Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242110 | XP_003628200.1 | 84.076 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 8.69e-93 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242110 | sp|Q9SSK5|MLP43_ARATH | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 6.64e-22 | 89.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242110 | G7L7T5 | 84.076 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 4.15e-93 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1228190 | Msa1242110 | 0.803910 | 2.781589e-49 | -8.615850e-47 |
| Msa1242110 | Msa1250630 | 0.951435 | 2.057288e-109 | -8.615850e-47 |
| Msa1242110 | Msa1326700 | 0.953007 | 7.046042e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242110 | MtrunA17_Chr8g0355721 | 84.076 | 157 | 24 | 1 | 1 | 157 | 1 | 156 | 7.99e-97 | 276 |
| Msa1242110 | MtrunA17_Chr8g0355661 | 80.255 | 157 | 30 | 1 | 1 | 157 | 1 | 156 | 4.64e-91 | 261 |
| Msa1242110 | MtrunA17_Chr8g0355741 | 76.433 | 157 | 37 | 0 | 1 | 157 | 1 | 157 | 3.77e-89 | 256 |
| Msa1242110 | MtrunA17_Chr8g0355811 | 70.701 | 157 | 45 | 1 | 1 | 157 | 1 | 156 | 2.90e-82 | 239 |
| Msa1242110 | MtrunA17_Chr8g0355781 | 72.368 | 152 | 42 | 0 | 1 | 152 | 1 | 152 | 4.24e-82 | 238 |
| Msa1242110 | MtrunA17_Chr8g0355641 | 69.231 | 156 | 48 | 0 | 1 | 156 | 1 | 156 | 8.10e-80 | 233 |
| Msa1242110 | MtrunA17_Chr8g0355761 | 71.711 | 152 | 43 | 0 | 1 | 152 | 1 | 152 | 1.61e-79 | 232 |
| Msa1242110 | MtrunA17_Chr8g0355821 | 69.032 | 155 | 47 | 1 | 1 | 155 | 1 | 154 | 3.72e-79 | 231 |
| Msa1242110 | MtrunA17_Chr8g0355801 | 68.153 | 157 | 49 | 1 | 1 | 157 | 1 | 156 | 1.46e-77 | 227 |
| Msa1242110 | MtrunA17_Chr8g0355791 | 68.790 | 157 | 48 | 1 | 1 | 157 | 1 | 156 | 3.32e-77 | 226 |
| Msa1242110 | MtrunA17_Chr8g0355771 | 66.879 | 157 | 51 | 1 | 1 | 157 | 1 | 156 | 5.79e-75 | 221 |
| Msa1242110 | MtrunA17_Chr1g0160371 | 43.791 | 153 | 83 | 2 | 1 | 151 | 1 | 152 | 4.73e-39 | 129 |
| Msa1242110 | MtrunA17_Chr1g0160381 | 39.869 | 153 | 89 | 2 | 1 | 151 | 5 | 156 | 3.28e-38 | 127 |
| Msa1242110 | MtrunA17_Chr1g0160391 | 37.821 | 156 | 89 | 4 | 1 | 149 | 1 | 155 | 1.30e-27 | 100 |
| Msa1242110 | MtrunA17_Chr8g0339261 | 33.103 | 145 | 94 | 3 | 6 | 149 | 8 | 150 | 6.20e-25 | 94.0 |
| Msa1242110 | MtrunA17_Chr1g0160801 | 36.486 | 148 | 85 | 4 | 7 | 152 | 7 | 147 | 1.09e-24 | 92.8 |
| Msa1242110 | MtrunA17_Chr1g0160351 | 45.161 | 93 | 49 | 1 | 61 | 151 | 1 | 93 | 1.23e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242110 | AT5G28010.1 | 32.667 | 150 | 98 | 3 | 3 | 150 | 15 | 163 | 2.08e-23 | 90.5 |
| Msa1242110 | AT5G28010.2 | 32.667 | 150 | 98 | 3 | 3 | 150 | 15 | 163 | 2.08e-23 | 90.5 |
| Msa1242110 | AT1G70890.1 | 34.000 | 150 | 96 | 3 | 3 | 150 | 7 | 155 | 6.75e-23 | 89.0 |
| Msa1242110 | AT1G70840.1 | 31.333 | 150 | 100 | 3 | 3 | 150 | 20 | 168 | 1.02e-20 | 83.6 |
| Msa1242110 | AT1G70830.5 | 32.000 | 150 | 99 | 3 | 3 | 150 | 22 | 170 | 1.43e-20 | 83.6 |
| Msa1242110 | AT1G70870.1 | 42.708 | 96 | 54 | 1 | 56 | 151 | 44 | 138 | 1.99e-20 | 82.0 |
| Msa1242110 | AT1G70830.3 | 32.000 | 150 | 99 | 3 | 3 | 150 | 22 | 170 | 2.85e-20 | 83.2 |
| Msa1242110 | AT5G28000.1 | 30.667 | 150 | 101 | 3 | 3 | 150 | 13 | 161 | 9.34e-20 | 80.9 |
| Msa1242110 | AT1G70830.2 | 32.000 | 150 | 99 | 3 | 3 | 150 | 22 | 170 | 9.87e-20 | 82.8 |
| Msa1242110 | AT1G23120.1 | 29.167 | 144 | 97 | 3 | 7 | 150 | 7 | 145 | 1.20e-19 | 80.5 |
| Msa1242110 | AT1G70830.1 | 32.000 | 150 | 99 | 3 | 3 | 150 | 22 | 170 | 2.17e-19 | 83.2 |
| Msa1242110 | AT1G70830.1 | 30.667 | 150 | 101 | 3 | 3 | 150 | 184 | 332 | 7.20e-18 | 79.0 |
| Msa1242110 | AT1G23120.2 | 29.167 | 144 | 97 | 3 | 7 | 150 | 57 | 195 | 2.62e-19 | 80.9 |
| Msa1242110 | AT1G70850.2 | 30.667 | 150 | 101 | 3 | 3 | 150 | 9 | 157 | 1.15e-18 | 79.7 |
| Msa1242110 | AT1G23130.1 | 28.859 | 149 | 104 | 2 | 3 | 150 | 10 | 157 | 2.14e-18 | 77.4 |
| Msa1242110 | AT1G70850.3 | 30.667 | 150 | 101 | 3 | 3 | 150 | 9 | 157 | 2.88e-18 | 80.1 |
| Msa1242110 | AT1G70850.3 | 30.714 | 140 | 94 | 3 | 13 | 150 | 175 | 313 | 9.88e-17 | 75.9 |
| Msa1242110 | AT1G70850.1 | 30.667 | 150 | 101 | 3 | 3 | 150 | 9 | 157 | 2.88e-18 | 80.1 |
| Msa1242110 | AT1G70850.1 | 30.714 | 140 | 94 | 3 | 13 | 150 | 175 | 313 | 9.88e-17 | 75.9 |
| Msa1242110 | AT1G70830.4 | 30.667 | 150 | 101 | 3 | 3 | 150 | 137 | 285 | 2.98e-18 | 79.7 |
| Msa1242110 | AT4G23670.1 | 33.117 | 154 | 98 | 4 | 1 | 152 | 1 | 151 | 4.75e-18 | 76.3 |
