGGACT+AGG | + | chr8_2:25042541-25042560 | None:intergenic | 40.0% | |
| CCTAGTCCTACTATTAAGCT+TGG | - | chr8_2:25042538-25042557 | Msa1241460:intron | 40.0% | |
| CTGTGACCAAGCTTAATAGT+AGG | + | chr8_2:25042547-25042566 | None:intergenic | 40.0% | |
| CTTGGTCACAGTAGCATTAT+AGG | - | chr8_2:25042556-25042575 | Msa1241460:intron | 40.0% | |
| TCAGTGCTTTCTTTATGCCT+TGG | - | chr8_2:25042694-25042713 | Msa1241460:CDS | 40.0% | |
| GCAAAACAATAACTAGGCCA+AGG | + | chr8_2:25042714-25042733 | None:intergenic | 40.0% | |
| TGTTAGGGAAAACTATTGGG+AGG | - | chr8_2:25042842-25042861 | Msa1241460:exon | 40.0% | |
| GGCTTCGAAACTAAGCAACA+CGG | - | chr8_2:25038696-25038715 | Msa1241460:three_prime_UTR | 45.0% | |
| TAAGAAGGGAAGAAGCGAAG+TGG | + | chr8_2:25038835-25038854 | None:intergenic | 45.0% | |
| ATCGAAATCGGAACAGTGAC+CGG | + | chr8_2:25038898-25038917 | None:intergenic | 45.0% | |
| CATTTGCGCGTGATCGAAAT+CGG | + | chr8_2:25038910-25038929 | None:intergenic | 45.0% | |
| ! | GAGAGAATTTTCAGAGCTGG+GGG | + | chr8_2:25038964-25038983 | None:intergenic | 45.0% |
| ! | CGAGAGAATTTTCAGAGCTG+GGG | + | chr8_2:25038965-25038984 | None:intergenic | 45.0% |
| TGTGATGCTTGAGGTCAGTT+TGG | + | chr8_2:25039462-25039481 | None:intergenic | 45.0% | |
| ATAGACACGTGTGATGCTTG+AGG | + | chr8_2:25039471-25039490 | None:intergenic | 45.0% | |
| GAGATCATAGCCTCTTCAAG+TGG | - | chr8_2:25039666-25039685 | Msa1241460:intron | 45.0% | |
| TAGCCTCTTCAAGTGGGATT+TGG | - | chr8_2:25039673-25039692 | Msa1241460:intron | 45.0% | |
| CAAAAGTAGGCAGTCTTAGC+AGG | + | chr8_2:25039819-25039838 | None:intergenic | 45.0% | |
| ! | CGGAACCTGGTTGTATTGAT+TGG | - | chr8_2:25039945-25039964 | Msa1241460:intron | 45.0% |
| TTGATAAAAAACAGGGGGGG+GGG | - | chr8_2:25039996-25040015 | Msa1241460:CDS | 45.0% | |
| !! | ATTCACTTCTGGAGTTCGCA+AGG | - | chr8_2:25040220-25040239 | Msa1241460:intron | 45.0% |
| !! | TTCACTTCTGGAGTTCGCAA+GGG | - | chr8_2:25040221-25040240 | Msa1241460:intron | 45.0% |
| ACTGCATCATCTTACTCTCG+AGG | - | chr8_2:25040278-25040297 | Msa1241460:intron | 45.0% | |
| TACTCTCGAGGCTATAGATG+CGG | - | chr8_2:25040290-25040309 | Msa1241460:intron | 45.0% | |
| CTTACTGAGTTCAAGCATGC+TGG | - | chr8_2:25040372-25040391 | Msa1241460:intron | 45.0% | |
| ! | GAGCGAGGCCTGAATTTTAT+TGG | - | chr8_2:25040981-25041000 | Msa1241460:intron | 45.0% |
| !! | AGACACTCTAAGGCTCTGTT+TGG | - | chr8_2:25041043-25041062 | Msa1241460:intron | 45.0% |
| !! | GACACTCTAAGGCTCTGTTT+GGG | - | chr8_2:25041044-25041063 | Msa1241460:intron | 45.0% |
| GCTCTGTTTGGGAGTTTGTA+GGG | - | chr8_2:25041055-25041074 | Msa1241460:intron | 45.0% | |
| CTCTGTTTGGGAGTTTGTAG+GGG | - | chr8_2:25041056-25041075 | Msa1241460:intron | 45.0% | |
| ! | CTTTGGAGGGATGAGATTAG+AGG | - | chr8_2:25041093-25041112 | Msa1241460:intron | 45.0% |