| Msa1242110 | AT1G70880.1 | 30.000 | 150 | 102 | 3 | 3 | 150 | 8 | 156 | 4.81e-18 | 76.6 |
| Msa1242110 | AT1G14930.1 | 30.573 | 157 | 106 | 3 | 1 | 156 | 1 | 155 | 9.37e-18 | 75.5 |
| Msa1242110 | AT2G01520.1 | 30.065 | 153 | 104 | 3 | 1 | 152 | 1 | 151 | 1.27e-16 | 72.4 |
| Msa1242110 | AT4G23680.1 | 31.373 | 153 | 100 | 4 | 1 | 151 | 1 | 150 | 1.97e-15 | 69.3 |
| Msa1242110 | AT4G14060.1 | 30.065 | 153 | 104 | 3 | 1 | 152 | 1 | 151 | 4.46e-15 | 68.6 |
| Msa1242110 | AT1G35260.1 | 25.166 | 151 | 109 | 3 | 2 | 150 | 1 | 149 | 1.17e-14 | 67.4 |
| Msa1242110 | AT2G01530.1 | 29.412 | 153 | 105 | 3 | 1 | 152 | 1 | 151 | 1.37e-14 | 67.4 |
| Msa1242110 | AT1G14940.1 | 28.662 | 157 | 109 | 3 | 1 | 156 | 1 | 155 | 2.00e-14 | 67.0 |
| Msa1242110 | AT1G14950.1 | 28.025 | 157 | 110 | 3 | 1 | 156 | 1 | 155 | 3.60e-13 | 63.5 |
| Msa1242110 | AT1G30990.1 | 29.139 | 151 | 103 | 4 | 1 | 150 | 1 | 148 | 6.66e-13 | 62.8 |
| Msa1242110 | AT1G24020.1 | 29.605 | 152 | 105 | 2 | 1 | 151 | 1 | 151 | 1.67e-12 | 62.0 |
| Msa1242110 | AT1G24020.2 | 29.605 | 152 | 105 | 2 | 1 | 151 | 1 | 151 | 1.67e-12 | 62.0 |
| Msa1242110 | AT3G26460.1 | 28.205 | 156 | 104 | 5 | 1 | 152 | 1 | 152 | 2.84e-11 | 58.5 |
Find 34 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAAGCAATTTCTATTTAA+AGG | 0.149474 | 8_2:+26165955 | Msa1242110:five_prime_UTR |
| TGAGCATTATAGGGTCTTTA+AGG | 0.251134 | 8_2:+26168089 | Msa1242110:CDS |
| GAGATATTGATGAGCATTAT+AGG | 0.261538 | 8_2:+26168079 | Msa1242110:CDS |
| AATGGCTACATGGAACATTT+TGG | 0.264766 | 8_2:+26168204 | Msa1242110:CDS |
| GGTAAGCTCAGTACTGAAAT+TGG | 0.267652 | 8_2:+26166069 | Msa1242110:CDS |
| AAGGTCATCCTTGAAGTAAT+TGG | 0.283197 | 8_2:+26168108 | Msa1242110:CDS |
| ATCTTCACCTTCATGAAGTT+TGG | 0.293563 | 8_2:-26166178 | None:intergenic |
| ATGGCACTGCTGCTGCTAAA+TGG | 0.310932 | 8_2:+26168139 | Msa1242110:CDS |
| AGATTGGCATCACTCTGATT+TGG | 0.377978 | 8_2:+26166197 | Msa1242110:CDS |
| CACCCTTACCAATTACTTCA+AGG | 0.403747 | 8_2:-26168116 | None:intergenic |
| TAGGGTTGATATGATGAAAC+TGG | 0.411128 | 8_2:-26165991 | None:intergenic |
| AAATGTTCCATGTAGCCATT+TGG | 0.413070 | 8_2:-26168201 | None:intergenic |
| GAAAGAGAAGAAAGAAAACT+AGG | 0.419011 | 8_2:-26166010 | None:intergenic |
| CACCTTCATGAAGTTTGGTA+TGG | 0.456107 | 8_2:-26166173 | None:intergenic |
| AACACTTATAAGCTCTTTGG+TGG | 0.457999 | 8_2:+26168057 | Msa1242110:CDS |
| TTCTAAGAAATGGTGCTCTC+TGG | 0.461766 | 8_2:+26166048 | Msa1242110:exon |
| AAACACTGGACTTATGTCAT+AGG | 0.470664 | 8_2:+26166222 | Msa1242110:CDS |
| AAAGAGAAGAAAGAAAACTA+GGG | 0.476000 | 8_2:-26166009 | None:intergenic |
| CATCCTTGAAGTAATTGGTA+AGG | 0.479580 | 8_2:+26168113 | Msa1242110:CDS |
| AACTTCATGAAGGTGAAGAT+TGG | 0.483425 | 8_2:+26166181 | Msa1242110:CDS |
| TGACCCTCCAAATGGCTACA+TGG | 0.521176 | 8_2:+26168194 | Msa1242110:CDS |
| GAGGATATTGACCCTCCAAA+TGG | 0.540200 | 8_2:+26168186 | Msa1242110:CDS |
| TGTTCCATGTAGCCATTTGG+AGG | 0.542543 | 8_2:-26168198 | None:intergenic |
| AGATATTGATGAGCATTATA+GGG | 0.551405 | 8_2:+26168080 | Msa1242110:CDS |
| GAAGTAATTGGTAAGGGTGA+TGG | 0.551832 | 8_2:+26168120 | Msa1242110:CDS |
| ACTCTGATTTGGTTAAACAC+TGG | 0.575483 | 8_2:+26166208 | Msa1242110:CDS |
| GTTGATGCTCATCTTGTCAA+AGG | 0.600604 | 8_2:+26168243 | Msa1242110:CDS |
| CACCATACCAAACTTCATGA+AGG | 0.601337 | 8_2:+26166171 | Msa1242110:CDS |
| ATCCTTGAAGTAATTGGTAA+GGG | 0.604058 | 8_2:+26168114 | Msa1242110:CDS |
| ATAATTCACAACAGATGGCA+AGG | 0.621271 | 8_2:+26167984 | Msa1242110:intron |
| GTTCCATGTAGCCATTTGGA+GGG | 0.622662 | 8_2:-26168197 | None:intergenic |
| TAGATTGTAGAACTTATCAG+AGG | 0.623153 | 8_2:-26166103 | None:intergenic |
| AGATTGTAGAACTTATCAGA+GGG | 0.653447 | 8_2:-26166102 | None:intergenic |
| TGAATATGAAAAGATCAATG+AGG | 0.667026 | 8_2:+26168167 | Msa1242110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATCAATTATTTATTAC+TGG | - | chr8_2:26167356-26167375 | None:intergenic | 10.0% |
| !!! | TGCTTTTAATATTTTTTTTA+TGG | - | chr8_2:26167560-26167579 | None:intergenic | 10.0% |
| !!! | ACAATACATATTTAATTTAT+AGG | - | chr8_2:26167791-26167810 | None:intergenic | 10.0% |
| !!! | AGTTTATTTGTTAAAAAAAT+AGG | + | chr8_2:26167891-26167910 | Msa1242110:intron | 10.0% |
| !! | TTATATCAATTATTTATTAC+TGG | - | chr8_2:26167356-26167375 | None:intergenic | 10.0% |
| !!! | TGCTTTTAATATTTTTTTTA+TGG | - | chr8_2:26167560-26167579 | None:intergenic | 10.0% |
| !!! | ACAATACATATTTAATTTAT+AGG | - | chr8_2:26167791-26167810 | None:intergenic | 10.0% |