| ! | TTTAGTTCCCACAGTTGAGG+GGG | - | chr8_2:25041269-25041288 | Msa1241460:CDS | 45.0% |
| ACAAAATCCCCCTCAACTGT+GGG | + | chr8_2:25041279-25041298 | None:intergenic | 45.0% | |
| AACAAAATCCCCCTCAACTG+TGG | + | chr8_2:25041280-25041299 | None:intergenic | 45.0% | |
| TTAGGCTCTGTTTGGGAGTT+TGG | + | chr8_2:25041396-25041415 | None:intergenic | 45.0% | |
| ! | GATAACGGTTAGGCTCTGTT+TGG | + | chr8_2:25041404-25041423 | None:intergenic | 45.0% |
| TTGCTGCATCCTGAACTTGA+GGG | + | chr8_2:25041610-25041629 | None:intergenic | 45.0% | |
| TTTGCTGCATCCTGAACTTG+AGG | + | chr8_2:25041611-25041630 | None:intergenic | 45.0% | |
| ! | CTCATAGGGCACTAGTGAAT+TGG | + | chr8_2:25041663-25041682 | None:intergenic | 45.0% |
| GAAACCTCATGGAGCTCATA+GGG | + | chr8_2:25041677-25041696 | None:intergenic | 45.0% | |
| AGAAACCTCATGGAGCTCAT+AGG | + | chr8_2:25041678-25041697 | None:intergenic | 45.0% | |
| AGAGATAATGCAAGCGGATG+GGG | - | chr8_2:25042019-25042038 | Msa1241460:intron | 45.0% | |
| GGACACTGTTCCCAAAGATA+TGG | - | chr8_2:25042282-25042301 | Msa1241460:intron | 45.0% | |
| ATTTGGGCTGCTAAGCTTGT+TGG | - | chr8_2:25042345-25042364 | Msa1241460:intron | 45.0% | |
| ACTTGCTTCTCAAGGTCAAG+CGG | - | chr8_2:25042430-25042449 | Msa1241460:intron | 45.0% | |
| GAGGTGCACAAGAATAACGA+AGG | - | chr8_2:25042480-25042499 | Msa1241460:intron | 45.0% | |
| !! | GCTTGTACCGACTAAGTTCA+TGG | - | chr8_2:25042864-25042883 | Msa1241460:five_prime_UTR | 45.0% |
| !!! | TAATTTTTTGTTTATATTTT+CGG | - | chr8_2:25041765-25041784 | Msa1241460:intron | 5.0% |
| GCGAAGTGGTTGCTCTCATT+AGG | + | chr8_2:25038821-25038840 | None:intergenic | 50.0% | |
| CGATTTCGATCACGCGCAAA+TGG | - | chr8_2:25038908-25038927 | Msa1241460:three_prime_UTR | 50.0% | |
| CTAGTGGGACTGTTTGGAAG+AGG | + | chr8_2:25039404-25039423 | None:intergenic | 50.0% | |
| ACTCTCGAGGCTATAGATGC+GGG | - | chr8_2:25040291-25040310 | Msa1241460:intron | 50.0% | |
| ! | CCAGGGTTTTACCCAGACTT+TGG | + | chr8_2:25040337-25040356 | None:intergenic | 50.0% |
| CCAAAGTCTGGGTAAAACCC+TGG | - | chr8_2:25040334-25040353 | Msa1241460:intron | 50.0% | |
| GAGTTCAAGCATGCTGGTGA+TGG | - | chr8_2:25040378-25040397 | Msa1241460:intron | 50.0% | |
| GAAAAAGGCTTGTAGGAGCG+AGG | - | chr8_2:25040966-25040985 | Msa1241460:intron | 50.0% | |
| GGCTCTGTTTGGGAGTTTGT+AGG | - | chr8_2:25041054-25041073 | Msa1241460:intron | 50.0% | |
| TGTTTGGGAGTTTGTAGGGG+AGG | - | chr8_2:25041059-25041078 | Msa1241460:intron | 50.0% | |
| GTTTGGGAGTTTGTAGGGGA+GGG | - | chr8_2:25041060-25041079 | Msa1241460:intron | 50.0% | |
| TTTGGGAGTTTGTAGGGGAG+GGG | - | chr8_2:25041061-25041080 | Msa1241460:intron | 50.0% | |
| CTCTGTTTGGGAGTTTGGAG+GGG | + | chr8_2:25041391-25041410 | None:intergenic | 50.0% | |
| GCTCTGTTTGGGAGTTTGGA+GGG | + | chr8_2:25041392-25041411 | None:intergenic | 50.0% | |