| !!! | AGTTTATTTGTTAAAAAAAT+AGG | + | chr8_2:26167891-26167910 | Msa1242110:intron | 10.0% |
| !! | ATGATTACAAACTATTAAAA+TGG | - | chr8_2:26166896-26166915 | None:intergenic | 15.0% |
| !!! | AATTTTATTTATGTTACACT+GGG | - | chr8_2:26167299-26167318 | None:intergenic | 15.0% |
| !!! | TAATTTTATTTATGTTACAC+TGG | - | chr8_2:26167300-26167319 | None:intergenic | 15.0% |
| !! | ATAAATAAAATTAACAACAC+TGG | + | chr8_2:26167307-26167326 | Msa1242110:intron | 15.0% |
| !!! | TGTAGTTTTTTTTTTTTTTG+TGG | - | chr8_2:26167491-26167510 | None:intergenic | 15.0% |
| !! | TGTAAGAATTATGAATTATT+TGG | + | chr8_2:26167723-26167742 | Msa1242110:intron | 15.0% |
| !! | GTAAGAATTATGAATTATTT+GGG | + | chr8_2:26167724-26167743 | Msa1242110:intron | 15.0% |
| !! | AATCATATAAAGAATATATG+TGG | + | chr8_2:26167761-26167780 | Msa1242110:intron | 15.0% |
| !! | TCATTAGAAAAAATATTCAT+TGG | + | chr8_2:26167820-26167839 | Msa1242110:intron | 15.0% |
| !!! | AATATAGTAGTTTTCTTTTT+AGG | + | chr8_2:26167855-26167874 | Msa1242110:intron | 15.0% |
| !!! | ATATAGTAGTTTTCTTTTTA+GGG | + | chr8_2:26167856-26167875 | Msa1242110:intron | 15.0% |
| !! | ATGATTACAAACTATTAAAA+TGG | - | chr8_2:26166896-26166915 | None:intergenic | 15.0% |
| !!! | AATTTTATTTATGTTACACT+GGG | - | chr8_2:26167299-26167318 | None:intergenic | 15.0% |
| !!! | TAATTTTATTTATGTTACAC+TGG | - | chr8_2:26167300-26167319 | None:intergenic | 15.0% |
| !! | ATAAATAAAATTAACAACAC+TGG | + | chr8_2:26167307-26167326 | Msa1242110:intron | 15.0% |
| !!! | TGTAGTTTTTTTTTTTTTTG+TGG | - | chr8_2:26167491-26167510 | None:intergenic | 15.0% |
| !! | TGTAAGAATTATGAATTATT+TGG | + | chr8_2:26167723-26167742 | Msa1242110:intron | 15.0% |
| !! | GTAAGAATTATGAATTATTT+GGG | + | chr8_2:26167724-26167743 | Msa1242110:intron | 15.0% |
| !! | AATCATATAAAGAATATATG+TGG | + | chr8_2:26167761-26167780 | Msa1242110:intron | 15.0% |
| !! | TCATTAGAAAAAATATTCAT+TGG | + | chr8_2:26167820-26167839 | Msa1242110:intron | 15.0% |
| !!! | AATATAGTAGTTTTCTTTTT+AGG | + | chr8_2:26167855-26167874 | Msa1242110:intron | 15.0% |
| !!! | ATATAGTAGTTTTCTTTTTA+GGG | + | chr8_2:26167856-26167875 | Msa1242110:intron | 15.0% |
| !! | GTAAAGCAATTTCTATTTAA+AGG | + | chr8_2:26165955-26165974 | Msa1242110:five_prime_UTR | 20.0% |
| !!! | TTTGTTTTACTTCTAAGAAA+TGG | + | chr8_2:26166038-26166057 | Msa1242110:exon | 20.0% |
| !! | AATCATATAAGATGATGATT+TGG | - | chr8_2:26166284-26166303 | None:intergenic | 20.0% |
| !! | CAATCTTTATAGAATTCATT+TGG | - | chr8_2:26166393-26166412 | None:intergenic | 20.0% |
| !! | CAAATGAATTCTATAAAGAT+TGG | + | chr8_2:26166391-26166410 | Msa1242110:intron | 20.0% |
| !! | TAGGTCTTCTATAAAATTAT+GGG | - | chr8_2:26166601-26166620 | None:intergenic | 20.0% |
| !! | TTAGGTCTTCTATAAAATTA+TGG | - | chr8_2:26166602-26166621 | None:intergenic | 20.0% |
| !!! | TTAAAGAGATTTGATTTTGT+AGG | + | chr8_2:26166835-26166854 | Msa1242110:intron | 20.0% |
| !! | TGTACACATCAATAAAAAAT+AGG | + | chr8_2:26166940-26166959 | Msa1242110:intron | 20.0% |
| !! | AATAATCCTCTATAGATATA+AGG | + | chr8_2:26167134-26167153 | Msa1242110:intron | 20.0% |
| !! | TCATAAACTATGTCAATAAT+TGG | + | chr8_2:26167270-26167289 | Msa1242110:intron | 20.0% |
| !!! | AGTTTTTTTTTTTTTTGTGG+TGG | - | chr8_2:26167488-26167507 | None:intergenic | 20.0% |
| !! | GTAAAGCAATTTCTATTTAA+AGG | + | chr8_2:26165955-26165974 | Msa1242110:five_prime_UTR | 20.0% |
| !!! | TTTGTTTTACTTCTAAGAAA+TGG | + | chr8_2:26166038-26166057 | Msa1242110:exon | 20.0% |
| !! | AATCATATAAGATGATGATT+TGG | - | chr8_2:26166284-26166303 | None:intergenic | 20.0% |
| !! | CAATCTTTATAGAATTCATT+TGG | - | chr8_2:26166393-26166412 | None:intergenic | 20.0% |
| !! | CAAATGAATTCTATAAAGAT+TGG | + | chr8_2:26166391-26166410 | Msa1242110:intron | 20.0% |
| !! | TAGGTCTTCTATAAAATTAT+GGG | - | chr8_2:26166601-26166620 | None:intergenic | 20.0% |
| !! | TTAGGTCTTCTATAAAATTA+TGG | - | chr8_2:26166602-26166621 | None:intergenic | 20.0% |
| !!! | TTAAAGAGATTTGATTTTGT+AGG | + | chr8_2:26166835-26166854 | Msa1242110:intron | 20.0% |
| !! | TGTACACATCAATAAAAAAT+AGG | + | chr8_2:26166940-26166959 | Msa1242110:intron | 20.0% |
| !! | AATAATCCTCTATAGATATA+AGG | + | chr8_2:26167134-26167153 | Msa1242110:intron | 20.0% |
| !! | TCATAAACTATGTCAATAAT+TGG | + | chr8_2:26167270-26167289 | Msa1242110:intron | 20.0% |
| !!! | AGTTTTTTTTTTTTTTGTGG+TGG | - | chr8_2:26167488-26167507 | None:intergenic | 20.0% |
| ! | AAAGAGAAGAAAGAAAACTA+GGG | - | chr8_2:26166012-26166031 | None:intergenic | 25.0% |
| ! | CTATACTTCTAACAGAAAAA+AGG | + | chr8_2:26166347-26166366 | Msa1242110:intron | 25.0% |
| ! | TTAATGTTACTGTAGTTGTT+AGG | - | chr8_2:26166620-26166639 | None:intergenic | 25.0% |
| !! | CTTTTGATCTAAAAGATACA+AGG | + | chr8_2:26166668-26166687 | Msa1242110:intron | 25.0% |
| ! | AAAATAGGAAAATACTTGTG+TGG | + | chr8_2:26166955-26166974 | Msa1242110:intron | 25.0% |
| ! | AAAATGTCGAAAATAATCCT+AGG | + | chr8_2:26167201-26167220 | Msa1242110:intron | 25.0% |
| ! | AAAAACACTTATAAGCTCTT+TGG | + | chr8_2:26168054-26168073 | Msa1242110:CDS | 25.0% |
| ! | AGATATTGATGAGCATTATA+GGG | + | chr8_2:26168080-26168099 | Msa1242110:CDS | 25.0% |
| ! | TGAATATGAAAAGATCAATG+AGG | + | chr8_2:26168167-26168186 | Msa1242110:CDS | 25.0% |
| ! | AAAGAGAAGAAAGAAAACTA+GGG | - | chr8_2:26166012-26166031 | None:intergenic | 25.0% |
| ! | CTATACTTCTAACAGAAAAA+AGG | + | chr8_2:26166347-26166366 | Msa1242110:intron | 25.0% |
| ! | TTAATGTTACTGTAGTTGTT+AGG | - | chr8_2:26166620-26166639 | None:intergenic | 25.0% |
| !! | CTTTTGATCTAAAAGATACA+AGG | + | chr8_2:26166668-26166687 | Msa1242110:intron | 25.0% |
| ! | AAAATAGGAAAATACTTGTG+TGG | + | chr8_2:26166955-26166974 | Msa1242110:intron | 25.0% |
| ! | AAAATGTCGAAAATAATCCT+AGG | + | chr8_2:26167201-26167220 | Msa1242110:intron | 25.0% |
| ! | AAAAACACTTATAAGCTCTT+TGG | + | chr8_2:26168054-26168073 | Msa1242110:CDS | 25.0% |
| ! | AGATATTGATGAGCATTATA+GGG | + | chr8_2:26168080-26168099 | Msa1242110:CDS | 25.0% |
| ! | TGAATATGAAAAGATCAATG+AGG | + | chr8_2:26168167-26168186 | Msa1242110:CDS | 25.0% |
| GAAAGAGAAGAAAGAAAACT+AGG | - | chr8_2:26166013-26166032 | None:intergenic | 30.0% | |
| AGATTGTAGAACTTATCAGA+GGG | - | chr8_2:26166105-26166124 | None:intergenic | 30.0% | |
| TAGATTGTAGAACTTATCAG+AGG | - | chr8_2:26166106-26166125 | None:intergenic | 30.0% | |
| !! | TTTGTTGAATGTTAGTTTGC+GGG | - | chr8_2:26166803-26166822 | None:intergenic | 30.0% |
| ! | GTTTGTTGAATGTTAGTTTG+CGG | - | chr8_2:26166804-26166823 | None:intergenic | 30.0% |
| !! | AGAGATTTGATTTTGTAGGA+AGG | + | chr8_2:26166839-26166858 | Msa1242110:intron | 30.0% |
| CGACATAATAACATTTGCAA+AGG | + | chr8_2:26166862-26166881 | Msa1242110:intron | 30.0% | |
| !! | TTTTTAGAGAAAGACTTGTG+TGG | - | chr8_2:26167115-26167134 | None:intergenic | 30.0% |
| AGTCAACCTTATATCTATAG+AGG | - | chr8_2:26167143-26167162 | None:intergenic | 30.0% | |
| !! | ATAGATATAAGGTTGACTTG+TGG | + | chr8_2:26167145-26167164 | Msa1242110:intron | 30.0% |
| CGAAAATAATCCTAGGTATA+AGG | + | chr8_2:26167208-26167227 | Msa1242110:intron | 30.0% | |
| !! | AAAATTAACAACACTGGCTT+TGG | + | chr8_2:26167313-26167332 | Msa1242110:intron | 30.0% |
| CTTCGTAAACTTATCTAAGT+TGG | + | chr8_2:26167416-26167435 | Msa1242110:intron | 30.0% | |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | chr8_2:26167484-26167503 | None:intergenic | 30.0% |
| ! | TAGTGATATTTTGCCATTGT+CGG | - | chr8_2:26167517-26167536 | None:intergenic | 30.0% |
| GAGATATTGATGAGCATTAT+AGG | + | chr8_2:26168079-26168098 | Msa1242110:CDS | 30.0% | |
| ATCCTTGAAGTAATTGGTAA+GGG | + | chr8_2:26168114-26168133 | Msa1242110:CDS | 30.0% | |
| GAAAGAGAAGAAAGAAAACT+AGG | - | chr8_2:26166013-26166032 | None:intergenic | 30.0% | |
| AGATTGTAGAACTTATCAGA+GGG | - | chr8_2:26166105-26166124 | None:intergenic | 30.0% | |
| TAGATTGTAGAACTTATCAG+AGG | - | chr8_2:26166106-26166125 | None:intergenic | 30.0% | |
| !! | TTTGTTGAATGTTAGTTTGC+GGG | - | chr8_2:26166803-26166822 | None:intergenic | 30.0% |
| ! | GTTTGTTGAATGTTAGTTTG+CGG | - | chr8_2:26166804-26166823 | None:intergenic | 30.0% |
| !! | AGAGATTTGATTTTGTAGGA+AGG | + | chr8_2:26166839-26166858 | Msa1242110:intron | 30.0% |
| CGACATAATAACATTTGCAA+AGG | + | chr8_2:26166862-26166881 | Msa1242110:intron | 30.0% | |
| !! | TTTTTAGAGAAAGACTTGTG+TGG | - | chr8_2:26167115-26167134 | None:intergenic | 30.0% |
| AGTCAACCTTATATCTATAG+AGG | - | chr8_2:26167143-26167162 | None:intergenic | 30.0% | |
| !! | ATAGATATAAGGTTGACTTG+TGG | + | chr8_2:26167145-26167164 | Msa1242110:intron | 30.0% |
| CGAAAATAATCCTAGGTATA+AGG | + | chr8_2:26167208-26167227 | Msa1242110:intron | 30.0% | |
| !! | AAAATTAACAACACTGGCTT+TGG | + | chr8_2:26167313-26167332 | Msa1242110:intron | 30.0% |
| CTTCGTAAACTTATCTAAGT+TGG | + | chr8_2:26167416-26167435 | Msa1242110:intron | 30.0% | |
| !!! | TTTTTTTTTTTTGTGGTGGC+CGG | - | chr8_2:26167484-26167503 | None:intergenic | 30.0% |