| TTATCAGATGGCCACAAGCC+AGG | - | chr8_2:25041560-25041579 | Msa1241460:intron | 50.0% | |
| TGAACTTGAGGGTCATGTGC+TGG | + | chr8_2:25041599-25041618 | None:intergenic | 50.0% | |
| AGCACATGACCCTCAAGTTC+AGG | - | chr8_2:25041598-25041617 | Msa1241460:intron | 50.0% | |
| CTGTTAAGACCATCCAGCAG+AGG | - | chr8_2:25041636-25041655 | Msa1241460:intron | 50.0% | |
| TGAATTGGACCTCTGCTGGA+TGG | + | chr8_2:25041648-25041667 | None:intergenic | 50.0% | |
| CTAGTGAATTGGACCTCTGC+TGG | + | chr8_2:25041652-25041671 | None:intergenic | 50.0% | |
| CCTTCGCATCAGAAACCTCA+TGG | + | chr8_2:25041688-25041707 | None:intergenic | 50.0% | |
| CCATGAGGTTTCTGATGCGA+AGG | - | chr8_2:25041685-25041704 | Msa1241460:intron | 50.0% | |
| GAAACAGACTCGTGCATAGC+TGG | - | chr8_2:25042096-25042115 | Msa1241460:intron | 50.0% | |
| CTTGCTTCTCAAGGTCAAGC+GGG | - | chr8_2:25042431-25042450 | Msa1241460:intron | 50.0% | |
| TTGCTTCTCAAGGTCAAGCG+GGG | - | chr8_2:25042432-25042451 | Msa1241460:intron | 50.0% | |
| AGTAGCATTATAGGCCTGCG+TGG | - | chr8_2:25042565-25042584 | Msa1241460:intron | 50.0% | |
| ! | TGCAAATTTAGGGTCCACGC+AGG | + | chr8_2:25042582-25042601 | None:intergenic | 50.0% |
| GGGAATCGTGAATACCTCCG+GGG | + | chr8_2:25038944-25038963 | None:intergenic | 55.0% | |
| GGGGAATCGTGAATACCTCC+GGG | + | chr8_2:25038945-25038964 | None:intergenic | 55.0% | |
| GGGGGAATCGTGAATACCTC+CGG | + | chr8_2:25038946-25038965 | None:intergenic | 55.0% | |
| !! | ACTTCTGGAGTTCGCAAGGG+TGG | - | chr8_2:25040224-25040243 | Msa1241460:intron | 55.0% |
| TCGCAAGGGTGGTGAAAGCA+CGG | - | chr8_2:25040235-25040254 | Msa1241460:intron | 55.0% | |
| GAGTTTGGAGGGGAAGAGAG+GGG | + | chr8_2:25041381-25041400 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGGAAGAGA+GGG | + | chr8_2:25041382-25041401 | None:intergenic | 55.0% | |
| GGCTCTGTTTGGGAGTTTGG+AGG | + | chr8_2:25041393-25041412 | None:intergenic | 55.0% | |
| AGTGCCCTATGAGCTCCATG+AGG | - | chr8_2:25041670-25041689 | Msa1241460:intron | 55.0% | |
| GGTTTCTGATGCGAAGGCTG+AGG | - | chr8_2:25041691-25041710 | Msa1241460:intron | 55.0% | |
| CAAATGGCCACTCCACTCCC+CGG | - | chr8_2:25038924-25038943 | Msa1241460:three_prime_UTR | 60.0% | |
| AATACCTCCGGGGAGTGGAG+TGG | + | chr8_2:25038934-25038953 | None:intergenic | 60.0% | |
| TCGTGAATACCTCCGGGGAG+TGG | + | chr8_2:25038939-25038958 | None:intergenic | 60.0% | |
| ! | CGCAAGGGTGGTGAAAGCAC+GGG | - | chr8_2:25040236-25040255 | Msa1241460:intron | 60.0% |
| ! | GGTGGTGAAAGCACGGGAAC+AGG | - | chr8_2:25040242-25040261 | Msa1241460:intron | 60.0% |
| GCACGGGAACAGGTTGTTGC+TGG | - | chr8_2:25040252-25040271 | Msa1241460:intron | 60.0% | |
| GGAGTTTGTAGGGGAGGGGA+GGG | - | chr8_2:25041065-25041084 | Msa1241460:intron | 60.0% | |
| GAGTTTGTAGGGGAGGGGAG+GGG | - | chr8_2:25041066-25041085 | Msa1241460:intron | 60.0% | |