| ! | TAGTGATATTTTGCCATTGT+CGG | - | chr8_2:26167517-26167536 | None:intergenic | 30.0% |
| GAGATATTGATGAGCATTAT+AGG | + | chr8_2:26168079-26168098 | Msa1242110:CDS | 30.0% | |
| ATCCTTGAAGTAATTGGTAA+GGG | + | chr8_2:26168114-26168133 | Msa1242110:CDS | 30.0% | |
| !! | TAGGGTTGATATGATGAAAC+TGG | - | chr8_2:26165994-26166013 | None:intergenic | 35.0% |
| ATCTTCACCTTCATGAAGTT+TGG | - | chr8_2:26166181-26166200 | None:intergenic | 35.0% | |
| AACTTCATGAAGGTGAAGAT+TGG | + | chr8_2:26166181-26166200 | Msa1242110:CDS | 35.0% | |
| !! | ACTCTGATTTGGTTAAACAC+TGG | + | chr8_2:26166208-26166227 | Msa1242110:CDS | 35.0% |
| AAACACTGGACTTATGTCAT+AGG | + | chr8_2:26166222-26166241 | Msa1242110:CDS | 35.0% | |
| !! | TGATGATTTGGTTATCGATC+AGG | - | chr8_2:26166272-26166291 | None:intergenic | 35.0% |
| GATACATTGAGACTAACCTA+AGG | + | chr8_2:26166413-26166432 | Msa1242110:intron | 35.0% | |
| AAAGAGAAAGAGGTGATTGA+AGG | - | chr8_2:26166714-26166733 | None:intergenic | 35.0% | |
| AAAAGAGTCGAAAGAGAAAG+AGG | - | chr8_2:26166724-26166743 | None:intergenic | 35.0% | |
| ! | TCTCTTTCGACTCTTTTGAA+CGG | + | chr8_2:26166727-26166746 | Msa1242110:intron | 35.0% |
| !! | TTTGGCATGAGATTTTCAAG+TGG | - | chr8_2:26166776-26166795 | None:intergenic | 35.0% |
| CTTGAAAATCTCATGCCAAA+TGG | + | chr8_2:26166776-26166795 | Msa1242110:intron | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr8_2:26167027-26167046 | Msa1242110:intron | 35.0% | |
| ACAAGTCAAACCTTATACCT+AGG | - | chr8_2:26167221-26167240 | None:intergenic | 35.0% | |
| !! | TAGGTATAAGGTTTGACTTG+TGG | + | chr8_2:26167220-26167239 | Msa1242110:intron | 35.0% |
| !! | TATAAGGTTTGACTTGTGGT+TGG | + | chr8_2:26167224-26167243 | Msa1242110:intron | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | chr8_2:26167483-26167502 | None:intergenic | 35.0% |
| AAAAACTACACAACCGACAA+TGG | + | chr8_2:26167501-26167520 | Msa1242110:intron | 35.0% | |
| TGTTGTGAATTATGATGGCA+CGG | - | chr8_2:26167977-26167996 | None:intergenic | 35.0% | |
| CCATCTGTTGTGAATTATGA+TGG | - | chr8_2:26167982-26168001 | None:intergenic | 35.0% | |
| CCATCATAATTCACAACAGA+TGG | + | chr8_2:26167979-26167998 | Msa1242110:intron | 35.0% | |
| ATAATTCACAACAGATGGCA+AGG | + | chr8_2:26167984-26168003 | Msa1242110:intron | 35.0% | |
| AACACTTATAAGCTCTTTGG+TGG | + | chr8_2:26168057-26168076 | Msa1242110:CDS | 35.0% | |
| TGAGCATTATAGGGTCTTTA+AGG | + | chr8_2:26168089-26168108 | Msa1242110:CDS | 35.0% | |
| AAGGTCATCCTTGAAGTAAT+TGG | + | chr8_2:26168108-26168127 | Msa1242110:CDS | 35.0% | |
| CATCCTTGAAGTAATTGGTA+AGG | + | chr8_2:26168113-26168132 | Msa1242110:CDS | 35.0% | |
| AAATGTTCCATGTAGCCATT+TGG | - | chr8_2:26168204-26168223 | None:intergenic | 35.0% | |
| ! | AATGGCTACATGGAACATTT+TGG | + | chr8_2:26168204-26168223 | Msa1242110:CDS | 35.0% |
| !! | TAGGGTTGATATGATGAAAC+TGG | - | chr8_2:26165994-26166013 | None:intergenic | 35.0% |
| ATCTTCACCTTCATGAAGTT+TGG | - | chr8_2:26166181-26166200 | None:intergenic | 35.0% | |
| AACTTCATGAAGGTGAAGAT+TGG | + | chr8_2:26166181-26166200 | Msa1242110:CDS | 35.0% | |
| !! | ACTCTGATTTGGTTAAACAC+TGG | + | chr8_2:26166208-26166227 | Msa1242110:CDS | 35.0% |
| AAACACTGGACTTATGTCAT+AGG | + | chr8_2:26166222-26166241 | Msa1242110:CDS | 35.0% | |
| !! | TGATGATTTGGTTATCGATC+AGG | - | chr8_2:26166272-26166291 | None:intergenic | 35.0% |
| GATACATTGAGACTAACCTA+AGG | + | chr8_2:26166413-26166432 | Msa1242110:intron | 35.0% | |
| AAAGAGAAAGAGGTGATTGA+AGG | - | chr8_2:26166714-26166733 | None:intergenic | 35.0% | |
| AAAAGAGTCGAAAGAGAAAG+AGG | - | chr8_2:26166724-26166743 | None:intergenic | 35.0% | |
| ! | TCTCTTTCGACTCTTTTGAA+CGG | + | chr8_2:26166727-26166746 | Msa1242110:intron | 35.0% |
| !! | TTTGGCATGAGATTTTCAAG+TGG | - | chr8_2:26166776-26166795 | None:intergenic | 35.0% |
| CTTGAAAATCTCATGCCAAA+TGG | + | chr8_2:26166776-26166795 | Msa1242110:intron | 35.0% | |
| AAGAGAGAAGAGAGAGAAAA+TGG | + | chr8_2:26167027-26167046 | Msa1242110:intron | 35.0% | |
| ACAAGTCAAACCTTATACCT+AGG | - | chr8_2:26167221-26167240 | None:intergenic | 35.0% | |
| !! | TAGGTATAAGGTTTGACTTG+TGG | + | chr8_2:26167220-26167239 | Msa1242110:intron | 35.0% |
| !! | TATAAGGTTTGACTTGTGGT+TGG | + | chr8_2:26167224-26167243 | Msa1242110:intron | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+GGG | - | chr8_2:26167483-26167502 | None:intergenic | 35.0% |
| AAAAACTACACAACCGACAA+TGG | + | chr8_2:26167501-26167520 | Msa1242110:intron | 35.0% | |
| TGTTGTGAATTATGATGGCA+CGG | - | chr8_2:26167977-26167996 | None:intergenic | 35.0% | |
| CCATCTGTTGTGAATTATGA+TGG | - | chr8_2:26167982-26168001 | None:intergenic | 35.0% | |
| CCATCATAATTCACAACAGA+TGG | + | chr8_2:26167979-26167998 | Msa1242110:intron | 35.0% | |
| ATAATTCACAACAGATGGCA+AGG | + | chr8_2:26167984-26168003 | Msa1242110:intron | 35.0% | |
| AACACTTATAAGCTCTTTGG+TGG | + | chr8_2:26168057-26168076 | Msa1242110:CDS | 35.0% | |
| TGAGCATTATAGGGTCTTTA+AGG | + | chr8_2:26168089-26168108 | Msa1242110:CDS | 35.0% | |
| AAGGTCATCCTTGAAGTAAT+TGG | + | chr8_2:26168108-26168127 | Msa1242110:CDS | 35.0% | |
| CATCCTTGAAGTAATTGGTA+AGG | + | chr8_2:26168113-26168132 | Msa1242110:CDS | 35.0% | |
| AAATGTTCCATGTAGCCATT+TGG | - | chr8_2:26168204-26168223 | None:intergenic | 35.0% | |
| ! | AATGGCTACATGGAACATTT+TGG | + | chr8_2:26168204-26168223 | Msa1242110:CDS | 35.0% |
| ! | TTCTAAGAAATGGTGCTCTC+TGG | + | chr8_2:26166048-26166067 | Msa1242110:exon | 40.0% |
| ! | GGTAAGCTCAGTACTGAAAT+TGG | + | chr8_2:26166069-26166088 | Msa1242110:CDS | 40.0% |
| CACCATACCAAACTTCATGA+AGG | + | chr8_2:26166171-26166190 | Msa1242110:CDS | 40.0% | |
| CACCTTCATGAAGTTTGGTA+TGG | - | chr8_2:26166176-26166195 | None:intergenic | 40.0% | |
| AGATTGGCATCACTCTGATT+TGG | + | chr8_2:26166197-26166216 | Msa1242110:CDS | 40.0% | |
| ATACTTCAGTGCCATAGCAA+TGG | - | chr8_2:26166575-26166594 | None:intergenic | 40.0% | |
| AGAAAGAGGTGATTGAAGGA+GGG | - | chr8_2:26166710-26166729 | None:intergenic | 40.0% | |
| !!! | AGATTTTCAAGTGGAAGGCT+GGG | - | chr8_2:26166767-26166786 | None:intergenic | 40.0% |
| !!! | GCATGAGATTTTCAAGTGGA+AGG | - | chr8_2:26166772-26166791 | None:intergenic | 40.0% |
| GAAAATACTTGTGTGGACCA+AGG | + | chr8_2:26166962-26166981 | Msa1242110:intron | 40.0% | |
| TTTGGTTGTGACCACACAAT+GGG | - | chr8_2:26166995-26167014 | None:intergenic | 40.0% | |
| TGTGGTCACAACCAAAGAAA+TGG | + | chr8_2:26166999-26167018 | Msa1242110:intron | 40.0% | |
| GTGGTCACAACCAAAGAAAT+GGG | + | chr8_2:26167000-26167019 | Msa1242110:intron | 40.0% | |
| TCTCTTCTCTCCCATTTCTT+TGG | - | chr8_2:26167013-26167032 | None:intergenic | 40.0% | |
| CATTATACATGCAACGTCCA+GGG | + | chr8_2:26167450-26167469 | Msa1242110:intron | 40.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | chr8_2:26167482-26167501 | None:intergenic | 40.0% |
| GTTGTGAATTATGATGGCAC+GGG | - | chr8_2:26167976-26167995 | None:intergenic | 40.0% | |
| CACCCTTACCAATTACTTCA+AGG | - | chr8_2:26168119-26168138 | None:intergenic | 40.0% | |
| GAAGTAATTGGTAAGGGTGA+TGG | + | chr8_2:26168120-26168139 | Msa1242110:CDS | 40.0% | |
| GTTGATGCTCATCTTGTCAA+AGG | + | chr8_2:26168243-26168262 | Msa1242110:CDS | 40.0% | |
| ! | TTCTAAGAAATGGTGCTCTC+TGG | + | chr8_2:26166048-26166067 | Msa1242110:exon | 40.0% |
| ! | GGTAAGCTCAGTACTGAAAT+TGG | + | chr8_2:26166069-26166088 | Msa1242110:CDS | 40.0% |
| CACCATACCAAACTTCATGA+AGG | + | chr8_2:26166171-26166190 | Msa1242110:CDS | 40.0% | |
| CACCTTCATGAAGTTTGGTA+TGG | - | chr8_2:26166176-26166195 | None:intergenic | 40.0% | |
| AGATTGGCATCACTCTGATT+TGG | + | chr8_2:26166197-26166216 | Msa1242110:CDS | 40.0% | |
| ATACTTCAGTGCCATAGCAA+TGG | - | chr8_2:26166575-26166594 | None:intergenic | 40.0% | |
| AGAAAGAGGTGATTGAAGGA+GGG | - | chr8_2:26166710-26166729 | None:intergenic | 40.0% | |
| !!! | AGATTTTCAAGTGGAAGGCT+GGG | - | chr8_2:26166767-26166786 | None:intergenic | 40.0% |
| !!! | GCATGAGATTTTCAAGTGGA+AGG | - | chr8_2:26166772-26166791 | None:intergenic | 40.0% |
| GAAAATACTTGTGTGGACCA+AGG | + | chr8_2:26166962-26166981 | Msa1242110:intron | 40.0% | |
| TTTGGTTGTGACCACACAAT+GGG | - | chr8_2:26166995-26167014 | None:intergenic | 40.0% | |
| TGTGGTCACAACCAAAGAAA+TGG | + | chr8_2:26166999-26167018 | Msa1242110:intron | 40.0% | |
| GTGGTCACAACCAAAGAAAT+GGG | + | chr8_2:26167000-26167019 | Msa1242110:intron | 40.0% | |
| TCTCTTCTCTCCCATTTCTT+TGG | - | chr8_2:26167013-26167032 | None:intergenic | 40.0% | |
| CATTATACATGCAACGTCCA+GGG | + | chr8_2:26167450-26167469 | Msa1242110:intron | 40.0% | |
| !!! | TTTTTTTTTTGTGGTGGCCG+GGG | - | chr8_2:26167482-26167501 | None:intergenic | 40.0% |
| GTTGTGAATTATGATGGCAC+GGG | - | chr8_2:26167976-26167995 | None:intergenic | 40.0% | |
| CACCCTTACCAATTACTTCA+AGG | - | chr8_2:26168119-26168138 | None:intergenic | 40.0% | |
| GAAGTAATTGGTAAGGGTGA+TGG | + | chr8_2:26168120-26168139 | Msa1242110:CDS | 40.0% | |
| GTTGATGCTCATCTTGTCAA+AGG | + | chr8_2:26168243-26168262 | Msa1242110:CDS | 40.0% | |