| GAAGAGAGGGGAGGGCTAGA+AGG | + | chr8_2:25041369-25041388 | None:intergenic | 60.0% | |
| TTGGAGGGGAAGAGAGGGGA+GGG | + | chr8_2:25041377-25041396 | None:intergenic | 60.0% | |
| TTTGGAGGGGAAGAGAGGGG+AGG | + | chr8_2:25041378-25041397 | None:intergenic | 60.0% | |
| GGGAGTTTGGAGGGGAAGAG+AGG | + | chr8_2:25041383-25041402 | None:intergenic | 60.0% | |
| CAGATGGCCACAAGCCAGGT+TGG | - | chr8_2:25041564-25041583 | Msa1241460:intron | 60.0% | |
| ! | CCACAAGCCAGGTTGGCAGT+CGG | - | chr8_2:25041571-25041590 | Msa1241460:intron | 60.0% |
| GGGAGTTTGTAGGGGAGGGG+AGG | - | chr8_2:25041064-25041083 | Msa1241460:intron | 65.0% | |
| TTTGTAGGGGAGGGGAGGGG+AGG | - | chr8_2:25041069-25041088 | Msa1241460:intron | 65.0% | |
| TTGTAGGGGAGGGGAGGGGA+GGG | - | chr8_2:25041070-25041089 | Msa1241460:intron | 65.0% | |
| ! | CCGACTGCCAACCTGGCTTG+TGG | + | chr8_2:25041574-25041593 | None:intergenic | 65.0% |
| GCTGGAACCGACTGCCAACC+TGG | + | chr8_2:25041581-25041600 | None:intergenic | 65.0% | |
| ATGGCCACTCCACTCCCCGG+AGG | - | chr8_2:25038927-25038946 | Msa1241460:three_prime_UTR | 70.0% | |
| ! | AGGGGAGGGGAGGGCTTTGG+AGG | - | chr8_2:25041079-25041098 | Msa1241460:intron | 70.0% |
| !! | GGGGAGGGGAGGGCTTTGGA+GGG | - | chr8_2:25041080-25041099 | Msa1241460:intron | 70.0% |
| GGGAGGGGAGGGGAGGGCTT+TGG | - | chr8_2:25041076-25041095 | Msa1241460:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 25038694 | 25042982 | 25038694 | ID=Msa1241460;Name=Msa1241460 |
| chr8_2 | mRNA | 25038694 | 25042982 | 25038694 | ID=Msa1241460-mRNA-1;Parent=Msa1241460;Name=Msa1241460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=128|1|1|1|1|1|4|440|240 |
| chr8_2 | exon | 25038694 | 25039271 | 25038694 | ID=Msa1241460-mRNA-1:exon:8854;Parent=Msa1241460-mRNA-1 |
| chr8_2 | exon | 25039964 | 25040109 | 25039964 | ID=Msa1241460-mRNA-1:exon:8853;Parent=Msa1241460-mRNA-1 |
| chr8_2 | exon | 25041232 | 25041457 | 25041232 | ID=Msa1241460-mRNA-1:exon:8852;Parent=Msa1241460-mRNA-1 |
| chr8_2 | exon | 25042642 | 25042982 | 25042642 | ID=Msa1241460-mRNA-1:exon:8851;Parent=Msa1241460-mRNA-1 |
| chr8_2 | five_prime_UTR | 25042855 | 25042982 | 25042855 | ID=Msa1241460-mRNA-1:five_prime_utr;Parent=Msa1241460-mRNA-1 |
| chr8_2 | CDS | 25042642 | 25042854 | 25042642 | ID=Msa1241460-mRNA-1:cds;Parent=Msa1241460-mRNA-1 |
| chr8_2 | CDS | 25041232 | 25041457 | 25041232 | ID=Msa1241460-mRNA-1:cds;Parent=Msa1241460-mRNA-1 |
| chr8_2 | CDS | 25039964 | 25040109 | 25039964 | ID=Msa1241460-mRNA-1:cds;Parent=Msa1241460-mRNA-1 |
| chr8_2 | CDS | 25039134 | 25039271 | 25039134 | ID=Msa1241460-mRNA-1:cds;Parent=Msa1241460-mRNA-1 |
| chr8_2 | three_prime_UTR | 25038694 | 25039133 | 25038694 | ID=Msa1241460-mRNA-1:three_prime_utr;Parent=Msa1241460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