| CTAACCTAAGGACTCCACTT+TGG | + | chr8_2:26166425-26166444 | Msa1242110:intron | 45.0% | |
| !! | CTCCACTTTGGTGCCATTAA+TGG | + | chr8_2:26166437-26166456 | Msa1242110:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | - | chr8_2:26166442-26166461 | None:intergenic | 45.0% | |
| !! | ATGCAATGGTATGGTGCCAT+TGG | - | chr8_2:26166465-26166484 | None:intergenic | 45.0% |
| TGATGTGTGTGGATGTGTGT+GGG | - | chr8_2:26166519-26166538 | None:intergenic | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | - | chr8_2:26166520-26166539 | None:intergenic | 45.0% | |
| CACACATCCACACACATCAA+CGG | + | chr8_2:26166520-26166539 | Msa1242110:intron | 45.0% | |
| !! | GATTGGTTCTATGGCACCAA+TGG | + | chr8_2:26166547-26166566 | Msa1242110:intron | 45.0% |
| GAGAAAGAGGTGATTGAAGG+AGG | - | chr8_2:26166711-26166730 | None:intergenic | 45.0% | |
| !!! | GAGATTTTCAAGTGGAAGGC+TGG | - | chr8_2:26166768-26166787 | None:intergenic | 45.0% |
| !! | TGTTAGTTTGCGGGACCATT+TGG | - | chr8_2:26166794-26166813 | None:intergenic | 45.0% |
| TTGGTTGTGACCACACAATG+GGG | - | chr8_2:26166994-26167013 | None:intergenic | 45.0% | |
| CTTTGGTTGTGACCACACAA+TGG | - | chr8_2:26166996-26167015 | None:intergenic | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | + | chr8_2:26167082-26167101 | Msa1242110:intron | 45.0% | |
| TGGATCAGGACCACACAATT+GGG | - | chr8_2:26167095-26167114 | None:intergenic | 45.0% | |
| GAGAAAGACTTGTGTGGATC+AGG | - | chr8_2:26167109-26167128 | None:intergenic | 45.0% | |
| GCATTATACATGCAACGTCC+AGG | + | chr8_2:26167449-26167468 | Msa1242110:intron | 45.0% | |
| GAGGATATTGACCCTCCAAA+TGG | + | chr8_2:26168186-26168205 | Msa1242110:CDS | 45.0% | |
| GTTCCATGTAGCCATTTGGA+GGG | - | chr8_2:26168200-26168219 | None:intergenic | 45.0% | |
| TGTTCCATGTAGCCATTTGG+AGG | - | chr8_2:26168201-26168220 | None:intergenic | 45.0% | |
| CTAACCTAAGGACTCCACTT+TGG | + | chr8_2:26166425-26166444 | Msa1242110:intron | 45.0% | |
| !! | CTCCACTTTGGTGCCATTAA+TGG | + | chr8_2:26166437-26166456 | Msa1242110:intron | 45.0% |
| TGCCATTAATGGCACCAAAG+TGG | - | chr8_2:26166442-26166461 | None:intergenic | 45.0% | |
| !! | ATGCAATGGTATGGTGCCAT+TGG | - | chr8_2:26166465-26166484 | None:intergenic | 45.0% |
| TGATGTGTGTGGATGTGTGT+GGG | - | chr8_2:26166519-26166538 | None:intergenic | 45.0% | |
| TTGATGTGTGTGGATGTGTG+TGG | - | chr8_2:26166520-26166539 | None:intergenic | 45.0% | |
| CACACATCCACACACATCAA+CGG | + | chr8_2:26166520-26166539 | Msa1242110:intron | 45.0% | |
| !! | GATTGGTTCTATGGCACCAA+TGG | + | chr8_2:26166547-26166566 | Msa1242110:intron | 45.0% |
| GAGAAAGAGGTGATTGAAGG+AGG | - | chr8_2:26166711-26166730 | None:intergenic | 45.0% | |
| !!! | GAGATTTTCAAGTGGAAGGC+TGG | - | chr8_2:26166768-26166787 | None:intergenic | 45.0% |
| !! | TGTTAGTTTGCGGGACCATT+TGG | - | chr8_2:26166794-26166813 | None:intergenic | 45.0% |
| TTGGTTGTGACCACACAATG+GGG | - | chr8_2:26166994-26167013 | None:intergenic | 45.0% | |
| CTTTGGTTGTGACCACACAA+TGG | - | chr8_2:26166996-26167015 | None:intergenic | 45.0% | |
| TGTGACCAAACCCAATTGTG+TGG | + | chr8_2:26167082-26167101 | Msa1242110:intron | 45.0% | |
| TGGATCAGGACCACACAATT+GGG | - | chr8_2:26167095-26167114 | None:intergenic | 45.0% | |
| GAGAAAGACTTGTGTGGATC+AGG | - | chr8_2:26167109-26167128 | None:intergenic | 45.0% | |
| GCATTATACATGCAACGTCC+AGG | + | chr8_2:26167449-26167468 | Msa1242110:intron | 45.0% | |
| GAGGATATTGACCCTCCAAA+TGG | + | chr8_2:26168186-26168205 | Msa1242110:CDS | 45.0% | |
| GTTCCATGTAGCCATTTGGA+GGG | - | chr8_2:26168200-26168219 | None:intergenic | 45.0% | |
| TGTTCCATGTAGCCATTTGG+AGG | - | chr8_2:26168201-26168220 | None:intergenic | 45.0% | |
| !! | GGTGCCATTAATGGCACCAA+TGG | + | chr8_2:26166446-26166465 | Msa1242110:intron | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | - | chr8_2:26166453-26166472 | None:intergenic | 50.0% |
| ! | GTGGTGGAGATGCAATGGTA+TGG | - | chr8_2:26166474-26166493 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | - | chr8_2:26166479-26166498 | None:intergenic | 50.0% |
| TGTGTGATGTGTGTGTGTGG+TGG | - | chr8_2:26166490-26166509 | None:intergenic | 50.0% | |
| GTGTGTGTGATGTGTGTGTG+TGG | - | chr8_2:26166493-26166512 | None:intergenic | 50.0% | |
| GATGTGTGTGGATGTGTGTG+GGG | - | chr8_2:26166518-26166537 | None:intergenic | 50.0% | |
| !! | AACGGCCAGGATTGGTTCTA+TGG | + | chr8_2:26166538-26166557 | Msa1242110:intron | 50.0% |
| !! | TGGTGCCATAGAACCAATCC+TGG | - | chr8_2:26166546-26166565 | None:intergenic | 50.0% |
| CACCAATGGCACCATTGCTA+TGG | + | chr8_2:26166561-26166580 | Msa1242110:intron | 50.0% | |
| !! | TGCCATAGCAATGGTGCCAT+TGG | - | chr8_2:26166566-26166585 | None:intergenic | 50.0% |
| ! | ACACAATGGGGTTTGGTCCT+TGG | - | chr8_2:26166982-26167001 | None:intergenic | 50.0% |
| AAGGACCAAACCCCATTGTG+TGG | + | chr8_2:26166981-26167000 | Msa1242110:intron | 50.0% | |
| TGTGACCACACAATGGGGTT+TGG | - | chr8_2:26166989-26167008 | None:intergenic | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | - | chr8_2:26167090-26167109 | None:intergenic | 50.0% | |
| GTGGATCAGGACCACACAAT+TGG | - | chr8_2:26167096-26167115 | None:intergenic | 50.0% | |
| ATGGCACTGCTGCTGCTAAA+TGG | + | chr8_2:26168139-26168158 | Msa1242110:CDS | 50.0% | |
| TGACCCTCCAAATGGCTACA+TGG | + | chr8_2:26168194-26168213 | Msa1242110:CDS | 50.0% | |
| !! | GGTGCCATTAATGGCACCAA+TGG | + | chr8_2:26166446-26166465 | Msa1242110:intron | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | - | chr8_2:26166453-26166472 | None:intergenic | 50.0% |
| ! | GTGGTGGAGATGCAATGGTA+TGG | - | chr8_2:26166474-26166493 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | - | chr8_2:26166479-26166498 | None:intergenic | 50.0% |
| TGTGTGATGTGTGTGTGTGG+TGG | - | chr8_2:26166490-26166509 | None:intergenic | 50.0% | |
| GTGTGTGTGATGTGTGTGTG+TGG | - | chr8_2:26166493-26166512 | None:intergenic | 50.0% | |
| GATGTGTGTGGATGTGTGTG+GGG | - | chr8_2:26166518-26166537 | None:intergenic | 50.0% | |
| !! | AACGGCCAGGATTGGTTCTA+TGG | + | chr8_2:26166538-26166557 | Msa1242110:intron | 50.0% |
| !! | TGGTGCCATAGAACCAATCC+TGG | - | chr8_2:26166546-26166565 | None:intergenic | 50.0% |
| CACCAATGGCACCATTGCTA+TGG | + | chr8_2:26166561-26166580 | Msa1242110:intron | 50.0% | |
| !! | TGCCATAGCAATGGTGCCAT+TGG | - | chr8_2:26166566-26166585 | None:intergenic | 50.0% |
| ! | ACACAATGGGGTTTGGTCCT+TGG | - | chr8_2:26166982-26167001 | None:intergenic | 50.0% |
| AAGGACCAAACCCCATTGTG+TGG | + | chr8_2:26166981-26167000 | Msa1242110:intron | 50.0% | |
| TGTGACCACACAATGGGGTT+TGG | - | chr8_2:26166989-26167008 | None:intergenic | 50.0% | |
| CAGGACCACACAATTGGGTT+TGG | - | chr8_2:26167090-26167109 | None:intergenic | 50.0% | |
| GTGGATCAGGACCACACAAT+TGG | - | chr8_2:26167096-26167115 | None:intergenic | 50.0% | |
| ATGGCACTGCTGCTGCTAAA+TGG | + | chr8_2:26168139-26168158 | Msa1242110:CDS | 50.0% | |
| TGACCCTCCAAATGGCTACA+TGG | + | chr8_2:26168194-26168213 | Msa1242110:CDS | 50.0% | |
| GGCACCAAAGTGGAGTCCTT+AGG | - | chr8_2:26166432-26166451 | None:intergenic | 55.0% | |
| ATCCACACACATCAACGGCC+AGG | + | chr8_2:26166525-26166544 | Msa1242110:intron | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+TGG | - | chr8_2:26166530-26166549 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | + | chr8_2:26166530-26166549 | Msa1242110:intron | 55.0% | |
| AACGTCCAGGGTTCAAACCC+CGG | + | chr8_2:26167462-26167481 | Msa1242110:intron | 55.0% | |
| GGCACCAAAGTGGAGTCCTT+AGG | - | chr8_2:26166432-26166451 | None:intergenic | 55.0% | |
| ATCCACACACATCAACGGCC+AGG | + | chr8_2:26166525-26166544 | Msa1242110:intron | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+TGG | - | chr8_2:26166530-26166549 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | + | chr8_2:26166530-26166549 | Msa1242110:intron | 55.0% | |
| AACGTCCAGGGTTCAAACCC+CGG | + | chr8_2:26167462-26167481 | Msa1242110:intron | 55.0% | |
| GGTGGCCGGGGTTTGAACCC+TGG | - | chr8_2:26167470-26167489 | None:intergenic | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+TGG | - | chr8_2:26167470-26167489 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 26165944 | 26168284 | 26165944 | ID=Msa1242110;Name=Msa1242110 |
| chr8_2 | mRNA | 26165944 | 26168284 | 26165944 | ID=Msa1242110-mRNA-1;Parent=Msa1242110;Name=Msa1242110-mRNA-1;_AED=0.33;_eAED=0.33;_QI=113|1|0.5|1|1|1|2|0|157 |
| chr8_2 | exon | 26165944 | 26166243 | 26165944 | ID=Msa1242110-mRNA-1:exon:9220;Parent=Msa1242110-mRNA-1 |
| chr8_2 | exon | 26167998 | 26168284 | 26167998 | ID=Msa1242110-mRNA-1:exon:9221;Parent=Msa1242110-mRNA-1 |
| chr8_2 | five_prime_UTR | 26165944 | 26166056 | 26165944 | ID=Msa1242110-mRNA-1:five_prime_utr;Parent=Msa1242110-mRNA-1 |
| chr8_2 | CDS | 26166057 | 26166243 | 26166057 | ID=Msa1242110-mRNA-1:cds;Parent=Msa1242110-mRNA-1 |
| chr8_2 | CDS | 26167998 | 26168284 | 26167998 | ID=Msa1242110-mRNA-1:cds;Parent=Msa1242110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
